Citrus Sinensis ID: 038002

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700--
Protein Sequence
MASVSVALILLFTVSEIIRAAQNHQLKSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYCSTSTNISTKGDCHCFRGFNFINPKMKFLGCYRNFSDEEGCKRKMPAEFYNITSLKITWLGGLPYAKLSVSKKDCSKSCLNDCYFGAAFYSDGACSKHKFPLMFATKDQYASAILFIKWSSGQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPPLSHVNSLSH
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEcccEEEEEEEEccccEEEEEEEEccccccEEEEEcccccccccccEEEEEccccEEEEccccccEEEccccccccEEEEEEcccccEEEEcccccEEccccccccccccccccccccccEEEcccccccccccEEEEEEEcccEEEEEccccccccccEEEEccccccccccEEEEEEcccccEEEEEccccEEEEEEEccccccccccEEEEEEEcccccEEEEEEEEcccccccEEEEEcccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccEEEEEEEEEccccccccccccccHHHHHHHcccccEEEEEEEccccEEEEcccccccccccHHHHHHHHHccccccccccccccccccccccccccEEEEEEEcccccEEEEEEEEEEEEEEEEEcccccEEEEEEccccccHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccccccccccccccccccccccccEEEEEcccccccccHHHccccccccccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHcHHHHHHHHccccccccEEcccccEEEccccEEEEEEEcccccEEEEEEEEEccccEEEEEEccccccccccEEEEEccccEEEEEcccccEEEEEcccccccccHHEEcccccEEEEcccccEEEEcccccccccccccccccccEEEccccccccccccEEEEEccccccccccEEEEEcccEEEEEccccccEEEccccccccccccEEEEEEEEcccccccEEEEEEEEccccEEEEEEEccccEEEEEEEEEccccccEEEEEEEccccccccHcccccccccccccccccccccccccccccccHHHHcHccccccccccccEEcccccEEEEccccccccccEEEEEccccHHHHHHHHHHccccEEEEcccccEEEEcccHHHHHHcccccccEEEEccccccccccccccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccHHHHEEcccccccHHHHHHHHHHHHHHHHHHHHccHccEEcccccHHHEEEcccccEEEccccccEEcccccEEcccccccccccccHHHHHHcEEcHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHccccHHHccccccHHHHHHHHHHHHHHHcccccccccHHHEEEEccccccccccccccEEEEccccc
Coil and Loop (DISEMBL)
MASVSVALILLFTVSEIIRAAQNHQLKstislgsslspsgqhswnsssglfqfgfykqgsgysLGIWlvtspnitvvwtanrdeqpmpsnatLALTMDGKLilkteeskekpiadlvfdepasfasmldsgnfvlysnrsgiiwesfstptdtilggqslenGEHLLSSVtetnsstgRFCLNmqedgnivlypRNMLNKALEAYWangtdiqseypysvklnlspngvlqllsgnktqkilFRSSYSLKSMNETVIYRTTLDSDGILRLYSHhfkndgnstvGIEWSALEKQCVvkgfcglnsycststnistkgdchcfrgfnfinpkmkflgcyrnfsdeegckrkmpaefynitslkitwlgglpyaklsvskkdcsksclndcyfgaafysdgacskhkfplmfaTKDQYASAILFIKWssgqanlsthriappigndkvndKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLrniliddswrakisdfglakllmpnqtgivagvrgsrgymapewqnsglitvksdvYSFGVVLLEIICCrsnfevnvsTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLlciqdepnlrpsMKNVILMLEgtmeipilafpplshvnslsh
Flexible Loop (DISEMBL)
MASVSVALILLFTVSEIIRAAQNHQLKSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSsyslksmneTVIYRTTLDSDGILRLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYCSTSTNISTKGDCHCFRGFNFINPKMKFLGCYRNFSDEEGCKRKMPAEFYNITSLKITWLGGLPYAKLSVSKKDCSKSCLNDCYFGAAFYSDGACSKHKFPLMFATKDQYASAILFIKWSSGQANLSTHRiappigndkvnDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNletrplwrDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFglakllmpnqTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGllciqdepnlrpSMKNVILMLEGTMEIPilafpplshvnslsh
Low Complexity Region (SEG)
MASVSVALILLFTVSEIIRAAQNHQLKstislgsslspsgqhsWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYCSTSTNISTKGDCHCFRGFNFINPKMKFLGCYRNFSDEEGCKRKMPAEFYNITSLKITWLGGLPYAKLSVSKKDCSKSCLNDCYFGAAFYSDGACSKHKFPLMFATKDQYASAILFIKWSSGQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPPLSHVNSLSH
Disordered region (IsUnstruct)
****SVALILLFTVSEIIRAAQNH***********************SGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTAN***********LALTMDGKLIL*********IADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQ******************TGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYCSTSTNISTKGDCHCFRGFNFINPKMKFLGCYRNFSDEEGCKRKMPAEFYNITSLKITWLGGLPYAKLSVSKKDCSKSCLNDCYFGAAFYSDGACSKHKFPLMFATKDQYASAILFIKWSSGQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPP*********
Disordered Region (DISOPRED)
**SVSVALILLFTVSEIIRAAQNHQLKSTISL****S*****SWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFD**ASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLS****TNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYCSTSTNISTKGDCHCFRGFNFINP*MK*********************FYNITSLKITWLGGLPYAKLSVSKKDCSKSCLNDCYFGAAFYSDGACSKHKFPLMFATKDQYASAILFIKWSSGQANLST*****************LLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICC**************LLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILA************
Disordered Region (DISEMBL)
MASVSVALILLFTVSEIIRAAQNHQLKSTISL************NSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYCSTSTNISTKGDCHCFRGFNFINPKMKFLGCYRNFSDEEGCKRKMPAEFYNITSLKITWLGGLPYAKLSVSKKDCSKSCLNDCYFGAAFYSDGACSKHKFPLMFATKDQYASAILFIKWSSGQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPPLSHVNSLSH
Disordered Region (DISPRO)
*ASVSVALILLFTVSEIIRAAQNHQLKSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYCSTSTNISTKGDCHCFRGFNFINPKMKFLGCYRNFSDEEGCKRKMPAEFYNITSLKITWLGGLPYAKLSVSKKDCSKSCLNDCYFGAAFYSDGACSKHKFPLMFATKDQYASAILFIKWSSGQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPPLSHVN****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASVSVALILLFTVSEIIRAAQNHQLKSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYCSTSTNISTKGDCHCFRGFNFINPKMKFLGCYRNFSDEEGCKRKMPAEFYNITSLKITWLGGLPYAKLSVSKKDCSKSCLNDCYFGAAFYSDGACSKHKFPLMFATKDQYASAILFIKWSSGQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPPLSHVNSLSH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	702	2.2.26 [Sep-21-2011]
Q39202	832	G-type lectin S-receptor-	yes	no	0.296	0.25	0.474	8e-56
Q9XID3	829	G-type lectin S-receptor-	no	no	0.301	0.255	0.454	3e-47
Q8RWZ5	821	G-type lectin S-receptor-	no	no	0.407	0.348	0.354	8e-45
Q9FLV4	872	G-type lectin S-receptor-	no	no	0.306	0.246	0.422	3e-43
C0LGH3	1033	Probable LRR receptor-lik	no	no	0.356	0.242	0.383	3e-41
O64477	828	G-type lectin S-receptor-	no	no	0.297	0.252	0.432	2e-40
C0LGH2	1032	Probable LRR receptor-lik	no	no	0.346	0.235	0.393	3e-40
Q39203	797	G-type lectin S-receptor-	no	no	0.283	0.249	0.426	1e-39
O65238	872	G-type lectin S-receptor-	no	no	0.310	0.25	0.389	3e-39
Q9LFS4	638	Protein NSP-INTERACTING K	no	no	0.282	0.310	0.401	1e-38

>sp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2

 Score =  219 bits (557), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 103/217 (47%), Positives = 148/217 (68%), Gaps = 9/217 (4%)

Query: 474 LLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ 533
           L+ + +    +++VYEF+ +G+LA+ LF    RP W DR  IA+ +ARG+LYLH+EC  Q
Sbjct: 594 LIGFCNEGQSQMIVYEFLPQGTLANFLFR-RPRPSWEDRKNIAVAIARGILYLHEECSEQ 652

Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
           IIHCDIK +NIL+D+ +  +ISDFGLAKLL+ NQT  +  +RG++GY+APEW  +  IT 
Sbjct: 653 IIHCDIKPQNILLDEYYTPRISDFGLAKLLLMNQTYTLTNIRGTKGYVAPEWFRNSPITS 712

Query: 594 KSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI--- 650
           K DVYS+GV+LLEI+CC+      V   D V+L  W Y+CF  G    L E++ + +   
Sbjct: 713 KVDVYSYGVMLLEIVCCKK----AVDLEDNVILINWAYDCFRQGRLEDLTEDDSEAMNDM 768

Query: 651 -TLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEI 686
            T+ER VK  + CIQ+E  +RP+M+NV  MLEG +++
Sbjct: 769 ETVERYVKIAIWCIQEEHGMRPNMRNVTQMLEGVIQV 805

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana GN=At1g34300 PE=1 SV=1

 Score =  190 bits (483), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 101/222 (45%), Positives = 138/222 (62%), Gaps = 10/222 (4%)

Query: 474 LLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPL--WRDRVRIALDVARGLLYLHDECE 531
           L+ +  +   +LLVYEFM  GSL + LF  ++     W  R  IAL  A+G+ YLH+EC 
Sbjct: 542 LIGFCSQGRHRLLVYEFMRNGSLDNFLFTTDSAKFLTWEYRFNIALGTAKGITYLHEECR 601

Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGL 590
             I+HCDIK  NIL+DD++ AK+SDFGLAKLL P      ++ VRG+RGY+APEW  +  
Sbjct: 602 DCIVHCDIKPENILVDDNFAAKVSDFGLAKLLNPKDNRYNMSSVRGTRGYLAPEWLANLP 661

Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV------E 644
           IT KSDVYS+G+VLLE++  + NF+V+  T +    S W Y  F  G    ++      +
Sbjct: 662 ITSKSDVYSYGMVLLELVSGKRNFDVSEKT-NHKKFSIWAYEEFEKGNTKAILDTRLSED 720

Query: 645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEI 686
           + VD   + RMVKT   CIQ++P  RP+M  V+ MLEG  EI
Sbjct: 721 QTVDMEQVMRMVKTSFWCIQEQPLQRPTMGKVVQMLEGITEI 762

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1

 Score =  182 bits (462), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 172/310 (55%), Gaps = 24/310 (7%)

Query: 406 PLMFATKD-QYASAILFIKWSSGQANLSTHRIAPPIGN-------DKVNDKRKLLTVLAG 457
           P+ FA KD Q A+    +K   G    S +    P G+       + +   +K       
Sbjct: 480 PIRFAYKDLQSATNNFSVKLGQGGFG-SVYEGTLPDGSRLAVKKLEGIGQGKKEFRAEVS 538

Query: 458 CLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPL---WRDRVR 514
            +GSI  L  +     L  +    + +LL YEF+SKGSL   +F  +   +   W  R  
Sbjct: 539 IIGSIHHLHLV----RLRGFCAEGAHRLLAYEFLSKGSLERWIFRKKDGDVLLDWDTRFN 594

Query: 515 IALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGV 574
           IAL  A+GL YLH++C+ +I+HCDIK  NIL+DD++ AK+SDFGLAKL+   Q+ +   +
Sbjct: 595 IALGTAKGLAYLHEDCDARIVHCDIKPENILLDDNFNAKVSDFGLAKLMTREQSHVFTTM 654

Query: 575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
           RG+RGY+APEW  +  I+ KSDVYS+G+VLLE+I  R N++ +  T+++    ++ +   
Sbjct: 655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLELIGGRKNYDPS-ETSEKCHFPSFAFKKM 713

Query: 635 VAGEFNKLVEEEVDKIT-----LERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPIL 689
             G+   +V+ ++  +      ++R +KT L CIQ++   RPSM  V+ MLEG    P++
Sbjct: 714 EEGKLMDIVDGKMKNVDVTDERVQRAMKTALWCIQEDMQTRPSMSKVVQMLEGVF--PVV 771

Query: 690 AFPPLSHVNS 699
             P  S + S
Sbjct: 772 QPPSSSTMGS 781

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1

 Score =  177 bits (449), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 95/225 (42%), Positives = 139/225 (61%), Gaps = 10/225 (4%)

Query: 477 YKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPL--WRDRVRIALDVARGLLYLHDECEVQ 533
           Y    S +LLVYE+M  GSL   +F+ E T  L  WR R  IA+  A+G+ Y H++C  +
Sbjct: 592 YCSEDSHRLLVYEYMINGSLDKWIFSSEQTANLLDWRTRFEIAVATAQGIAYFHEQCRNR 651

Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
           IIHCDIK  NIL+DD++  K+SDFGLAK++    + +V  +RG+RGY+APEW ++  ITV
Sbjct: 652 IIHCDIKPENILLDDNFCPKVSDFGLAKMMGREHSHVVTMIRGTRGYLAPEWVSNRPITV 711

Query: 594 KSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLE 653
           K+DVYS+G++LLEI+  R N +++   A++     W Y     G   K V++ +  +  E
Sbjct: 712 KADVYSYGMLLLEIVGGRRNLDMSYD-AEDFFYPGWAYKELTNGTSLKAVDKRLQGVAEE 770

Query: 654 RMV----KTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPPL 694
             V    K    CIQDE ++RPSM  V+ +LEGT +   +  PP+
Sbjct: 771 EEVVKALKVAFWCIQDEVSMRPSMGEVVKLLEGTSD--EINLPPM 813

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGH3|Y5614_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2

 Score =  170 bits (431), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/274 (38%), Positives = 151/274 (55%), Gaps = 24/274 (8%)

Query: 439 PIGNDKVNDKR----KLLTVLAGCLGSITFLCFLIAISSLLVYKHRS-----------SK 483
           P+   K+ND R    KLL+V     G   F+  ++AIS++   +HR+             
Sbjct: 706 PVYKGKLNDGREVAVKLLSV-GSRQGKGQFVAEIVAISAV---QHRNLVKLYGCCYEGEH 761

Query: 484 KLLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR 542
           +LLVYE++  GSL   LF  +T  L W  R  I L VARGL+YLH+E  ++I+H D+K  
Sbjct: 762 RLLVYEYLPNGSLDQALFGEKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKAS 821

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           NIL+D     K+SDFGLAKL    +T I   V G+ GY+APE+   G +T K+DVY+FGV
Sbjct: 822 NILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGV 881

Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLE---RMVKTG 659
           V LE++  R N + N+      LL  W +N    G   +L++ ++ +  +E   RM+   
Sbjct: 882 VALELVSGRPNSDENLEDEKRYLLE-WAWNLHEKGREVELIDHQLTEFNMEEGKRMIGIA 940

Query: 660 LLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPP 693
           LLC Q    LRP M  V+ ML G +E+  +   P
Sbjct: 941 LLCTQTSHALRPPMSRVVAMLSGDVEVSDVTSKP 974

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1

 Score =  167 bits (424), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/222 (43%), Positives = 135/222 (60%), Gaps = 13/222 (5%)

Query: 482 SKKLLVYEFMSKGSLADLLF--NLETRPL--WRDRVRIALDVARGLLYLHDECEVQIIHC 537
           SKKLLVY++M  GSL   LF   +E + +  W+ R +IAL  ARGL YLHDEC   IIHC
Sbjct: 559 SKKLLVYDYMPNGSLDSHLFLNQVEEKIVLGWKLRFQIALGTARGLAYLHDECRDCIIHC 618

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
           DIK  NIL+D  +  K++DFGLAKL+  + + ++  +RG+RGY+APEW +   IT K+DV
Sbjct: 619 DIKPENILLDSQFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADV 678

Query: 598 YSFGVVLLEIICCRSNFEVNVSTADEV-LLSTWVYNCFVA-GEFNKLVEE--EVDKITLE 653
           YS+G++L E++  R N E   S  ++V    +W        G+   LV+   E D + +E
Sbjct: 679 YSYGMMLFELVSGRRNTE--QSENEKVRFFPSWAATILTKDGDIRSLVDPRLEGDAVDIE 736

Query: 654 ---RMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFP 692
              R  K    CIQDE + RP+M  V+ +LEG +E+    FP
Sbjct: 737 EVTRACKVACWCIQDEESHRPAMSQVVQILEGVLEVNPPPFP 778

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGH2|Y1561_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2

 Score =  167 bits (422), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/267 (39%), Positives = 148/267 (55%), Gaps = 24/267 (8%)

Query: 439 PIGNDKVNDKR----KLLTVLAGCLGSITFLCFLIAISSLLVYKHRS-----------SK 483
           P+    +ND R    KLL+V     G   F+  ++AISS+L   HR+             
Sbjct: 707 PVYKGNLNDGRVVAVKLLSV-GSRQGKGQFVAEIVAISSVL---HRNLVKLYGCCFEGEH 762

Query: 484 KLLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR 542
           ++LVYE++  GSL   LF  +T  L W  R  I L VARGL+YLH+E  V+I+H D+K  
Sbjct: 763 RMLVYEYLPNGSLDQALFGDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKAS 822

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           NIL+D     +ISDFGLAKL    +T I   V G+ GY+APE+   G +T K+DVY+FGV
Sbjct: 823 NILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGV 882

Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLE---RMVKTG 659
           V LE++  R N + N+    + LL  W +N        +L+++++    +E   RM+   
Sbjct: 883 VALELVSGRPNSDENLEEEKKYLLE-WAWNLHEKSRDIELIDDKLTDFNMEEAKRMIGIA 941

Query: 660 LLCIQDEPNLRPSMKNVILMLEGTMEI 686
           LLC Q    LRP M  V+ ML G +EI
Sbjct: 942 LLCTQTSHALRPPMSRVVAMLSGDVEI 968

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS=Arabidopsis thaliana GN=SD22 PE=1 SV=1

 Score =  165 bits (418), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/211 (42%), Positives = 123/211 (58%), Gaps = 12/211 (5%)

Query: 484 KLLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR 542
           +LLVY++M +GSL+  L     + L W  R RIAL  A+G+ YLH+ C   IIHCDIK  
Sbjct: 530 RLLVYDYMPQGSLSSYLSRTSPKLLSWETRFRIALGTAKGIAYLHEGCRDCIIHCDIKPE 589

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           NIL+D  + AK+SDFGLAKLL  + + ++A +RG+ GY+APEW +   IT K+DVYSFG+
Sbjct: 590 NILLDSDYNAKVSDFGLAKLLGRDFSRVLATMRGTWGYVAPEWISGLPITTKADVYSFGM 649

Query: 603 VLLEIICCRSNFEVNVSTADEV-------LLSTWVYNCFVAGEFNKLVEE----EVDKIT 651
            LLE+I  R N  VN  T  E            W     + G  + +V+     E +   
Sbjct: 650 TLLELIGGRRNVIVNSDTLGEKETEPEKWFFPPWAAREIIQGNVDSVVDSRLNGEYNTEE 709

Query: 652 LERMVKTGLLCIQDEPNLRPSMKNVILMLEG 682
           + RM    + CIQD   +RP+M  V+ MLEG
Sbjct: 710 VTRMATVAIWCIQDNEEIRPAMGTVVKMLEG 740

Serine/threonine-protein kinase.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2

 Score =  164 bits (414), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 138/244 (56%), Gaps = 26/244 (10%)

Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCD 538
           R  + LLVYE+M+ GSL   LF+     L W++R  IAL  ARGL YLH  C+ +IIHCD
Sbjct: 580 RGRQLLLVYEYMNHGSLEKTLFSGNGPVLEWQERFDIALGTARGLAYLHSGCDQKIIHCD 639

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           +K  NIL+ D ++ KISDFGL+KLL   ++ +   +RG+RGY+APEW  +  I+ K+DVY
Sbjct: 640 VKPENILLHDHFQPKISDFGLSKLLNQEESSLFTTMRGTRGYLAPEWITNAAISEKADVY 699

Query: 599 SFGVVLLEIICCRSN--FEVNVSTADE----------------VLLSTWVYNCFVAGEFN 640
           S+G+VLLE++  R N  F    ++  E                V    +  +    G + 
Sbjct: 700 SYGMVLLELVSGRKNCSFRSRSNSVTEDNNQNHSSTTTTSTGLVYFPLYALDMHEQGRYM 759

Query: 641 KL----VEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPPLSH 696
           +L    +E  V     E++V+  L C+ +EP LRP+M  V+ M EG+  IP L  P +  
Sbjct: 760 ELADPRLEGRVTSQEAEKLVRIALCCVHEEPALRPTMAAVVGMFEGS--IP-LGNPRMES 816

Query: 697 VNSL 700
           +N L
Sbjct: 817 LNFL 820

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LFS4|NIK1_ARATH Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana GN=NIK1 PE=1 SV=1

 Score =  162 bits (409), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/209 (40%), Positives = 129/209 (61%), Gaps = 11/209 (5%)

Query: 482 SKKLLVYEFMSKGSLADLLFNLETRPL--WRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           ++KLLVY +MS GS+A     ++ +P+  W  R RIA+  ARGL+YLH++C+ +IIH D+
Sbjct: 380 TEKLLVYPYMSNGSVAS---RMKAKPVLDWSIRKRIAIGAARGLVYLHEQCDPKIIHRDV 436

Query: 540 KLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
           K  NIL+DD   A + DFGLAKLL    + +   VRG+ G++APE+ ++G  + K+DV+ 
Sbjct: 437 KAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 496

Query: 600 FGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV------DKITLE 653
           FG++LLE++  +  FE   +   + ++  WV       +   LV++E+      D+I L+
Sbjct: 497 FGILLLELVTGQRAFEFGKAANQKGVMLDWVKKIHQEKKLELLVDKELLKKKSYDEIELD 556

Query: 654 RMVKTGLLCIQDEPNLRPSMKNVILMLEG 682
            MV+  LLC Q  P  RP M  V+ MLEG
Sbjct: 557 EMVRVALLCTQYLPGHRPKMSEVVRMLEG 585

Involved in defense response to geminivirus infection via regulation of the nuclear trafficking of RPL10A. Phosphorylates RPL10A in vitro.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	702
147811984	739	hypothetical protein VITISV_011721 [Viti	0.938	0.891	0.353	1e-103
359477048	792	PREDICTED: G-type lectin S-receptor-like	0.669	0.593	0.469	1e-103
125529231	723	hypothetical protein OsI_05328 [Oryza sa	0.924	0.897	0.336	1e-100
224116056	776	predicted protein [Populus trichocarpa]	0.649	0.587	0.435	8e-97
224116040	781	predicted protein [Populus trichocarpa]	0.618	0.555	0.455	7e-96
225431567	762	PREDICTED: G-type lectin S-receptor-like	0.611	0.562	0.45	7e-96
224073224	699	predicted protein [Populus trichocarpa]	0.903	0.907	0.335	3e-95
147782422	762	hypothetical protein VITISV_038481 [Viti	0.611	0.562	0.445	5e-95
225431571	762	PREDICTED: G-type lectin S-receptor-like	0.606	0.559	0.445	2e-93
224143661	691	predicted protein [Populus trichocarpa]	0.864	0.878	0.335	4e-91

>gi|147811984|emb|CAN59770.1| hypothetical protein VITISV_011721 [Vitis vinifera]

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 257/728 (35%), Positives = 374/728 (51%), Gaps = 69/728 (9%)

Query: 21  AQNHQLKSTISLGSSLSPSGQHSW-NSSSGLFQFGFYKQGSG-YSLGIWLVTSPNITVVW 78
           + + Q+    + GSSL     +S+  S +G F FGF + GSG + L IW    P  TVVW
Sbjct: 33  SSDAQISRNFTSGSSLIARDNNSFLASPNGDFAFGFQQVGSGGFLLAIWFNKVPERTVVW 92

Query: 79  TANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSN 138
           +AN D   + + + + LT DG+ +L   + K+   ADL      ++A+MLD+GNFVL  +
Sbjct: 93  SANXDSL-VQTGSRVQLTTDGEFMLNDPKGKQMWKADLN-STGVAYAAMLDTGNFVLAGH 150

Query: 139 RSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNM- 197
            S  +W+SF+ PTDTIL  Q L     L++  +E N S+GRF L +Q DGN+VLY  +  
Sbjct: 151 NSTYLWQSFNHPTDTILPTQILNQXSKLVARFSEVNYSSGRFMLILQTDGNLVLYTTDFP 210

Query: 198 LNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVI 257
           ++ A  AYWA  T          ++  + +G + L+  N+ +        S K       
Sbjct: 211 MDSANSAYWATAT-----VGIGFQVIYNESGDIYLIGNNRRK---LSDVLSNKEPTGEFY 262

Query: 258 YRTTLDSDGILRLYSHHFKNDGNSTVGIEWSAL-----EKQCV------VKGFCGLNSYC 306
            R  L+ DG+ R Y H       S   + WS L     E  C         G CG NSYC
Sbjct: 263 QRAILEYDGVFRQYVH--PKSAGSGPPMAWSPLSAFIPENICTNITASTGSGACGFNSYC 320

Query: 307 STSTNISTKGDCHCFRGFNFINPKMKFLGCYRNFSDE---EGCKRKMPAEFYNITSLKIT 363
           +   +   +  C C  G+ F++P  +  GC ++F  E   EG       +F  +T+  + 
Sbjct: 321 TLGDH--QRPICKCPPGYTFLDPHNEVKGCRQDFYPEICDEGSHETGRFDFERMTN--VD 376

Query: 364 WLGGLPYAKLSV-SKKDCSKSCLNDCYFGAAFYSDGACSKHKFPLMFATKDQYASAILFI 422
           W     Y +  + ++ DC K+CL DC+   A + DG C K K PL    K     +   +
Sbjct: 377 WPTS-DYDRFQLFTEDDCRKACLEDCFCAVAIFRDGDCWKKKIPLSNGRKPAIIESQQVM 435

Query: 423 KWSSGQANLSTHRIAPPIGNDKVN-DKRKLLTVLAG-CLGSITFLC------------FL 468
              + Q+  + H +       K    K    TV  G C G++  +             F 
Sbjct: 436 VGRNLQS-FTYHELEEATNGFKDELGKGAFGTVYKGSCNGNLVAVKKLERMVKEGEREFE 494

Query: 469 IAISSLLVYKHRSS-----------KKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL 517
             +S+++   H++             +LLVYEFMS GSLA  LF   +RP W  R++I L
Sbjct: 495 TEVSAIVRTNHKNLVQLLGFCNEGLHRLLVYEFMSNGSLATFLFG-SSRPKWHQRIQIIL 553

Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS 577
             A+GLLYLH+EC +Q IHCDIK +NIL+DDS  A+ISDFGLAK L  +QT  + G+RG+
Sbjct: 554 GTAKGLLYLHEECSIQTIHCDIKPQNILLDDSLTARISDFGLAKFLKTDQTRTMTGIRGT 613

Query: 578 RGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAG 637
           +GY+APEW  +  ITVK DVYSFG+VLLE+I CR NFE        V+L+   Y C+  G
Sbjct: 614 KGYVAPEWFKTVPITVKVDVYSFGIVLLELIFCRKNFEAEAEDKSPVVLAELAYYCYKEG 673

Query: 638 EFNKLVEEEVDKIT----LERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPP 693
           + + L++ + + +     LE+ V     CIQD+P+ RP MK V  MLEG +E+   + PP
Sbjct: 674 KLDMLLDNDEEALEDMERLEKFVMIAFWCIQDDPHQRPGMKKVTQMLEGAIEV---SSPP 730

Query: 694 LSHVNSLS 701
            S   +LS
Sbjct: 731 DSSSFTLS 738

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477048|ref|XP_002275811.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 228/486 (46%), Positives = 297/486 (61%), Gaps = 16/486 (3%)

Query: 1   MASVSVALILLFTVSEIIRAAQNHQLKSTISLGSSLSP--SGQHSWNSSSGLFQFGFYKQ 58
           MASV     L      +    +  +L   ISL SSLSP       W S SGLF FGFY Q
Sbjct: 1   MASVWFVFFLPLLCVGVRAQPEKAKL---ISLNSSLSPKYGSPMGWASPSGLFAFGFYPQ 57

Query: 59  GSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVF 118
           GSG+S+GIWLV +   TVVWTANRD+ P  +NA L  T DGKL+L+TEE  E  I D   
Sbjct: 58  GSGFSVGIWLVGTDENTVVWTANRDDPPASANAKLYFTEDGKLLLQTEEGSEISITD--G 115

Query: 119 DEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTG 178
             PA  ASMLDSG+FVLY     +IW SFS PTDT+LGGQ+L++ + ++SS + +N S+G
Sbjct: 116 SGPAVAASMLDSGSFVLYDQNLSVIWNSFSYPTDTLLGGQNLDSNKKMVSSESRSNHSSG 175

Query: 179 RFCLNMQEDGNIVLYPRNMLNKALEAYWANGTDIQSEYP-YSVKLNLSPNGVLQLLSGNK 237
            F L MQ DGN+V YP N   ++ ++YW++GT   S    YS +L+L+  G L L SG  
Sbjct: 176 WFFLAMQGDGNLVSYPVNSSGESDDSYWSSGTSSASRLNFYSTQLSLNTEGALYLSSGMS 235

Query: 238 TQKI-LFRSSYSLKSMNETVIYRTTLDSDGILRLYSHHFKNDGNSTVGIEWSALEKQCVV 296
           +  I  FR+S S  S N+T IYR T D DGI RLYSH F+N+G+S   I WS+L  QC V
Sbjct: 236 SLIIQTFRNS-SNPSKNKTTIYRATFDPDGIFRLYSHRFENNGSSNESIVWSSLSDQCDV 294

Query: 297 KGFCGLNSYCSTSTNISTKGDCHCFRGFNFINPKMKFLGCYRNFSDEEGCKRKMPAEFYN 356
           KGFCG NSYCS   N   K +CHC  GF F NP  K  GC R F+ ++  K       YN
Sbjct: 295 KGFCGFNSYCS---NPGAKAECHCLPGFAFNNPSEKIRGCSRIFNGDDCSKMNNQLISYN 351

Query: 357 ITSLKITWLGGLPYAKLSVSKKDCSKSCLNDCYFGAAFYSDGACSKHKFPLMFATKDQYA 416
           IT+L+ T  G  PY K S+  ++CSK CL+DC  GAA Y +G+C K+K P+ +   ++  
Sbjct: 352 ITTLENTGWGDYPYYKKSMKMEECSKFCLDDCNCGAALYRNGSCYKYKLPVRYGRINRNE 411

Query: 417 SAILFIKWSSGQANLSTHRIAP-PIGND-KVNDKRKLLTVLAGCLGSITFLCFLIAISSL 474
           +A   +K    Q   S +R  P P+  + K++ K+ L+ VL+  LGSI FLC +IAISS 
Sbjct: 412 TATALLK-GHLQRVKSAYRPPPAPMNTEVKIDGKKTLILVLSLSLGSIAFLCLVIAISSF 470

Query: 475 LVYKHR 480
            VY+H+
Sbjct: 471 WVYRHQ 476

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125529231|gb|EAY77345.1| hypothetical protein OsI_05328 [Oryza sativa Indica Group]

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 239/711 (33%), Positives = 359/711 (50%), Gaps = 62/711 (8%)

Query: 27  KSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQP 86
           ++ ++ G+S+       W+S SG F FGFY    G ++G+WL T+P+ITV WTA+R++ P
Sbjct: 26  QTNVTSGASVQAVAGAGWSSPSGHFVFGFYATDGGLAVGVWLATAPSITVTWTASRNDTP 85

Query: 87  MPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWES 146
               A L LT DG+L+      +++ +A          A+M D GNFVLY+  + + W +
Sbjct: 86  ATGGA-LRLTYDGRLLWTGANGQDRTVAAPPQPA--VAAAMRDDGNFVLYAANATVAWST 142

Query: 147 FSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQ-EDGNIVLYPRNMLNKALEAY 205
           F+ PTDT+L GQ L  G  L SSV+ T+ +TG++ L  Q  DGN+V+YP   +N A  AY
Sbjct: 143 FAAPTDTLLAGQDLAPGAQLFSSVSATSRATGKYRLTNQLNDGNLVMYPAGTMNVAAAAY 202

Query: 206 WANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSD 265
           W  GT  Q  +P +++L+ S  GVL L+  N +       + + +++ +   +R TLD D
Sbjct: 203 WDTGT-FQIGFPLTLRLDAS--GVLYLVGNNGSYTKNLTKASAAQAVEQAHYHRVTLDPD 259

Query: 266 GILRLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYCSTSTNISTKGDCHCFRGFN 325
           G+LR Y H   + G     +EW     +C VKG CG NSYC    +   +  C C  GF+
Sbjct: 260 GVLRSYRHGLLSSGGWKTDVEWIGPSDRCHVKGACGFNSYCVLDRD--AQPSCLCPPGFD 317

Query: 326 FINPKMKFLGCYRNFSDEE--GCKRKMPAEFYNITSLKITWLGGLPYAKLSV--SKKDCS 381
            I+      GC  +    E    +R  P      T   ++W    P   L+   S  DC 
Sbjct: 318 LIDAGDAAGGCTASSGAGECTAGQRADPGSSM-ATMQNVSW-ADTPCGVLAAGTSAADCQ 375

Query: 382 KSCLNDCYFGAAFY--SDGACSKHKFPLMFATKDQYASAILFIKWSSGQANLSTHRIAPP 439
            +C++DC+  AA    +DG C+K + PL +          +F+K     +          
Sbjct: 376 AACMSDCFCVAALLDTNDGTCTKQQLPLRYGRAG--GGYTMFVKTGGAASPALGGGGGGN 433

Query: 440 IGNDKVNDKRKLLTVLAGCLGSITF--LCFLIAISSLLVYKHRSSKKLLV---------- 487
             + ++   R+  TV   C+G +TF  LC L+A + LL    R  ++ +           
Sbjct: 434 HHHHRL---RRASTVALVCVGLLTFVALCALLASARLLWLNQRMVRRRVALADAEALDEE 490

Query: 488 ---------------YEF---MSKGSLADLLFNLETRPLWRDRV--RIALDVARGLLYLH 527
                          Y F   + +G+   +      R   R     R+   V  G     
Sbjct: 491 APLRSYSYEELEHATYSFRHHLGRGAFGTVFKGTLRRGGERTVAVKRLEKLVEDGEREFQ 550

Query: 528 DECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW-Q 586
            E + ++IHCD+K +NIL+D +  AKISDFGLAKLL P+ T     VRG+RGY+APEW +
Sbjct: 551 RELDSRVIHCDVKPQNILMDAAGTAKISDFGLAKLLQPDHTRTFTSVRGTRGYLAPEWYR 610

Query: 587 NSGLITVKSDVYSFGVVLLEIICC-RSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV-- 643
            +G +TVK+DVYS+GVVLLE + C RS      +  +E  L+ W Y   +     K    
Sbjct: 611 GAGPVTVKADVYSYGVVLLETVACRRSMEMEEAAGEEERTLAEWAYELLLVKSEAKSAMS 670

Query: 644 -EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPP 693
            +E V+   +ER+V+  + C+Q EP  RPSM  VILML+G +E+P   FPP
Sbjct: 671 SDETVEAAEVERVVRVAMWCVQVEPQSRPSMDGVILMLQGRLEVP---FPP 718

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116056|ref|XP_002332037.1| predicted protein [Populus trichocarpa] gi|222875262|gb|EEF12393.1| predicted protein [Populus trichocarpa]

 Score =  361 bits (926), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 212/487 (43%), Positives = 292/487 (59%), Gaps = 31/487 (6%)

Query: 8   LILLFTVSEIIRAAQNHQLKSTISLGSSLSPSGQ-HSWNSSSGLFQFGFYKQGSGYSLGI 66
            +L+  + + + + QNH   + ISLGSS+S + Q  SW S SG F FGFY QGSG+ +GI
Sbjct: 9   FLLVICIYKPVSSQQNHS--NLISLGSSISTNVQPTSWRSPSGTFAFGFYPQGSGFIVGI 66

Query: 67  WLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFAS 126
           WLV  P   + WTA RD+ P+PSNATL LT++GKL+L+T  +  +        E A+ AS
Sbjct: 67  WLVCKPADIITWTAYRDDPPVPSNATLELTINGKLLLRTYSANNEA-------EIAASAS 119

Query: 127 MLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQE 186
           MLDSGNFVLYS  S +IW+SF  PTDTIL GQ+L + + L+SSV+ +N S+GRF L MQE
Sbjct: 120 MLDSGNFVLYSG-SSVIWQSFDYPTDTILVGQNLTDFDKLVSSVSSSNHSSGRFFLAMQE 178

Query: 187 DGNIVLYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSS 246
           DGN+V YP N   ++++AYWA+ T   ++    + L L+  G L + + +K   +L  SS
Sbjct: 179 DGNLVAYPTNSAGESVDAYWASSTTGDNK---GLSLYLNQQGFLSMDTVSKKPVLLASSS 235

Query: 247 YSLKSMNETVIYRTTLDSDGILRLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYC 306
           Y     N+T I+R TLD+DGI RLYSH  +N  + +V IEWSAL  QC V GFC  NSYC
Sbjct: 236 YPCN--NKTTIFRATLDADGIFRLYSHCLENKTSRSVHIEWSALNNQCNVHGFCDFNSYC 293

Query: 307 STSTNISTKGDCHCFRGFNFINPKMKFLGCYRNFSDEEGCKRKMPAEFYNITSLKITWLG 366
           S    + T  DC C+ GF F +P  KF GCY+N + E  C+     E Y++ +++     
Sbjct: 294 S---GMGTNFDCSCYPGFAFNDPSEKFSGCYKNVT-ESFCRGTKEGEMYDVKAVENILFE 349

Query: 367 GLPYAKLSVSKKDCSKSCLNDCYFGAAFYSDGACSKHKFPLMFATKDQYASAILFIKWSS 426
             PY+ L V K++C  SCL DC    A Y +  C K+  P+ +  KD   S+I F K  +
Sbjct: 350 RFPYSVLHVKKENCGLSCLEDCLCDVALYMNEKCEKYAAPIRYGLKDINISSIAFFKVKA 409

Query: 427 GQANLSTHRIAPPIGND-KVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL 485
                     APP+     +  K+ LL  LA   GS+T LCF+IAIS+  VY+ R+    
Sbjct: 410 ASP------AAPPMSPTIIIESKKSLLVFLAIAFGSVTLLCFVIAISTFCVYRDRA---- 459

Query: 486 LVYEFMS 492
            +YE +S
Sbjct: 460 FLYEKLS 466

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116040|ref|XP_002332033.1| predicted protein [Populus trichocarpa] gi|222875258|gb|EEF12389.1| predicted protein [Populus trichocarpa]

 Score =  358 bits (918), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 207/454 (45%), Positives = 278/454 (61%), Gaps = 20/454 (4%)

Query: 30  ISLGSSLSP-SGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMP 88
           I LGS LSP S  +SW S SG F FGFY QG+G+++GIW++  PN TVVWTANRD++P+ 
Sbjct: 29  IHLGSQLSPISNLNSWQSPSGNFAFGFYSQGNGFAVGIWMMGQPNNTVVWTANRDDEPVS 88

Query: 89  SNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFS 148
            NAT+ L+ +GKL+L+TE+  E  IA++   E A+ ASMLDSGNFVLY N S +IW+SF 
Sbjct: 89  FNATIHLSEEGKLLLRTEQGNENLIANV--SEIAASASMLDSGNFVLY-NGSSVIWQSFD 145

Query: 149 TPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWAN 208
            PTDTIL GQ+L   + L+SSV+ +N S+GRF L MQ DGN+V YP N    +++AYWA+
Sbjct: 146 YPTDTILVGQNLTYSDKLVSSVSSSNHSSGRFFLAMQADGNLVAYPTNSAGLSVDAYWAS 205

Query: 209 GTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGIL 268
            T   S+   S+  N    G L + + +K   +L RSSY     N+T I+R TLD+DGI 
Sbjct: 206 NTYKDSKKGLSLYFN--HQGFLFMDTVSKKPVLLARSSYPCN--NKTTIFRATLDADGIF 261

Query: 269 RLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYCSTSTNISTKGDCHCFRGFNFIN 328
           RLYSH  +N  + +V IEWSAL   C V+GFC  NSYCS    + T  DC C+ GF F +
Sbjct: 262 RLYSHCLENKTSRSVHIEWSALNNTCNVRGFCDFNSYCS---GMGTNADCSCYPGFAFND 318

Query: 329 PKMKFLGCYRNFSDEEGCKRKMPAEFYNITSLKITWLGGLPYAKLSVSKKDCSKSCLNDC 388
           P  KF GCY+N   E  C      +  ++ +++       PY+ L   K++C  SCL DC
Sbjct: 319 PSEKFSGCYKNVP-ESFCTDTKDGQMNDVITVENILFERYPYSVLDEKKENCGLSCLEDC 377

Query: 389 YFGAAFYSDGACSKHKFPLMFATKDQYASAILFIKWSSGQANLSTHRIAPPIG-NDKVND 447
               A Y +  C K+  P+ +  KD  AS+I F K     A       APP+     +  
Sbjct: 378 LCDVALYMNERCEKYTAPIRYGIKDINASSIAFFKVKPTPA-------APPMSLTIIIES 430

Query: 448 KRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRS 481
           K+ LL  LA   GS+TFLCF+IAIS+  VY+ R+
Sbjct: 431 KKSLLVFLAIAFGSVTFLCFVIAISTFCVYRDRA 464

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431567|ref|XP_002276274.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  358 bits (918), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 207/460 (45%), Positives = 282/460 (61%), Gaps = 31/460 (6%)

Query: 30  ISLGSSLSPS-GQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMP 88
           I LGSSLSP+ G  SW S SG F FGFY Q +G+++G+WLV     TVVWTANRD+ P+ 
Sbjct: 13  IELGSSLSPTNGSSSWVSPSGHFAFGFYPQDTGFAVGVWLVGQSGKTVVWTANRDDPPVS 72

Query: 89  SNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYS-NRSGIIWESF 147
           SN  L  T +GKL+L+T   +E  IAD+   E ++ ASMLDSGNFVL+  N S IIW+SF
Sbjct: 73  SNTALEFTRNGKLLLRTGPGEEVSIADVA--ESSASASMLDSGNFVLFGDNSSFIIWQSF 130

Query: 148 STPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWA 207
             PTDT+LGGQ+L N   +LSS    +S+ G F L++Q  G IV YP NM   + + YW 
Sbjct: 131 QHPTDTLLGGQNLSN---ILSSSKTESSAIGGFFLSLQSGGRIVSYPYNM-GVSEDPYWT 186

Query: 208 NGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGI 267
              D +         +L+  G+L           L  +  S  + NET+IYR TLD DG+
Sbjct: 187 --VDAR---------DLNDKGLLSSYDATSNVLTLASNISSDDAKNETIIYRATLDVDGV 235

Query: 268 LRLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYCSTSTNISTKGDCHCFRGFNFI 327
            RLYSH F N   S+V I WSA +  C VKG CG+N  CS++    T  +C C  GF  I
Sbjct: 236 FRLYSHSFGNSNISSVSIMWSAFKNPCDVKGLCGVNGLCSSN---GTNANCSCVPGFVSI 292

Query: 328 NPKMKFLGCYRNFSDEEGCKRKMPAEFYNITSLK-ITWLGGLPYAKL-SVSKKDCSKSCL 385
           N + K+ GCYR+F++EEGC+ + P   YNIT+L+ ++W G  PY+ L S++++ CS+SCL
Sbjct: 293 N-REKYSGCYRSFNNEEGCRGQEPESLYNITTLRNVSWEGANPYSALTSLNEQGCSRSCL 351

Query: 386 NDCYFGAAFYSDGACSKHKFPLMFATKDQYASAILFIKWSSGQANLSTHRIAPPIGNDKV 445
            DC   AA+Y +G C ++K PL+    +Q  S I F+K S G A +    I  P    KV
Sbjct: 352 QDCNCWAAYYFNGTCRRYKLPLVHGIANQNESGITFLKMSLGTAYVGDD-IPAPRNQTKV 410

Query: 446 --NDKRKLLTVLAGCLGSITFLCFLIAISSLLVYK---HR 480
             ++K++L+ +LA  LGSI FLC L+A+SS  +Y+   HR
Sbjct: 411 IESNKKELILILASSLGSIAFLCALVAVSSFFIYRSQVHR 450

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224073224|ref|XP_002304031.1| predicted protein [Populus trichocarpa] gi|222841463|gb|EEE79010.1| predicted protein [Populus trichocarpa]

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 248/739 (33%), Positives = 371/739 (50%), Gaps = 105/739 (14%)

Query: 25  QLKSTISLGSSLSPSGQH-SWNSSSGLFQFGFYK--QGSGYSLGIWLVTSPNITVVWTA- 80
           Q    + +G+S++ +    SW S+SG F FGF +      + L IW    P  TVVW A 
Sbjct: 5   QTNGRVPVGASITATDDSPSWLSASGEFAFGFRQLENKDYFLLSIWYEKIPEKTVVWYAI 64

Query: 81  ---NRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDE-----PASFASMLDSGN 132
                D+  +P  + + LT D  L+L        P  +L++         S   M D+GN
Sbjct: 65  GEDPTDDPAVPRGSKVELTDDRGLLLA------DPQGNLIWTSRILLGAVSSGVMNDTGN 118

Query: 133 FVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVL 192
           FVL +  S  +WESF+ PTDT+L  Q +E G  + S  TETN S GRF L + ++GN+VL
Sbjct: 119 FVLQNRNSERLWESFNNPTDTLLPTQIMEAGGVVSSRRTETNFSLGRFQLRLLDNGNLVL 178

Query: 193 YPRNMLNK-ALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKS 251
              N+  K A + Y+ +GT   S                   S N   ++LF  S     
Sbjct: 179 NSMNLSTKFAYDDYYRSGTSDASN------------------SSNTGYRLLFNES----- 215

Query: 252 MNETVIYRTTLDSDGILRLYSHHFKNDGNSTVGIEWSALEKQCV------VKGFCGLNSY 305
               +++R       ++    H+ ++   S+V   WS  +  CV        G CG NS 
Sbjct: 216 --GYILWRPPPSPSSLISADIHYIQS--WSSV---WSKPDDICVNMGADLGSGACGYNSI 268

Query: 306 CSTSTNISTKGDCHCFRGFNFINPKMKFLGCYRNFSDEEGCK----RKMPAEFYNITSLK 361
           C+   +   + +C C +GF+ ++   K+  C  +F  E  C+         ++  +  + 
Sbjct: 269 CNLKAD--KRPECKCPQGFSLLDQNDKYGSCIPDF--ELSCRDDGLNSTEDQYDFVELIN 324

Query: 362 ITWLGGLPYAKLSVSKKDCSKSCLNDCYFGAAFYSDGACSKHKFPLMFATKDQYASAILF 421
           + W          +++ +C KSCLNDC    A + DG C K K PL     D   +   F
Sbjct: 325 VDWPTSDYERYKPINEDECRKSCLNDCLCSVAIFRDG-CWKKKLPLSNGRFDIGMNGKAF 383

Query: 422 IKWSSGQANLS--THRIAPPIGND-----------------------KVNDKRKLLTVLA 456
           +K+  G  NL   T++      ND                       +V   +KL  V+ 
Sbjct: 384 LKFPKGYTNLRYFTYKELAEATNDFKDEVGRGGFGVVYKGTIQAGSTRVVAVKKLDKVVQ 443

Query: 457 GCLGSITFLCFLIAISS--------LLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPL 508
              G   F   +  I          LL +      +LLVYEF+S G+LA+ LF   ++P 
Sbjct: 444 D--GEKEFKTEVQVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLSNGTLANFLFGC-SKPN 500

Query: 509 WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT 568
           W+ R +IA  +ARGLLYLH+EC  QIIHCDIK +NIL+D+ + A+ISDFGLAKLL+ +Q+
Sbjct: 501 WKQRTQIAFGIARGLLYLHEECGTQIIHCDIKPQNILLDNYYNARISDFGLAKLLVMDQS 560

Query: 569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST 628
                +RG++GY+APEW  +  ITVK DVYSFGV+LLEIICCR N ++ +   +  +L+ 
Sbjct: 561 KTQTAIRGTKGYVAPEWFRNRPITVKVDVYSFGVMLLEIICCRRNVDLEIGEVENPVLTD 620

Query: 629 WVYNCFVAGEFNKLV----EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM 684
           W Y+C++ G  + L+    E + D  TLER++K G+ CIQ++P+LRP+M+ V  MLEG +
Sbjct: 621 WAYDCYMDGSLDVLIGDDTEAKNDISTLERLLKVGIWCIQEDPSLRPTMRKVTQMLEGVV 680

Query: 685 EIPILAFP-PLSHVNSLSH 702
           E+P    P P S ++  SH
Sbjct: 681 EVPAAPNPFPYSSISKYSH 699

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147782422|emb|CAN72833.1| hypothetical protein VITISV_038481 [Vitis vinifera]

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 205/460 (44%), Positives = 280/460 (60%), Gaps = 31/460 (6%)

Query: 30  ISLGSSLSPS-GQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMP 88
           I LGSSLSP+ G  SW S SG F FGFY Q +G+++G+WLV     TVVWTANRD+ P+ 
Sbjct: 13  IELGSSLSPTNGSSSWVSPSGHFAFGFYPQDTGFAVGVWLVGQSGKTVVWTANRDDPPVS 72

Query: 89  SNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYS-NRSGIIWESF 147
           SN  L  T +GKL+L+T   +E  IAD+   E  + ASMLDSGNFVL+  N S IIW+SF
Sbjct: 73  SNTALEFTRNGKLLLRTGPGEEVSIADVA--ESXASASMLDSGNFVLFGDNSSFIIWQSF 130

Query: 148 STPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWA 207
             PTBT+LGGQ+L N   +LSS    + + G F L++Q  G IV YP NM   + + YW 
Sbjct: 131 QHPTBTLLGGQNLSN---ILSSSKTESXAIGGFFLSLQSGGRIVSYPYNM-GVSEDPYWT 186

Query: 208 NGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGI 267
              D +         +L+  G+L           L  +  S  + NET+IYR TLD DG+
Sbjct: 187 --VDAR---------DLNDKGLLSSYDATSNVLTLASNISSDDAKNETIIYRATLDVDGV 235

Query: 268 LRLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYCSTSTNISTKGDCHCFRGFNFI 327
            RLYSH F N   S+V I WSA +  C VKG CG+N  CS++    T  +C C  GF  I
Sbjct: 236 FRLYSHSFGNSNISSVSIMWSAFKNPCDVKGLCGVNGLCSSN---GTNANCSCVPGFVSI 292

Query: 328 NPKMKFLGCYRNFSDEEGCKRKMPAEFYNITSLK-ITWLGGLPYAKL-SVSKKDCSKSCL 385
           N + K+ GCYR+F++EEGC+ + P   YNIT+L+ ++W G  PY+ L S++++ CS+SCL
Sbjct: 293 N-REKYSGCYRSFNNEEGCRGQEPESLYNITTLRNVSWEGANPYSALTSLNEQGCSRSCL 351

Query: 386 NDCYFGAAFYSDGACSKHKFPLMFATKDQYASAILFIKWSSGQANLSTHRIAPPIGNDKV 445
            DC   AA+Y +G C ++K PL+    +Q  S I F+K S G A +    I  P    KV
Sbjct: 352 QDCNCWAAYYFNGTCRRYKLPLVHGIANQNESGITFLKMSLGTAYVGDD-IPAPRNQTKV 410

Query: 446 --NDKRKLLTVLAGCLGSITFLCFLIAISSLLVYK---HR 480
             ++K++L+ +LA  LGSI FLC L+A+SS  +Y+   HR
Sbjct: 411 IESNKKELILILASSLGSIAFLCALVAVSSFFIYRSQVHR 450

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431571|ref|XP_002276322.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 209/469 (44%), Positives = 285/469 (60%), Gaps = 43/469 (9%)

Query: 30  ISLGSSLSP-SGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMP 88
           I LGSSL P +G  SW S SG F FGFY QG+G+++G+WLV+    TVVWTANRD+  + 
Sbjct: 13  IKLGSSLFPHNGSSSWVSPSGHFAFGFYPQGTGFAVGVWLVSQSGNTVVWTANRDKPLVS 72

Query: 89  SNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYS-NRSGIIWESF 147
            N TL  T +GKL+L+T   ++  IAD+   E A+ ASMLDSGNFVL+  N S IIW+SF
Sbjct: 73  FNTTLEFTTNGKLLLRTGPGEQITIADVA--ESAASASMLDSGNFVLFGDNSSSIIWQSF 130

Query: 148 STPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWA 207
             PTDT+LGGQ+   G+ L S  TE+  + G F L+   DG IV YP N L  + + YW 
Sbjct: 131 QYPTDTLLGGQNFSTGDILSSRKTES-PAIGDFYLSTS-DGQIVSYPYN-LAVSEDPYWT 187

Query: 208 ------NGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTT 261
                 N   + S Y  +  L L+ N +                  S  + NET+IYR T
Sbjct: 188 VDARDLNDMGLLSSYD-AFTLTLASNNI-----------------SSDDAKNETIIYRAT 229

Query: 262 LDSDGILRLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYCSTSTNISTKGDCHCF 321
           LD DGI RLYSH F N   STV I WSA++  C VKG CG+N+ CS++    T  +C C 
Sbjct: 230 LDVDGIFRLYSHSFGNSNISTVSIMWSAIKNPCDVKGLCGVNALCSSN---GTNANCSCV 286

Query: 322 RGFNFINPKMKFLGCYRNFSDEEGCKRKMPAEFYNITSLK-ITWLGGLPYAKL-SVSKKD 379
            GF  IN + K+ GCYR+F++EEGC+ + P   YNIT+L+ ++W    PY+ + S+++KD
Sbjct: 287 PGFVSIN-REKYSGCYRSFNNEEGCRGQEPESIYNITTLRNVSWKDANPYSGIKSLNEKD 345

Query: 380 CSKSCLNDCYFGAAFYSDGACSKHKFPLMFATKDQYASAILFIKWSSGQANLSTHRIAPP 439
           CS+SCL DC   AA+Y +G C ++K PL++   +Q  S I F+K S G A +  + I  P
Sbjct: 346 CSRSCLQDCNCWAAYYFNGTCRRYKLPLVYGIANQNESGITFLKMSLGTAYVGDN-IPAP 404

Query: 440 IGNDKV--NDKRKLLTVLAGCLGSITFLCFLIAISSLLVYK---HRSSK 483
               KV  ++K++L+ +LA  LGSI FLC L+A+SS  +Y+   HR  K
Sbjct: 405 RNQTKVIESNKKELILILASSLGSIAFLCALVAMSSFFIYRSQVHRYRK 453

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143661|ref|XP_002336066.1| predicted protein [Populus trichocarpa] gi|222869874|gb|EEF07005.1| predicted protein [Populus trichocarpa]

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 242/721 (33%), Positives = 361/721 (50%), Gaps = 114/721 (15%)

Query: 43  SWNSSSGLFQFGF----YKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMD 98
           SW SSSG F FGF    YK    + L IW    P  T+VW AN D  P P  + + L  D
Sbjct: 18  SWLSSSGEFAFGFQPLEYKDH--FLLSIWYAKIPEKTIVWYANGD-NPAPRESKVELRGD 74

Query: 99  GKLILKTEESKEKPIADLVFDEPA-----SFASMLDSGNFVLYSNRSGIIWESFSTPTDT 153
             L+L        P  +L++   +     S   M D+GNFVL ++ S  +WESFS PTDT
Sbjct: 75  SGLVLT------DPQGNLIWSSGSLLGTVSSGVMNDTGNFVLQNSNSFRLWESFSNPTDT 128

Query: 154 ILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKAL--EAYWANGTD 211
           +L  Q +E G  + S  TETN S GRF L + ++GN+VL   N+  K +  + Y +  +D
Sbjct: 129 LLPTQIMEVGGVVSSRRTETNFSLGRFQLRLLDNGNLVLNYMNLPTKFVYDDYYSSETSD 188

Query: 212 IQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLY 271
             +      +L  + +G + +L  N   + L +++  L +++    +R TL+ D  L   
Sbjct: 189 ASNSSNSGYRLIFNESGYMYILRRNGLIEDLTKTA--LPTID--FYHRATLNFDADLG-- 242

Query: 272 SHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYCSTSTNISTKGDCHCFRGFNFINPKM 331
                                     G CG NS C+   +   + +C C +GF+ ++   
Sbjct: 243 -------------------------SGACGYNSICNLKAD--KRPECKCPQGFSLLDQND 275

Query: 332 KFLGCYRNFSDEEGCK----RKMPAEFYNITSLKITWLGGLPYAKLSVSKKDCSKSCLND 387
           K+  C  +F  E  C+         ++  +  + + W          +++ +C KSCLND
Sbjct: 276 KYGSCIPDF--ELSCRDDGLNSTEDQYDFVELINVDWPTSDYERYKPINEDECRKSCLND 333

Query: 388 CYFGAAFYSDGACSKHKFPLMFATKDQYASAILFIKWSSG-------------QANLS-- 432
           C    A + DG C K K PL     D   +   F+K+  G             + NL   
Sbjct: 334 CLCSVAIFRDG-CWKKKLPLSNGRFDIGMNGKAFLKFPKGYKTEKVKEGGSGLETNLRYF 392

Query: 433 THRIAPPIGND-----------------------KVNDKRKLLTVLAGCLGSITFLCFLI 469
           T++      ND                       +V   +KL  V+    G   F   + 
Sbjct: 393 TYKELAEATNDFKDEVGRGGFGVVYKGTIQAGSTRVVAVKKLDKVVQD--GEKEFKTEVQ 450

Query: 470 AISS--------LLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR 521
            I          LL +      +LLVYEF+S G+LA+ LF   ++P W+ R +IA  +AR
Sbjct: 451 VIGQTHHKNLVRLLGFCDEGQNRLLVYEFLSNGTLANFLFGC-SKPNWKQRTQIAFGIAR 509

Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYM 581
           GLLYLH+EC  QIIHCDIK +NIL+D+ + A+ISDFGLAKLL+ +Q+     +RG++GY+
Sbjct: 510 GLLYLHEECGTQIIHCDIKPQNILLDNYYNARISDFGLAKLLVMDQSKTQTAIRGTKGYV 569

Query: 582 APEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNK 641
           APEW  +  ITVK DVYSFGV+LLEIICCR N ++ +   +  +L+ W Y+C++ G  + 
Sbjct: 570 APEWFRNRPITVKVDVYSFGVMLLEIICCRRNVDLEIGEVENPVLTDWAYDCYMDGSLDV 629

Query: 642 LV----EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFP-PLSH 696
           L+    E + D  TLER++K G+ CIQ++P+LRP+M+ V  MLEG +E+P    P P S 
Sbjct: 630 LIGDDTEAKNDISTLERLLKVGIWCIQEDPSLRPTMRKVTQMLEGVVEVPAAPNPFPYSS 689

Query: 697 V 697
           +
Sbjct: 690 I 690

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	702
TAIR|locus:2059103	828	AT2G19130 [Arabidopsis thalian	0.297	0.252	0.432	2.2e-59
TAIR|locus:2026155	829	AT1G34300 [Arabidopsis thalian	0.301	0.255	0.463	1.9e-55
TAIR|locus:2116525	821	SD2-5 "S-domain-2 5" [Arabidop	0.400	0.342	0.359	1.7e-50
TAIR|locus:2182603	872	AT5G35370 [Arabidopsis thalian	0.190	0.153	0.503	2.9e-48
TAIR|locus:2197709	809	AT1G61480 [Arabidopsis thalian	0.289	0.250	0.388	6.2e-46
TAIR|locus:2197744	807	AT1G61420 [Arabidopsis thalian	0.292	0.254	0.374	8.3e-46
TAIR|locus:2200151	830	SD1-13 "S-domain-1 13" [Arabid	0.293	0.248	0.406	1.4e-45
TAIR|locus:2131684	783	AT4G27290 [Arabidopsis thalian	0.296	0.265	0.384	2.9e-45
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.292	0.241	0.394	4.3e-45
TAIR|locus:2197729	805	SD1-29 "S-domain-1 29" [Arabid	0.320	0.279	0.385	8.8e-45

TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)]

 Score = 416 (151.5 bits), Expect = 2.2e-59, Sum P(2) = 2.2e-59
 Identities = 96/222 (43%), Positives = 135/222 (60%)

Query:   482 SKKLLVYEFMSKGSLADLLF--NLETRPL--WRDRVRIALDVARGLLYLHDECEVQIIHC 537
             SKKLLVY++M  GSL   LF   +E + +  W+ R +IAL  ARGL YLHDEC   IIHC
Sbjct:   559 SKKLLVYDYMPNGSLDSHLFLNQVEEKIVLGWKLRFQIALGTARGLAYLHDECRDCIIHC 618

Query:   538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             DIK  NIL+D  +  K++DFGLAKL+  + + ++  +RG+RGY+APEW +   IT K+DV
Sbjct:   619 DIKPENILLDSQFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADV 678

Query:   598 YSFGVVLLEIICCRSNFEVNVSTADEV-LLSTWVYNCFVA-GEFNKLVEE--EVDKITLE 653
             YS+G++L E++  R N E   S  ++V    +W        G+   LV+   E D + +E
Sbjct:   679 YSYGMMLFELVSGRRNTEQ--SENEKVRFFPSWAATILTKDGDIRSLVDPRLEGDAVDIE 736

Query:   654 ---RMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFP 692
                R  K    CIQDE + RP+M  V+ +LEG +E+    FP
Sbjct:   737 EVTRACKVACWCIQDEESHRPAMSQVVQILEGVLEVNPPPFP 778

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2026155 AT1G34300 [Arabidopsis thaliana (taxid:3702)]

 Score = 468 (169.8 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
 Identities = 103/222 (46%), Positives = 139/222 (62%)

Query:   474 LLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPL--WRDRVRIALDVARGLLYLHDECE 531
             L+ +  +   +LLVYEFM  GSL + LF  ++     W  R  IAL  A+G+ YLH+EC 
Sbjct:   542 LIGFCSQGRHRLLVYEFMRNGSLDNFLFTTDSAKFLTWEYRFNIALGTAKGITYLHEECR 601

Query:   532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGL 590
               I+HCDIK  NIL+DD++ AK+SDFGLAKLL P      ++ VRG+RGY+APEW  +  
Sbjct:   602 DCIVHCDIKPENILVDDNFAAKVSDFGLAKLLNPKDNRYNMSSVRGTRGYLAPEWLANLP 661

Query:   591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFN-----KLVEE 645
             IT KSDVYS+G+VLLE++  + NF+V+  T +    S W Y  F  G        +L E+
Sbjct:   662 ITSKSDVYSYGMVLLELVSGKRNFDVSEKT-NHKKFSIWAYEEFEKGNTKAILDTRLSED 720

Query:   646 E-VDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEI 686
             + VD   + RMVKT   CIQ++P  RP+M  V+ MLEG  EI
Sbjct:   721 QTVDMEQVMRMVKTSFWCIQEQPLQRPTMGKVVQMLEGITEI 762

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2116525 SD2-5 "S-domain-2 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 449 (163.1 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
 Identities = 110/306 (35%), Positives = 171/306 (55%)

Query:   406 PLMFATKD-QYASAILFIKWSSGQANLSTHRIAPPIGN-------DKVNDKRKLLTVLAG 457
             P+ FA KD Q A+    +K   G    S +    P G+       + +   +K       
Sbjct:   480 PIRFAYKDLQSATNNFSVKLGQGGFG-SVYEGTLPDGSRLAVKKLEGIGQGKKEFRAEVS 538

Query:   458 CLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPL---WRDRVR 514
              +GSI  L  L+ +          + +LL YEF+SKGSL   +F  +   +   W  R  
Sbjct:   539 IIGSIHHL-HLVRLRGFCA---EGAHRLLAYEFLSKGSLERWIFRKKDGDVLLDWDTRFN 594

Query:   515 IALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGV 574
             IAL  A+GL YLH++C+ +I+HCDIK  NIL+DD++ AK+SDFGLAKL+   Q+ +   +
Sbjct:   595 IALGTAKGLAYLHEDCDARIVHCDIKPENILLDDNFNAKVSDFGLAKLMTREQSHVFTTM 654

Query:   575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
             RG+RGY+APEW  +  I+ KSDVYS+G+VLLE+I  R N++ +  T+++    ++ +   
Sbjct:   655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLELIGGRKNYDPS-ETSEKCHFPSFAFKKM 713

Query:   635 VAGEFNKLVEEEVDKITL-----ERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPIL 689
               G+   +V+ ++  + +     +R +KT L CIQ++   RPSM  V+ MLEG    P++
Sbjct:   714 EEGKLMDIVDGKMKNVDVTDERVQRAMKTALWCIQEDMQTRPSMSKVVQMLEGVF--PVV 771

Query:   690 AFPPLS 695
               PP S
Sbjct:   772 Q-PPSS 776

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

TAIR|locus:2182603 AT5G35370 [Arabidopsis thaliana (taxid:3702)]

 Score = 345 (126.5 bits), Expect = 2.9e-48, Sum P(3) = 2.9e-48
 Identities = 68/135 (50%), Positives = 94/135 (69%)

Query:   480 RSSKKLLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCD 538
             R  + LLVYE+M+ GSL   LF+     L W++R  IAL  ARGL YLH  C+ +IIHCD
Sbjct:   580 RGRQLLLVYEYMNHGSLEKTLFSGNGPVLEWQERFDIALGTARGLAYLHSGCDQKIIHCD 639

Query:   539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
             +K  NIL+ D ++ KISDFGL+KLL   ++ +   +RG+RGY+APEW  +  I+ K+DVY
Sbjct:   640 VKPENILLHDHFQPKISDFGLSKLLNQEESSLFTTMRGTRGYLAPEWITNAAISEKADVY 699

Query:   599 SFGVVLLEIICCRSN 613
             S+G+VLLE++  R N
Sbjct:   700 SYGMVLLELVSGRKN 714

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

TAIR|locus:2197709 AT1G61480 [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 6.2e-46, Sum P(2) = 6.2e-46
 Identities = 82/211 (38%), Positives = 119/211 (56%)

Query:   483 KKLLVYEFMSKGSLADLLFNLETRPL--WRDRVRIALDVARGLLYLH-DECEVQIIHCDI 539
             ++LLVYEF+   SL   LF+   R    W  R  I   +ARGL YLH D C +++IH D+
Sbjct:   564 ERLLVYEFLLNKSLDTFLFDSRKRLEIDWPKRFNIIEGIARGLHYLHRDSC-LRVIHRDL 622

Query:   540 KLRNILIDDSWRAKISDFGLAKLLMPNQ-TGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
             K+ NIL+D+    KISDFGLA++    +       V G+ GYMAPE+  +G+ + KSD+Y
Sbjct:   623 KVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVAGTLGYMAPEYAWTGMFSEKSDIY 682

Query:   599 SFGVVLLEIICCRSNFEVNVSTADEVLLS-TWVYNCFVAGE--FNKLVEEEVDKITLERM 655
             SFGV+LLEII        +     + LL+  W   C   G    +K V +    + +ER 
Sbjct:   683 SFGVILLEIITGEKISRFSYGRQGKTLLAYAWESWCESGGIDLLDKDVADSCHPLEVERC 742

Query:   656 VKTGLLCIQDEPNLRPSMKNVILMLEGTMEI 686
             V+ GLLC+Q +P  RP+   ++ ML  T ++
Sbjct:   743 VQIGLLCVQHQPADRPNTMELLSMLTTTSDL 773

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2197744 AT1G61420 [Arabidopsis thaliana (taxid:3702)]

 Score = 343 (125.8 bits), Expect = 8.3e-46, Sum P(2) = 8.3e-46
 Identities = 79/211 (37%), Positives = 121/211 (57%)

Query:   483 KKLLVYEFMSKGSLADLLFNLETRPL--WRDRVRIALDVARGLLYLHDECEVQIIHCDIK 540
             +KLL+YEFM   SL   LF+   R    W  R+ I   +ARG+ YLH +  +++IH D+K
Sbjct:   562 EKLLIYEFMLNNSLDTFLFDSRKRLEIDWPKRLDIIQGIARGIHYLHRDSHLKVIHRDLK 621

Query:   541 LRNILIDDSWRAKISDFGLAKLLMPNQ-TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
             + NIL+D+    KISDFGLA++    +       V G+ GYMAPE+  +G+ + KSD+YS
Sbjct:   622 VSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVVGTLGYMAPEYAWTGMFSEKSDIYS 681

Query:   600 FGVVLLEIICCRSNFEVNVSTADEVLLS-TWVYNCFVAGE--FNKLVEEEVDKITLERMV 656
             FGV++LEII        +    ++ L++  W   C   G    +K V +    + +ER V
Sbjct:   682 FGVLMLEIISGEKISRFSYGKEEKTLIAYAWESWCDTGGIDLLDKDVADSCRPLEVERCV 741

Query:   657 KTGLLCIQDEPNLRPSMKNVILMLEGTMEIP 687
             + GLLC+Q +P  RP+   ++ ML  T ++P
Sbjct:   742 QIGLLCVQHQPADRPNTLELLSMLTTTSDLP 772

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 358 (131.1 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
 Identities = 87/214 (40%), Positives = 124/214 (57%)

Query:   474 LLVYKHRSSKKLLVYEFMSKGSLADLLFN-LETRPL-WRDRVRIALDVARGLLYLHDECE 531
             LL +     +++LVYEFM +  L   LF+ ++ R L W+ R  I   + RGL+YLH +  
Sbjct:   571 LLGFCIEGEERMLVYEFMPENCLDAYLFDPVKQRLLDWKTRFNIIDGICRGLMYLHRDSR 630

Query:   532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGL 590
             ++IIH D+K  NIL+D++   KISDFGLA++   N+  +    V G+ GYMAPE+   GL
Sbjct:   631 LKIIHRDLKASNILLDENLNPKISDFGLARIFQGNEDEVSTVRVVGTYGYMAPEYAMGGL 690

Query:   591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE----EE 646
              + KSDV+S GV+LLEI+  R N     +      LS + +  +  GE   LV+    EE
Sbjct:   691 FSEKSDVFSLGVILLEIVSGRRNSSF-YNDGQNPNLSAYAWKLWNTGEDIALVDPVIFEE 749

Query:   647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVILML 680
               +  + R V  GLLC+QD  N RPS+  VI ML
Sbjct:   750 CFENEIRRCVHVGLLCVQDHANDRPSVATVIWML 783

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

GO:0009637 "response to blue light" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]

 Score = 356 (130.4 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
 Identities = 85/221 (38%), Positives = 130/221 (58%)

Query:   474 LLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR-PL-WRDRVRIALDVARGLLYLHDECE 531
             +L Y     +++L+YE+    SL   +F+ E R  L W  RV I   +ARG+LYLH++  
Sbjct:   524 ILGYCVDEEERMLIYEYQPNKSLDSFIFDKERRRELDWPKRVEIIKGIARGMLYLHEDSR 583

Query:   532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGL 590
             ++IIH D+K  N+L+D    AKISDFGLA+ L  ++T      V G+ GYM+PE+Q  G 
Sbjct:   584 LRIIHRDLKASNVLLDSDMNAKISDFGLARTLGGDETEANTTRVVGTYGYMSPEYQIDGY 643

Query:   591 ITVKSDVYSFGVVLLEIICCRSN--FEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD 648
              ++KSDV+SFGV++LEI+  R N  F  N      +L   W    F+  +  ++++E V+
Sbjct:   644 FSLKSDVFSFGVLVLEIVSGRRNRGFR-NEEHKLNLLGHAW--RQFLEDKAYEIIDEAVN 700

Query:   649 KITLE-----RMVKTGLLCIQDEPNLRPSMKNVILMLEGTM 684
             +   +     R++  GLLC+Q +P  RP+M  V+LML   M
Sbjct:   701 ESCTDISEVLRVIHIGLLCVQQDPKDRPNMSVVVLMLSSEM 741

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 356 (130.4 bits), Expect = 4.3e-45, Sum P(2) = 4.3e-45
 Identities = 86/218 (39%), Positives = 127/218 (58%)

Query:   483 KKLLVYEFMSKGSLADLLFNLETRPL--WRDRVRIALDVARGLLYLHDECEVQIIHCDIK 540
             +K+LVYE+M   SL   LF+   + L  W+ R  I   +ARGLLYLH +  ++IIH D+K
Sbjct:   597 EKMLVYEYMPNKSLDFFLFDETKQALIDWKLRFSIIEGIARGLLYLHRDSRLRIIHRDLK 656

Query:   541 LRNILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
             + N+L+D     KISDFG+A++   NQ       V G+ GYM+PE+   GL +VKSDVYS
Sbjct:   657 VSNVLLDAEMNPKISDFGMARIFGGNQNEANTVRVVGTYGYMSPEYAMEGLFSVKSDVYS 716

Query:   600 FGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLE-----R 654
             FGV+LLEI+  + N  +  S    ++   W Y  +  G   +LV+ ++ ++T       R
Sbjct:   717 FGVLLLEIVSGKRNTSLRSSEHGSLIGYAW-Y-LYTHGRSEELVDPKI-RVTCSKREALR 773

Query:   655 MVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFP 692
              +   +LC+QD    RP+M +V+LMLE   +   LA P
Sbjct:   774 CIHVAMLCVQDSAAERPNMASVLLMLES--DTATLAAP 809

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2197729 SD1-29 "S-domain-1 29" [Arabidopsis thaliana (taxid:3702)]

 Score = 345 (126.5 bits), Expect = 8.8e-45, Sum P(2) = 8.8e-45
 Identities = 91/236 (38%), Positives = 131/236 (55%)

Query:   474 LLVYKHRSSKKLLVYEFMSKGSLADLLFN--LETRPLWRDRVRIALDVARGLLYLHDECE 531
             LL Y     +KLL+YEFM   SL   +F+  L+    W  R  I   +ARGLLYLH +  
Sbjct:   547 LLGYCIDGEEKLLIYEFMVNKSLDIFIFDPCLKFELDWPKRFNIIQGIARGLLYLHRDSR 606

Query:   532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ-TGIVAGVRGSRGYMAPEWQNSGL 590
             +++IH D+K+ NIL+DD    KISDFGLA++    Q       V G+ GYM+PE+  +GL
Sbjct:   607 LRVIHRDLKVSNILLDDRMNPKISDFGLARMFQGTQYQDNTRRVVGTLGYMSPEYAWAGL 666

Query:   591 ITVKSDVYSFGVVLLEIICCR--SNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD 648
              + KSD+YSFGV++LEII  +  S F +    +  +L  TW   C   G  N L  +  D
Sbjct:   667 FSEKSDIYSFGVLMLEIISGKRISRF-IYGDESKGLLAYTWDSWCETGGS-NLLDRDLTD 724

Query:   649 K---ITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPPLSHVNSLS 701
                   + R V+ GLLC+Q E   RP+   V+ ML    ++P+    P+  V++L+
Sbjct:   725 TCQAFEVARCVQIGLLCVQHEAVDRPNTLQVLSMLTSATDLPVPK-QPIFAVHTLN 779

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00024697001 SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (729 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	702
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	6e-34
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-29
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	8e-29
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	4e-28
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	9e-28
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-27
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-27
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-23
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-21
pfam01453	109	pfam01453, B_lectin, D-mannose binding lectin	5e-20
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	5e-20
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-19
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	1e-18
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-18
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-17
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-17
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-17
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	3e-17
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-17
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	5e-17
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	8e-17
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-16
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-16
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	3e-16
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	4e-16
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	1e-15
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-15
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	3e-15
cd00028	116	cd00028, B_lectin, Bulb-type mannose-specific lect	6e-15
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-14
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-14
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-14
smart00108	114	smart00108, B_lectin, Bulb-type mannose-specific l	2e-14
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-14
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-14
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-14
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-14
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	5e-14
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	6e-14
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-13
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-13
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-13
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	1e-13
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-13
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-13
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	3e-13
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-13
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	3e-13
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	4e-13
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	6e-13
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-12
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-12
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	1e-12
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	1e-12
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	2e-12
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	2e-12
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-12
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-12
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	4e-12
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	4e-12
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	4e-12
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-12
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	7e-12
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	7e-12
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	8e-12
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	9e-12
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	9e-12
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	9e-12
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	1e-11
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-11
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	1e-11
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-11
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-11
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	2e-11
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-11
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-11
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	3e-11
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	4e-11
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	5e-11
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	7e-11
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	9e-11
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	9e-11
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	9e-11
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-10
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-10
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-10
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	2e-10
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-10
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-10
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	2e-10
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-10
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-10
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	2e-10
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-10
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	4e-10
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	4e-10
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	4e-10
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	4e-10
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	5e-10
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	5e-10
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	5e-10
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	6e-10
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	9e-10
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-09
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	1e-09
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	1e-09
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	1e-09
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	1e-09
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-09
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-09
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-09
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-09
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	2e-09
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-09
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	2e-09
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-09
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	3e-09
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	3e-09
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-09
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	4e-09
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	5e-09
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	6e-09
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	7e-09
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	7e-09
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	8e-09
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	8e-09
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	9e-09
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	9e-09
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	9e-09
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	9e-09
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	1e-08
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	1e-08
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	1e-08
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-08
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-08
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	2e-08
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-08
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-08
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	2e-08
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	2e-08
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	2e-08
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-08
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	2e-08
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	2e-08
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-08
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	3e-08
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	3e-08
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	3e-08
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	3e-08
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	3e-08
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	3e-08
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	4e-08
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	4e-08
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-08
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	4e-08
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	5e-08
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	6e-08
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	7e-08
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	7e-08
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	7e-08
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	7e-08
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	8e-08
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	8e-08
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	8e-08
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	9e-08
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	9e-08
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-07
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	1e-07
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-07
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	1e-07
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	1e-07
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	1e-07
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-07
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-07
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-07
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	1e-07
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	1e-07
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	2e-07
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-07
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-07
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-07
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	2e-07
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-07
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-07
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	3e-07
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	3e-07
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	3e-07
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	4e-07
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	4e-07
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	4e-07
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	4e-07
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	5e-07
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	5e-07
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	5e-07
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	5e-07
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	6e-07
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	6e-07
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	7e-07
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	7e-07
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-06
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-06
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-06
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	1e-06
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-06
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-06
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-06
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-06
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	2e-06
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-06
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	2e-06
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-06
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	3e-06
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-06
pfam00954	110	pfam00954, S_locus_glycop, S-locus glycoprotein fa	4e-06
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	5e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	5e-06
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	6e-06
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	8e-06
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	9e-06
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	1e-05
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	1e-05
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-05
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-05
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	2e-05
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-05
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-05
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	3e-05
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	3e-05
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	5e-05
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	5e-05
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	6e-05
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	7e-05
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	8e-05
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	8e-05
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	8e-05
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	9e-05
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	1e-04
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	1e-04
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	1e-04
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	1e-04
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	1e-04
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	1e-04
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	1e-04
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-04
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-04
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	2e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	2e-04
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	2e-04
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	2e-04
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-04
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-04
cd01098	84	cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain	2e-04
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	3e-04
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-04
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	3e-04
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	3e-04
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-04
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	4e-04
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	4e-04
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	4e-04
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	5e-04
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	5e-04
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	5e-04
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	6e-04
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	0.001
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	0.001
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	0.001
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	0.001
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	0.001
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	0.001
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	0.001
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	0.003
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	0.003
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  128 bits (325), Expect = 6e-34
 Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 6/124 (4%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV E+   GSL DLL   E +    + +RI L +  GL YLH      IIH D+K  NIL
Sbjct: 68  LVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENIL 124

Query: 546 ID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGVV 603
           +D D+ + K++DFGL+KLL  +   ++  + G+  YMAPE     G  + KSD++S GV+
Sbjct: 125 LDSDNGKVKLADFGLSKLL-TSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVI 183

Query: 604 LLEI 607
           L E+
Sbjct: 184 LYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  117 bits (295), Expect = 2e-29
 Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 6/130 (4%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV E+   G L DLL          +       +   L YLH +    I+H D+K  NIL
Sbjct: 74  LVMEYCEGGDLFDLLKKRGRLSE-DEARFYLRQILSALEYLHSK---GIVHRDLKPENIL 129

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
           +D+    K++DFGLA+ L P +   +    G+  YMAPE           D++S GV+L 
Sbjct: 130 LDEDGHVKLADFGLARQLDPGEK--LTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILY 187

Query: 606 EIICCRSNFE 615
           E++  +  F 
Sbjct: 188 ELLTGKPPFP 197

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  115 bits (290), Expect = 8e-29
 Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 23/200 (11%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            +V E+M  G L   L     +    D +  AL +ARG+ YL  +     IH D+  RN 
Sbjct: 77  YIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNC 133

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAG----VRGSRGYMAPEWQNSGLITVKSDVYSF 600
           L+ ++   KISDFGL++ L  +      G    +R    +MAPE    G  T KSDV+SF
Sbjct: 134 LVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIR----WMAPESLKEGKFTSKSDVWSF 189

Query: 601 GVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGL 660
           GV+L EI          +S  +       V      G           ++  + M++   
Sbjct: 190 GVLLWEIFTLGEQPYPGMSNEE-------VLEYLKNGYRLPQPPNCPPEL-YDLMLQ--- 238

Query: 661 LCIQDEPNLRPSMKNVILML 680
            C  ++P  RP+   ++ +L
Sbjct: 239 -CWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  113 bits (285), Expect = 4e-28
 Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 26/202 (12%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           ++V E+M  G L D L     + L   D +  AL +ARG+ YL  +     IH D+  RN
Sbjct: 77  MIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARN 133

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAG----VRGSRGYMAPEWQNSGLITVKSDVYS 599
            L+ ++   KISDFGL++ L  +    V G    +R    +MAPE    G  T KSDV+S
Sbjct: 134 CLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIR----WMAPESLKEGKFTSKSDVWS 189

Query: 600 FGVVLLEII-CCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKT 658
           FGV+L EI       +   +S A+       V      G           ++  + M++ 
Sbjct: 190 FGVLLWEIFTLGEEPYP-GMSNAE-------VLEYLKKGYRLPKPPNCPPEL-YKLMLQ- 239

Query: 659 GLLCIQDEPNLRPSMKNVILML 680
              C  ++P  RP+   ++ +L
Sbjct: 240 ---CWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  112 bits (282), Expect = 9e-28
 Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 8/133 (6%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHC 537
                  LV E+   G L D L      PL   +  +IAL + RGL YLH      IIH 
Sbjct: 68  EDKDHLYLVMEYCEGGDLFDYLSRG--GPLSEDEAKKIALQILRGLEYLHSN---GIIHR 122

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL-ITVKSD 596
           D+K  NIL+D++   KI+DFGLAK L+ +    +    G+  YMAPE    G     K D
Sbjct: 123 DLKPENILLDENGVVKIADFGLAKKLLKSS-SSLTTFVGTPWYMAPEVLLGGNGYGPKVD 181

Query: 597 VYSFGVVLLEIIC 609
           V+S GV+L E++ 
Sbjct: 182 VWSLGVILYELLT 194

Length = 260

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  112 bits (282), Expect = 1e-27
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            +V E+M  G L D L     +   +D +++AL +A+G+ YL        +H D+  RN 
Sbjct: 77  YIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLES---KNFVHRDLAARNC 133

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEWQNSGLITVKSDVYS 599
           L+ ++   KISDFGL++ +  +      G     ++    +MAPE    G  T KSDV+S
Sbjct: 134 LVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIK----WMAPESLKDGKFTSKSDVWS 189

Query: 600 FGVVLLEIIC 609
           FGV+L EI  
Sbjct: 190 FGVLLWEIFT 199

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  111 bits (281), Expect = 2e-27
 Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 34/211 (16%)

Query: 485 LLVYEFMSKGSLADLL--------FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIH 536
            LV E+M  G L D L           ++    +D +  A+ +A+G+ YL      + +H
Sbjct: 72  YLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVH 128

Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEWQNSGLI 591
            D+  RN L+ +    KISDFGL++ +  +            +R    +MAPE    G+ 
Sbjct: 129 RDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIR----WMAPESLKDGIF 184

Query: 592 TVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI 650
           T KSDV+SFGV+L EI     + +   +S  +       V      G      E   D++
Sbjct: 185 TSKSDVWSFGVLLWEIFTLGATPYP-GLSNEE-------VLEYLRKGYRLPKPEYCPDEL 236

Query: 651 TLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
             E M    L C Q +P  RP+   ++  LE
Sbjct: 237 Y-ELM----LSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  100 bits (252), Expect = 1e-23
 Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 9/124 (7%)

Query: 489 EFMSKGSLADLL--FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI 546
           E++S GSL+ LL  F     P+ R   R    +  GL YLH      I+H DIK  NIL+
Sbjct: 81  EYVSGGSLSSLLKKFGKLPEPVIRKYTR---QILEGLAYLHSN---GIVHRDIKGANILV 134

Query: 547 DDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
           D     K++DFG AK L   +TG   G VRG+  +MAPE          +D++S G  ++
Sbjct: 135 DSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVI 194

Query: 606 EIIC 609
           E+  
Sbjct: 195 EMAT 198

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 94.7 bits (236), Expect = 1e-21
 Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 4/124 (3%)

Query: 486 LVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+MSKGSL D L + E + L     V +A  +A G+ YL        IH D+  RNI
Sbjct: 78  IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNI 134

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ ++   KI+DFGLA+L+  ++     G +    + APE  N G  T+KSDV+SFG++L
Sbjct: 135 LVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILL 194

Query: 605 LEII 608
            EI+
Sbjct: 195 TEIV 198

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin

 Score = 85.5 bits (212), Expect = 5e-20
 Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 9/111 (8%)

Query: 73  NITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPI--ADLVFDEPASFASMLDS 130
           N TVVW ANR      S+ TL L  DG L+L   +   + +  ++         A + D 
Sbjct: 1   NQTVVWVANRLNPLTDSSYTLILQSDGNLVL--YDGNGRVVWSSNTSGKGSGCVAVLQDD 58

Query: 131 GNFVLYSNRSGIIWESFSTPTDTILGGQSLEN----GEHLLSS-VTETNSS 176
           GN VLY N   ++W+SF  PTDT+L GQ   N    G   L+S  + T+ S
Sbjct: 59  GNLVLYDNSGKVLWQSFDHPTDTLLPGQKDGNVVIGGSRRLTSWKSNTDPS 109

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 89.8 bits (223), Expect = 5e-20
 Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 8/124 (6%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
            +V E+M+KGSL D L +     +    ++  ALDV  G+ YL    E   +H D+  RN
Sbjct: 76  YIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARN 132

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           +L+ +   AK+SDFGLAK     Q      V+    + APE       + KSDV+SFG++
Sbjct: 133 VLVSEDLVAKVSDFGLAKEASQGQDSGKLPVK----WTAPEALREKKFSTKSDVWSFGIL 188

Query: 604 LLEI 607
           L EI
Sbjct: 189 LWEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 89.4 bits (222), Expect = 1e-19
 Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 47/221 (21%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L+ E++  GSL D L     +   +  +  +  + +G+ YL  +   + IH D+  RNI
Sbjct: 84  RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNI 140

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS---RGYMAPEWQNSGLITVKSDVYSFG 601
           L++     KISDFGLAK+L  ++        G      Y APE   +   +  SDV+SFG
Sbjct: 141 LVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWY-APECLRTSKFSSASDVWSFG 199

Query: 602 VVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMV---K 657
           V L E+      +                        EF +++     ++ + R++   K
Sbjct: 200 VTLYELFTYGDPS-------------------QSPPAEFLRMIGIAQGQMIVTRLLELLK 240

Query: 658 TG-----------------LLCIQDEPNLRPSMKNVILMLE 681
            G                  LC + EP  RPS  ++IL+++
Sbjct: 241 EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVD 281

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 85.9 bits (213), Expect = 1e-18
 Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 6/126 (4%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQ-IIHCDIKLR 542
            +V E M  GSL + L     R L     + +A  VA G+ YL    E Q  IH D+  R
Sbjct: 77  YIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYL----EAQNYIHRDLAAR 132

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           N+L+ ++   K++DFGLA+++  +      G +    + APE       ++KSDV+SFG+
Sbjct: 133 NVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGI 192

Query: 603 VLLEII 608
           +L EI+
Sbjct: 193 LLTEIV 198

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 84.6 bits (210), Expect = 3e-18
 Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 13/125 (10%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V EF S GSL DLL     + L   ++  +  ++ +GL YLH      IIH DIK  NI
Sbjct: 74  IVMEFCSGGSLKDLL-KSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANI 129

Query: 545 LIDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFG 601
           L+      K+ DFGL+  L       T +     G+  +MAPE  N      K+D++S G
Sbjct: 130 LLTSDGEVKLIDFGLSAQLSDTKARNTMV-----GTPYWMAPEVINGKPYDYKADIWSLG 184

Query: 602 VVLLE 606
           +  +E
Sbjct: 185 ITAIE 189

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 83.1 bits (205), Expect = 1e-17
 Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 4/124 (3%)

Query: 486 LVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+MSKGSL D L + E R L   + V +A  VA G+ Y+     +  IH D++  NI
Sbjct: 77  IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANI 133

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ D    KI+DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++L
Sbjct: 134 LVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 193

Query: 605 LEII 608
            E++
Sbjct: 194 TELV 197

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 83.0 bits (205), Expect = 1e-17
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 4/125 (3%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
            ++ E+M  GSL D L   E   L  ++ + +A  +A G+ ++        IH D++  N
Sbjct: 76  YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAAN 132

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+ ++   KI+DFGLA+L+  N+     G +    + APE  N G  T+KSDV+SFG++
Sbjct: 133 ILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 192

Query: 604 LLEII 608
           L EI+
Sbjct: 193 LTEIV 197

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 84.4 bits (207), Expect = 2e-17
 Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 15/219 (6%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRV--RIALDVARGLLYLHD 528
           I  L  +        LV E++  GSL DLL  +  +    +     I   +   L YLH 
Sbjct: 60  IVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH- 118

Query: 529 ECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQT-----GIVAGVRGSRGYMA 582
                IIH DIK  NIL+D D    K+ DFGLAKLL    +      + +   G+ GYMA
Sbjct: 119 --SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA 176

Query: 583 PEW---QNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEF 639
           PE     +    +  SD++S G+ L E++     FE   +++        +         
Sbjct: 177 PEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILE-LPTPSL 235

Query: 640 NKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL 678
              +     ++  +         +  +P  R S  + + 
Sbjct: 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274

Length = 384

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 82.4 bits (204), Expect = 3e-17
 Identities = 61/224 (27%), Positives = 91/224 (40%), Gaps = 49/224 (21%)

Query: 480 RSSKKLLVYEFMSKGSLADLL---------FNLETRPLWRDRVRIALDVARGLLYLHDEC 530
                L+V E M+KG L   L               P  +  +++A ++A G+ YL    
Sbjct: 80  TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA--- 136

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLA-------------KLLMPNQTGIVAGVRGS 577
             + +H D+  RN ++ +    KI DFG+              K L+P        VR  
Sbjct: 137 AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLP--------VR-- 186

Query: 578 RGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAG 637
             +MAPE    G+ T KSDV+SFGVVL E+          +S  +EVL         + G
Sbjct: 187 --WMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN-EEVL------KFVIDG 237

Query: 638 EFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
               L  E      LE M     +C Q  P +RP+   ++  L+
Sbjct: 238 GHLDL-PENCPDKLLELM----RMCWQYNPKMRPTFLEIVSSLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 81.5 bits (202), Expect = 4e-17
 Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 8/123 (6%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV--RIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           +V E+M  GSLADLL   +      + V   IA  + +GL YLH +    IIH DIK  N
Sbjct: 76  IVLEYMDGGSLADLL---KKVGKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSN 130

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           +LI+     KI+DFG++K+L          V G+  YM+PE       +  +D++S G+ 
Sbjct: 131 LLINSKGEVKIADFGISKVLENTLDQCNTFV-GTVTYMSPERIQGESYSYAADIWSLGLT 189

Query: 604 LLE 606
           LLE
Sbjct: 190 LLE 192

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 81.2 bits (200), Expect = 5e-17
 Identities = 44/124 (35%), Positives = 73/124 (58%), Gaps = 4/124 (3%)

Query: 486 LVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ E+M+KGSL D L + E  + L    +  +  +A G+ Y+  +     IH D++  N+
Sbjct: 78  IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANV 134

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ +S   KI+DFGLA+++  N+     G +    + APE  N G  T+KSDV+SFG++L
Sbjct: 135 LVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 194

Query: 605 LEII 608
            EI+
Sbjct: 195 YEIV 198

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 81.0 bits (200), Expect = 8e-17
 Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 15/188 (7%)

Query: 489 EFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNILID 547
           EFM  GSL  +    +  P+  + + +IA+ V  GL YL++    +I+H DIK  NIL++
Sbjct: 83  EFMDCGSLDRIY--KKGGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVN 138

Query: 548 DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
              + K+ DFG++  L+     I     G+  YM+PE    G  TVKSDV+S G+ ++E+
Sbjct: 139 SRGQIKLCDFGVSGELI---NSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIEL 195

Query: 608 ICCRSNFEVNVSTADEVLLSTWVYN---CFVAGEFNKLVEEEVDKITLERMVKTGLLCIQ 664
              +  F  +    D       + +     V     +L   +  +  L   V     C+ 
Sbjct: 196 ALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPED-LRDFVD---ACLL 251

Query: 665 DEPNLRPS 672
            +P  RP+
Sbjct: 252 KDPTERPT 259

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 79.5 bits (196), Expect = 2e-16
 Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 5/133 (3%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+   G L  LL     RPL  D+V R  + +  GL +LH +   +I+H DIK  N+
Sbjct: 76  IVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNL 132

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
            +D     KI D G+AKLL  N T     + G+  Y++PE         KSDV++ GVVL
Sbjct: 133 FLDAYDNVKIGDLGVAKLLSDN-TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVL 191

Query: 605 LEIICCRSNFEVN 617
            E    +  F+ N
Sbjct: 192 YECCTGKHPFDAN 204

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 79.0 bits (195), Expect = 2e-16
 Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 15/128 (11%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ E M KGSL   L + E + L     + +A  VA G+ YL ++     IH D+  RNI
Sbjct: 79  IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNI 135

Query: 545 LIDDSWRAKISDFGLAKLL-----MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
           L+ +    K++DFGLA+L+     + +   I    +    + APE  + G  + KSDV+S
Sbjct: 136 LVGEDLVCKVADFGLARLIKEDVYLSSDKKI--PYK----WTAPEAASHGTFSTKSDVWS 189

Query: 600 FGVVLLEI 607
           FG++L E+
Sbjct: 190 FGILLYEM 197

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 78.9 bits (194), Expect = 3e-16
 Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 38/208 (18%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V EFM KGSL D L   + + L   + V +A  +A G+ Y+     +  IH D++  NI
Sbjct: 77  IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANI 133

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ D+   KI+DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++L
Sbjct: 134 LVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 193

Query: 605 LEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK-----------ITLE 653
            E++           T   V            G  N+ V E+V++            +L 
Sbjct: 194 TELV-----------TKGRVPYP---------GMVNREVLEQVERGYRMPCPQGCPESLH 233

Query: 654 RMVKTGLLCIQDEPNLRPSMKNVILMLE 681
            ++K   LC + +P+ RP+ + +   LE
Sbjct: 234 ELMK---LCWKKDPDERPTFEYIQSFLE 258

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 78.7 bits (195), Expect = 4e-16
 Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 33/161 (20%)

Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGY 580
            L YLH     +I+H DIK +NI +  +   K+ DFG++K+L  + T  +A  V G+  Y
Sbjct: 115 ALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVL--SSTVDLAKTVVGTPYY 169

Query: 581 MAPE-WQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEF 639
           ++PE  QN      KSD++S G VL E+   +  FE      + +L              
Sbjct: 170 LSPELCQNKPY-NYKSDIWSLGCVLYELCTLKHPFE-----GENLL-----------ELA 212

Query: 640 NKLVEEEVDKIT------LERMVKTGLLCIQDEPNLRPSMK 674
            K+++ +   I       L  +V +    +Q +P  RPS+ 
Sbjct: 213 LKILKGQYPPIPSQYSSELRNLVSS---LLQKDPEERPSIA 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 77.4 bits (190), Expect = 1e-15
 Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 4/124 (3%)

Query: 486 LVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ EFM+KGSL D L + E ++      +  +  +A G+ ++        IH D++  NI
Sbjct: 77  IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANI 133

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+  S   KI+DFGLA+++  N+     G +    + APE  N G  T+KSDV+SFG++L
Sbjct: 134 LVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 193

Query: 605 LEII 608
           +EI+
Sbjct: 194 MEIV 197

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 76.6 bits (189), Expect = 2e-15
 Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 5/119 (4%)

Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD 548
           E+M  GSL  +L  ++ R   R   +IA+ V +GL YLH++   +IIH D+K  NIL++ 
Sbjct: 79  EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNS 136

Query: 549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
             + K+ DFG++  L+ +      G   +  YMAPE       +VKSD++S G+ L+E+
Sbjct: 137 RGQIKLCDFGVSGQLVNSLAKTFVG---TSSYMAPERIQGNDYSVKSDIWSLGLSLIEL 192

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 76.2 bits (187), Expect = 3e-15
 Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 6/124 (4%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWR--DRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           +V E+MSKGSL D L   E     R    V +A  +A G+ Y+     +  +H D++  N
Sbjct: 77  IVTEYMSKGSLLDFLKG-EMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAAN 132

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++
Sbjct: 133 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 192

Query: 604 LLEI 607
           L E+
Sbjct: 193 LTEL 196

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin

 Score = 71.2 bits (175), Expect = 6e-15
 Identities = 41/121 (33%), Positives = 55/121 (45%), Gaps = 9/121 (7%)

Query: 34  SSLSPSGQHSWNSSSGLFQFGFYKQG--SGYSLGIWLVTSPNITVVWTANRDEQPMPSNA 91
           S+   SGQ    SS  LF+ GF+K    S     I    S   TVVW ANRD  P  S+ 
Sbjct: 1   SNPLSSGQTLV-SSGSLFELGFFKLIMQSRDYNLILYKGSSR-TVVWVANRDN-PSGSSC 57

Query: 92  TLALTMDGKLILKTEESKEKPI--ADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFST 149
           TL L  DG L++   +     +  ++           +LD GN VLY +    +W+SF  
Sbjct: 58  TLTLQSDGNLVI--YDGSGTVVWSSNTTRVNGNYVLVLLDDGNLVLYDSDGNFLWQSFDY 115

Query: 150 P 150
           P
Sbjct: 116 P 116

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 74.4 bits (183), Expect = 2e-14
 Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 489 EFMSKGSLADLLFNLETRPLWRDRV------RIALDVARGLLYLHDECEVQIIHCDIKLR 542
           E+   GSL  +   ++ R     R+      +IA  V +GL YLH     +IIH DIK  
Sbjct: 81  EYCEGGSLDSIYKKVKKR---GGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPS 134

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           NIL+    + K+ DFG++  L+ +  G   G   +  YMAPE       ++ SDV+S G+
Sbjct: 135 NILLTRKGQVKLCDFGVSGELVNSLAGTFTG---TSFYMAPERIQGKPYSITSDVWSLGL 191

Query: 603 VLLEIICCRSNFEVNVS-TADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGL- 660
            LLE+   R  F          + L +++ N        +L +E  + I      K  + 
Sbjct: 192 TLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNP----ELKDEPGNGIKWSEEFKDFIK 247

Query: 661 LCIQDEPNLRPS 672
            C++ +P  RP+
Sbjct: 248 QCLEKDPTRRPT 259

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 73.9 bits (182), Expect = 2e-14
 Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 4/130 (3%)

Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   +++ E+M  GSL   L   + +      V +   +A G+ YL +   V   H D+
Sbjct: 76  KSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYV---HRDL 132

Query: 540 KLRNILIDDSWRAKISDFGLAKLL-MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
             RNIL++ +   K+SDFGL++ L     T    G +    + APE       T  SDV+
Sbjct: 133 AARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVW 192

Query: 599 SFGVVLLEII 608
           SFG+V+ E++
Sbjct: 193 SFGIVMWEVM 202

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 73.4 bits (181), Expect = 2e-14
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 10/136 (7%)

Query: 479 HRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIH 536
             +S  L ++ E+   GSL  ++      P     V + +  V +GL YLH++    +IH
Sbjct: 68  IETSDSLYIILEYAENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLAYLHEQ---GVIH 122

Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKS 595
            DIK  NIL       K++DFG+A   + + +   A V G+  +MAPE  + SG  +  S
Sbjct: 123 RDIKAANILTTKDGVVKLADFGVA-TKLNDVSKDDASVVGTPYWMAPEVIEMSG-ASTAS 180

Query: 596 DVYSFGVVLLEIICCR 611
           D++S G  ++E++   
Sbjct: 181 DIWSLGCTVIELLTGN 196

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin

 Score = 69.6 bits (171), Expect = 2e-14
 Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 8/112 (7%)

Query: 39  SGQHSWNSSSGLFQFGFYK-QGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTM 97
           SGQ +  S + LF+ GF+          I   +S   TVVW ANRD  P+  + TL L  
Sbjct: 6   SGQ-TLVSGNSLFELGFFTLIMQNDYNLILYKSSSR-TVVWVANRDN-PVSDSCTLTLQS 62

Query: 98  DGKLILKTEESKEKPI--ADLVFDEPASFASMLDSGNFVLYSNRSGIIWESF 147
           DG L+L   +   + +  ++           +LD GN V+Y +    +W+SF
Sbjct: 63  DGNLVL--YDGDGRVVWSSNTTGANGNYVLVLLDDGNLVIYDSDGNFLWQSF 112

Length = 114

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 73.6 bits (181), Expect = 2e-14
 Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 12/132 (9%)

Query: 480 RSSKKLLVY-EFMSKGSLADLL--FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIH 536
           R    L ++ E +  GSLA LL  +     P+ R   R  L    GL YLHD      +H
Sbjct: 72  REEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILL---GLEYLHDR---NTVH 125

Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKS 595
            DIK  NIL+D +   K++DFG+AK ++          +GS  +MAPE     G   + +
Sbjct: 126 RDIKGANILVDTNGVVKLADFGMAKQVVEF--SFAKSFKGSPYWMAPEVIAQQGGYGLAA 183

Query: 596 DVYSFGVVLLEI 607
           D++S G  +LE+
Sbjct: 184 DIWSLGCTVLEM 195

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 73.4 bits (180), Expect = 2e-14
 Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV+EFM  G L+D L     +      + + LDV  G+ YL       +IH D+  RN L
Sbjct: 76  LVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCL 132

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
           + ++   K+SDFG+ + ++ +Q     G +    + +PE  +    + KSDV+SFGV++ 
Sbjct: 133 VGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMW 192

Query: 606 EIIC-------CRSNFEV 616
           E+          RSN EV
Sbjct: 193 EVFSEGKTPYENRSNSEV 210

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 73.1 bits (179), Expect = 2e-14
 Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 26/161 (16%)

Query: 462 ITFLCFLIAISSLLVYKHRSSKKLL----------VYEFMSKGSLADLL-----FNLETR 506
           +T   FL   + +    H++  +LL          V E MSKG+L + L       +   
Sbjct: 41  VTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKGNLVNFLRTRGRALVSVI 100

Query: 507 PLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN 566
            L    ++ +LDVA G+ YL  +   +++H D+  RNIL+ +   AK+SDFGLA++    
Sbjct: 101 QL----LQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARV---G 150

Query: 567 QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
             G V   +    + APE       + KSDV+S+GV+L E+
Sbjct: 151 SMG-VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEV 190

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 73.4 bits (181), Expect = 3e-14
 Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 20/131 (15%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E+M  GSL D++     R        +  +V +GL YLH +    +IH DIK  NIL
Sbjct: 92  VVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNIL 148

Query: 546 IDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLIT-----VKSDV 597
           +      K++DFG A  L      +  +V    G+  +MAPE     +I       K D+
Sbjct: 149 LSKDGSVKLADFGFAAQLTKEKSKRNSVV----GTPYWMAPE-----VIKRKDYGPKVDI 199

Query: 598 YSFGVVLLEII 608
           +S G++ +E+ 
Sbjct: 200 WSLGIMCIEMA 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 72.5 bits (178), Expect = 5e-14
 Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 7/142 (4%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRI-ALDVARGLLYLHDECEV 532
           L Y   +   L LV   M+ G L   ++N+        R    A  +  GL +LH     
Sbjct: 58  LAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR--- 114

Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           +I++ D+K  N+L+DD    +ISD GLA + +     I     G+ GYMAPE     +  
Sbjct: 115 RIVYRDLKPENVLLDDHGNVRISDLGLA-VELKGGKKIKGRA-GTPGYMAPEVLQGEVYD 172

Query: 593 VKSDVYSFGVVLLEIICCRSNF 614
              D ++ G  L E+I  RS F
Sbjct: 173 FSVDWFALGCTLYEMIAGRSPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 72.0 bits (177), Expect = 6e-14
 Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 15/138 (10%)

Query: 479 HRSSKKLLVY-EFMSKGSLADLLFNLETRPLWRDRVRI-ALDVARGLLYLHDECEVQIIH 536
           HR   K+ ++ E+ S G+L +LL +   R L    +R+  L +  GL YLH      I+H
Sbjct: 70  HRE--KVYIFMEYCSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLH---SHGIVH 122

Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG---YMAPEWQNSGLITV 593
            DIK  NI +D +   K+ DFG A  L  N T +   V+   G   YMAPE    G    
Sbjct: 123 RDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKG 182

Query: 594 K---SDVYSFGVVLLEII 608
               +D++S G V+LE+ 
Sbjct: 183 HGRAADIWSLGCVVLEMA 200

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 71.3 bits (175), Expect = 1e-13
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 12/128 (9%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            +V E +  GSL   L   + R   +  ++++LD A G+ YL  +     IH D+  RN 
Sbjct: 68  YIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNC 124

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-----YMAPEWQNSGLITVKSDVYS 599
           L+ ++   KISDFG+++     + G +  V          + APE  N G  T +SDV+S
Sbjct: 125 LVGENNVLKISDFGMSR----EEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWS 180

Query: 600 FGVVLLEI 607
           +G++L E 
Sbjct: 181 YGILLWET 188

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 71.7 bits (176), Expect = 1e-13
 Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 4/129 (3%)

Query: 481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIK 540
           SS+  L+ + M  G L D + N +     +  +   + +A+G+ YL    E +++H D+ 
Sbjct: 80  SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLA 136

Query: 541 LRNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
            RN+L+      KI+DFGLAKLL  ++      G +    +MA E     + T KSDV+S
Sbjct: 137 ARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWS 196

Query: 600 FGVVLLEII 608
           +GV + E++
Sbjct: 197 YGVTVWELM 205

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 71.2 bits (174), Expect = 1e-13
 Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 8/123 (6%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+M+KGSL D L +     L  D  ++ +LDV   + YL        +H D+  RN+
Sbjct: 77  IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNV 133

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ +   AK+SDFGL K     Q      V+    + APE       + KSDV+SFG++L
Sbjct: 134 LVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEALREKKFSTKSDVWSFGILL 189

Query: 605 LEI 607
            EI
Sbjct: 190 WEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 71.5 bits (175), Expect = 1e-13
 Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 26/212 (12%)

Query: 480 RSSKKLLVYEFMSKGSL-ADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHC 537
           R S+K+      S G+  +  L N + R L   D +  A  ++RG+ YL    E++++H 
Sbjct: 95  RESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYL---AEMKLVHR 151

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-----YMAPEWQNSGLIT 592
           D+  RN+L+ +  + KISDFGL++ +        + V+ S+G     +MA E     + T
Sbjct: 152 DLAARNVLVAEGRKMKISDFGLSRDVYEED----SYVKRSKGRIPVKWMAIESLFDHIYT 207

Query: 593 VKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL 652
            +SDV+SFGV+L EI+    N    ++          ++N    G        E  +   
Sbjct: 208 TQSDVWSFGVLLWEIVTLGGNPYPGIAPER-------LFNLLKTGY-----RMERPENCS 255

Query: 653 ERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM 684
           E M    L C + EP+ RP+  ++   LE  M
Sbjct: 256 EEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 70.8 bits (174), Expect = 1e-13
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 10/140 (7%)

Query: 486 LVYEFMSKGSLADLLFNLETR-PLWRDRVRI-ALDVARGLLYLHDECEVQIIHCDIKLRN 543
           LV + +  G   DL ++L  +     ++V+    ++   L YLH      IIH DIK  N
Sbjct: 77  LVVDLLLGG---DLRYHLSQKVKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDN 130

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+D+     I+DF +A  + P+   +     G+ GYMAPE       +V  D +S GV 
Sbjct: 131 ILLDEQGHVHITDFNIATKVTPDT--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVT 188

Query: 604 LLEIICCRSNFEVNVSTADE 623
             E +  +  +  +  T  +
Sbjct: 189 AYECLRGKRPYRGHSRTIRD 208

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 70.6 bits (173), Expect = 2e-13
 Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 24/196 (12%)

Query: 486 LVYEFMSKGSLADLLFNLET--RPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLR 542
           +V E+   G L+  +   +   + +    + RI + + RGL  LH++   +I+H D+K  
Sbjct: 76  IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSA 132

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFG 601
           NIL+  +   KI D G++K+L  N      G   +  YMAPE W+     + KSD++S G
Sbjct: 133 NILLVANDLVKIGDLGISKVLKKNMAKTQIG---TPHYMAPEVWKGRPY-SYKSDIWSLG 188

Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
            +L E+      FE   S  D       +      G++  +         L+  +++   
Sbjct: 189 CLLYEMATFAPPFEAR-SMQD-------LRYKVQRGKYPPIPPIYSQD--LQNFIRS--- 235

Query: 662 CIQDEPNLRPSMKNVI 677
            +Q +P LRP+   ++
Sbjct: 236 MLQVKPKLRPNCDKIL 251

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 70.6 bits (173), Expect = 3e-13
 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 5/124 (4%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV E++  GSL D L     R   R  +  A  + +G+ YL      + +H D+  RNIL
Sbjct: 84  LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNIL 140

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           ++   R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 141 VESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVV 200

Query: 604 LLEI 607
           L E+
Sbjct: 201 LYEL 204

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 70.3 bits (172), Expect = 3e-13
 Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 13/127 (10%)

Query: 489 EFMSKGSLADLLFNLET--RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI 546
           E++  GS+A LL N       L R+ VR  L   +GL YLH+     IIH DIK  NIL+
Sbjct: 86  EYVPGGSVAALLNNYGAFEETLVRNFVRQIL---KGLNYLHNR---GIIHRDIKGANILV 139

Query: 547 DDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEWQNSGLITVKSDVYSFG 601
           D+    KISDFG++K L  N            ++GS  +MAPE       T K+D++S G
Sbjct: 140 DNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLG 199

Query: 602 VVLLEII 608
            +++E++
Sbjct: 200 CLVVEML 206

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 70.2 bits (172), Expect = 3e-13
 Identities = 41/127 (32%), Positives = 71/127 (55%), Gaps = 6/127 (4%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + +    P  +D +   L VA+G+ YL  +   + +H D+  RN 
Sbjct: 73  LVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNC 129

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+S+  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 130 MLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFG 189

Query: 602 VVLLEII 608
           V+L E++
Sbjct: 190 VLLWELM 196

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 70.4 bits (172), Expect = 4e-13
 Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 30/140 (21%)

Query: 489 EFMSKGSLADLLFN---LETRPLW------------RDRVRIALDVARGLLYLHDECEVQ 533
           E+   G+L D L     LET P +            +  ++ A DVA G+ YL ++   Q
Sbjct: 83  EYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---Q 139

Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-----YMAPEWQNS 588
            IH D+  RN+L+ ++  +KI+DFGL++       G    V+ + G     +MA E  N 
Sbjct: 140 FIHRDLAARNVLVGENLASKIADFGLSR-------GEEVYVKKTMGRLPVRWMAIESLNY 192

Query: 589 GLITVKSDVYSFGVVLLEII 608
            + T KSDV+SFGV+L EI+
Sbjct: 193 SVYTTKSDVWSFGVLLWEIV 212

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 69.1 bits (170), Expect = 6e-13
 Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 6/141 (4%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ 533
           L Y  ++ +KL LV E+   G L   L         R R   A ++   L YLH    + 
Sbjct: 58  LHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAA-EIVLALEYLH---SLG 113

Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
           II+ D+K  NIL+D     K++DFGLAK L    +       G+  Y+APE         
Sbjct: 114 IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC-GTPEYLAPEVLLGKGYGK 172

Query: 594 KSDVYSFGVVLLEIICCRSNF 614
             D +S GV+L E++  +  F
Sbjct: 173 AVDWWSLGVLLYEMLTGKPPF 193

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 68.2 bits (167), Expect = 1e-12
 Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 10/138 (7%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E+M+ G L + L   + +      + +  DV   + YL        IH D+  RN L
Sbjct: 76  IVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCL 132

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
           + +    K+SDFGLA+ ++ +Q     G +    +  PE  +    + KSDV+SFGV++ 
Sbjct: 133 VGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMW 192

Query: 606 EIICC-------RSNFEV 616
           E+           SN EV
Sbjct: 193 EVFSEGKMPYERFSNSEV 210

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 69.1 bits (169), Expect = 1e-12
 Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 19/128 (14%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            V E +      DL   L +RPL +  ++     + RGL Y+H      ++H D+K  NI
Sbjct: 87  FVTELLG----TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNI 139

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSF 600
           LI+++   KI DFGLA++  P  TG V+    +R Y APE    WQ      V+ D++S 
Sbjct: 140 LINENCDLKICDFGLARIQDPQMTGYVS----TRYYRAPEIMLTWQKYD---VEVDIWSA 192

Query: 601 GVVLLEII 608
           G +  E++
Sbjct: 193 GCIFAEML 200

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 69.5 bits (170), Expect = 1e-12
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 8/116 (6%)

Query: 497 ADLLFNLETRPLW----RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRA 552
           +D     +T   W     D +R +  VA+G+ +L  +     IH D+  RN+L+ D   A
Sbjct: 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVA 251

Query: 553 KISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
           KI DFGLA+ +M +   +V G  R    +MAPE     + TV+SDV+S+G++L EI
Sbjct: 252 KICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 307

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 68.6 bits (168), Expect = 1e-12
 Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 11/97 (11%)

Query: 514 RIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL---MPNQTGI 570
           +I++ V RGL YL ++   +I+H D+K  NIL++     K+ DFG++  L   M N    
Sbjct: 103 KISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--- 157

Query: 571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
                G+R YM+PE       TV+SD++S G+ L+E+
Sbjct: 158 ---FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEM 191

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 68.5 bits (167), Expect = 2e-12
 Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 57/223 (25%)

Query: 485 LLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVARGLLYLHDECEVQII 535
           L+V E M+ G L   L +L            P  ++ +++A ++A G+ YL+ +   + +
Sbjct: 85  LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFV 141

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-----YMAPEWQNSGL 590
           H D+  RN ++   +  KI DFG+ + +           +G +G     +MAPE    G+
Sbjct: 142 HRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY----RKGGKGLLPVRWMAPESLKDGV 197

Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI 650
            T  SD++SFGVVL EI           S A++               +  L  E+V K 
Sbjct: 198 FTTSSDMWSFGVVLWEI----------TSLAEQ--------------PYQGLSNEQVLKF 233

Query: 651 TL------------ERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
            +            ER+     +C Q  P +RP+   ++ +L+
Sbjct: 234 VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 68.3 bits (167), Expect = 2e-12
 Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 16/199 (8%)

Query: 485 LLVYEFMSKGSLADLLF-NLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           L++ E+   G L + L    E+     D +  +  VA+G+ +L  +     IH D+  RN
Sbjct: 115 LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARN 171

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +L+      KI DFGLA+ +M +   +V G  R    +MAPE   + + T +SDV+S+G+
Sbjct: 172 VLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 231

Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLC 662
           +L EI      F +  +    + + +  Y     G +     E       + M      C
Sbjct: 232 LLWEI------FSLGSNPYPGMPVDSKFYKLIKEG-YRMAQPEHAPAEIYDIMKT----C 280

Query: 663 IQDEPNLRPSMKNVILMLE 681
              +P  RP+ K ++ ++ 
Sbjct: 281 WDADPLKRPTFKQIVQLIG 299

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 68.7 bits (168), Expect = 2e-12
 Identities = 50/157 (31%), Positives = 73/157 (46%), Gaps = 39/157 (24%)

Query: 477 YKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR----GLLYLHDECEV 532
           + H    ++L+ EFM  GSL       E   +  ++     DVAR    G+ YLH     
Sbjct: 141 FDHNGEIQVLL-EFMDGGSL-------EGTHIADEQF--LADVARQILSGIAYLHRR--- 187

Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT--------GIVAGVRGSRGYMAPE 584
            I+H DIK  N+LI+ +   KI+DFG++++L   QT        G +A       YM+PE
Sbjct: 188 HIVHRDIKPSNLLINSAKNVKIADFGVSRIL--AQTMDPCNSSVGTIA-------YMSPE 238

Query: 585 WQNSGLITVK-----SDVYSFGVVLLEIICCRSNFEV 616
             N+ L          D++S GV +LE    R  F V
Sbjct: 239 RINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGV 275

Length = 353

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 68.4 bits (167), Expect = 2e-12
 Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 26/160 (16%)

Query: 485 LLVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLLYLHDECEVQIIHCDIKLR 542
             V EF++ G   DL+F+++ +R     R R  A ++   L++LHD+    II+ D+KL 
Sbjct: 72  FFVMEFVNGG---DLMFHIQKSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLD 125

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLITVKSDV 597
           N+L+D     K++DFG+ K       GI  G       G+  Y+APE     L     D 
Sbjct: 126 NVLLDHEGHCKLADFGMCK------EGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDW 179

Query: 598 YSFGVVLLEIICCRSNFEVNVST-------ADEVLLSTWV 630
           ++ GV+L E++C  + FE             DEV+  TW+
Sbjct: 180 WAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWL 219

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 66.6 bits (163), Expect = 4e-12
 Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 8/125 (6%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +LV E    G L   L      P+  D   +A  VA G+ YL        +H D+  RN+
Sbjct: 71  MLVMELAPLGPLLKYLKKRREIPV-SDLKELAHQVAMGMAYLE---SKHFVHRDLAARNV 126

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS---RGYMAPEWQNSGLITVKSDVYSFG 601
           L+ +  +AKISDFG+++ L        A   G    + Y APE  N G  + KSDV+S+G
Sbjct: 127 LLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWY-APECINYGKFSSKSDVWSYG 185

Query: 602 VVLLE 606
           V L E
Sbjct: 186 VTLWE 190

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 66.8 bits (163), Expect = 4e-12
 Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 24/123 (19%)

Query: 511 DRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI-----DDSWRAKISDFGLAKLLMP 565
           + + I LDVA+G +YL     +  IH D+  RN L+     D     KI DFGLA+ +  
Sbjct: 107 ELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYK 163

Query: 566 NQTGIVAG-----VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-------CRSN 613
           +      G     VR    +MAPE    G  T +SDV+SFGV++ EI+          +N
Sbjct: 164 SDYYRKEGEGLLPVR----WMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN 219

Query: 614 FEV 616
            EV
Sbjct: 220 QEV 222

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 66.5 bits (163), Expect = 4e-12
 Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 12/143 (8%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ 533
           L Y  +  K L LV E++  G LA LL N+ +      R+ IA ++   L YLH      
Sbjct: 58  LYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIA-EIVLALEYLH---SNG 113

Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKL-LMPNQTGIVAG------VRGSRGYMAPEWQ 586
           IIH D+K  NILID +   K++DFGL+K+ L+  Q  +         + G+  Y+APE  
Sbjct: 114 IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVI 173

Query: 587 NSGLITVKSDVYSFGVVLLEIIC 609
                +   D +S G +L E + 
Sbjct: 174 LGQGHSKTVDWWSLGCILYEFLV 196

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 66.8 bits (164), Expect = 5e-12
 Identities = 38/156 (24%), Positives = 57/156 (36%), Gaps = 39/156 (25%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLYLHDECEVQIIHC 537
            V E+   G L   +         R    +     R         L YLH      IIH 
Sbjct: 79  FVLEYAPNGELLQYI---------RKYGSLDEKCTRFYAAEILLALEYLHS---KGIIHR 126

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLL----MPNQTGIVAGVRGSRG-------------- 579
           D+K  NIL+D     KI+DFG AK+L     P      A    S+               
Sbjct: 127 DLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTA 186

Query: 580 -YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
            Y++PE  N       SD+++ G ++ +++  +  F
Sbjct: 187 EYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPF 222

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 66.7 bits (163), Expect = 7e-12
 Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 41/150 (27%)

Query: 486 LVYEFMSKGSLADLL---------------FNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           +V E+ + G+L D L                  E     +D V  A  VARG+ +L  + 
Sbjct: 93  VVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK- 151

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRG-------SRG---- 579
             + IH D+  RN+L+ +    KI+DFGLA+            +         + G    
Sbjct: 152 --KCIHRDLAARNVLVTEDHVMKIADFGLAR-----------DIHHIDYYRKTTNGRLPV 198

Query: 580 -YMAPEWQNSGLITVKSDVYSFGVVLLEII 608
            +MAPE     + T +SDV+SFGV+L EI 
Sbjct: 199 KWMAPEALFDRVYTHQSDVWSFGVLLWEIF 228

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 66.3 bits (162), Expect = 7e-12
 Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 31/144 (21%)

Query: 486 LVYEFMSKGSL----------ADLLFNLETR----PLWR-DRVRIALDVARGLLYLHDEC 530
           +++E+++ G L          +D+            L   D + IA+ +A G+ YL    
Sbjct: 85  MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH- 143

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL-------MPNQTGIVAGVRGSRGYMAP 583
               +H D+  RN L+ +    KISDFGL++ +       + +++  +  VR    +M P
Sbjct: 144 --HFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKS--LLPVR----WMPP 195

Query: 584 EWQNSGLITVKSDVYSFGVVLLEI 607
           E    G  T +SD++SFGVVL EI
Sbjct: 196 EAILYGKFTTESDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 66.3 bits (162), Expect = 8e-12
 Identities = 51/164 (31%), Positives = 71/164 (43%), Gaps = 48/164 (29%)

Query: 484 KLLVYEFMSKGSLADLLFNLETRP--------LWRDRVRIALDVARGLLYLHDECEVQII 535
           + ++ E M+ G L   L   E RP          +D +  A DVA+G  YL    E   I
Sbjct: 84  RFILLELMAGGDLKSFL--RENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFI 138

Query: 536 HCDIKLRNILIDD---SWRAKISDFGLA-------------KLLMPNQTGIVAGVRGSRG 579
           H DI  RN L+        AKI+DFG+A             + ++P +            
Sbjct: 139 HRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIK------------ 186

Query: 580 YMAPEWQNSGLITVKSDVYSFGVVLLEIIC-------CRSNFEV 616
           +M PE    G+ T K+DV+SFGV+L EI          R+N EV
Sbjct: 187 WMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV 230

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 65.9 bits (160), Expect = 9e-12
 Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 30/143 (20%)

Query: 486 LVYEFMSKGSLADLLFN---LETRPLW------------RDRVRIALDVARGLLYLHDEC 530
           L  E+   G+L D L     LET P +            +  +  A DVARG+ YL    
Sbjct: 73  LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS--- 129

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-----YMAPEW 585
           + Q IH D+  RNIL+ +++ AKI+DFGL++       G    V+ + G     +MA E 
Sbjct: 130 QKQFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIES 182

Query: 586 QNSGLITVKSDVYSFGVVLLEII 608
            N  + T  SDV+S+GV+L EI+
Sbjct: 183 LNYSVYTTNSDVWSYGVLLWEIV 205

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 66.6 bits (163), Expect = 9e-12
 Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 19/136 (13%)

Query: 487 VYEFMSKGSLADLLFNLET-RPLWRDRVRI-ALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           V E+++ G   DL+F+++        R R  A ++  GL +LH+     II+ D+KL N+
Sbjct: 74  VMEYVNGG---DLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNV 127

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLITVKSDVYS 599
           L+D     KI+DFG+ K       GI+ GV      G+  Y+APE  +        D ++
Sbjct: 128 LLDSEGHIKIADFGMCK------EGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWA 181

Query: 600 FGVVLLEIICCRSNFE 615
            GV+L E++  +S FE
Sbjct: 182 LGVLLYEMLAGQSPFE 197

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 66.2 bits (161), Expect = 9e-12
 Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 30/143 (20%)

Query: 486 LVYEFMSKGSLADLLFN---LETRPLW------------RDRVRIALDVARGLLYLHDEC 530
           L  E+   G+L D L     LET P +            +  +  A DVARG+ YL  + 
Sbjct: 85  LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK- 143

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-----YMAPEW 585
             Q IH D+  RNIL+ +++ AKI+DFGL++       G    V+ + G     +MA E 
Sbjct: 144 --QFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIES 194

Query: 586 QNSGLITVKSDVYSFGVVLLEII 608
            N  + T  SDV+S+GV+L EI+
Sbjct: 195 LNYSVYTTNSDVWSYGVLLWEIV 217

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 65.9 bits (161), Expect = 1e-11
 Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 8/98 (8%)

Query: 514 RIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG 573
           +IA+ + + L YLH +  V  IH D+K  N+LI+ + + K+ DFG++  L+ +    +  
Sbjct: 107 KIAVSIVKALEYLHSKLSV--IHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDA 164

Query: 574 VRGSRGYMAPEW----QNSGLITVKSDVYSFGVVLLEI 607
             G + YMAPE      N     VKSDV+S G+ ++E+
Sbjct: 165 --GCKPYMAPERINPELNQKGYDVKSDVWSLGITMIEL 200

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 66.0 bits (161), Expect = 1e-11
 Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 7/146 (4%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ 533
           L Y  ++  KL L+ ++++ G L   L+  E       RV IA ++   L +LH   ++ 
Sbjct: 70  LHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIA-EIVLALDHLH---QLG 125

Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
           II+ DIKL NIL+D      ++DFGL+K  +  +        G+  YMAPE    G    
Sbjct: 126 IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGH 185

Query: 594 KS--DVYSFGVVLLEIICCRSNFEVN 617
               D +S GV+  E++   S F V+
Sbjct: 186 DKAVDWWSLGVLTFELLTGASPFTVD 211

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 65.6 bits (160), Expect = 1e-11
 Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 7/143 (4%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRI-ALDVARGLLYLHDECEV 532
           L Y + +   L LV   M+ G L   ++N+       +R    A ++  GL  LH E   
Sbjct: 65  LAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE--- 121

Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           +I++ D+K  NIL+DD    +ISD GLA  +   +T  + G  G+ GYMAPE   +   T
Sbjct: 122 RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET--IRGRVGTVGYMAPEVVKNERYT 179

Query: 593 VKSDVYSFGVVLLEIICCRSNFE 615
              D +  G ++ E+I  +S F 
Sbjct: 180 FSPDWWGLGCLIYEMIEGKSPFR 202

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 64.9 bits (158), Expect = 1e-11
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 3/122 (2%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E+MS G L + L     R      + +  DV  G+ YL  +   Q IH D+  RN L
Sbjct: 76  IVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCL 132

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
           +DD    K+SDFGL++ ++ ++     G +    +  PE       + KSDV++FGV++ 
Sbjct: 133 VDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMW 192

Query: 606 EI 607
           E+
Sbjct: 193 EV 194

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 65.0 bits (158), Expect = 2e-11
 Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 7/143 (4%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEV 532
           L Y   S   L LV   M+ G L   ++N+  R L  +RV   +  +  G+L+LH    +
Sbjct: 58  LAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLH---SM 114

Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
            I++ D+K  N+L+DD    ++SD GLA  L   +T  +    G+ GYMAPE       +
Sbjct: 115 DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT--ITQRAGTNGYMAPEILKEEPYS 172

Query: 593 VKSDVYSFGVVLLEIICCRSNFE 615
              D ++ G  + E++  R+ F+
Sbjct: 173 YPVDWFAMGCSIYEMVAGRTPFK 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 67.2 bits (164), Expect = 2e-11
 Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 27/216 (12%)

Query: 480 RSSK-KLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCD 538
           RS K   L++E++   +L+++L NL     W  R +IA+ +A+ L +LH  C   ++  +
Sbjct: 753 RSEKGAYLIHEYIEGKNLSEVLRNLS----WERRRKIAIGIAKALRFLHCRCSPAVVVGN 808

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           +    I+ID      +    L  LL  +    +     S  Y+APE + +  IT KSD+Y
Sbjct: 809 LSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFI-----SSAYVAPETRETKDITEKSDIY 862

Query: 599 SFGVVLLEIICCRS----NFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK---IT 651
            FG++L+E++  +S     F V+ S      +  W   C+     +  ++  +     + 
Sbjct: 863 GFGLILIELLTGKSPADAEFGVHGS------IVEWARYCYSDCHLDMWIDPSIRGDVSVN 916

Query: 652 LERMVKT---GLLCIQDEPNLRPSMKNVILMLEGTM 684
              +V+     L C   +P  RP   +V+  LE   
Sbjct: 917 QNEIVEVMNLALHCTATDPTARPCANDVLKTLESAS 952

Length = 968

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 14/127 (11%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLR 542
           +V E+   GS++D++  +  + L      IA       +GL YLH     + IH DIK  
Sbjct: 75  IVMEYCGAGSVSDIM-KITNKTL--TEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAG 128

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPE-WQNSGLITVKSDVYSF 600
           NIL+++  +AK++DFG++  L    T      V G+  +MAPE  Q  G    K+D++S 
Sbjct: 129 NILLNEEGQAKLADFGVSGQL--TDTMAKRNTVIGTPFWMAPEVIQEIGYNN-KADIWSL 185

Query: 601 GVVLLEI 607
           G+  +E+
Sbjct: 186 GITAIEM 192

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 64.3 bits (157), Expect = 3e-11
 Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 35/202 (17%)

Query: 486 LVYEFMSKGSLADLL-FNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKL 541
           LV  ++S GSL D++  +     L  D   IA    +V +GL YLH       IH DIK 
Sbjct: 76  LVMPYLSGGSLLDIMKSSYPRGGL--DEAIIATVLKEVLKGLEYLHSN---GQIHRDIKA 130

Query: 542 RNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR----GSRGYMAPE--WQNSGLITVKS 595
            NIL+ +    KI+DFG++  L          VR    G+  +MAPE   Q  G    K+
Sbjct: 131 GNILLGEDGSVKIADFGVSASLADG-GDRTRKVRKTFVGTPCWMAPEVMEQVHGY-DFKA 188

Query: 596 DVYSFGVVLLEIICCRSNFEVNVST--ADEVLLSTWVYNCFVAGEFNKLVEEEVDKI--- 650
           D++SFG+  +E+    + +    S     +VL+ T      +  +   L      K    
Sbjct: 189 DIWSFGITAIELATGAAPY----SKYPPMKVLMLT------LQNDPPSLETGADYKKYSK 238

Query: 651 TLERMVKTGLLCIQDEPNLRPS 672
           +  +M+    LC+Q +P+ RP+
Sbjct: 239 SFRKMIS---LCLQKDPSKRPT 257

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 64.6 bits (157), Expect = 3e-11
 Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 43/234 (18%)

Query: 465 LCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLL---------FNLETRPLWRDRVRI 515
           +  LI +S     K R    +++  FM  G L   L         F L  + L    VR 
Sbjct: 63  VIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTL----VRF 118

Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR 575
            +D+A G+ YL  +     IH D+  RN +++++    ++DFGL+K        I +G  
Sbjct: 119 MIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFGLSK-------KIYSGDY 168

Query: 576 GSRG--------YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS 627
             +G        ++A E     + T  SDV++FGV + EI+         V  ++     
Sbjct: 169 YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE----- 223

Query: 628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
             +YN  + G   K   + ++ +  E M +    C   EP  RPS +++   LE
Sbjct: 224 --IYNYLIKGNRLKQPPDCLEDV-YELMCQ----CWSPEPKCRPSFQHLRDQLE 270

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 63.9 bits (155), Expect = 4e-11
 Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 45/244 (18%)

Query: 443 DKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKH-----RSSKKLLVYEFMSKGSLA 497
           D++ D ++ +TVL+ C              S  V K+     + +K  ++ E++  GS  
Sbjct: 44  DEIEDIQQEITVLSQC-------------DSPYVTKYYGSYLKDTKLWIIMEYLGGGSAL 90

Query: 498 DLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKI 554
           DLL   E  PL  D  +IA    ++ +GL YLH E   + IH DIK  N+L+ +    K+
Sbjct: 91  DLL---EPGPL--DETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKL 142

Query: 555 SDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +DFG+A  L   Q      V G+  +MAPE         K+D++S G+  +E+   +   
Sbjct: 143 ADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIEL--AKGEP 199

Query: 615 EVNVSTADEVLLSTWVYN-CFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSM 673
             +     +VL      N   + G ++K ++E V+             C+  EP+ RP+ 
Sbjct: 200 PHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA------------CLNKEPSFRPTA 247

Query: 674 KNVI 677
           K ++
Sbjct: 248 KELL 251

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 63.9 bits (155), Expect = 5e-11
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 7/143 (4%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEV 532
           L Y + +   L LV   M+ G L   ++++        R V  A ++  GL  LH E   
Sbjct: 65  LAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE--- 121

Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           +I++ D+K  NIL+DD    +ISD GLA  +   QT  + G  G+ GYMAPE   +   T
Sbjct: 122 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNERYT 179

Query: 593 VKSDVYSFGVVLLEIICCRSNFE 615
              D ++ G +L E+I  +S F+
Sbjct: 180 FSPDWWALGCLLYEMIAGQSPFQ 202

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 63.2 bits (154), Expect = 7e-11
 Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 25/146 (17%)

Query: 480 RSSKKLLVYEFMSKGSLADLL------FNL------ETRPLWR-DRVRIALDVARGLLYL 526
                ++V+E+M  G L   L                   L     ++IA+ +A G++YL
Sbjct: 79  EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYL 138

Query: 527 HDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYM 581
             +     +H D+  RN L+      KI DFG+++ +       V G     +R    +M
Sbjct: 139 ASQ---HFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIR----WM 191

Query: 582 APEWQNSGLITVKSDVYSFGVVLLEI 607
            PE       T +SDV+SFGVVL EI
Sbjct: 192 PPESIMYRKFTTESDVWSFGVVLWEI 217

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 63.2 bits (154), Expect = 9e-11
 Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 11/98 (11%)

Query: 515 IALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGV 574
           IA+   + L YL +E  ++IIH D+K  NIL+D +   K+ DFG++  L+ +    +A  
Sbjct: 112 IAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS----IAKT 165

Query: 575 R--GSRGYMAPEWQNSGLIT---VKSDVYSFGVVLLEI 607
           R  G R YMAPE  +        V+SDV+S G+ L E+
Sbjct: 166 RDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEV 203

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 63.1 bits (153), Expect = 9e-11
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 21/137 (15%)

Query: 485 LLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVARGLLYLHDECEVQII 535
           L++ E M++G L   L +L            P  +  +++A ++A G+ YL+     + +
Sbjct: 85  LVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFV 141

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-----YMAPEWQNSGL 590
           H D+  RN ++ + +  KI DFG+ + +           +G +G     +M+PE    G+
Sbjct: 142 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY----RKGGKGLLPVRWMSPESLKDGV 197

Query: 591 ITVKSDVYSFGVVLLEI 607
            T  SDV+SFGVVL EI
Sbjct: 198 FTTYSDVWSFGVVLWEI 214

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 63.0 bits (153), Expect = 9e-11
 Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 16/129 (12%)

Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIA--LDVARGLLYLHDECEVQIIHCDIKLRNILI 546
           E+M+ GS++ LL        +++ V I     + RGL YLH+    QIIH D+K  N+LI
Sbjct: 83  EWMAGGSVSHLLSKYGA---FKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLI 136

Query: 547 DDSWR-AKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEWQNSGLITVKSDVYSF 600
           D + +  +I+DFG A  L    TG  AG     + G+  +MAPE           DV+S 
Sbjct: 137 DSTGQRLRIADFGAAARLAAKGTG--AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSV 194

Query: 601 GVVLLEIIC 609
           G V++E+  
Sbjct: 195 GCVIIEMAT 203

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 62.7 bits (153), Expect = 1e-10
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV E+M    L+++L + E RPL   +V+     + +G+ Y+H      I+H D+K  N+
Sbjct: 76  LVMEYMP-SDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANL 130

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE 584
           LI      KI+DFGLA+L    +  + +    +R Y APE
Sbjct: 131 LISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPE 170

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 62.4 bits (151), Expect = 1e-10
 Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 35/239 (14%)

Query: 443 DKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFN 502
           D++ D ++ +TVL+ C            ++       + +K  ++ E++  GS  DLL  
Sbjct: 44  DEIEDIQQEITVLSQCDSPY--------VTKYYGSYLKGTKLWIIMEYLGGGSALDLL-- 93

Query: 503 LETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGL 559
               P   D  +IA    ++ +GL YLH E   + IH DIK  N+L+ +    K++DFG+
Sbjct: 94  -RAGPF--DEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGV 147

Query: 560 AKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVS 619
           A  L   Q      V G+  +MAPE         K+D++S G+  +E+   +     +  
Sbjct: 148 AGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDSKADIWSLGITAIEL--AKGEPPNSDM 204

Query: 620 TADEVLLSTWVYNC-FVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
               VL      N   + GEF+K  +E +D             C+  +P+ RP+ K ++
Sbjct: 205 HPMRVLFLIPKNNPPTLTGEFSKPFKEFIDA------------CLNKDPSFRPTAKELL 251

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 62.5 bits (152), Expect = 2e-10
 Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 32/215 (14%)

Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCD 538
           R     LV E+   GS +D+L  +  +PL    +  I     +GL YLH       IH D
Sbjct: 86  REHTAWLVMEY-CLGSASDIL-EVHKKPLQEVEIAAICHGALQGLAYLHSHER---IHRD 140

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE---WQNSGLITVKS 595
           IK  NIL+ +    K++DFG A L+ P  + +     G+  +MAPE     + G    K 
Sbjct: 141 IKAGNILLTEPGTVKLADFGSASLVSPANSFV-----GTPYWMAPEVILAMDEGQYDGKV 195

Query: 596 DVYSFGVVLLEIICCRSN-FEVNVSTA-------DEVLLST--WVYNCFVAGEFNKLVEE 645
           DV+S G+  +E+   +   F +N  +A       D   LS+  W      +  F   V+ 
Sbjct: 196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDW------SDYFRNFVDS 249

Query: 646 EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML 680
            + KI  +R   +    ++    LR     VI+ L
Sbjct: 250 CLQKIPQDRP--SSEELLKHRFVLRERPPTVIIDL 282

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 61.8 bits (150), Expect = 2e-10
 Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 12/139 (8%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V EFM  G L + L   + + L +D +  +  DV  G+ YL        IH D+  RN 
Sbjct: 76  IVTEFMENGCLLNYLRQRQGK-LSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNC 131

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+  +   K+SDFG+ + ++ ++    +G +    +  PE  N    + KSDV+SFGV++
Sbjct: 132 LVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLM 191

Query: 605 LEIIC-------CRSNFEV 616
            E+          +SN+EV
Sbjct: 192 WEVFTEGKMPFEKKSNYEV 210

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 61.8 bits (150), Expect = 2e-10
 Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 6/124 (4%)

Query: 486 LVYEFMSKGSLADLL--FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           ++ EFM+ G+L D L   N +        + +A  ++  + YL  +     IH D+  RN
Sbjct: 79  IITEFMTYGNLLDYLRECNRQEVNAVV-LLYMATQISSAMEYLEKK---NFIHRDLAARN 134

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
            L+ ++   K++DFGL++L+  +     AG +    + APE       ++KSDV++FGV+
Sbjct: 135 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 194

Query: 604 LLEI 607
           L EI
Sbjct: 195 LWEI 198

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 62.0 bits (150), Expect = 2e-10
 Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 16/166 (9%)

Query: 443 DKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFN 502
           D++ D ++ +TVL+ C        +     S L    + +K  ++ E++  GS  DLL  
Sbjct: 44  DEIEDIQQEITVLSQCDSPYITRYY----GSYL----KGTKLWIIMEYLGGGSALDLL-- 93

Query: 503 LETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK 561
            +  PL    +   L ++ +GL YLH E   + IH DIK  N+L+ +    K++DFG+A 
Sbjct: 94  -KPGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAG 149

Query: 562 LLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
            L   Q      V G+  +MAPE         K+D++S G+  +E+
Sbjct: 150 QLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 194

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 61.9 bits (150), Expect = 2e-10
 Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 7/142 (4%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRI-ALDVARGLLYLHDECEV 532
           L Y + +   L LV   M+ G L   ++N+       +R    A ++  GL  LH E   
Sbjct: 65  LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE--- 121

Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
             ++ D+K  NIL+DD    +ISD GLA + +P +   + G  G+ GYMAPE  N+   T
Sbjct: 122 NTVYRDLKPENILLDDYGHIRISDLGLA-VKIP-EGESIRGRVGTVGYMAPEVLNNQRYT 179

Query: 593 VKSDVYSFGVVLLEIICCRSNF 614
           +  D +  G ++ E+I  +S F
Sbjct: 180 LSPDYWGLGCLIYEMIEGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 62.4 bits (151), Expect = 2e-10
 Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 8/124 (6%)

Query: 489 EFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNILID 547
           E M  GSL  +L   E + +  + + ++++ V RGL YL ++   QI+H D+K  NIL++
Sbjct: 83  EHMDGGSLDQVL--KEAKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVN 138

Query: 548 DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
                K+ DFG++  L+ +   +     G+R YM+PE       +V+SD++S G+ L+E+
Sbjct: 139 SRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEL 195

Query: 608 ICCR 611
              R
Sbjct: 196 AIGR 199

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 61.4 bits (149), Expect = 2e-10
 Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 10/124 (8%)

Query: 489 EFMSKGSLADLL--FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI 546
           E+M  GS+ D L  +   T  + R   R  L+   G+ YLH      I+H DIK  NIL 
Sbjct: 84  EYMPGGSVKDQLKAYGALTETVTRKYTRQILE---GVEYLHSN---MIVHRDIKGANILR 137

Query: 547 DDSWRAKISDFGLAKLL--MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           D +   K+ DFG +K L  + +    +  V G+  +M+PE  +      K+DV+S G  +
Sbjct: 138 DSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTV 197

Query: 605 LEII 608
           +E++
Sbjct: 198 VEML 201

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 62.0 bits (150), Expect = 2e-10
 Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 13/156 (8%)

Query: 454 VLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRV 513
           V+AG +GS  ++C L+ I         +S   LV + M  G L D +   + R   +D +
Sbjct: 62  VMAG-VGS-PYVCRLLGIC-------LTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLL 112

Query: 514 RIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA- 572
              + +A+G+ YL    EV+++H D+  RN+L+      KI+DFGLA+LL  ++T   A 
Sbjct: 113 NWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHAD 169

Query: 573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
           G +    +MA E       T +SDV+S+GV + E++
Sbjct: 170 GGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELM 205

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 61.1 bits (149), Expect = 3e-10
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 7/134 (5%)

Query: 480 RSSKKL-LVYEFMSKGSLADLLFNL--ETRPLWRDRV-RIALDVARGLLYLH--DECEVQ 533
           RS++ L +V E+   G LA L+     E + +  + + RI   +   L   H   +    
Sbjct: 71  RSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT 130

Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
           ++H D+K  NI +D +   K+ DFGLAK+L  + +       G+  YM+PE  N      
Sbjct: 131 VLHRDLKPANIFLDANNNVKLGDFGLAKIL-GHDSSFAKTYVGTPYYMSPEQLNHMSYDE 189

Query: 594 KSDVYSFGVVLLEI 607
           KSD++S G ++ E+
Sbjct: 190 KSDIWSLGCLIYEL 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 60.6 bits (147), Expect = 4e-10
 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 11/139 (7%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV E+++ G  A L+  L   P    +  IA +V  G+  LH      IIH DIK  N+L
Sbjct: 74  LVMEYLNGGDCASLIKTLGGLPEDWAKQYIA-EVVLGVEDLHQR---GIIHRDIKPENLL 129

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
           ID +   K++DFGL++  + N+  +     G+  Y+APE          SD +S G V+ 
Sbjct: 130 IDQTGHLKLTDFGLSRNGLENKKFV-----GTPDYLAPETILGVGDDKMSDWWSLGCVIF 184

Query: 606 EIICCRSNFEVNVSTADEV 624
           E +     F     T D V
Sbjct: 185 EFLFGYPPFHAE--TPDAV 201

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 60.7 bits (148), Expect = 4e-10
 Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 28/174 (16%)

Query: 442 NDKVNDKRKLLTVLAGCLGS-IT--FLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLAD 498
            D++ D ++ +  L+ C    IT  +  FL           + SK  ++ E+   GS  D
Sbjct: 40  EDEIEDIQQEIQFLSQCRSPYITKYYGSFL-----------KGSKLWIIMEYCGGGSCLD 88

Query: 499 LLFNLETRPLWRDRVRIA---LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           LL   +   L  D   IA    +V  GL YLH+E     IH DIK  NIL+ +    K++
Sbjct: 89  LL---KPGKL--DETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLA 140

Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGVVLLEII 608
           DFG++  L    +     V G+  +MAPE  + SG    K+D++S G+  +E+ 
Sbjct: 141 DFGVSGQLTSTMSKRNTFV-GTPFWMAPEVIKQSGYDE-KADIWSLGITAIELA 192

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 60.5 bits (147), Expect = 4e-10
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 6/131 (4%)

Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCD 538
            +   ++V E    GSL D L            +   A+ +A G+ YL  +   + IH D
Sbjct: 66  LTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRD 122

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIV--AGVRGSRGYMAPEWQNSGLITVKSD 596
           +  RNIL+    + KI DFGL + L  N+   V    ++    + APE   +   +  SD
Sbjct: 123 LAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASD 182

Query: 597 VYSFGVVLLEI 607
           V+ FGV L E+
Sbjct: 183 VWMFGVTLWEM 193

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 60.7 bits (147), Expect = 4e-10
 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 11/119 (9%)

Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD 548
           EFM  GSL D+   +    L R    IA+ V +GL YL     ++I+H D+K  N+L++ 
Sbjct: 79  EFMDGGSL-DVYRKIPEHVLGR----IAVAVVKGLTYLWS---LKILHRDVKPSNMLVNT 130

Query: 549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
             + K+ DFG++  L+     I     G+  YMAPE  +     + SDV+S G+  +E+
Sbjct: 131 RGQVKLCDFGVSTQLV---NSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMEL 186

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 61.4 bits (149), Expect = 5e-10
 Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 511 DRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI 570
           D +  +  VARG+ +L      + IH D+  RNIL+ ++   KI DFGLA+ +  +   +
Sbjct: 174 DLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV 230

Query: 571 VAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
             G  R    +MAPE     + T +SDV+SFGV+L EI
Sbjct: 231 RKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEI 268

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 60.8 bits (147), Expect = 5e-10
 Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 7/142 (4%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEV 532
           L Y + +   L LV   M+ G L   ++N+        R +  A ++  GL  L  E   
Sbjct: 65  LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE--- 121

Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           +I++ D+K  NIL+DD    +ISD GLA  +   +T  V G  G+ GYMAPE  N+   T
Sbjct: 122 RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET--VRGRVGTVGYMAPEVINNEKYT 179

Query: 593 VKSDVYSFGVVLLEIICCRSNF 614
              D +  G ++ E+I  +S F
Sbjct: 180 FSPDWWGLGCLIYEMIQGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 61.2 bits (148), Expect = 5e-10
 Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 23/137 (16%)

Query: 491 MSKGSLADLLFN-------------LETRPLWR------DRVRIALDVARGLLYLHDECE 531
             +   A +LF+              ET  LW+      D +  +  VARG+ +L     
Sbjct: 136 RIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASR-- 193

Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEWQNSGL 590
            + IH D+  RNIL+ ++   KI DFGLA+ +  +   +  G  R    +MAPE     +
Sbjct: 194 -KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKV 252

Query: 591 ITVKSDVYSFGVVLLEI 607
            T +SDV+SFGV+L EI
Sbjct: 253 YTTQSDVWSFGVLLWEI 269

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 60.2 bits (146), Expect = 6e-10
 Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 15/149 (10%)

Query: 468 LIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLF--NLETRPLW---RDRVRIALDVARG 522
           LI +        +  K +++  FM  G L   L    L   P     +  ++  +D+A G
Sbjct: 66  LIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALG 125

Query: 523 LLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN----QTGIVAGVRGSR 578
           + YL +      IH D+  RN ++ +     ++DFGL+K +       Q  I    +   
Sbjct: 126 MEYLSNR---NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRI---AKMPV 179

Query: 579 GYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
            ++A E     + T KSDV++FGV + EI
Sbjct: 180 KWIAIESLADRVYTSKSDVWAFGVTMWEI 208

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 59.5 bits (144), Expect = 9e-10
 Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 5/131 (3%)

Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   ++V E+M  GSL   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 76  KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDL 132

Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNIL++ +   K+SDFGL+++L   P       G +    + APE       T  SDV
Sbjct: 133 AARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDV 192

Query: 598 YSFGVVLLEII 608
           +S+G+V+ E++
Sbjct: 193 WSYGIVMWEVM 203

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 59.3 bits (143), Expect = 1e-09
 Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 10/125 (8%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E +  G     L     R   ++ +++  + A G+ YL  +     IH D+  RN L
Sbjct: 70  IVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCL 126

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR----GYMAPEWQNSGLITVKSDVYSFG 601
           + +    KISDFG+++     + G+ A   G +     + APE  N G  + +SDV+SFG
Sbjct: 127 VTEKNVLKISDFGMSR---EEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFG 183

Query: 602 VVLLE 606
           ++L E
Sbjct: 184 ILLWE 188

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 60.2 bits (146), Expect = 1e-09
 Identities = 47/148 (31%), Positives = 67/148 (45%), Gaps = 10/148 (6%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ 533
           L Y  +    L LV E+   G L  LL N        D  +  L  A  +L +H   ++ 
Sbjct: 66  LQYAFQDKDNLYLVMEYQPGGDLLSLL-NRYEDQFDEDMAQFYL--AELVLAIHSVHQMG 122

Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS----- 588
            +H DIK  N+LID +   K++DFG A  L  N+        G+  Y+APE   +     
Sbjct: 123 YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDG 182

Query: 589 -GLITVKSDVYSFGVVLLEIICCRSNFE 615
            G   V+ D +S GV+  E+I  RS F 
Sbjct: 183 KGTYGVECDWWSLGVIAYEMIYGRSPFH 210

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 59.4 bits (144), Expect = 1e-09
 Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 13/137 (9%)

Query: 481 SSKKLLVYEFMSKGSLADLLFNLETRPLW-------RDRVRIALDVARGLLYLHDECEVQ 533
                ++Y +M+ G+L   L                +  V +A+ +A G+ YLH   +  
Sbjct: 81  GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRG 137

Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR--GYMAPEWQNSGLI 591
           +IH DI  RN +ID+  + KI+D  L++ L P     + G   +R   +MA E   +   
Sbjct: 138 VIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCL-GDNENRPVKWMALESLVNKEY 196

Query: 592 TVKSDVYSFGVVLLEII 608
           +  SDV+SFGV+L E++
Sbjct: 197 SSASDVWSFGVLLWELM 213

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 60.0 bits (146), Expect = 1e-09
 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 19/134 (14%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV   M     ADL   ++ + L  D ++ +   + RGL Y+H      IIH D+K  NI
Sbjct: 97  LVTHLMG----ADLNNIVKCQKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNI 149

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSF 600
            +++    KI DFGLA+      TG VA    +R Y APE    W +        D++S 
Sbjct: 150 AVNEDCELKILDFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMH---YNQTVDIWSV 202

Query: 601 GVVLLEIICCRSNF 614
           G ++ E++  ++ F
Sbjct: 203 GCIMAELLTGKTLF 216

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 60.0 bits (145), Expect = 1e-09
 Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 23/172 (13%)

Query: 511 DRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI 570
           D +  +  VA+G+ +L      + IH D+  RNIL+ ++   KI DFGLA+ +  +   +
Sbjct: 180 DLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV 236

Query: 571 VAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW 629
             G  R    +MAPE     + T++SDV+SFGV+L EI      F +  S    V +   
Sbjct: 237 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI------FSLGASPYPGVKIDE- 289

Query: 630 VYNCFVAGEFNKLVEE----EVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
                   EF + ++E         T   M +T L C   EP+ RP+   ++
Sbjct: 290 --------EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 333

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 59.8 bits (145), Expect = 1e-09
 Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 9/130 (6%)

Query: 487 VYEFMSKGSLADLLFNLETRPLWRD-RVRI-ALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           V E+++ G   DL+F++++   + + R R  A ++  GL +LH +    II+ D+KL N+
Sbjct: 74  VMEYLNGG---DLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNV 127

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+D     KI+DFG+ K  M N  G  +   G+  Y+APE           D +SFGV+L
Sbjct: 128 LLDKDGHIKIADFGMCKENM-NGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLL 186

Query: 605 LEIICCRSNF 614
            E++  +S F
Sbjct: 187 YEMLIGQSPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 59.1 bits (143), Expect = 2e-09
 Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 19/130 (14%)

Query: 489 EFMSKGSLADLLFNLETRPLWRDR---VRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           E+M  GSL D L+               RI   V +GL +L +E    IIH D+K  N+L
Sbjct: 79  EYMDAGSL-DKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVL 135

Query: 546 IDDSWRAKISDFGLAKLLMPN--QTGIVAGVRGSRGYMAPEWQNSG------LITVKSDV 597
           ++ + + K+ DFG++  L+ +  +T I     G + YMAPE   SG        TV+SDV
Sbjct: 136 VNGNGQVKLCDFGVSGNLVASLAKTNI-----GCQSYMAPERIKSGGPNQNPTYTVQSDV 190

Query: 598 YSFGVVLLEI 607
           +S G+ +LE+
Sbjct: 191 WSLGLSILEM 200

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 59.7 bits (144), Expect = 2e-09
 Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 15/159 (9%)

Query: 467 FLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLL 524
           FL+ + S        S+   V E+++ G   DL+F+++  R L  +  R  + +++  L 
Sbjct: 57  FLVGLHSCF---QTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAEISLALN 110

Query: 525 YLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL-LMPNQTGIVAGVRGSRGYMAP 583
           YLH   E  II+ D+KL N+L+D     K++D+G+ K  L P  T   +   G+  Y+AP
Sbjct: 111 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAP 165

Query: 584 EWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTAD 622
           E           D ++ GV++ E++  RS F++ V ++D
Sbjct: 166 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI-VGSSD 203

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 58.7 bits (142), Expect = 2e-09
 Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   +++ EFM  G+L   L   + +      V +   +A G+ YL    E+  +H D+
Sbjct: 76  KSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---SEMNYVHRDL 132

Query: 540 KLRNILIDDSWRAKISDFGLAKLLM-----PNQTGIVAGVRGSRGYMAPEWQNSGLITVK 594
             RNIL++ +   K+SDFGL++ L      P  T  + G    R + APE       T  
Sbjct: 133 AARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIR-WTAPEAIAYRKFTSA 191

Query: 595 SDVYSFGVVLLEII 608
           SDV+S+G+V+ E++
Sbjct: 192 SDVWSYGIVMWEVM 205

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 19/138 (13%)

Query: 486 LVYEFMSKGSLADLL-----------FNLETRPL----WRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L           +N    P     ++D V  A  VARG+ YL  + 
Sbjct: 101 VIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK- 159

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAK-LLMPNQTGIVAGVRGSRGYMAPEWQNSG 589
             + IH D+  RN+L+ +    KI+DFGLA+ +   +        R    +MAPE     
Sbjct: 160 --KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 217

Query: 590 LITVKSDVYSFGVVLLEI 607
           + T +SDV+SFGV+L EI
Sbjct: 218 IYTHQSDVWSFGVLLWEI 235

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 58.7 bits (142), Expect = 2e-09
 Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 7/132 (5%)

Query: 486 LVYEFMSKGSLADLLFNL-ETRPLWRD--RVRIALDVARGLLYLHDECEVQIIHCDIKLR 542
           LV   M+ G L   ++N+ E  P + +         +  GL +LH     +II+ D+K  
Sbjct: 70  LVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPE 126

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           N+L+D+    +ISD GLA  L   Q+    G  G+ G+MAPE           D ++ GV
Sbjct: 127 NVLLDNDGNVRISDLGLAVELKDGQSK-TKGYAGTPGFMAPELLQGEEYDFSVDYFALGV 185

Query: 603 VLLEIICCRSNF 614
            L E+I  R  F
Sbjct: 186 TLYEMIAARGPF 197

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 58.4 bits (141), Expect = 2e-09
 Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 5/126 (3%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +++ E+M  G+L   L + +        V +   +A G+ YL D   +  +H D+  RNI
Sbjct: 82  MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNI 138

Query: 545 LIDDSWRAKISDFGLAKLL--MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           L++ +   K+SDFGL+++L   P  T   +G +    + APE       T  SDV+SFG+
Sbjct: 139 LVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGI 198

Query: 603 VLLEII 608
           V+ E++
Sbjct: 199 VMWEVM 204

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 58.2 bits (141), Expect = 3e-09
 Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 19/157 (12%)

Query: 525 YLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE 584
           Y+H   +  I+H DIK  NI +  +   K+ DFG++K ++ ++  +   V G+  YM+PE
Sbjct: 116 YIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISK-ILGSEYSMAETVVGTPYYMSPE 171

Query: 585 WQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE 644
                    KSD+++ G VL E++  +  F+     A   L         V G +     
Sbjct: 172 LCQGVKYNFKSDIWALGCVLYELLTLKRTFD-----ATNPLNLVVK---IVQGNY----T 219

Query: 645 EEVDKITLE-RMVKTGLLCIQDEPNLRPSMKNVILML 680
             V   + E   +   LL  Q +P  RP+   V+   
Sbjct: 220 PVVSVYSSELISLVHSLL--QQDPEKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 58.1 bits (140), Expect = 3e-09
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 17/128 (13%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E +  G     L   +     +  V+ ALD A G+ YL  +     IH D+  RN L
Sbjct: 69  IVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCL 125

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-------YMAPEWQNSGLITVKSDVY 598
           + ++   KISDFG+++     +     G+  S G       + APE  N G  + +SDV+
Sbjct: 126 VGENNVLKISDFGMSR----QEDD---GIYSSSGLKQIPIKWTAPEALNYGRYSSESDVW 178

Query: 599 SFGVVLLE 606
           S+G++L E
Sbjct: 179 SYGILLWE 186

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 58.9 bits (142), Expect = 3e-09
 Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 14/159 (8%)

Query: 467 FLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLL 524
           FL+ + S       +S+  LV E+++ G   DL+F+++  R L  +  R  A ++   L 
Sbjct: 57  FLVGLHSCF---QTTSRLFLVIEYVNGG---DLMFHMQRQRKLPEEHARFYAAEICIALN 110

Query: 525 YLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL-LMPNQTGIVAGVRGSRGYMAP 583
           +LH   E  II+ D+KL N+L+D     K++D+G+ K  L P  T   +   G+  Y+AP
Sbjct: 111 FLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT--TSTFCGTPNYIAP 165

Query: 584 EWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTAD 622
           E           D ++ GV++ E++  RS F++     D
Sbjct: 166 EILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPD 204

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 58.1 bits (141), Expect = 3e-09
 Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 26/136 (19%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQIIHCDI 539
           LV E    GS+ DL+  L  +     R++      I  +  RGL YLH+    ++IH DI
Sbjct: 86  LVMELCGGGSVTDLVKGLRKKG---KRLKEEWIAYILRETLRGLAYLHEN---KVIHRDI 139

Query: 540 KLRNILIDDSWRAKISDFG----LAKLLMPNQTGIVAGVRGSRGYMAPE-----WQNSGL 590
           K +NIL+  +   K+ DFG    L   L    T I     G+  +MAPE      Q    
Sbjct: 140 KGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFI-----GTPYWMAPEVIACDEQPDAS 194

Query: 591 ITVKSDVYSFGVVLLE 606
              +SDV+S G+  +E
Sbjct: 195 YDARSDVWSLGITAIE 210

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 58.3 bits (141), Expect = 4e-09
 Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 24/157 (15%)

Query: 475 LVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQ 533
           +V  H SS    +Y +++K           +RPL     + I   +  GL YLH +   +
Sbjct: 134 MVLPHYSSD---LYTYLTK----------RSRPLPIDQALIIEKQILEGLRYLHAQ---R 177

Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAK--LLMPNQTGIVAGVRGSRGYMAPEWQNSGLI 591
           IIH D+K  NI I+D  +  I D G A+  ++ P   G+   V  +    APE       
Sbjct: 178 IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETN----APEVLARDKY 233

Query: 592 TVKSDVYSFGVVLLEIICCRSN-FEVNVSTADEVLLS 627
             K+D++S G+VL E++   S  FE   ST +E + S
Sbjct: 234 NSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKS 270

Length = 357

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 58.1 bits (140), Expect = 5e-09
 Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 23/140 (16%)

Query: 486 LVYEFMSKGSL-----------ADLLFNLETRP----LWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ +KG+L            D  F++   P     ++D V  A  VARG+ YL    
Sbjct: 95  VIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR- 153

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQN 587
             + IH D+  RN+L+ +    KI+DFGLA+ +  +           R    +MAPE   
Sbjct: 154 --RCIHRDLAARNVLVTEDNVMKIADFGLARGV--HDIDYYKKTSNGRLPVKWMAPEALF 209

Query: 588 SGLITVKSDVYSFGVVLLEI 607
             + T +SDV+SFG+++ EI
Sbjct: 210 DRVYTHQSDVWSFGILMWEI 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 57.5 bits (139), Expect = 6e-09
 Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 12/126 (9%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V EF+  G+L D++    TR        + L V + L +LH +    +IH DIK  +IL
Sbjct: 93  VVMEFLEGGALTDIV--THTRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSIL 147

Query: 546 IDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +    R K+SDFG    +   +P +  +V    G+  +MAPE  +      + D++S G+
Sbjct: 148 LTSDGRVKLSDFGFCAQVSKEVPRRKSLV----GTPYWMAPEVISRLPYGTEVDIWSLGI 203

Query: 603 VLLEII 608
           +++E++
Sbjct: 204 MVIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 57.3 bits (139), Expect = 7e-09
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 32/149 (21%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRP--LWRDRVR-IALDVARGLLYLHDEC 530
           L    R   +L LV+E++ +     LL  LE  P  L  D VR     + + + Y H   
Sbjct: 65  LKEAFRRKGRLYLVFEYVER----TLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH- 119

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL----MPNQTGIVAGVRGSRGYMAPEWQ 586
              IIH DIK  NIL+ +S   K+ DFG A+ L        T  VA    +R Y APE  
Sbjct: 120 --NIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVA----TRWYRAPE-- 171

Query: 587 NSGLITVKS-------DVYSFGVVLLEII 608
               + V         DV++ G ++ E++
Sbjct: 172 ----LLVGDTNYGKPVDVWAIGCIMAELL 196

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 57.7 bits (139), Expect = 7e-09
 Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 19/138 (13%)

Query: 486 LVYEFMSKGSLADLL---------FNLETRPL------WRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L         ++ +T  L      ++D V  A  VARG+ YL  + 
Sbjct: 95  VLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ- 153

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPEWQNSG 589
             + IH D+  RN+L+ +    KI+DFGLA+ +   +        R    +MAPE     
Sbjct: 154 --KCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDR 211

Query: 590 LITVKSDVYSFGVVLLEI 607
           + T +SDV+SFGV+L EI
Sbjct: 212 VYTHQSDVWSFGVLLWEI 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 57.4 bits (138), Expect = 8e-09
 Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 12/126 (9%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V EF+  G+L D++    TR        + L V R L YLH++    +IH DIK  +IL
Sbjct: 96  VVMEFLEGGALTDIV--THTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSIL 150

Query: 546 IDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +    R K+SDFG    +   +P +  +V    G+  +MAPE  +      + D++S G+
Sbjct: 151 LTSDGRIKLSDFGFCAQVSKEVPKRKSLV----GTPYWMAPEVISRLPYGTEVDIWSLGI 206

Query: 603 VLLEII 608
           +++E+I
Sbjct: 207 MVIEMI 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 56.8 bits (137), Expect = 8e-09
 Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 13/126 (10%)

Query: 489 EFMSKGSLADLL--FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI 546
           EF+  GS++ +L  F     P++    +  LD   G+ YLH+ C   ++H DIK  N+++
Sbjct: 82  EFVPGGSISSILNRFGPLPEPVFCKYTKQILD---GVAYLHNNC---VVHRDIKGNNVML 135

Query: 547 DDSWRAKISDFGLAKLLM-----PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFG 601
             +   K+ DFG A+ L         + ++  + G+  +MAPE  N      KSD++S G
Sbjct: 136 MPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIG 195

Query: 602 VVLLEI 607
             + E+
Sbjct: 196 CTVFEM 201

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 57.3 bits (138), Expect = 9e-09
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 23/140 (16%)

Query: 486 LVYEFMSKGSLADLL-----------FNLETRP----LWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L           +++   P     ++D V     VARG+ YL  + 
Sbjct: 98  VIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ- 156

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQN 587
             + IH D+  RN+L+ ++   KI+DFGLA+ +  N           R    +MAPE   
Sbjct: 157 --KCIHRDLAARNVLVTENNVMKIADFGLARDV--NNIDYYKKTTNGRLPVKWMAPEALF 212

Query: 588 SGLITVKSDVYSFGVVLLEI 607
             + T +SDV+SFGV++ EI
Sbjct: 213 DRVYTHQSDVWSFGVLMWEI 232

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 57.0 bits (138), Expect = 9e-09
 Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 18/145 (12%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLET--RPLWRDRVR-IALDVARGLLYLH 527
           I  LL          LV+EFM      DL   ++   R L    ++     + +GL + H
Sbjct: 60  IIKLLDVFRHKGDLYLVFEFM----DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH 115

Query: 528 DECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ---TGIVAGVRGSRGYMAPE 584
                 I+H D+K  N+LI+     K++DFGLA+         T  V     +R Y APE
Sbjct: 116 SH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVV----TRWYRAPE 168

Query: 585 -WQNSGLITVKSDVYSFGVVLLEII 608
                   +   D++S G +  E++
Sbjct: 169 LLLGDKGYSTPVDIWSVGCIFAELL 193

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 56.9 bits (137), Expect = 9e-09
 Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 4/91 (4%)

Query: 519 VARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIV-AGVRGS 577
           +A+G+ YL +     ++H ++  RNIL+      +I+DFG+A LL P+      +  +  
Sbjct: 118 IAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTP 174

Query: 578 RGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
             +MA E    G  T +SDV+S+GV + E++
Sbjct: 175 IKWMALESILFGRYTHQSDVWSYGVTVWEMM 205

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 56.7 bits (137), Expect = 9e-09
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 20/135 (14%)

Query: 484 KLLVY-EFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKL 541
           KL +  EF   G+L  ++  LE R L   ++R +   +   L +LH     ++IH D+K 
Sbjct: 76  KLWILIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKA 131

Query: 542 RNILIDDSWRAKISDFGL-AKLLMPNQ---TGIVAGVRGSRGYMAPEWQN-----SGLIT 592
            NIL+      K++DFG+ AK     Q   T I     G+  +MAPE             
Sbjct: 132 GNILLTLDGDVKLADFGVSAKNKSTLQKRDTFI-----GTPYWMAPEVVACETFKDNPYD 186

Query: 593 VKSDVYSFGVVLLEI 607
            K+D++S G+ L+E+
Sbjct: 187 YKADIWSLGITLIEL 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 56.9 bits (137), Expect = 1e-08
 Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 9/127 (7%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ EF+  GSL + L   + +   + +++ A+ + +G+ YL      Q +H D+  RN+L
Sbjct: 85  LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVL 141

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG----YMAPEWQNSGLITVKSDVYSFG 601
           ++   + KI DFGL K +  ++      V+        + APE        + SDV+SFG
Sbjct: 142 VESEHQVKIGDFGLTKAIETDKEYYT--VKDDLDSPVFWYAPECLIQSKFYIASDVWSFG 199

Query: 602 VVLLEII 608
           V L E++
Sbjct: 200 VTLYELL 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 56.6 bits (137), Expect = 1e-08
 Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 19/116 (16%)

Query: 514 RIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG 573
           ++ + + + L YL ++    +IH D+K  NIL+D S   K+ DFG++  L+ ++    A 
Sbjct: 118 KMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK----AK 171

Query: 574 VR--GSRGYMAPEW----QNSGLITVKSDVYSFGVVLLEIIC-------CRSNFEV 616
            R  G   YMAPE       +    +++DV+S G+ L+E+         C++ FEV
Sbjct: 172 TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEV 227

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 57.0 bits (138), Expect = 1e-08
 Identities = 51/192 (26%), Positives = 78/192 (40%), Gaps = 45/192 (23%)

Query: 440 IGNDKVN----DKRKLLTV----------LAGCLGSITFLCFLIAISSLLVYKHRSSKKL 485
           I  D+V     +KR   T           L  C  +   +CF                  
Sbjct: 38  IARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF------------------ 79

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRI-ALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            V E+ + G   DL+ ++ T      R    A  V  GL YLH+    +I++ D+KL N+
Sbjct: 80  -VMEYAAGG---DLMMHIHTDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNL 132

Query: 545 LIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           L+D     KI+DFGL K  M   ++T       G+  ++APE       T   D +  GV
Sbjct: 133 LLDTEGFVKIADFGLCKEGMGFGDRTSTFC---GTPEFLAPEVLTETSYTRAVDWWGLGV 189

Query: 603 VLLEIICCRSNF 614
           ++ E++   S F
Sbjct: 190 LIYEMLVGESPF 201

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 56.4 bits (136), Expect = 1e-08
 Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 14/103 (13%)

Query: 511 DRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP----- 565
           +++ IA  VA G+ YL +    + +H D+  RN L+ ++   KI+DFGL++ +       
Sbjct: 131 EQLCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 187

Query: 566 -NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
            ++   +  +R    +M PE       T +SDV+++GVVL EI
Sbjct: 188 ASENDAIP-IR----WMPPESIFYNRYTTESDVWAYGVVLWEI 225

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 56.0 bits (135), Expect = 2e-08
 Identities = 47/143 (32%), Positives = 68/143 (47%), Gaps = 32/143 (22%)

Query: 490 FMSK---GSLADLLFNLETR--PLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKL 541
           FM +   GSL+ LL    ++  PL  +   I      +  GL YLHD    QI+H DIK 
Sbjct: 83  FMEQVPGGSLSALL---RSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKG 136

Query: 542 RNILIDD-SWRAKISDFGLAKLLMPNQTGIVAGV-------RGSRGYMAPEWQNSGL--I 591
            N+L++  S   KISDFG +K L        AG+        G+  YMAPE  + G    
Sbjct: 137 DNVLVNTYSGVVKISDFGTSKRL--------AGINPCTETFTGTLQYMAPEVIDKGPRGY 188

Query: 592 TVKSDVYSFGVVLLEIICCRSNF 614
              +D++S G  ++E+   +  F
Sbjct: 189 GAPADIWSLGCTIVEMATGKPPF 211

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 56.2 bits (135), Expect = 2e-08
 Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 19/148 (12%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGLLYLHDECE 531
           L Y  ++  +L  V E+ + G   +L F+L   R    DR R    ++   L YLH E  
Sbjct: 60  LKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 116

Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQ 586
           V  ++ D+KL N+++D     KI+DFGL K       GI  G       G+  Y+APE  
Sbjct: 117 V--VYRDLKLENLMLDKDGHIKITDFGLCK------EGIKDGATMKTFCGTPEYLAPEVL 168

Query: 587 NSGLITVKSDVYSFGVVLLEIICCRSNF 614
                    D +  GVV+ E++C R  F
Sbjct: 169 EDNDYGRAVDWWGLGVVMYEMMCGRLPF 196

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 56.2 bits (136), Expect = 2e-08
 Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 16/129 (12%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV E+  +  LA LL N+   P    +V+ + L + RGL YLH+     IIH D+K+ N+
Sbjct: 85  LVMEYCEQ-DLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNL 139

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR----GYMAPEWQ-NSGLITVKSDVYS 599
           L+ D    KI+DFGLA+       G+ A     +     Y APE        T   D+++
Sbjct: 140 LLTDKGCLKIADFGLART-----YGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWA 194

Query: 600 FGVVLLEII 608
            G +L E++
Sbjct: 195 VGCILAELL 203

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 56.2 bits (135), Expect = 2e-08
 Identities = 37/125 (29%), Positives = 70/125 (56%), Gaps = 10/125 (8%)

Query: 514 RIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG 573
           ++++ V +GL YL ++   +I+H D+K  NIL++     K+ DFG++  L+ +   +   
Sbjct: 107 KVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS 161

Query: 574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNC 633
             G+R YM+PE       +V+SD++S G+ L+E+   R  + +    A E+ L   ++ C
Sbjct: 162 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGR--YPIPPPDAKELEL---MFGC 216

Query: 634 FVAGE 638
            V G+
Sbjct: 217 PVEGD 221

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 57.5 bits (139), Expect = 2e-08
 Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 13/129 (10%)

Query: 487 VYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI 546
           V+E++   +L ++L      P   +  R+ L V   L   H++    I+H D+K +NI++
Sbjct: 57  VFEYVPGRTLREVLAADGALPA-GETGRLMLQVLDALACAHNQ---GIVHRDLKPQNIMV 112

Query: 547 ---DDSWRAKISDFGLAKLL-----MPNQTGIVAG-VRGSRGYMAPEWQNSGLITVKSDV 597
                   AK+ DFG+  LL         T      V G+  Y APE      +T  SD+
Sbjct: 113 SQTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDL 172

Query: 598 YSFGVVLLE 606
           Y++G++ LE
Sbjct: 173 YAWGLIFLE 181

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 56.2 bits (135), Expect = 2e-08
 Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 20/148 (13%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGLLYLHDECE 531
           L Y  ++  +L  V E+ + G   +L F+L   R    +R R    ++   L YLH    
Sbjct: 60  LKYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSALEYLHSR-- 114

Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQ 586
             +++ DIKL N+++D     KI+DFGL K       GI  G       G+  Y+APE  
Sbjct: 115 -DVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKTFCGTPEYLAPEVL 167

Query: 587 NSGLITVKSDVYSFGVVLLEIICCRSNF 614
                    D +  GVV+ E++C R  F
Sbjct: 168 EDNDYGRAVDWWGLGVVMYEMMCGRLPF 195

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 55.5 bits (133), Expect = 2e-08
 Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 13/137 (9%)

Query: 478 KHRSSKKLLVY-EFMSKGSLADLL--FNLETRPLWRDRVRIALDVARGLLYLHDECEVQI 534
           + R+ K L ++ E+M  GS+ D L  +   T  + R   R  L+   G+ YLH      I
Sbjct: 74  RDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILE---GMSYLHSN---MI 127

Query: 535 IHCDIKLRNILIDDSWRAKISDFGLAKLLMP---NQTGIVAGVRGSRGYMAPEWQNSGLI 591
           +H DIK  NIL D +   K+ DFG +K L     + TGI + V G+  +M+PE  +    
Sbjct: 128 VHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRS-VTGTPYWMSPEVISGEGY 186

Query: 592 TVKSDVYSFGVVLLEII 608
             K+DV+S G  ++E++
Sbjct: 187 GRKADVWSLGCTVVEML 203

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 56.3 bits (136), Expect = 2e-08
 Identities = 42/140 (30%), Positives = 75/140 (53%), Gaps = 27/140 (19%)

Query: 487 VYEFMSKGSLADLLFNLETRPLWRDRVRI--ALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           V E+++ G   DL+++++    +++   +  A ++A GL +LH +    II+ D+KL N+
Sbjct: 79  VMEYVNGG---DLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNV 132

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPE---WQNSGLITVKS- 595
           ++D     KI+DFG+ K        I  G       G+  Y+APE   +Q  G    KS 
Sbjct: 133 MLDAEGHIKIADFGMCK------ENIFGGKTTRTFCGTPDYIAPEIIAYQPYG----KSV 182

Query: 596 DVYSFGVVLLEIICCRSNFE 615
           D ++FGV+L E++  +  F+
Sbjct: 183 DWWAFGVLLYEMLAGQPPFD 202

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 55.4 bits (133), Expect = 2e-08
 Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 5/90 (5%)

Query: 519 VARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS- 577
           V+ G+ YL    E   +H D+  RN+L+     AKISDFGL+K L  ++    A   G  
Sbjct: 104 VSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKW 160

Query: 578 -RGYMAPEWQNSGLITVKSDVYSFGVVLLE 606
              + APE  N    + KSDV+SFGV++ E
Sbjct: 161 PVKWYAPECMNYYKFSSKSDVWSFGVLMWE 190

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 55.8 bits (134), Expect = 2e-08
 Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 4/124 (3%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ + M  G L D +   +     +  +   + +A+G+ YL +    +++H D+  RN+L
Sbjct: 85  LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVL 141

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVA-GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           +      KI+DFGLAKLL  ++    A G +    +MA E     + T +SDV+S+GV +
Sbjct: 142 VKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 201

Query: 605 LEII 608
            E++
Sbjct: 202 WELM 205

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 55.4 bits (133), Expect = 3e-08
 Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 13/134 (9%)

Query: 481 SSKKLLVY-EFMSKGSLADLL--FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHC 537
             KKL ++ E+M  GS+ D L  +   T  + R   R    + +G+ YLH      I+H 
Sbjct: 77  EEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTR---QILQGVSYLHSN---MIVHR 130

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMP---NQTGIVAGVRGSRGYMAPEWQNSGLITVK 594
           DIK  NIL D +   K+ DFG +K +     + TGI   V G+  +M+PE  +      K
Sbjct: 131 DIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGI-KSVTGTPYWMSPEVISGEGYGRK 189

Query: 595 SDVYSFGVVLLEII 608
           +DV+S    ++E++
Sbjct: 190 ADVWSVACTVVEML 203

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 56.0 bits (135), Expect = 3e-08
 Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 14/153 (9%)

Query: 467 FLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLL 524
           FL+ + S        S+   V EF+S G   DL+F+++  R L  +  R  + +++  L 
Sbjct: 57  FLVGLHSCF---QTESRLFFVIEFVSGG---DLMFHMQRQRKLPEEHARFYSAEISLALN 110

Query: 525 YLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL-LMPNQTGIVAGVRGSRGYMAP 583
           +LH   E  II+ D+KL N+L+D     K++D+G+ K  + P  T   +   G+  Y+AP
Sbjct: 111 FLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDT--TSTFCGTPNYIAP 165

Query: 584 EWQNSGLITVKSDVYSFGVVLLEIICCRSNFEV 616
           E           D ++ GV++ E++  RS F++
Sbjct: 166 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 55.8 bits (135), Expect = 3e-08
 Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 11/133 (8%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E M      DL   ++T+ L  D ++  L  + RGL Y+H      ++H D+K  N+
Sbjct: 85  IVQELME----TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNL 137

Query: 545 LIDDSWRAKISDFGLAKLLMPN--QTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFG 601
           L++ +   KI DFGLA++  P    TG +     +R Y APE   NS   T   D++S G
Sbjct: 138 LLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVG 197

Query: 602 VVLLEIICCRSNF 614
            +L E++  R  F
Sbjct: 198 CILAEMLSNRPLF 210

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 56.4 bits (136), Expect = 3e-08
 Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 24/173 (13%)

Query: 523 LLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-GSRGYM 581
           LL +H      +IH DIK  NIL+  +   K+ DFG +K+     +  V     G+  Y+
Sbjct: 153 LLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYV 212

Query: 582 APEWQNSGLITVKSDVYSFGVVLLEIICCRSNFE-VNVSTADEVLLSTWVYNCFVAGEFN 640
           APE       + K+D++S GV+L E++  +  F+  N+   +EV+  T      +AG ++
Sbjct: 213 APEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM---EEVMHKT------LAGRYD 263

Query: 641 KLVEEEVDKITLE-RMVKTGLLCIQDEPNLRPSMKNVI------LMLEGTMEI 686
            L       I+ E + + T LL    +P  RPS   ++      L + G +EI
Sbjct: 264 PL----PPSISPEMQEIVTALLS--SDPKRRPSSSKLLNMPICKLFISGLLEI 310

Length = 496

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 56.2 bits (135), Expect = 3e-08
 Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 15/167 (8%)

Query: 511 DRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI 570
           D +     VARG+ +L  +     +H D+  RN+L+      KI DFGLA+ +M +   +
Sbjct: 238 DLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYV 294

Query: 571 VAGVRG-SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW 629
             G       +MAPE     L T  SDV+S+G++L EI      F +  +    +++ + 
Sbjct: 295 SKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEI------FSLGGTPYPGMIVDST 348

Query: 630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNV 676
            YN   +G +     +   +   + MVK    C   EP  RPS  ++
Sbjct: 349 FYNKIKSG-YRMAKPDHATQEVYDIMVK----CWNSEPEKRPSFLHL 390

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 54.9 bits (133), Expect = 3e-08
 Identities = 44/147 (29%), Positives = 63/147 (42%), Gaps = 34/147 (23%)

Query: 479 HRSSK-KLLVY---EFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLYL 526
           +R+ K K  +Y   E+   G L  +L         RDR       AR           YL
Sbjct: 59  YRTFKDKKYIYMLMEYCLGGELWTIL---------RDRGLFDEYTARFYIACVVLAFEYL 109

Query: 527 HDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ---TGIVAGVRGSRGYMAP 583
           H+     II+ D+K  N+L+D +   K+ DFG AK L   Q   T       G+  Y+AP
Sbjct: 110 HNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFC-----GTPEYVAP 161

Query: 584 E-WQNSGLITVKSDVYSFGVVLLEIIC 609
           E   N G      D +S G++L E++ 
Sbjct: 162 EIILNKGY-DFSVDYWSLGILLYELLT 187

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 55.8 bits (134), Expect = 3e-08
 Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 10/118 (8%)

Query: 494 GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAK 553
            +  D L N      + D V  +  VA G+ +L  +     +H D+  RN+LI +    K
Sbjct: 223 RTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLICEGKLVK 279

Query: 554 ISDFGLAKLLMPNQTGIVAGVRGSR----GYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
           I DFGLA+ +M +   I    +GS      +MAPE   + L T  SDV+SFG++L EI
Sbjct: 280 ICDFGLARDIMRDSNYI---SKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEI 334

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 55.0 bits (132), Expect = 4e-08
 Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 45/219 (20%)

Query: 485 LLVYEFMSKGSL--------ADLLFNLETRPLWRD-------RVRIALDVARGLLYLHDE 529
           ++V+E+M  G L         D +  ++ +P            + IA  +A G++YL  +
Sbjct: 83  IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ 142

Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPE 584
                +H D+  RN L+  +   KI DFG+++ +       V G     +R    +M PE
Sbjct: 143 ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR----WMPPE 195

Query: 585 WQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAG---EFNK 641
                  T +SDV+SFGV+L EI          +S       +T V  C   G   E  +
Sbjct: 196 SIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS-------NTEVIECITQGRVLERPR 248

Query: 642 LVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML 680
           +  +EV  I L         C Q EP  R ++K +  +L
Sbjct: 249 VCPKEVYDIMLG--------CWQREPQQRLNIKEIYKIL 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 55.5 bits (134), Expect = 4e-08
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 5/113 (4%)

Query: 507 PLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP 565
           PL  D V++ L  + RGL YLH      I+H DIK  N+L++ +   KI DFGLA++  P
Sbjct: 99  PLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155

Query: 566 NQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGVVLLEIICCRSNFEVN 617
           +++  +     ++ Y APE    S   T   D++S G +  E++  R  F+  
Sbjct: 156 DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQ 208

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 55.1 bits (132), Expect = 4e-08
 Identities = 54/217 (24%), Positives = 89/217 (41%), Gaps = 42/217 (19%)

Query: 485 LLVYEFMSKGSLADLLF------------NLETRPLWRDRVRIALDVARGLLYLHDECEV 532
           ++V+E+M  G L   L             N          + IA  +A G++YL  +   
Sbjct: 83  IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ--- 139

Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEWQN 587
             +H D+  RN L+ ++   KI DFG+++ +       V G     +R    +M PE   
Sbjct: 140 HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR----WMPPESIM 195

Query: 588 SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAG---EFNKLVE 644
               T +SDV+S GVVL EI          +S  +       V  C   G   +  +   
Sbjct: 196 YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-------VIECITQGRVLQRPRTCP 248

Query: 645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
           +EV  + L         C Q EP++R ++K +  +L+
Sbjct: 249 KEVYDLMLG--------CWQREPHMRLNIKEIHSLLQ 277

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 55.2 bits (134), Expect = 4e-08
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 22/99 (22%)

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ------TGIVAGV 574
           RGL YLH      +IH D+K  NIL++ +   KI DFGLA+ + P++      T  V   
Sbjct: 114 RGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVV-- 168

Query: 575 RGSRGYMAPE----WQN-SGLITVKSDVYSFGVVLLEII 608
             +R Y APE        +  I    D++S G +  E++
Sbjct: 169 --TRWYRAPELLLSSSRYTKAI----DIWSVGCIFAELL 201

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 54.3 bits (130), Expect = 5e-08
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 10/128 (7%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV EF   GS+ DL+ N +   L  + +  I  ++ RGL +LH     ++IH DIK +N+
Sbjct: 86  LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNV 142

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-----WQNSGLITVKSDVYS 599
           L+ ++   K+ DFG++  L     G      G+  +MAPE              KSD++S
Sbjct: 143 LLTENAEVKLVDFGVSAQL-DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWS 201

Query: 600 FGVVLLEI 607
            G+  +E+
Sbjct: 202 LGITAIEM 209

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 54.9 bits (133), Expect = 6e-08
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 28/109 (25%)

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL--------MPNQTGIVA 572
           + L Y+H      +IH D+K  NIL++   R K++DFGLA+ L         P  T  VA
Sbjct: 118 KALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVA 174

Query: 573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGV-------VLLEIICCRSNF 614
               +R Y APE      I + S  Y+ GV       +L E++  +  F
Sbjct: 175 ----TRWYRAPE------ILLGSTRYTKGVDMWSVGCILGEMLLGKPLF 213

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 54.9 bits (132), Expect = 7e-08
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 511 DRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI 570
           D +  +  VA+G+ +L  +     IH D+  RNIL+      KI DFGLA+ +  +   +
Sbjct: 215 DLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYV 271

Query: 571 VAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
           V G  R    +MAPE   + + T +SDV+S+G++L EI
Sbjct: 272 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEI 309

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 53.8 bits (129), Expect = 7e-08
 Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRG 576
           + +A  L YLH++    I+H D+K +N+ +  +   K+ D G+A++L  NQ  + + + G
Sbjct: 109 VQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVL-ENQCDMASTLIG 164

Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  YM+PE  ++     KSDV++ G  + E+   +  F
Sbjct: 165 TPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAF 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 54.1 bits (130), Expect = 7e-08
 Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 15/130 (11%)

Query: 485 LLVYEFMSKGSLADLL----FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIK 540
            L+ E++  GSL D L     NL    L+      A  +  G+ YLH +     IH D+ 
Sbjct: 84  QLIMEYVPLGSLRDYLPKHKLNLAQLLLF------AQQICEGMAYLHSQ---HYIHRDLA 134

Query: 541 LRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVY 598
            RN+L+D+    KI DFGLAK +            G     + A E       +  SDV+
Sbjct: 135 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVW 194

Query: 599 SFGVVLLEII 608
           SFGV L E++
Sbjct: 195 SFGVTLYELL 204

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 54.2 bits (130), Expect = 7e-08
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 12/102 (11%)

Query: 511 DRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN---- 566
           D + IA+ +A G+ YL        +H D+  RNILI +    KISD GL++ +       
Sbjct: 125 DFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYR 181

Query: 567 -QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
            Q   +  +R    +M PE    G  +  SD++SFGVVL EI
Sbjct: 182 VQPKSLLPIR----WMPPEAIMYGKFSSDSDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 54.6 bits (131), Expect = 8e-08
 Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 15/135 (11%)

Query: 485 LLVYEFMSKGSLADLLFNLETR---PLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKL 541
             V EF++ G   DL+F+++ +    L+R     A ++  GL +LH +    II+ D+KL
Sbjct: 72  FFVMEFLNGG---DLMFHIQDKGRFDLYRATF-YAAEIVCGLQFLHSK---GIIYRDLKL 124

Query: 542 RNILIDDSWRAKISDFGLAK--LLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
            N+++D     KI+DFG+ K  +   N+        G+  Y+APE       T   D +S
Sbjct: 125 DNVMLDRDGHIKIADFGMCKENVFGDNRASTFC---GTPDYIAPEILQGLKYTFSVDWWS 181

Query: 600 FGVVLLEIICCRSNF 614
           FGV+L E++  +S F
Sbjct: 182 FGVLLYEMLIGQSPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 53.8 bits (129), Expect = 8e-08
 Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 5/124 (4%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +LV E  S G L   L   +      + V +   V+ G+ YL        +H D+  RN+
Sbjct: 70  MLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNV 126

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS--RGYMAPEWQNSGLITVKSDVYSFGV 602
           L+ +   AKISDFGL+K L  + +   A   G     + APE  N    + +SDV+S+G+
Sbjct: 127 LLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGI 186

Query: 603 VLLE 606
            + E
Sbjct: 187 TMWE 190

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 54.3 bits (130), Expect = 8e-08
 Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 4/93 (4%)

Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G++YL    E +++H D+  RN+L+      KI+DFGLA+LL  ++    A G +
Sbjct: 116 VQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGK 172

Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E  +    T +SDV+S+GV + E++
Sbjct: 173 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 205

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 53.5 bits (129), Expect = 9e-08
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 21/138 (15%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQII 535
            R  K  +V E+   GSL D+ + +   PL   +  IA    +  +GL YLH   E   I
Sbjct: 70  LRRDKLWIVMEYCGGGSLQDI-YQVTRGPLSELQ--IAYVCRETLKGLAYLH---ETGKI 123

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPN----QTGIVAGVRGSRGYMAPEW---QNS 588
           H DIK  NIL+ +    K++DFG++  L       ++ I     G+  +MAPE    +  
Sbjct: 124 HRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFI-----GTPYWMAPEVAAVERK 178

Query: 589 GLITVKSDVYSFGVVLLE 606
           G    K D+++ G+  +E
Sbjct: 179 GGYDGKCDIWALGITAIE 196

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 53.9 bits (129), Expect = 9e-08
 Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 12/126 (9%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           ++ EF+  G+L D++   +TR        +   V + L YLH +    +IH DIK  +IL
Sbjct: 95  VLMEFLQGGALTDIVS--QTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSIL 149

Query: 546 IDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +    R K+SDFG    +   +P +  +V    G+  +MAPE  +      + D++S G+
Sbjct: 150 LTLDGRVKLSDFGFCAQISKDVPKRKSLV----GTPYWMAPEVISRTPYGTEVDIWSLGI 205

Query: 603 VLLEII 608
           +++E++
Sbjct: 206 MVIEMV 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 53.9 bits (129), Expect = 1e-07
 Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 14/126 (11%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV E+   GS +DLL  +  +PL    +  I     +GL YLH      +IH DIK  NI
Sbjct: 98  LVMEY-CLGSASDLL-EVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNI 152

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           L+ +  + K++DFG A    P  + +     G+  +MAPE     + G    K DV+S G
Sbjct: 153 LLTEPGQVKLADFGSASKSSPANSFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLG 207

Query: 602 VVLLEI 607
           +  +E+
Sbjct: 208 ITCIEL 213

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 54.3 bits (130), Expect = 1e-07
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)

Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 106 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 162

Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 163 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMH---YNQTVDIWSVGCIMAELLTGR 215

Query: 612 SNF 614
           + F
Sbjct: 216 TLF 218

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 53.8 bits (129), Expect = 1e-07
 Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 26/142 (18%)

Query: 485 LLVYEFMSKGSL----------ADLLFNLETRPLWR----DRVRIALDVARGLLYLHDEC 530
           L+V+E+M  G L          A +L   E     +      + IA  +A G++YL    
Sbjct: 83  LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYL---A 139

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEW 585
            +  +H D+  RN L+      KI DFG+++ +       V G     +R    +M PE 
Sbjct: 140 SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR----WMPPES 195

Query: 586 QNSGLITVKSDVYSFGVVLLEI 607
                 T +SD++SFGVVL EI
Sbjct: 196 ILYRKFTTESDIWSFGVVLWEI 217

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 53.9 bits (129), Expect = 1e-07
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 10/128 (7%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV EF   GS+ DL+ N +   L  D +  I  ++ RGL +LH     ++IH DIK +N+
Sbjct: 96  LVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNV 152

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-----WQNSGLITVKSDVYS 599
           L+ ++   K+ DFG++  L     G      G+  +MAPE              +SD++S
Sbjct: 153 LLTENAEVKLVDFGVSAQL-DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWS 211

Query: 600 FGVVLLEI 607
            G+  +E+
Sbjct: 212 LGITAIEM 219

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 53.9 bits (129), Expect = 1e-07
 Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 10/143 (6%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGLLYLHDECE 531
           L Y  ++  +L  V E+++ G   +L F+L   R    DR R    ++   L YLH    
Sbjct: 60  LKYSFQTKDRLCFVMEYVNGG---ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSG-- 114

Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLI 591
            +I++ D+KL N+++D     KI+DFGL K  + +    +    G+  Y+APE       
Sbjct: 115 -KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATMKTFCGTPEYLAPEVLEDNDY 172

Query: 592 TVKSDVYSFGVVLLEIICCRSNF 614
               D +  GVV+ E++C R  F
Sbjct: 173 GRAVDWWGLGVVMYEMMCGRLPF 195

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 53.6 bits (129), Expect = 1e-07
 Identities = 45/112 (40%), Positives = 56/112 (50%), Gaps = 18/112 (16%)

Query: 480 RSSKKL-LVYEFMSKGSLADLLFNLETRP--LWRDRVRIAL-DVARGLLYLHDECEVQII 535
           R  K+L LV+EF+    L DL    E  P  L   RVR  L  + RG+ + H      II
Sbjct: 70  RRKKRLYLVFEFVDHTVLDDL----EKYPNGLDESRVRKYLFQILRGIEFCHSH---NII 122

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAKLLM-PNQ--TGIVAGVRGSRGYMAPE 584
           H DIK  NIL+  S   K+ DFG A+ L  P +  T  VA    +R Y APE
Sbjct: 123 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVA----TRWYRAPE 170

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 53.3 bits (128), Expect = 1e-07
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 22/140 (15%)

Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALD-VARGLLYLHDECEVQIIHCDIKLRNILID 547
           E++  GS+   L            VR   + V  GL YLH +    I+H D+K  N+L+D
Sbjct: 88  EYVPGGSIGSCLRTYG--RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVD 142

Query: 548 DSWRAKISDFGLAKLLMPNQTGIVAG------VRGSRGYMAPEW-QNSGL-ITVKSDVYS 599
                KISDFG++K     ++  +        ++GS  +MAPE   +     + K D++S
Sbjct: 143 ADGICKISDFGISK-----KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWS 197

Query: 600 FGVVLLEIICCR---SNFEV 616
            G V+LE+   R   S+ E 
Sbjct: 198 LGCVVLEMFAGRRPWSDEEA 217

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 53.2 bits (128), Expect = 1e-07
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 5/87 (5%)

Query: 523 LLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMA 582
           L Y+H   +V +IH DIK  NIL+ ++   K+ DFG+A LL  N +     V G+  +MA
Sbjct: 114 LKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFV-GTPYWMA 169

Query: 583 PEWQNSG-LITVKSDVYSFGVVLLEII 608
           PE    G     K+D++S G+ + E+ 
Sbjct: 170 PEVITEGKYYDTKADIWSLGITIYEMA 196

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 53.7 bits (129), Expect = 1e-07
 Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 24/156 (15%)

Query: 467 FLIAISSLLVYKHRSSKKL-LVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGL 523
           FL A    L Y  ++  +L  V E+ + G   +L F+L   R    DR R    ++   L
Sbjct: 56  FLTA----LKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSAL 108

Query: 524 LYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSR 578
            YLH  C+  +++ D+KL N+++D     KI+DFGL K       GI  G       G+ 
Sbjct: 109 GYLH-SCD--VVYRDLKLENLMLDKDGHIKITDFGLCK------EGISDGATMKTFCGTP 159

Query: 579 GYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
            Y+APE           D +  GVV+ E++C R  F
Sbjct: 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 195

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 52.9 bits (127), Expect = 1e-07
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 8/106 (7%)

Query: 502 NLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK 561
                 +W   V++ L     L YLH E   +I+H D+   NI++ +  +  I+DFGLAK
Sbjct: 109 RFTEERIWNIFVQMVL----ALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFGLAK 162

Query: 562 LLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
              P     +  V G+  Y  PE   +     K+DV++FG +L ++
Sbjct: 163 QKQPESK--LTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQM 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 52.9 bits (127), Expect = 1e-07
 Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 19/139 (13%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALD-------VARGLLYLHDECEVQIIHC 537
           ++V E+   G+LA+ +         + R    LD         + LL LH      I+H 
Sbjct: 75  MIVMEYAPGGTLAEYI---------QKRCNSLLDEDTILHFFVQILLALHHVHTKLILHR 125

Query: 538 DIKLRNILIDDSWRA-KISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSD 596
           D+K +NIL+D      KI DFG++K+L          V G+  Y++PE         KSD
Sbjct: 126 DLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT--VVGTPCYISPELCEGKPYNQKSD 183

Query: 597 VYSFGVVLLEIICCRSNFE 615
           +++ G VL E+   +  FE
Sbjct: 184 IWALGCVLYELASLKRAFE 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 53.0 bits (127), Expect = 2e-07
 Identities = 56/212 (26%), Positives = 85/212 (40%), Gaps = 31/212 (14%)

Query: 485 LLVYEFMSKGSLADLLFN----LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIK 540
           LLV EF   G L + L +    +          R+A +VA GLL+LH   +   IH D+ 
Sbjct: 71  LLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLA 127

Query: 541 LRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEWQNS------- 588
           LRN  +      KI D+GLA    P    I        +R    ++APE           
Sbjct: 128 LRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLR----WLAPELVEIRGQDLLP 183

Query: 589 GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD 648
              T KS+++S GV + E+         ++S          V    V  +  KL + ++D
Sbjct: 184 KDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-------VLKQVVREQDIKLPKPQLD 236

Query: 649 KITLERMVKTGLLCIQDEPNLRPSMKNVILML 680
               +R  +    C  D P  RP+ + V  +L
Sbjct: 237 LKYSDRWYEVMQFCWLD-PETRPTAEEVHELL 267

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 52.7 bits (126), Expect = 2e-07
 Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 9/106 (8%)

Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWR-AKISDFGLAKLLMPNQTGIV 571
           V+I+L    GL ++HD    +I+H DIK +NI +  +   AK+ DFG+A+ L  +   + 
Sbjct: 108 VQISL----GLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQL-NDSMELA 159

Query: 572 AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVN 617
               G+  Y++PE   +     K+D++S G VL E+   +  FE N
Sbjct: 160 YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN 205

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 53.0 bits (127), Expect = 2e-07
 Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 12/126 (9%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLR 542
           +V E+++ GSL D++   ET     D  +IA    +  + L +LH     Q+IH DIK  
Sbjct: 93  VVMEYLAGGSLTDVV--TETC---MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSD 144

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           NIL+      K++DFG    + P Q+     V G+  +MAPE         K D++S G+
Sbjct: 145 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGI 203

Query: 603 VLLEII 608
           + +E++
Sbjct: 204 MAIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 52.9 bits (128), Expect = 2e-07
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 25/144 (17%)

Query: 479 HRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIH 536
            R + +L  V+E+M +G+L  L+ + + +P     +R I   + +GL ++H        H
Sbjct: 67  FRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK---HGFFH 122

Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLL--MPNQTGIVAGVRGSRGYMAPEWQNSGLITVK 594
            D+K  N+L+      KI+DFGLA+ +   P  T  V     +R Y APE      I ++
Sbjct: 123 RDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYV----STRWYRAPE------ILLR 172

Query: 595 SDVYS-------FGVVLLEIICCR 611
           S  YS        G ++ E+   R
Sbjct: 173 STSYSSPVDIWALGCIMAELYTLR 196

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 53.2 bits (127), Expect = 2e-07
 Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 14/132 (10%)

Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCD 538
           R     LV E+   GS +DLL  +  +PL    +  I     +GL YLH      +IH D
Sbjct: 96  REHTAWLVMEY-CLGSASDLL-EVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRD 150

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE---WQNSGLITVKS 595
           IK  NIL+ +  + K++DFG A +  P  + +     G+  +MAPE     + G    K 
Sbjct: 151 IKAGNILLTEPGQVKLADFGSASIASPANSFV-----GTPYWMAPEVILAMDEGQYDGKV 205

Query: 596 DVYSFGVVLLEI 607
           DV+S G+  +E+
Sbjct: 206 DVWSLGITCIEL 217

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 52.9 bits (127), Expect = 2e-07
 Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 16/140 (11%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSL-----ADLLFNLETRPLWRDRVRIALDVARGLLYLHD 528
           L Y  ++  KL L+ +F+  G L      +++F  E    +   + +ALD      +LH 
Sbjct: 63  LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD------HLHS 116

Query: 529 ECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS 588
              + II+ D+K  NIL+D+    K++DFGL+K  + ++    +   G+  YMAPE  N 
Sbjct: 117 ---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNR 172

Query: 589 GLITVKSDVYSFGVVLLEII 608
              T  +D +SFGV++ E++
Sbjct: 173 RGHTQSADWWSFGVLMFEML 192

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 53.1 bits (127), Expect = 2e-07
 Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 44/179 (24%)

Query: 447 DKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR 506
           DK   LT L  C  ++  L F                   V E+++ G   DL+++++  
Sbjct: 58  DKPPFLTQLHSCFQTVDRLYF-------------------VMEYVNGG---DLMYHIQQV 95

Query: 507 PLWRD--RVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLM 564
             +++   V  A +++ GL +LH      II+ D+KL N+++D     KI+DFG+ K  M
Sbjct: 96  GKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM 152

Query: 565 PNQTGIVAGVR-----GSRGYMAPE---WQNSGLITVKSDVYSFGVVLLEIICCRSNFE 615
                 V GV      G+  Y+APE   +Q  G      D +++GV+L E++  +  F+
Sbjct: 153 ------VDGVTTRTFCGTPDYIAPEIIAYQPYGK---SVDWWAYGVLLYEMLAGQPPFD 202

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 52.2 bits (125), Expect = 2e-07
 Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 5/94 (5%)

Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYM 581
           G+ Y+H   + +I+H D+K +NI + ++   KI DFG+++LLM     +     G+  YM
Sbjct: 118 GVHYMH---QRRILHRDLKAKNIFLKNNL-LKIGDFGVSRLLM-GSCDLATTFTGTPYYM 172

Query: 582 APEWQNSGLITVKSDVYSFGVVLLEIICCRSNFE 615
           +PE         KSD++S G +L E+ C    FE
Sbjct: 173 SPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFE 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 52.4 bits (126), Expect = 3e-07
 Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 25/198 (12%)

Query: 486 LVYEFMSKGSLADLLFN-------LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCD 538
           +V E    G L+ ++ +       +  R +W+  V++       L ++H     +I+H D
Sbjct: 79  IVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLC----SALEHMH---SKRIMHRD 131

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           IK  N+ I  +   K+ D GL +      T   + V G+  YM+PE  +      KSD++
Sbjct: 132 IKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYNFKSDIW 190

Query: 599 SFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKT 658
           S G +L E+   +S F       D++ L + +       ++  L  +   +  L  +V  
Sbjct: 191 SLGCLLYEMAALQSPFY-----GDKMNLYS-LCKKIEKCDYPPLPADHYSE-ELRDLVS- 242

Query: 659 GLLCIQDEPNLRPSMKNV 676
              CI  +P  RP +  V
Sbjct: 243 --RCINPDPEKRPDISYV 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 52.7 bits (126), Expect = 3e-07
 Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 27/141 (19%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRD--RVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
            V E+++ G   DL++ ++    +++   V  A ++A GL +LH +    II+ D+KL N
Sbjct: 78  FVMEYVNGG---DLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDN 131

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPE---WQNSGLITVKS 595
           +++D     KI+DFG+ K        +  GV      G+  Y+APE   +Q  G    KS
Sbjct: 132 VMLDSEGHIKIADFGMCK------ENMWDGVTTKTFCGTPDYIAPEIIAYQPYG----KS 181

Query: 596 -DVYSFGVVLLEIICCRSNFE 615
            D ++FGV+L E++  ++ FE
Sbjct: 182 VDWWAFGVLLYEMLAGQAPFE 202

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 52.0 bits (124), Expect = 3e-07
 Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 12/125 (9%)

Query: 489 EFMSKGSLADLL--FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI 546
           E M  GS+ D L  +   T  + R   R  L+   G+ YLH      I+H DIK  NIL 
Sbjct: 86  EHMPGGSIKDQLKSYGALTENVTRKYTRQILE---GVSYLHSN---MIVHRDIKGANILR 139

Query: 547 DDSWRAKISDFGLAKLLMP---NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           D     K+ DFG +K L     + TG+ + V G+  +M+PE  +      K+D++S G  
Sbjct: 140 DSVGNVKLGDFGASKRLQTICLSGTGMKS-VTGTPYWMSPEVISGEGYGRKADIWSVGCT 198

Query: 604 LLEII 608
           ++E++
Sbjct: 199 VVEML 203

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 52.0 bits (124), Expect = 4e-07
 Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 12/127 (9%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKL 541
            +V E+++ GSL D++   ET     D  +IA    +  + L +LH     Q+IH DIK 
Sbjct: 92  FVVMEYLAGGSLTDVV--TET---CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKS 143

Query: 542 RNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFG 601
            N+L+      K++DFG    + P Q+     V G+  +MAPE         K D++S G
Sbjct: 144 DNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLG 202

Query: 602 VVLLEII 608
           ++ +E++
Sbjct: 203 IMAIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 52.0 bits (124), Expect = 4e-07
 Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 12/126 (9%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLR 542
           +V E+++ GSL D++   ET     D  +IA    +  + L +LH     Q+IH DIK  
Sbjct: 94  VVMEYLAGGSLTDVV--TET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSD 145

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           NIL+      K++DFG    + P Q+     V G+  +MAPE         K D++S G+
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGI 204

Query: 603 VLLEII 608
           + +E+I
Sbjct: 205 MAIEMI 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 52.2 bits (125), Expect = 4e-07
 Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 29/178 (16%)

Query: 467 FLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLL 524
           FL A+      K R      V E+++ G   DL+F ++ +R     R R  A +V   L+
Sbjct: 57  FLTALHCCFQTKDRL---FFVMEYVNGG---DLMFQIQRSRKFDEPRSRFYAAEVTLALM 110

Query: 525 YLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRG 579
           +LH      +I+ D+KL NIL+D     K++DFG+ K       GI+ GV      G+  
Sbjct: 111 FLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCK------EGILNGVTTTTFCGTPD 161

Query: 580 YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTA-------DEVLLSTWV 630
           Y+APE           D ++ GV++ E++  +  FE +           D+VL   W+
Sbjct: 162 YIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWL 219

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 52.0 bits (124), Expect = 4e-07
 Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 14/132 (10%)

Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCD 538
           R     LV E+   GS +DLL  +  +PL    +  +     +GL YLH      +IH D
Sbjct: 86  REHTAWLVMEY-CLGSASDLL-EVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRD 140

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE---WQNSGLITVKS 595
           +K  NIL+ +    K+ DFG A ++ P    +     G+  +MAPE     + G    K 
Sbjct: 141 VKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDEGQYDGKV 195

Query: 596 DVYSFGVVLLEI 607
           DV+S G+  +E+
Sbjct: 196 DVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 52.3 bits (125), Expect = 5e-07
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 19/137 (13%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV  FM      DL   ++   L  DR++ +   + +GL Y+H      IIH D+K  N+
Sbjct: 97  LVMPFMG----TDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNL 149

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSF 600
            +++    KI DFGLA+      TG V     +R Y APE    W +    T   D++S 
Sbjct: 150 AVNEDCELKILDFGLARQTDSEMTGYVV----TRWYRAPEVILNWMH---YTQTVDIWSV 202

Query: 601 GVVLLEIICCRSNFEVN 617
           G ++ E++  +  F+ +
Sbjct: 203 GCIMAEMLTGKPLFKGH 219

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 51.3 bits (124), Expect = 5e-07
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 11/85 (12%)

Query: 481 SSKKL-LVYEFMSKGSLADL--LFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIH 536
           + +KL LV+E+       DL    +    PL  + ++ I   + RGL Y H     +I+H
Sbjct: 69  TERKLYLVFEYCDM----DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH---SHRILH 121

Query: 537 CDIKLRNILIDDSWRAKISDFGLAK 561
            D+K +NILI+     K++DFGLA+
Sbjct: 122 RDLKPQNILINRDGVLKLADFGLAR 146

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 51.6 bits (123), Expect = 5e-07
 Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 12/126 (9%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V EF+  G+L D++    TR        + L V + L  LH +    +IH DIK  +IL
Sbjct: 94  VVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSIL 148

Query: 546 IDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +    R K+SDFG    +   +P +  +V    G+  +MAPE  +      + D++S G+
Sbjct: 149 LTHDGRVKLSDFGFCAQVSKEVPRRKSLV----GTPYWMAPELISRLPYGPEVDIWSLGI 204

Query: 603 VLLEII 608
           +++E++
Sbjct: 205 MVIEMV 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 51.4 bits (124), Expect = 5e-07
 Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 28/134 (20%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLYLHDECEVQIIHC 537
           LV E++  G L   L         R   R    VAR         L YLH      I++ 
Sbjct: 78  LVMEYVPGGELFSHL---------RKSGRFPEPVARFYAAQVVLALEYLHSL---DIVYR 125

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKS- 595
           D+K  N+L+D     KI+DFG AK +      +     G+  Y+APE   + G    K+ 
Sbjct: 126 DLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLC----GTPEYLAPEIILSKG--YGKAV 179

Query: 596 DVYSFGVVLLEIIC 609
           D ++ G+++ E++ 
Sbjct: 180 DWWALGILIYEMLA 193

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 51.9 bits (125), Expect = 6e-07
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 15/96 (15%)

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ-------TGIVAG 573
           RGL Y+H      +IH D+K  N+L+++    +I DFG+A+ L  +        T  VA 
Sbjct: 118 RGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVA- 173

Query: 574 VRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEII 608
              +R Y APE   S    T   D++S G +  E++
Sbjct: 174 ---TRWYRAPELLLSLPEYTTAIDMWSVGCIFAEML 206

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 51.3 bits (122), Expect = 6e-07
 Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 12/126 (9%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLR 542
           +V E+++ GSL D++   ET     D  +IA    +  + L +LH     Q+IH DIK  
Sbjct: 93  VVMEYLAGGSLTDVV--TET---CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSD 144

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           NIL+      K++DFG    + P Q+     V G+  +MAPE         K D++S G+
Sbjct: 145 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGI 203

Query: 603 VLLEII 608
           + +E++
Sbjct: 204 MAIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 51.2 bits (122), Expect = 7e-07
 Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 31/142 (21%)

Query: 511 DRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK--------L 562
           D V I   +A G+ +L       ++H D+  RN+L+ D    KISD GL +         
Sbjct: 125 DFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYK 181

Query: 563 LMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII-------CCRSNFE 615
           LM N    +  +R    +M+PE    G  ++ SD++S+GVVL E+        C  SN +
Sbjct: 182 LMGNS---LLPIR----WMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD 234

Query: 616 V-NVSTADEVLL-----STWVY 631
           V  +    +VL        WVY
Sbjct: 235 VIEMIRNRQVLPCPDDCPAWVY 256

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 51.1 bits (122), Expect = 7e-07
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 24/143 (16%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLW-----------RDRVRIALDVARGLLYLHDECEVQI 534
           ++ E+M  G L   L   E    +            + + +A+ +A G+ YL     +  
Sbjct: 94  MITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYL---ASLNF 150

Query: 535 IHCDIKLRNILIDDSWRAKISDFGLAKLLMPN-----QTGIVAGVRGSRGYMAPEWQNSG 589
           +H D+  RN L+ + +  KI+DFG+++ L        Q   V  +R    +MA E    G
Sbjct: 151 VHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIR----WMAWESILLG 206

Query: 590 LITVKSDVYSFGVVLLEI-ICCR 611
             T  SDV++FGV L E+   C+
Sbjct: 207 KFTTASDVWAFGVTLWEMFTLCK 229

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 51.1 bits (122), Expect = 1e-06
 Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 18/148 (12%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEV 532
           L Y  ++  KL L+ +++S G +   L+  +      D VR    ++   L +LH   ++
Sbjct: 70  LHYAFQTEAKLHLILDYVSGGEMFTHLYQRDN--FSEDEVRFYSGEIILALEHLH---KL 124

Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
            I++ DIKL NIL+D      ++DFGL+K  +  +        G+  YMAPE     +I 
Sbjct: 125 GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPE-----IIR 179

Query: 593 VKS------DVYSFGVVLLEIICCRSNF 614
            K       D +S G+++ E++   S F
Sbjct: 180 GKGGHGKAVDWWSLGILIFELLTGASPF 207

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 50.9 bits (122), Expect = 1e-06
 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN---QTGIVAGVRGS 577
            GL Y+H      ++H D+K  N+L++     KI DFGLA+    N     G +     +
Sbjct: 116 CGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVAT 172

Query: 578 RGYMAPEWQNSGLITVKS-DVYSFGVVLLEII 608
           R Y APE   S     K+ DV+S G +L E++
Sbjct: 173 RWYRAPEIMLSFQSYTKAIDVWSVGCILAELL 204

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 6/97 (6%)

Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYM 581
           G+ ++H++   +++H DIK +NI +  + + K+ DFG A+LL  +         G+  Y+
Sbjct: 112 GVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLL-TSPGAYACTYVGTPYYV 167

Query: 582 APE-WQNSGLITVKSDVYSFGVVLLEIICCRSNFEVN 617
            PE W+N      KSD++S G +L E+   +  F+ N
Sbjct: 168 PPEIWENMPY-NNKSDIWSLGCILYELCTLKHPFQAN 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 50.1 bits (120), Expect = 1e-06
 Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 9/126 (7%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRI---ALDVARGLLYLHDECEVQIIHCDIKLR 542
           +V E    G L   L   +      D   +   +  ++  L YL      + +H DI  R
Sbjct: 83  IVMELAPLGELRSYL---QVNKYSLDLASLILYSYQLSTALAYLES---KRFVHRDIAAR 136

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           N+L+      K+ DFGL++ L        +  +    +MAPE  N    T  SDV+ FGV
Sbjct: 137 NVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 196

Query: 603 VLLEII 608
            + EI+
Sbjct: 197 CMWEIL 202

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 50.5 bits (121), Expect = 1e-06
 Identities = 49/152 (32%), Positives = 68/152 (44%), Gaps = 13/152 (8%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEV 532
           L+Y  +  + L L  E++  G    LL NL    L  D  R  + ++   +  LH   E+
Sbjct: 66  LLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGV--LSEDHARFYMAEMFEAVDALH---EL 120

Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
             IH D+K  N LID S   K++DFGL+K            V GS  YMAPE        
Sbjct: 121 GYIHRDLKPENFLIDASGHIKLTDFGLSK----GIVTYANSVVGSPDYMAPEVLRGKGYD 176

Query: 593 VKSDVYSFGVVLLEIICCRSNFEVNVSTADEV 624
              D +S G +L E +C    F  + ST +E 
Sbjct: 177 FTVDYWSLGCMLYEFLCGFPPF--SGSTPNET 206

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 50.2 bits (120), Expect = 2e-06
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 27/108 (25%)

Query: 512 RVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK---------- 561
           +V +   +A G+ +L +    + +H D+  RN L+      K+S   L+K          
Sbjct: 119 KVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKL 175

Query: 562 --LLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
              L+P        +R    ++APE       + KSDV+SFGV++ E+
Sbjct: 176 RNALIP--------LR----WLAPEAVQEDDFSTKSDVWSFGVLMWEV 211

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 50.3 bits (121), Expect = 2e-06
 Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 25/101 (24%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVA---------- 520
           I  L V+ H+S+  L V+EFM      DL        + +D+  I L  A          
Sbjct: 65  IGLLDVFGHKSNINL-VFEFME----TDL------EKVIKDK-SIVLTPADIKSYMLMTL 112

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK 561
           RGL YLH      I+H D+K  N+LI      K++DFGLA+
Sbjct: 113 RGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLAR 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 50.0 bits (119), Expect = 2e-06
 Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 15/135 (11%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVR---IALDVARGLLYLHDECEVQIIHCDIKL 541
             V E+++ G   DL+F++++   + D  R    A ++  GL +LH +    I++ D+KL
Sbjct: 72  FFVMEYLNGG---DLMFHIQSCHKF-DLPRATFYAAEIICGLQFLHSK---GIVYRDLKL 124

Query: 542 RNILIDDSWRAKISDFGLAK--LLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
            NIL+D     KI+DFG+ K  +L   +T       G+  Y+APE           D +S
Sbjct: 125 DNILLDTDGHIKIADFGMCKENMLGDAKTCTFC---GTPDYIAPEILLGQKYNTSVDWWS 181

Query: 600 FGVVLLEIICCRSNF 614
           FGV+L E++  +S F
Sbjct: 182 FGVLLYEMLIGQSPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 49.6 bits (118), Expect = 2e-06
 Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 13/131 (9%)

Query: 485 LLVYEFMSKGSLADLLF--NLETRPLW---RDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +++  FM  G L   L    L   P +   +  V+   D+A G+ YL  +     IH D+
Sbjct: 82  VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDL 138

Query: 540 KLRNILIDDSWRAKISDFGLAKLLMPN---QTGIVAGVRGSRGYMAPEWQNSGLITVKSD 596
             RN +++++    ++DFGL+K +      + G +A  +    ++A E     + T KSD
Sbjct: 139 AARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIA--KMPVKWIAIESLADRVYTTKSD 196

Query: 597 VYSFGVVLLEI 607
           V+SFGV + EI
Sbjct: 197 VWSFGVTMWEI 207

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 49.6 bits (119), Expect = 2e-06
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 17/135 (12%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHC 537
            R  K  LV+E + +  LA  L       L  + ++ +   + RG+ +LH      I+H 
Sbjct: 76  DRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHR 131

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPE--WQNSGLIT 592
           D+K +NIL+    + KI+DFGLA++    M   T +V     +  Y APE   Q+S    
Sbjct: 132 DLKPQNILVTSDGQVKIADFGLARIYSFEMA-LTSVVV----TLWYRAPEVLLQSSYATP 186

Query: 593 VKSDVYSFGVVLLEI 607
           V  D++S G +  E+
Sbjct: 187 V--DMWSVGCIFAEL 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 49.1 bits (117), Expect = 2e-06
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 6/95 (6%)

Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGV-RGSRGY 580
            L ++HD    +I+H DIK +NI +      K+ DFG+A++L  N T  +A    G+  Y
Sbjct: 113 ALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVL--NSTVELARTCIGTPYY 167

Query: 581 MAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFE 615
           ++PE   +     KSD+++ G VL E+   +  FE
Sbjct: 168 LSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFE 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 49.5 bits (119), Expect = 3e-06
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 3/40 (7%)

Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK 561
           GL YLH      I+H DIK  NILI++    K++DFGLA+
Sbjct: 112 GLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLAR 148

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 49.3 bits (118), Expect = 3e-06
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 12/100 (12%)

Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN-----Q 567
           + +A  +A G+ YL     +  +H D+  RN L+  ++  KI+DFG+++ L  +     Q
Sbjct: 133 LYMATQIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQ 189

Query: 568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
                 +R    +MA E    G  T KSDV++FGV L EI
Sbjct: 190 GRAPLPIR----WMAWESVLLGKFTTKSDVWAFGVTLWEI 225

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 49.2 bits (117), Expect = 3e-06
 Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 11/148 (7%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDR-VRIAL-DVARGLLYLHDECE 531
           L Y  ++  KL L+ ++++ G   +L  +L  R  ++++ V+I   ++   L +LH   +
Sbjct: 70  LHYAFQTDTKLHLILDYINGG---ELFTHLSQRERFKEQEVQIYSGEIVLALEHLH---K 123

Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLI 591
           + II+ DIKL NIL+D +    ++DFGL+K    ++        G+  YMAP+    G  
Sbjct: 124 LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDG 183

Query: 592 TVKS--DVYSFGVVLLEIICCRSNFEVN 617
                 D +S GV++ E++   S F V+
Sbjct: 184 GHDKAVDWWSMGVLMYELLTGASPFTVD 211

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family

 Score = 45.7 bits (109), Expect = 4e-06
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 7/81 (8%)

Query: 245 SSYSLKSMNETVIYRTTLDSDGILRLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNS 304
             Y+ +  N ++  R TL S+G L  ++       +    + WSA + QC V G CG   
Sbjct: 34  VYYTYRMTNNSIYSRLTLSSEGSLERFTW---IPNSQDWNLFWSAPKDQCDVYGRCGPYG 90

Query: 305 YCSTSTNISTKGDCHCFRGFN 325
           YC    +++T   C+C +GF 
Sbjct: 91  YC----DVNTSPKCNCIKGFV 107

In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. Length = 110

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 48.6 bits (116), Expect = 5e-06
 Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 24/140 (17%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E++  G  A LL N+   P+   R+  A  V   L YLH+     I+H D+K  N+L
Sbjct: 78  MVMEYVEGGDCATLLKNIGALPVDMARMYFAETVL-ALEYLHN---YGIVHRDLKPDNLL 133

Query: 546 IDDSWRAKISDFGLAKL-LMPNQTGIVAG-------------VRGSRGYMAPE---WQNS 588
           I      K++DFGL+K+ LM   T +  G             V G+  Y+APE    Q  
Sbjct: 134 ITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGY 193

Query: 589 GLITVKSDVYSFGVVLLEII 608
           G      D ++ G++L E +
Sbjct: 194 G---KPVDWWAMGIILYEFL 210

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 48.9 bits (117), Expect = 5e-06
 Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 20/101 (19%)

Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL-----MPNQTGIVA---- 572
           G+ YLH+     I+H DIK  NILID+    KI+DFGLA+        P   G       
Sbjct: 127 GINYLHEN---HILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKY 183

Query: 573 -GVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEII 608
             +  +R Y  PE     +     T   D++  G V  E+ 
Sbjct: 184 TNLVVTRWYRPPELLLGERR---YTTAVDIWGIGCVFAEMF 221

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 48.1 bits (115), Expect = 6e-06
 Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 18/112 (16%)

Query: 480 RSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRV---RIALDVARGLLYLHDECEVQII 535
           R  +KL LV+E+        +L  LE  P         +I     + + + H       I
Sbjct: 70  RRKRKLHLVFEYCDH----TVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH---NCI 122

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAKLLMP---NQTGIVAGVRGSRGYMAPE 584
           H D+K  NILI    + K+ DFG A++L     + T  VA    +R Y APE
Sbjct: 123 HRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVA----TRWYRAPE 170

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 47.7 bits (113), Expect = 8e-06
 Identities = 45/201 (22%), Positives = 89/201 (44%), Gaps = 31/201 (15%)

Query: 486 LVYEFMSKGSLADLLFNLET-------RPLWRDRVRIALDVARGLLYLHDECEVQIIHCD 538
           +V E    G L+ ++   +        R +W+  V++       + ++H     +++H D
Sbjct: 79  IVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLC----SAVEHMHSR---RVMHRD 131

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           IK  N+ I  +   K+ D GL +    ++T     + G+  YM+PE  +      KSD++
Sbjct: 132 IKPANVFITATGVVKLGDLGLGRFF-SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIW 190

Query: 599 SFGVVLLEIICCRSNF---EVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERM 655
           S G +L E+   +S F   ++N+ +     L   +  C    ++  L  E       E++
Sbjct: 191 SLGCLLYEMAALQSPFYGDKMNLFS-----LCQKIEQC----DYPPLPTEHYS----EKL 237

Query: 656 VKTGLLCIQDEPNLRPSMKNV 676
            +   +CI  +P+ RP +  V
Sbjct: 238 RELVSMCIYPDPDQRPDIGYV 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 48.0 bits (114), Expect = 9e-06
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 13/106 (12%)

Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN-----Q 567
           + +AL +A G+ YL     +  +H D+  RN L+ ++   KI+DFG+++ L        Q
Sbjct: 141 LHVALQIASGMKYL---SSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQ 197

Query: 568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII-CCRS 612
              V  +R    +MA E    G  T  SDV++FGV L EI+  C+ 
Sbjct: 198 GRAVLPIR----WMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 47.7 bits (113), Expect = 1e-05
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 10/137 (7%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRD-RVRI-ALDVARGLLYLHDECE 531
           L Y  ++++KL  V ++++ G   +L F+L+    + + R R  A +VA  + YLH    
Sbjct: 61  LHYSFQTAEKLYFVLDYVNGG---ELFFHLQRERCFLEPRARFYAAEVASAIGYLH---S 114

Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLI 591
           + II+ D+K  NIL+D      ++DFGL K  +  +    +   G+  Y+APE       
Sbjct: 115 LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ETTSTFCGTPEYLAPEVLRKEPY 173

Query: 592 TVKSDVYSFGVVLLEII 608
               D +  G VL E++
Sbjct: 174 DRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 47.2 bits (112), Expect = 1e-05
 Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 23/182 (12%)

Query: 444 KVNDKRKLL----TVLAGCLGSITFLCFLIAISSLLVYKH-----------RSSKKLLVY 488
           K+  KR+L     T+ AGC        FL    +L  + H           R +  ++V 
Sbjct: 27  KLPSKRELPVAIHTLRAGCSDK-QRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVT 85

Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD 548
           E+MS G+L   L   E + +    + +   +A G+ YL    E+  +H  +    +L++ 
Sbjct: 86  EYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYL---SEMGYVHKGLAAHKVLVNS 142

Query: 549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVVLLE 606
               KIS F   +L       I   + G     + APE       +  SDV+SFG+V+ E
Sbjct: 143 DLVCKISGFR--RLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWE 200

Query: 607 II 608
           ++
Sbjct: 201 VM 202

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 47.3 bits (112), Expect = 1e-05
 Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 12/139 (8%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDR-VRI-ALDVARGLLYLHDECEVQIIH 536
           H   K   + + M+ G   DL ++L    ++ ++ +R  A ++  GL ++H+     +++
Sbjct: 67  HTPDKLCFILDLMNGG---DLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRF---VVY 120

Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKS 595
            D+K  NIL+D+    +ISD GLA      +    A V G+ GYMAPE  Q        +
Sbjct: 121 RDLKPANILLDEHGHVRISDLGLACDFSKKKPH--ASV-GTHGYMAPEVLQKGTAYDSSA 177

Query: 596 DVYSFGVVLLEIICCRSNF 614
           D +S G +L +++   S F
Sbjct: 178 DWFSLGCMLFKLLRGHSPF 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 47.0 bits (111), Expect = 2e-05
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 14/92 (15%)

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGY 580
           RGL Y+H      IIH D+K  N+ +++    +I DFGLA+      TG VA    +R Y
Sbjct: 129 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVA----TRWY 181

Query: 581 MAPE----WQNSGLITVKSDVYSFGVVLLEII 608
            APE    W +    TV  D++S G ++ E++
Sbjct: 182 RAPEIMLNWMHYNQ-TV--DIWSVGCIMAELL 210

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 46.6 bits (110), Expect = 2e-05
 Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 15/136 (11%)

Query: 486 LVYEFMSKGSLADLLFNLET-------RPLWRDRVRIALDVARGLLYLHDECEVQIIHCD 538
           +V E    G L+ ++ + +        + +W+  V++       L ++H     +++H D
Sbjct: 79  IVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLC----SALEHMHSR---RVMHRD 131

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           IK  N+ I  +   K+ D GL +    ++T     + G+  YM+PE  +      KSD++
Sbjct: 132 IKPANVFITATGVVKLGDLGLGRFF-SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIW 190

Query: 599 SFGVVLLEIICCRSNF 614
           S G +L E+   +S F
Sbjct: 191 SLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 46.9 bits (112), Expect = 2e-05
 Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 46/158 (29%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-------IALDVARGLLYLHDECEVQIIHCD 538
           LV E+M  G L +LL   +  P   +  R       +ALD    L +         IH D
Sbjct: 78  LVMEYMPGGDLMNLLIRKDVFP--EETARFYIAELVLALDSVHKLGF---------IHRD 126

Query: 539 IKLRNILIDDSWRAKISDFGLAK---------------LLMPNQTGIVAGVR-------- 575
           IK  NILID     K++DFGL K                 +  +  ++   R        
Sbjct: 127 IKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVR 186

Query: 576 -----GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
                G+  Y+APE        ++ D +S GV+L E++
Sbjct: 187 ANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEML 224

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 46.2 bits (109), Expect = 3e-05
 Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 19/132 (14%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ EF + G++  ++  LE RPL   ++R+        L YLH+    +IIH D+K  NI
Sbjct: 79  ILIEFCAGGAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNI 134

Query: 545 LIDDSWRAKISDFGLA----KLLMPNQTGIVAGVRGSRGYMAP-----EWQNSGLITVKS 595
           L       K++DFG++    + +    + I     G+  +MAP     E         K+
Sbjct: 135 LFTLDGDIKLADFGVSAKNTRTIQRRDSFI-----GTPYWMAPEVVMCETSKDRPYDYKA 189

Query: 596 DVYSFGVVLLEI 607
           DV+S G+ L+E+
Sbjct: 190 DVWSLGITLIEM 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 46.5 bits (110), Expect = 3e-05
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 12/138 (8%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLE---TRPLWRDRVRIALDVARGLLYLHDEC 530
           L Y  ++++KL  V +F++ G   +L F+L+   + P  R R   A ++A  L YLH   
Sbjct: 61  LHYSFQTTEKLYFVLDFVNGG---ELFFHLQRERSFPEPRARFYAA-EIASALGYLH--- 113

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
            + I++ D+K  NIL+D      ++DFGL K  +  Q+       G+  Y+APE      
Sbjct: 114 SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGI-AQSDTTTTFCGTPEYLAPEVIRKQP 172

Query: 591 ITVKSDVYSFGVVLLEII 608
                D +  G VL E++
Sbjct: 173 YDNTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 46.1 bits (109), Expect = 3e-05
 Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 13/145 (8%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLW--RDRVRIALDVARGLLYLHDECE 531
           + Y   +  KL  + + M+ G   DL ++L    ++   +    A ++  GL ++H+   
Sbjct: 62  MSYAFHTPDKLSFILDLMNGG---DLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRF- 117

Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLI 591
             +++ D+K  NIL+D+    +ISD GLA      +    A V G+ GYMAPE    G+ 
Sbjct: 118 --VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH--ASV-GTHGYMAPEVLQKGVA 172

Query: 592 TVKS-DVYSFGVVLLEIICCRSNFE 615
              S D +S G +L +++   S F 
Sbjct: 173 YDSSADWFSLGCMLFKLLRGHSPFR 197

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 45.4 bits (107), Expect = 5e-05
 Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 16/135 (11%)

Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCD 538
           R  K  +  EF   GSL D+     T PL   ++  ++ +  +GL YLH + +   +H D
Sbjct: 77  RRDKLWICMEFCGGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKGK---MHRD 131

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR---GSRGYMAPE---WQNSGLIT 592
           IK  NIL+ D+   K++DFG++  +    T  +A  +   G+  +MAPE    +  G   
Sbjct: 132 IKGANILLTDNGHVKLADFGVSAQI----TATIAKRKSFIGTPYWMAPEVAAVERKGGYN 187

Query: 593 VKSDVYSFGVVLLEI 607
              D+++ G+  +E+
Sbjct: 188 QLCDIWAVGITAIEL 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 45.8 bits (108), Expect = 5e-05
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 21/139 (15%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRD----RVRIALDVARGLLYLHDECEVQIIHCDIKL 541
           +V E+M  G L +L+ N +    W       V +ALD    +          +IH D+K 
Sbjct: 120 MVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM---------GLIHRDVKP 170

Query: 542 RNILIDDSWRAKISDFGLAKLLMPNQTGIVA--GVRGSRGYMAPEWQNS----GLITVKS 595
            N+L+D     K++DFG    +  ++TG+V      G+  Y++PE   S    G    + 
Sbjct: 171 DNMLLDKHGHLKLADFGTCMKM--DETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGREC 228

Query: 596 DVYSFGVVLLEIICCRSNF 614
           D +S GV L E++   + F
Sbjct: 229 DWWSVGVFLFEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 45.2 bits (107), Expect = 6e-05
 Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 32/151 (21%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVA----------RGLLYLHD 528
           H  +K +LV+E+M K    DL   ++T       VR ALD            +G+ + H+
Sbjct: 68  HTENKLMLVFEYMDK----DLKKYMDTHG-----VRGALDPNTVKSFTYQLLKGIAFCHE 118

Query: 529 ECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR----GYMAPE 584
               +++H D+K +N+LI+     K++DFGLA+       GI      +      Y AP+
Sbjct: 119 N---RVLHRDLKPQNLLINKRGELKLADFGLARAF-----GIPVNTFSNEVVTLWYRAPD 170

Query: 585 -WQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
               S   +   D++S G ++ E+I  R  F
Sbjct: 171 VLLGSRTYSTSIDIWSVGCIMAEMITGRPLF 201

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 45.1 bits (107), Expect = 7e-05
 Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 19/197 (9%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E+ ++G L ++L   E    ++ ++ +A+D  +GL  L+        + ++   + L
Sbjct: 99  LILEYCTRGYLREVLDK-EKDLSFKTKLDMAIDCCKGLYNLYKYTNKP--YKNLTSVSFL 155

Query: 546 IDDSWRAKISDFGLAKLL-MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           + ++++ KI   GL K+L  P    +   V  S   +   +      T+K D+YS GVVL
Sbjct: 156 VTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSE---YTIKDDIYSLGVVL 212

Query: 605 LEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQ 664
            EI   +  FE N++T +       +Y+  +    NK    ++       +      C  
Sbjct: 213 WEIFTGKIPFE-NLTTKE-------IYDLII----NKNNSLKLPLDCPLEIKCIVEACTS 260

Query: 665 DEPNLRPSMKNVILMLE 681
            +   RP++K ++  L 
Sbjct: 261 HDSIKRPNIKEILYNLS 277

Length = 283

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 44.5 bits (106), Expect = 8e-05
 Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 15/143 (10%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRN 543
           +L+ +++  G L DLL       L    V+ I   +   L  LH      IIH DIKL N
Sbjct: 85  VLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLEN 139

Query: 544 ILIDDS-WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +L D +  R  + D+GL K  +           G+  Y +PE        V  D ++ GV
Sbjct: 140 VLYDRAKDRIYLCDYGLCK--IIGTPSC---YDGTLDYFSPEKIKGHNYDVSFDWWAVGV 194

Query: 603 VLLEIICCRSNFEVNVSTADEVL 625
           +  E++  +  F+ +    DE L
Sbjct: 195 LTYELLTGKHPFKEDE---DEEL 214

Length = 267

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 45.0 bits (106), Expect = 8e-05
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 12/138 (8%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLLYLHDECE 531
           L +  +++ KL  V ++++ G   +L ++L+  R     R R  A ++A  L YLH    
Sbjct: 61  LHFSFQTADKLYFVLDYINGG---ELFYHLQRERCFLEPRARFYAAEIASALGYLH---S 114

Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKL-LMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           + I++ D+K  NIL+D      ++DFGL K  +  N  G  +   G+  Y+APE  +   
Sbjct: 115 LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--GTTSTFCGTPEYLAPEVLHKQP 172

Query: 591 ITVKSDVYSFGVVLLEII 608
                D +  G VL E++
Sbjct: 173 YDRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 44.8 bits (106), Expect = 8e-05
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 12/138 (8%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLLYLHDECE 531
           L Y  +++ KL  V ++++ G   +L F+L+  R     R R  A ++A  L YLH    
Sbjct: 61  LHYSFQTADKLYFVLDYVNGG---ELFFHLQRERSFPEPRARFYAAEIASALGYLH---S 114

Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPEWQNSGL 590
           + II+ D+K  NIL+D      ++DFGL K  +  ++T   +   G+  Y+APE      
Sbjct: 115 LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKT--TSTFCGTPEYLAPEVLRKQP 172

Query: 591 ITVKSDVYSFGVVLLEII 608
                D +  G VL E++
Sbjct: 173 YDRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 44.5 bits (105), Expect = 9e-05
 Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 22/138 (15%)

Query: 486 LVYEFMSKGSLADLLFNLE----------TRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           ++ E+M  G L   L   E              +   + +A  +A G+ YL     +  +
Sbjct: 96  MITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFV 152

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPN-----QTGIVAGVRGSRGYMAPEWQNSGL 590
           H D+  RN L+  ++  KI+DFG+++ L        Q   V  +R    +M+ E    G 
Sbjct: 153 HRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIR----WMSWESILLGK 208

Query: 591 ITVKSDVYSFGVVLLEII 608
            T  SDV++FGV L EI+
Sbjct: 209 FTTASDVWAFGVTLWEIL 226

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 44.8 bits (106), Expect = 1e-04
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 516 ALDVARGLL----YLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA-KLLMPNQTGI 570
           A+ + R LL    YLH      IIH D+K  NI +D+   A + DFG A KL     T  
Sbjct: 187 AITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ 243

Query: 571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
             G  G+    +PE         K+D++S G+VL E+
Sbjct: 244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEM 280

Length = 392

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 44.6 bits (105), Expect = 1e-04
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)

Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP---LWRDRVR-IALDVARGLLYLHDECEVQII 535
           R +K  LV+E + +    DL   L+  P   +  + ++ +   + RGL +LH     +++
Sbjct: 80  RETKLTLVFEHVDQ----DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVV 132

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKS 595
           H D+K +NIL+  S + K++DFGLA++   +    +  V  +  Y APE           
Sbjct: 133 HRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWYRAPEVLLQSSYATPV 190

Query: 596 DVYSFGVVLLEIICCRSNFEVNVSTADEV 624
           D++S G +  E+   +  F  + S  D++
Sbjct: 191 DLWSVGCIFAEMFRRKPLFRGS-SDVDQL 218

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 44.9 bits (106), Expect = 1e-04
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGY 580
            GL Y+H      IIH D+K  N+ +++    KI DFGLA+      TG V     +R Y
Sbjct: 128 CGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWY 180

Query: 581 MAPE----WQNSGLITVKSDVYSFGVVLLEIICCRSNFE 615
            APE    W +        D++S G ++ E++  ++ F+
Sbjct: 181 RAPEVILNWMH---YNQTVDIWSVGCIMAEMLTGKTLFK 216

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 44.2 bits (104), Expect = 1e-04
 Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 6/135 (4%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ 533
           L +  +S +KL LV  F++ G   +L  +L+    + D  R     A  L  L +  +  
Sbjct: 58  LKFSFQSPEKLYLVLAFINGG---ELFHHLQREGRF-DLSRARFYTAELLCALENLHKFN 113

Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
           +I+ D+K  NIL+D      + DFGL KL M +         G+  Y+APE       T 
Sbjct: 114 VIYRDLKPENILLDYQGHIALCDFGLCKLNMKD-DDKTNTFCGTPEYLAPELLLGHGYTK 172

Query: 594 KSDVYSFGVVLLEII 608
             D ++ GV+L E++
Sbjct: 173 AVDWWTLGVLLYEML 187

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 44.9 bits (106), Expect = 1e-04
 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 15/96 (15%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLL-----FNLETRPLWRDRVRIALDVARGLLYLHD 528
           L Y  +S+  + LV E++  G +  LL     F+ E    +   V +ALD      YLH 
Sbjct: 69  LYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALD------YLHR 122

Query: 529 ECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLM 564
                IIH D+K  N+LI +    K++DFGL+K+ +
Sbjct: 123 H---GIIHRDLKPDNMLISNEGHIKLTDFGLSKVTL 155

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 44.6 bits (105), Expect = 1e-04
 Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 21/139 (15%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLW----RDRVRIALDVARGLLYLHDECEVQIIHCDIKL 541
           +V E+M  G L +L+ N +    W       V +ALD    + +         IH D+K 
Sbjct: 120 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF---------IHRDVKP 170

Query: 542 RNILIDDSWRAKISDFGLAKLLMPNQTGIVA--GVRGSRGYMAPEWQNS----GLITVKS 595
            N+L+D S   K++DFG    +  N+ G+V      G+  Y++PE   S    G    + 
Sbjct: 171 DNMLLDKSGHLKLADFGTCMKM--NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGREC 228

Query: 596 DVYSFGVVLLEIICCRSNF 614
           D +S GV L E++   + F
Sbjct: 229 DWWSVGVFLYEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 43.9 bits (104), Expect = 1e-04
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 10/79 (12%)

Query: 486 LVYEFMSKGSLADLLFNLETRP--LWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLR 542
           LV+E++      DL   ++     L    VR+ L  + RGL Y H     +++H D+K +
Sbjct: 80  LVFEYLDT----DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQ 132

Query: 543 NILIDDSWRAKISDFGLAK 561
           N+LI +    K++DFGLA+
Sbjct: 133 NLLISERGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 44.2 bits (105), Expect = 1e-04
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 27/88 (30%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCD 538
           HR +K++ +   M K     LL+ +             L+   G+ YLH      ++H D
Sbjct: 97  HRQAKRVSIPPSMVK----SLLWQI-------------LN---GVHYLHSN---WVLHRD 133

Query: 539 IKLRNILI----DDSWRAKISDFGLAKL 562
           +K  NIL+     +    KI D GLA+L
Sbjct: 134 LKPANILVMGEGPERGVVKIGDLGLARL 161

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 43.9 bits (104), Expect = 2e-04
 Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 19/149 (12%)

Query: 468 LIAISSLLVYKHRSSKK--LLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIAL-DVARGL 523
           +IAI  ++   HR +     +VYE M      DL   +  ++ L  D  +  L  + RGL
Sbjct: 66  VIAIKDIMPPPHREAFNDVYIVYELMD----TDLHQIIRSSQTLSDDHCQYFLYQLLRGL 121

Query: 524 LYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ---TGIVAGVRGSRGY 580
            Y+H      ++H D+K  N+L++ +   KI DFGLA+         T  V     +R Y
Sbjct: 122 KYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVV----TRWY 174

Query: 581 MAPE-WQNSGLITVKSDVYSFGVVLLEII 608
            APE   N    T   DV+S G +  E++
Sbjct: 175 RAPELLLNCSEYTTAIDVWSVGCIFAELL 203

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 44.2 bits (104), Expect = 2e-04
 Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 18/136 (13%)

Query: 486 LVYEFMSKGSLADLLFNLETR---PLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR 542
           LV ++MS G   +L ++L+        R +  IA ++   L +LH   +  I++ D+K  
Sbjct: 73  LVTDYMSGG---ELFWHLQKEGRFSEDRAKFYIA-ELVLALEHLH---KYDIVYRDLKPE 125

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQT--GIVAGVRGSRGYMAPE--WQNSGLITVKSDVY 598
           NIL+D +    + DFGL+K    N T         G+  Y+APE      G  T   D +
Sbjct: 126 NILLDATGHIALCDFGLSK---ANLTDNKTTNTFCGTTEYLAPEVLLDEKGY-TKHVDFW 181

Query: 599 SFGVVLLEIICCRSNF 614
           S GV++ E+ C  S F
Sbjct: 182 SLGVLVFEMCCGWSPF 197

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 43.8 bits (103), Expect = 2e-04
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 13/132 (9%)

Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP---LWRDRVR-IALDVARGLLYLHDECEVQII 535
           R +K  LV+E + +    DL   L+  P   L  + ++ +     RGL +LH  C   I+
Sbjct: 78  RETKVTLVFEHVDQ----DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC---IV 130

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKS 595
           H D+K  NIL+    + K++DFGLA++        +  V  +  Y APE           
Sbjct: 131 HRDLKPENILVTSGGQVKLADFGLARIYSCQMA--LTPVVVTLWYRAPEVLLQSTYATPV 188

Query: 596 DVYSFGVVLLEI 607
           D++S G +  E+
Sbjct: 189 DMWSVGCIFAEM 200

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 44.0 bits (104), Expect = 2e-04
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 15/102 (14%)

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLM---PNQ---TGIVAGV 574
           R L Y+H      + H D+K +NIL +   + KI DFGLA++     P     T  VA  
Sbjct: 114 RALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVA-- 168

Query: 575 RGSRGYMAPEWQNS--GLITVKSDVYSFGVVLLEIICCRSNF 614
             +R Y APE   S     T   D++S G +  E++  +  F
Sbjct: 169 --TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 208

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 43.4 bits (102), Expect = 2e-04
 Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 31/143 (21%)

Query: 485 LLVYEFMSKGSLADLLF------NLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCD 538
           LLV EF   G L   L        +   P      R+A ++A GLL+LH       IH D
Sbjct: 71  LLVMEFCPLGDLKGYLRSCRKAELMTPDP--TTLQRMACEIALGLLHLHKN---NFIHSD 125

Query: 539 IKLRNILIDDSWRAKISDFGLAKL-------LMPNQTGIVAGVRGSRGYMAPEWQN---S 588
           + LRN L+      KI D+GL+         + P+Q  +   +R    ++APE  +    
Sbjct: 126 LALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWV--PLR----WIAPELVDEVHG 179

Query: 589 GLITV----KSDVYSFGVVLLEI 607
            L+ V    +S+V+S GV + E+
Sbjct: 180 NLLVVDQTKESNVWSLGVTIWEL 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 34/211 (16%)

Query: 439 PIGNDKVNDKRKLLTVLAGCLGS--ITFLCFLIAISSLLVYKHRSSKKL----------L 486
              +  +    + ++V+   LGS     L F    S +    H+   KL          +
Sbjct: 18  VQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVRDENIM 77

Query: 487 VYEFMSKGSLADLLFNLETRPLWRD-RVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           V E++  G L D+  + E   +    ++ +A  +A  L YL D+   +++H ++  +NIL
Sbjct: 78  VEEYVKFGPL-DVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNIL 133

Query: 546 -IDDSWR------AKISDFGLAKLLMPNQTGIVAGVRGSRG-YMAPEWQNSGL--ITVKS 595
                         K+SD G+   ++  +       R  R  ++APE   +G   +T+ +
Sbjct: 134 VARYGLNEGYVPFIKLSDPGIPITVLSRE------ERVERIPWIAPECIRNGQASLTIAA 187

Query: 596 DVYSFGVVLLEIICCRSNFEVNVSTADEVLL 626
           D +SFG  LLE IC      ++  ++ E   
Sbjct: 188 DKWSFGTTLLE-ICSNGEEPLSTLSSSEKER 217

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 43.5 bits (103), Expect = 2e-04
 Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 11/95 (11%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRP---LWRDRVRIAL-DVARGLLYL 526
           I  LL   H  +K  LV+EF+      DL   +++ P   L    ++  L  + +G+ Y 
Sbjct: 60  IVRLLDVVHSENKLYLVFEFLD----LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYC 115

Query: 527 HDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK 561
           H     +++H D+K +N+LID     K++DFGLA+
Sbjct: 116 HSH---RVLHRDLKPQNLLIDREGALKLADFGLAR 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 10/86 (11%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRP--LWRDRVRIAL-DVARGLLYLHDECEVQII 535
           H      LV+E++      DL   ++  P  L  + V++ L  + RGL Y+H      I+
Sbjct: 73  HTKETLTLVFEYVH----TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YIL 125

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAK 561
           H D+K +N+LI D+   K++DFGLA+
Sbjct: 126 HRDLKPQNLLISDTGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 6/81 (7%)

Query: 346 CKRKMPA-EFYNITSLKITWLGGLPYAKLSVSKKDCSKSCLNDCYFGAAFY--SDGACSK 402
           C        F  +       L     A  ++S ++C ++CL++C   A  Y    G C  
Sbjct: 5   CGGDGSTDGFLKLPD---VKLPDNASAITAISLEECREACLSNCSCTAYAYNNGSGGCLL 61

Query: 403 HKFPLMFATKDQYASAILFIK 423
               L            L+++
Sbjct: 62  WNGLLNNLRSLSSGGGTLYLR 82

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 43.2 bits (102), Expect = 3e-04
 Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 12/96 (12%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRP----LWRDRVRIAL-DVARGLLY 525
           I  L     + S+  L++EF+S     DL   L++ P    +  + V+  L  + +G+L+
Sbjct: 61  IVCLQDVLMQESRLYLIFEFLS----MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILF 116

Query: 526 LHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK 561
            H     +++H D+K +N+LID+    K++DFGLA+
Sbjct: 117 CHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLAR 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 43.3 bits (102), Expect = 3e-04
 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 7/84 (8%)

Query: 525 YLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE 584
           YLH      II+ D+K  N+L+D+    K++DFG AK + P++T  +    G+  Y+APE
Sbjct: 133 YLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKV-PDRTFTLC---GTPEYLAPE 185

Query: 585 WQNSGLITVKSDVYSFGVVLLEII 608
              S       D ++ GV+L E I
Sbjct: 186 VIQSKGHGKAVDWWTMGVLLYEFI 209

Length = 329

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 43.4 bits (102), Expect = 3e-04
 Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 4/106 (3%)

Query: 511 DRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI 570
           D + I   V R + YLH+    +IIH DIK  NI I+      + DFG A   +      
Sbjct: 183 DILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANK 239

Query: 571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCR-SNFE 615
             G  G+    APE           D++S G+VL E+  C  S FE
Sbjct: 240 YYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285

Length = 391

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 43.2 bits (102), Expect = 3e-04
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 9/82 (10%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRI-ALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+M      DL   LE  PL  +  R+    + RGL Y+H      ++H D+K  N+
Sbjct: 93  IVQEYME----TDLANVLEQGPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANV 145

Query: 545 LID-DSWRAKISDFGLAKLLMP 565
            I+ +    KI DFGLA+++ P
Sbjct: 146 FINTEDLVLKIGDFGLARIVDP 167

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 43.1 bits (101), Expect = 3e-04
 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV E  + GS+ +L+  L       D   I+  +   LL L      +IIH D+K  NIL
Sbjct: 101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNIL 160

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAP-----EWQNSGLITVKSDVYSF 600
           +      K+ DFG++  L   +      V G+  +MAP     E Q       + DV+S 
Sbjct: 161 LTTEGGVKLVDFGVSAQLTSTRLRRNTSV-GTPFWMAPEVIACEQQYDYSYDARCDVWSL 219

Query: 601 GVVLLEI 607
           G+  +E+
Sbjct: 220 GITAIEL 226

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 42.7 bits (101), Expect = 4e-04
 Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 21/136 (15%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLR 542
           +V   M+ GS  DLL       L    + IA    DV   L Y+H +     IH  +K  
Sbjct: 76  VVSPLMAYGSCEDLLKTHFPEGL--PELAIAFILKDVLNALDYIHSK---GFIHRSVKAS 130

Query: 543 NILIDDSWRAKISDFGLAKLLMPN---QTGIVAGVRGSRG---YMAPE--WQNSGLITVK 594
           +IL+    +  +S    +  ++ +   Q  +    + S     +++PE   QN      K
Sbjct: 131 HILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEK 190

Query: 595 SDVYSFGVVLLEIICC 610
           SD+YS G     I  C
Sbjct: 191 SDIYSVG-----ITAC 201

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 42.7 bits (100), Expect = 4e-04
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 8/134 (5%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV ++   G L  LL   E R L  D  R  L  A  ++ +    ++  +H DIK  NIL
Sbjct: 78  LVMDYYVGGDLLTLLSKFEDR-LPEDMARFYL--AEMVIAIDSVHQLHYVHRDIKPDNIL 134

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW-----QNSGLITVKSDVYSF 600
           +D +   +++DFG    LM + T   +   G+  Y++PE         G    + D +S 
Sbjct: 135 MDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSL 194

Query: 601 GVVLLEIICCRSNF 614
           GV + E++   + F
Sbjct: 195 GVCMYEMLYGETPF 208

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 42.5 bits (100), Expect = 4e-04
 Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 19/152 (12%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL------DVARGLL 524
           I  LL   H  +K  LV+EF+ +    DL   ++  PL    + + L       + +GL 
Sbjct: 61  IVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASPL--SGIPLPLIKSYLFQLLQGLA 114

Query: 525 YLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL-MPNQTGIVAGVRGSRGYMAP 583
           + H     +++H D+K +N+LI+     K++DFGLA+   +P +T     V  +  Y AP
Sbjct: 115 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAP 169

Query: 584 E-WQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           E        +   D++S G +  E++  R+ F
Sbjct: 170 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 201

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 43.0 bits (101), Expect = 5e-04
 Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 9/115 (7%)

Query: 497 ADLLFNLETRPLWRDRVRIALDVARGLL----YLHDECEVQIIHCDIKLRNILIDDSWRA 552
           +DL   L  R       ++   VAR LL    Y+H E    IIH DIK  N+L++     
Sbjct: 244 SDLYTYLGARLRPLGLAQVTA-VARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDI 299

Query: 553 KISDFGLAKLLMPN-QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLE 606
            + DFG A     +  T    G+ G+    APE       T   D++S G+V+ E
Sbjct: 300 CLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFE 354

Length = 461

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 42.5 bits (100), Expect = 5e-04
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 22/145 (15%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRD----RVRIALDVARGLLYLHDE 529
           L Y  +  K L +V E+M  G L +L+ N +    W       V +ALD    + +    
Sbjct: 108 LHYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGF---- 163

Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIV--AGVRGSRGYMAPEWQN 587
                IH D+K  N+L+D S   K++DFG    +  +  G+V      G+  Y++PE   
Sbjct: 164 -----IHRDVKPDNMLLDKSGHLKLADFGTCMKM--DANGMVRCDTAVGTPDYISPEVLK 216

Query: 588 S----GLITVKSDVYSFGVVLLEII 608
           S    G    + D +S GV L E++
Sbjct: 217 SQGGDGYYGRECDWWSVGVFLYEML 241

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 42.8 bits (100), Expect = 5e-04
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 8/122 (6%)

Query: 487 VYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI 546
           +Y FM   +     F+ + RPL +    I   +   + Y+HD+   ++IH DIKL NI +
Sbjct: 249 LYSFMYDEA-----FDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFL 300

Query: 547 DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLE 606
           +   +  + DFG A      +     G  G+    +PE          +D++S G++LL+
Sbjct: 301 NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLD 360

Query: 607 II 608
           ++
Sbjct: 361 ML 362

Length = 501

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 41.9 bits (98), Expect = 6e-04
 Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 17/135 (12%)

Query: 481 SSKKLLV-YEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCD 538
           S +KL +  E+   GSL D+     T PL   ++  +  +  +GL YLH + +   +H D
Sbjct: 77  SREKLWICMEYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSKGK---MHRD 131

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR---GSRGYMAPE---WQNSGLIT 592
           IK  NIL+ D+   K++DFG+A  +    T  +A  +   G+  +MAPE    + +G   
Sbjct: 132 IKGANILLTDNGDVKLADFGVAAKI----TATIAKRKSFIGTPYWMAPEVAAVEKNGGYN 187

Query: 593 VKSDVYSFGVVLLEI 607
              D+++ G+  +E+
Sbjct: 188 QLCDIWAVGITAIEL 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 41.7 bits (98), Expect = 0.001
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 3/41 (7%)

Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL 562
           GL Y H +     +H DIK  NIL+++  + K++DFGLA+L
Sbjct: 128 GLNYCHKK---NFLHRDIKCSNILLNNKGQIKLADFGLARL 165

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 41.8 bits (98), Expect = 0.001
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ 533
           L Y  + ++ L L+ EF+  G L  +L   +T     D  R  +  A  +L +    ++ 
Sbjct: 66  LYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDT--FSEDVTRFYM--AECVLAIEAVHKLG 121

Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLA 560
            IH DIK  NILID     K+SDFGL+
Sbjct: 122 FIHRDIKPDNILIDRGGHIKLSDFGLS 148

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 41.5 bits (97), Expect = 0.001
 Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 8/134 (5%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV ++   G L  LL   E R L  D  R    +A  +L +H   ++  +H DIK  N+L
Sbjct: 78  LVMDYYVGGDLLTLLSKFEDR-LPEDMARFY--IAEMVLAIHSIHQLHYVHRDIKPDNVL 134

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-----GLITVKSDVYSF 600
           +D +   +++DFG    +  + T   +   G+  Y++PE   +     G    + D +S 
Sbjct: 135 LDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSL 194

Query: 601 GVVLLEIICCRSNF 614
           GV + E++   + F
Sbjct: 195 GVCMYEMLYGETPF 208

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 41.2 bits (96), Expect = 0.001
 Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 6/127 (4%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV E  + GS+ DL+     R    +   IA  +   L+ L      + IH D+K  NIL
Sbjct: 97  LVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNIL 156

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAP-----EWQNSGLITVKSDVYSF 600
           +      K+ DFG++  L   +      V G+  +MAP     E Q       + DV+S 
Sbjct: 157 LTTEGGVKLVDFGVSAQLTSTRLRRNTSV-GTPFWMAPEVIACEQQLDSTYDARCDVWSL 215

Query: 601 GVVLLEI 607
           G+  +E+
Sbjct: 216 GITAIEL 222

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 41.1 bits (97), Expect = 0.001
 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 15/134 (11%)

Query: 480 RSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHC 537
           R + +L LV+E M   +L +L+     RPL   RV+  +  + + L ++H      I H 
Sbjct: 70  RKTGRLALVFELMD-MNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHR 124

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQ--TGIVAGVRGSRGYMAPE-WQNSGLITVK 594
           DIK  NILI D    K++DFG  + +      T  ++    +R Y APE     G    K
Sbjct: 125 DIKPENILIKDD-ILKLADFGSCRGIYSKPPYTEYIS----TRWYRAPECLLTDGYYGPK 179

Query: 595 SDVYSFGVVLLEII 608
            D+++ G V  EI+
Sbjct: 180 MDIWAVGCVFFEIL 193

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 41.0 bits (96), Expect = 0.001
 Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 17/136 (12%)

Query: 481 SSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIA----LDVARGLLYLHDECEVQII 535
           S K+L LV+E++      DL  ++++ P +    R+       + RG+ Y H     +++
Sbjct: 72  SEKRLYLVFEYLD----LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVL 124

Query: 536 HCDIKLRNILIDDSWRA-KISDFGLAKLL-MPNQTGIVAGVRGSRGYMAPE-WQNSGLIT 592
           H D+K +N+LID    A K++DFGLA+   +P +T     V  +  Y APE    S   +
Sbjct: 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVV--TLWYRAPEILLGSRHYS 182

Query: 593 VKSDVYSFGVVLLEII 608
              D++S G +  E++
Sbjct: 183 TPVDIWSVGCIFAEMV 198

Length = 294

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 19/147 (12%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDE 529
           I  LL   +   K  ++ EF   G++  ++  L+ R L   +++ I   +   L YLH  
Sbjct: 71  IVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLH-- 127

Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLA----KLLMPNQTGIVAGVRGSRGYMAP-- 583
             ++IIH D+K  N+L+      K++DFG++    K L    + I     G+  +MAP  
Sbjct: 128 -SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFI-----GTPYWMAPEV 181

Query: 584 ---EWQNSGLITVKSDVYSFGVVLLEI 607
              E         K+D++S G+ L+E+
Sbjct: 182 VMCETMKDTPYDYKADIWSLGITLIEM 208

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 40.0 bits (93), Expect = 0.003
 Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 3/41 (7%)

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK 561
           RGL Y H   + +I+H D+K +N+LI++    K++DFGLA+
Sbjct: 114 RGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 39.6 bits (92), Expect = 0.003
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 8/111 (7%)

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL-LMPNQTGIVAGVRGSRG 579
           RGL Y+H +    I+H D+K +N+LI      K++DFGLA+   +P+QT     V  +  
Sbjct: 114 RGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVV--TLW 168

Query: 580 YMAPE-WQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW 629
           Y  P+    +   +   D++  G + +E++  +  F   VS   E L   W
Sbjct: 169 YRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFP-GVSDVFEQLEKIW 218

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 39.7 bits (93), Expect = 0.004
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV+EF     LA LL N   +    +  ++   +  GL Y+H     +I+H D+K  NIL
Sbjct: 96  LVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANIL 151

Query: 546 IDDSWRAKISDFGLAK 561
           I      K++DFGLA+
Sbjct: 152 ITKDGILKLADFGLAR 167

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	702
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.98
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.98
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.98
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.97
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.97
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.97
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.97
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.97
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.97
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.97
PHA02988	283	hypothetical protein; Provisional	99.97
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.97
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.97
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.97
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.97
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.97
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.97
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.97
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.97
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.97
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.97
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.97
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.97
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.97
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.97
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.97
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.97
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.97
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.97
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.97
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.97
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.97
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.97
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.97
PHA03212	391	serine/threonine kinase US3; Provisional	99.97
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.97
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.97
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.96
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.96
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.96
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.96
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.96
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.96
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.96
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.96
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.96
KOG0589	426	consensus Serine/threonine protein kinase [General	99.96
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.96
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.96
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.96
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.96
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.96
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.96
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.96
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.96
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.96
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.96
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.96
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.96
KOG0610	459	consensus Putative serine/threonine protein kinase	99.96
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.96
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.96
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.96
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.96
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.96
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.96
PTZ00267	478	NIMA-related protein kinase; Provisional	99.96
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.96
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.96
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.96
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.96
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.96
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.96
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.96
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.96
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.96
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.96
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.96
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.96
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.96
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.96
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.96
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.96
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.96
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.96
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.96
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.96
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.96
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.96
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.96
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.96
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.96
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.96
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.96
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.96
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.96
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.96
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.96
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.96
PTZ00284	467	protein kinase; Provisional	99.96
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.96
PTZ00283	496	serine/threonine protein kinase; Provisional	99.96
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.96
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.96
PHA03211	461	serine/threonine kinase US3; Provisional	99.96
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.96
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.96
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.96
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.96
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.96
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.96
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.96
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.96
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.96
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.96
PHA03209	357	serine/threonine kinase US3; Provisional	99.96
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.96
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.96
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.96
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.96
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.96
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.96
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.96
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.96
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.96
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.96
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.96
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.96
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.96
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.96
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.96
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.96
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.96
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.96
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.96
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.96
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.96
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.96
PTZ00036	440	glycogen synthase kinase; Provisional	99.96
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.96
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.96
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.96
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.96
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.96
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.96
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.96
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.96
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.96
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.96
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.96
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.96
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.96
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.96
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.95
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.95
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.95
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.95
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.95
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.95
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.95
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.95
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.95
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.95
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.95
PHA03207	392	serine/threonine kinase US3; Provisional	99.95
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.95
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.95
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.95
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.95
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.95
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.95
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.95
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.95
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.95
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.95
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.95
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.95
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.95
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.95
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.95
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.95
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.95
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.95
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.95
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.95
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.95
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.95
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.95
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.95
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.95
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.95
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.95
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.95
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.95
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.95
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.95
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.95
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.95
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.95
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.95
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.95
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.95
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.95
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.95
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.95
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.95
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.95
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.95
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.95
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.95
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.95
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.95
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.95
PHA02882	294	putative serine/threonine kinase; Provisional	99.95
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.95
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.95
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.95
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.95
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.95
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.95
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.95
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.95
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.95
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.95
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.95
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.95
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.95
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.95
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.95
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.95
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	99.95
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.95
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.95
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.95
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.95
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.95
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.95
KOG0584	632	consensus Serine/threonine protein kinase [General	99.95
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.95
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.95
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.95
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.95
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.95
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.95
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.95
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.95
KOG0586	596	consensus Serine/threonine protein kinase [General	99.95
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.94
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.94
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.94
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.94
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.94
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.94
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.94
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.94
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.94
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.94
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.94
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.94
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.94
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.94
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.94
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.94
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.94
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.94
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.94
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.94
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.94
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.94
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.94
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.94
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.94
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.94
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.94
PHA03210	501	serine/threonine kinase US3; Provisional	99.94
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.94
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.94
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.94
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.94
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.94
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.94
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.94
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.94
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.94
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.94
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.94
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.94
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.94
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.94
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.94
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.94
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.94
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.94
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.94
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.94
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.94
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.94
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.94
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.94
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.94
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.94
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.94
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.94
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.94
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.94
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.94
PLN00009	294	cyclin-dependent kinase A; Provisional	99.94
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.93
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.93
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.93
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.93
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.93
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.93
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.93
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.93
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.93
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.93
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.93
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.93
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.93
KOG3653	534	consensus Transforming growth factor beta/activin	99.93
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.93
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.93
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.93
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.93
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.93
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.93
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.93
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.93
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.93
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.93
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.93
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.93
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.93
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.93
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.93
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	99.93
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.92
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.92
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.92
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.92
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.92
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.92
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.92
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.92
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.92
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.92
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.92
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.92
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.92
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.92
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.92
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.91
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.91
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.91
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.91
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.91
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.91
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.91
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	99.91
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.91
PLN00181	793	protein SPA1-RELATED; Provisional	99.9
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.9
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.9
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.9
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.89
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.89
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.89
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.88
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.87
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.87
KOG1152	772	consensus Signal transduction serine/threonine kin	99.86
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.86
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.86
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.86
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	99.85
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.85
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.83
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.8
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.79
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.78
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.74
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.74
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.73
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.69
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.64
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.64
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.64
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.61
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.6
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.59
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.57
PRK09188	365	serine/threonine protein kinase; Provisional	99.55
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.52
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.45
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.44
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.42
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.41
PRK12274	218	serine/threonine protein kinase; Provisional	99.4
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.25
smart00090	237	RIO RIO-like kinase.	99.24
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.23
PRK14879	211	serine/threonine protein kinase; Provisional	99.19
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.14
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.14
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.08
PRK10345	210	hypothetical protein; Provisional	99.07
PF08276	66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.04
cd01098	84	PAN_AP_plant Plant PAN/APPLE-like domain; present	99.02
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.97
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.9
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	98.89
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.87
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	98.83
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.77
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.77
cd00129	80	PAN_APPLE PAN/APPLE-like domain; present in N-term	98.75
COG4248	637	Uncharacterized protein with protein kinase and he	98.74
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.68
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.53
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.5
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.49
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.46
KOG1243	690	consensus Protein kinase [General function predict	98.41
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.36
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.36
KOG3087	229	consensus Serine/threonine protein kinase [General	98.34
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	98.29
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.26
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.02
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.96
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.94
smart00473	78	PAN_AP divergent subfamily of APPLE domains. Apple	97.86
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.74
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	97.71
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.59
PRK09902	216	hypothetical protein; Provisional	97.51
cd01100	73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	96.87
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.79
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.69
KOG1235	538	consensus Predicted unusual protein kinase [Genera	96.57
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	96.5
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.45
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	96.3
PF01636	239	APH: Phosphotransferase enzyme family This family	95.76
KOG0576	829	consensus Mitogen-activated protein kinase kinase	95.56
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	95.56
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	95.2
KOG2268	465	consensus Serine/threonine protein kinase [Signal	94.56
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	94.53
PLN02876	822	acyl-CoA dehydrogenase	93.44
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	93.4
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	92.96
PRK10593	297	hypothetical protein; Provisional	92.72
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	91.96
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	91.21
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	89.9
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	89.46
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	89.24
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	89.21
PRK05231	319	homoserine kinase; Provisional	88.97
smart00223	79	APPLE APPLE domain. Four-fold repeat in plasma kal	88.59
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	88.06
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	86.92
KOG2270	520	consensus Serine/threonine protein kinase involved	86.74
PF14295	51	PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A.	85.41
COG2334	331	Putative homoserine kinase type II (protein kinase	84.99
PRK10271	188	thiK thiamine kinase; Provisional	84.99
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	84.24
PF00024	79	PAN_1: PAN domain This Prosite entry concerns appl	82.98
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	82.59

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-37  Score=330.86  Aligned_cols=238  Identities=37%  Similarity=0.614  Sum_probs=202.6

Q ss_pred             ccceEEEeEE--EEEeeeeh-hhhHhh---------------------------eeeEEEEEecCC-eeEEEEecCCCCC
Q 038002          447 DKRKLLTVLA--GCLGSITF-LCFLIA---------------------------ISSLLVYKHRSS-KKLLVYEFMSKGS  495 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~~-~~~avk---------------------------i~~l~~~~~~~~-~~~lV~e~~~~gs  495 (702)
                      ....||+|+|  ||+|.+.. ..||||                           +++|++|+.+++ +.+||||||++|+
T Consensus        79 ~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGs  158 (361)
T KOG1187|consen   79 ESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGS  158 (361)
T ss_pred             hhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCC
Confidence            3467888877  88888777 677777                           888999999888 5999999999999


Q ss_pred             HHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeece
Q 038002          496 LADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGV  574 (702)
Q Consensus       496 L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  574 (702)
                      |.++|+.... .++|..+++|+.++|+||+|||+.+.+.||||||||+|||+|+++++||+|||+|+....... .....
T Consensus       159 L~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~-~~~~~  237 (361)
T KOG1187|consen  159 LEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDT-SVSTT  237 (361)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcccc-ceeee
Confidence            9999998776 789999999999999999999999888899999999999999999999999999976543111 11222


Q ss_pred             -eccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc-----C
Q 038002          575 -RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV-----D  648 (702)
Q Consensus       575 -~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  648 (702)
                       .||.+|+|||++..+..+.|+|||||||+++||++|+.|.+... ...+..+..|....+..+.+.+++|+.+     .
T Consensus       238 ~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~-~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~  316 (361)
T KOG1187|consen  238 VMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSR-PRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYP  316 (361)
T ss_pred             cCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCC-CcccccHHHHHHHHHHCcchhheeCCCccCCCCC
Confidence             79999999999999999999999999999999999999887653 2334447788888888888888888742     2


Q ss_pred             H-HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCC
Q 038002          649 K-ITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEI  686 (702)
Q Consensus       649 ~-~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~  686 (702)
                      . ....++..++.+|++.+|.+||+|.||+++|+.+...
T Consensus       317 ~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~  355 (361)
T KOG1187|consen  317 DEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL  355 (361)
T ss_pred             hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence            2 5788899999999999999999999999999766544

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-37  Score=312.20  Aligned_cols=194  Identities=28%  Similarity=0.395  Sum_probs=161.2

Q ss_pred             eeeEEEEEecCC-eeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHRSS-KKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~  548 (702)
                      |+.+++.|..+. .+.|+||||++|||++++...+ ++++....+|+.+|++||.|||+ +   +||||||||+|||++.
T Consensus       139 IV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNs  214 (364)
T KOG0581|consen  139 IVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVG-RIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNS  214 (364)
T ss_pred             eeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeecc
Confidence            899998888888 5999999999999999998774 79999999999999999999996 6   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      .|.+||+|||.+..+...   ....+.||..|||||.+.+..|+.++||||||++++|+.+|+.|+.........  ..+
T Consensus       215 kGeVKicDFGVS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~--~~~  289 (364)
T KOG0581|consen  215 KGEVKICDFGVSGILVNS---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLD--IFE  289 (364)
T ss_pred             CCCEEeccccccHHhhhh---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCC--HHH
Confidence            999999999999877544   346688999999999999999999999999999999999999999764111111  111


Q ss_pred             HHHHhhhccccccccccccCH-HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEEEVDK-ITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                       ....+..+.-     +.++. ..++++.+++..||++||.+||+++|+++.
T Consensus       290 -Ll~~Iv~~pp-----P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  290 -LLCAIVDEPP-----PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             -HHHHHhcCCC-----CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence             1111122111     12333 478899999999999999999999999863

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.7e-37  Score=326.59  Aligned_cols=217  Identities=24%  Similarity=0.292  Sum_probs=184.9

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      ..+++.+.||+|+|  +|.+....  ..||+|                              |++++.+|++.++.|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            45677889999999  88888743  778877                              999999999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      |+|+.++|.++++. +..+++.+++.+++||+.||.|||++   +|+|||||..|++++++.++||+|||+|..+..+. 
T Consensus        98 ELC~~~sL~el~Kr-rk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~-  172 (592)
T KOG0575|consen   98 ELCHRGSLMELLKR-RKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG-  172 (592)
T ss_pred             EecCCccHHHHHHh-cCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCcc-
Confidence            99999999999984 44899999999999999999999999   99999999999999999999999999999885443 


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                      +...+.+|||.|+|||++.....+..+||||+|||+|.||.|++||+...-        +-.+..++..+      -..+
T Consensus       173 Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v--------kety~~Ik~~~------Y~~P  238 (592)
T KOG0575|consen  173 ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV--------KETYNKIKLNE------YSMP  238 (592)
T ss_pred             cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH--------HHHHHHHHhcC------cccc
Confidence            335568999999999999999999999999999999999999999975411        11222222211      1234


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ...+....+||.++|+.||.+|||+++|+.
T Consensus       239 ~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  239 SHLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             cccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            456778889999999999999999999996

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.2e-37  Score=311.69  Aligned_cols=223  Identities=22%  Similarity=0.219  Sum_probs=179.2

Q ss_pred             CcccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------------eeeEEEEEecCC
Q 038002          441 GNDKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------------ISSLLVYKHRSS  482 (702)
Q Consensus       441 ~~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------------i~~l~~~~~~~~  482 (702)
                      +++.+...+.+|.|+|  |-++..+.  ..||||                                  |+++.++|+..+
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d  249 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD  249 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence            4555556677888877  44444433  566766                                  999999999999


Q ss_pred             eeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC---CcEEEecccc
Q 038002          483 KKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS---WRAKISDFGL  559 (702)
Q Consensus       483 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~---~~~kl~Dfg~  559 (702)
                      ..|+||||++||+|.+++...+ .+.+..-..++.|++.|+.|||++   ||+||||||+|||+..+   -.+||+|||+
T Consensus       250 s~YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGl  325 (475)
T KOG0615|consen  250 SSYMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGL  325 (475)
T ss_pred             ceEEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccch
Confidence            9999999999999999998765 677888889999999999999999   99999999999999665   6799999999


Q ss_pred             eeecCCCCCceeeceeccccccCcccccCCC---CCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhc
Q 038002          560 AKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL---ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVA  636 (702)
Q Consensus       560 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~  636 (702)
                      |+...  ....+.+.+|||.|.|||++.++.   +..++||||+||+||-+++|.+||.......   .    ..+++..
T Consensus       326 AK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~---s----l~eQI~~  396 (475)
T KOG0615|consen  326 AKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP---S----LKEQILK  396 (475)
T ss_pred             hhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc---c----HHHHHhc
Confidence            99875  344577899999999999997653   3358899999999999999999997542221   0    1222333


Q ss_pred             cccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          637 GEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       637 ~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      +..  .+.+......+++.+++|.+||+.||++|||++|+++
T Consensus       397 G~y--~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  397 GRY--AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             Ccc--cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            332  2233445678899999999999999999999999886

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=8e-36  Score=303.04  Aligned_cols=168  Identities=28%  Similarity=0.359  Sum_probs=151.7

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      .+...++||.|+|  ||+|..+.  ..||||                             |+.++++.+.++.+||||||
T Consensus        11 ~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEy   90 (429)
T KOG0595|consen   11 DYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEY   90 (429)
T ss_pred             cceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEe
Confidence            4455566999999  99999876  778887                             99999999999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC------CcEEEecccceeecC
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS------WRAKISDFGLAKLLM  564 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~------~~~kl~Dfg~a~~~~  564 (702)
                      |+||+|.++|+..+ ++++..+..++.||+.||++||++   +||||||||+|||++..      -.+||+|||+|+.+.
T Consensus        91 C~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~  166 (429)
T KOG0595|consen   91 CNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ  166 (429)
T ss_pred             CCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence            99999999998876 899999999999999999999999   99999999999999664      568999999999875


Q ss_pred             CCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCC
Q 038002          565 PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVN  617 (702)
Q Consensus       565 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~  617 (702)
                      .  .....+.+|++.|||||++....|+.|+|+||+|+|+|++++|+.||+..
T Consensus       167 ~--~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~  217 (429)
T KOG0595|consen  167 P--GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE  217 (429)
T ss_pred             c--hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence            3  33356789999999999999999999999999999999999999999754

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-35  Score=307.55  Aligned_cols=218  Identities=23%  Similarity=0.266  Sum_probs=181.6

Q ss_pred             ccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------------eeeEEEEEecCCeeEEEEe
Q 038002          445 VNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      ++-.+.+|+|++  |+++....  ..+|||                               |++|+..|+++..+|+|+|
T Consensus        75 F~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe  154 (604)
T KOG0592|consen   75 FKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLE  154 (604)
T ss_pred             cchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEE
Confidence            344568888888  88877654  677776                               9999999999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      |+++|+|.++|.+.+ .+++..++.++.||+.||+|||++   |||||||||||||+|+++++||+|||.|+.+......
T Consensus       155 ~A~nGdll~~i~K~G-sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~  230 (604)
T KOG0592|consen  155 YAPNGDLLDLIKKYG-SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKS  230 (604)
T ss_pred             ecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCChhhcc
Confidence            999999999999886 899999999999999999999999   9999999999999999999999999999987543211


Q ss_pred             ------------eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcc
Q 038002          570 ------------IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAG  637 (702)
Q Consensus       570 ------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  637 (702)
                                  ....++||..|.+||++.....+..+|||+||||||+|+.|.+||...   .+...+...     .. 
T Consensus       231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~---NeyliFqkI-----~~-  301 (604)
T KOG0592|consen  231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA---NEYLIFQKI-----QA-  301 (604)
T ss_pred             ccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc---cHHHHHHHH-----HH-
Confidence                        114588999999999999999999999999999999999999999644   111111111     10 


Q ss_pred             ccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038002          638 EFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML  680 (702)
Q Consensus       638 ~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  680 (702)
                           ++-++++..++.+.+|+.+.|..||.+|+|.++|.+..
T Consensus       302 -----l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp  339 (604)
T KOG0592|consen  302 -----LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP  339 (604)
T ss_pred             -----hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence                 11234445567888999999999999999999998754

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-35  Score=312.33  Aligned_cols=220  Identities=32%  Similarity=0.400  Sum_probs=177.4

Q ss_pred             eEEEeEE--EEEeeeehhh-hHhh-----------------------------eeeEEEEEecCC-eeEEEEecCCCCCH
Q 038002          450 KLLTVLA--GCLGSITFLC-FLIA-----------------------------ISSLLVYKHRSS-KKLLVYEFMSKGSL  496 (702)
Q Consensus       450 ~l~~g~~--v~~~~~~~~~-~avk-----------------------------i~~l~~~~~~~~-~~~lV~e~~~~gsL  496 (702)
                      .+|.|++  ||++...... ||||                             |+++++...+.. ...|||||+++|+|
T Consensus        48 ~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL  127 (362)
T KOG0192|consen   48 VLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSL  127 (362)
T ss_pred             hcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcH
Confidence            3666666  7777766644 6665                             777888888877 79999999999999


Q ss_pred             HHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCC-eEecCCCCCcEEEeCCC-cEEEecccceeecCCCCCceeec
Q 038002          497 ADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQ-IIHCDIKLRNILIDDSW-RAKISDFGLAKLLMPNQTGIVAG  573 (702)
Q Consensus       497 ~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~-ivH~dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~~~~~~~  573 (702)
                      .+++... ...+++..++.++.||++||.|||++   + ||||||||+|||++.++ ++||+|||+++...... ...+.
T Consensus       128 ~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-~~~~~  203 (362)
T KOG0192|consen  128 SVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-TSMTS  203 (362)
T ss_pred             HHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc-ccccC
Confidence            9999883 55799999999999999999999999   8 99999999999999997 99999999998764332 23344


Q ss_pred             eeccccccCccccc--CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHH
Q 038002          574 VRGSRGYMAPEWQN--SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT  651 (702)
Q Consensus       574 ~~gt~~y~aPE~~~--~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  651 (702)
                      ..||+.|||||++.  ...++.|+|||||||++|||+||+.||.....    ...   .......+     ..+.++...
T Consensus       204 ~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~----~~~---~~~v~~~~-----~Rp~~p~~~  271 (362)
T KOG0192|consen  204 VAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP----VQV---ASAVVVGG-----LRPPIPKEC  271 (362)
T ss_pred             CCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH----HHH---HHHHHhcC-----CCCCCCccC
Confidence            67999999999999  56999999999999999999999999975521    111   11111111     122333346


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          652 LERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       652 ~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ...+..++.+||+.||++||++.+++.+|+.+..
T Consensus       272 ~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  272 PPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             CHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence            7788999999999999999999999999997543

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-35  Score=294.27  Aligned_cols=212  Identities=21%  Similarity=0.215  Sum_probs=174.4

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      .+.++..+.||+|+|  |+......  ..+|+|                              |+.+...||+++++|||
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            355666789999998  77766554  667776                              89999999999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      +||+.||.|..+|.+.+ .+++..+.-++.+|+.||.|||+.   |||||||||+|||+|++|+++|+|||+++......
T Consensus       104 ld~~~GGeLf~hL~~eg-~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~  179 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREG-RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG  179 (357)
T ss_pred             EeccCCccHHHHHHhcC-CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcccCC
Confidence            99999999999998776 899999999999999999999999   99999999999999999999999999999653332


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                       ....+++||+.|||||++.+..|+.++|+||||+++|||++|.+||.......        .++.+..+..     ...
T Consensus       180 -~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~--------~~~~I~~~k~-----~~~  245 (357)
T KOG0598|consen  180 -DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK--------MYDKILKGKL-----PLP  245 (357)
T ss_pred             -CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH--------HHHHHhcCcC-----CCC
Confidence             23455899999999999999999999999999999999999999997552111        1122222221     112


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCC
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRP  671 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RP  671 (702)
                      +.-.+.+.++++.++|+.||++|.
T Consensus       246 p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  246 PGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             CccCCHHHHHHHHHHhccCHHHhc
Confidence            223566788899999999999995

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-34  Score=303.11  Aligned_cols=225  Identities=27%  Similarity=0.324  Sum_probs=185.0

Q ss_pred             cccceEEEeEE--EEEeeeeh-hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCCCCH
Q 038002          446 NDKRKLLTVLA--GCLGSITF-LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSKGSL  496 (702)
Q Consensus       446 ~~~~~l~~g~~--v~~~~~~~-~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~gsL  496 (702)
                      +..++||+|-|  |+.|.... ..||+|                          |+++++....++.+|||||||+.|+|
T Consensus       209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL  288 (468)
T KOG0197|consen  209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL  288 (468)
T ss_pred             HHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence            34567888887  88888777 477776                          99999999998999999999999999


Q ss_pred             HHHhhc-CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeecee
Q 038002          497 ADLLFN-LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR  575 (702)
Q Consensus       497 ~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  575 (702)
                      .++|+. .+..+...+.+.++.||++|++||+++   ++|||||...||||+++..+||+|||+|+....+.........
T Consensus       289 l~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~k  365 (468)
T KOG0197|consen  289 LDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGK  365 (468)
T ss_pred             HHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCC
Confidence            999997 455789999999999999999999999   9999999999999999999999999999966555443444444


Q ss_pred             ccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHH
Q 038002          576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLER  654 (702)
Q Consensus       576 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  654 (702)
                      -+..|.|||.+....++.|+|||||||+||||+| |+.|+..... .      + +.+.+.++..     -..+...++.
T Consensus       366 fPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn-~------e-v~~~le~GyR-----lp~P~~CP~~  432 (468)
T KOG0197|consen  366 FPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN-E------E-VLELLERGYR-----LPRPEGCPDE  432 (468)
T ss_pred             CCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH-H------H-HHHHHhccCc-----CCCCCCCCHH
Confidence            5678999999999999999999999999999998 8888865411 1      1 1122222211     1234556788


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHHHHhCCcCC
Q 038002          655 MVKTGLLCIQDEPNLRPSMKNVILMLEGTMEI  686 (702)
Q Consensus       655 l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~  686 (702)
                      +.++|..||+.+|++|||++.+...|+.....
T Consensus       433 vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  433 VYELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             HHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence            99999999999999999999999999886543

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-33  Score=275.05  Aligned_cols=206  Identities=22%  Similarity=0.220  Sum_probs=173.3

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +.+...+.+|.|+|  |.+.....  ..+|+|                              ++++...+++.+.+|+||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            44556778888888  66555443  455555                              788889999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||++||.|..++++.+ ++++..++-++.||+.||+|||+.   +|++|||||||||+|.+|.+||+|||+|+....   
T Consensus       124 eyv~GGElFS~Lrk~~-rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~---  196 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKSG-RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG---  196 (355)
T ss_pred             eccCCccHHHHHHhcC-CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC---
Confidence            9999999999998876 899999999999999999999999   999999999999999999999999999997633   


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                       ...+.+|||.|+|||+++.+.+..++|.|||||++|||+.|.+||.....        ...++.+.++.+      ..+
T Consensus       197 -rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------~~iY~KI~~~~v------~fP  261 (355)
T KOG0616|consen  197 -RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------IQIYEKILEGKV------KFP  261 (355)
T ss_pred             -cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------HHHHHHHHhCcc------cCC
Confidence             24568899999999999999999999999999999999999999976522        124444444443      234


Q ss_pred             HHHHHHHHHHHHHcccCCCCCC
Q 038002          649 KITLERMVKTGLLCIQDEPNLR  670 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~R  670 (702)
                      .-....+.+|+...|+.|-.+|
T Consensus       262 ~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  262 SYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             cccCHHHHHHHHHHHhhhhHhh
Confidence            4556688889999999999999

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-34  Score=295.93  Aligned_cols=233  Identities=21%  Similarity=0.201  Sum_probs=183.2

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCC-eeEEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSS-KKLLV  487 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~-~~~lV  487 (702)
                      -+.|...+++|.|.|  |+++....  ..||||                             |++|.+.+.+.+ .+|+|
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            355667789999998  88888655  778988                             888887777766 99999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      ||||+. +|.+++++.+..+++.++..|+.||++||+|+|++   |+.|||+||||||+..+..+||+|||+|+.+....
T Consensus        89 fE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp  164 (538)
T KOG0661|consen   89 FEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRSKP  164 (538)
T ss_pred             HHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccccCC
Confidence            999976 99999999877799999999999999999999999   99999999999999999999999999999875544


Q ss_pred             CceeeceeccccccCcccc-cCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHH-------------Hh
Q 038002          568 TGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVY-------------NC  633 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~-------------~~  633 (702)
                      .  .+..+.|+.|+|||++ +...|+.+.|||++|||++|+.+-++.|.+..+.++...+-+.+.             ..
T Consensus       165 P--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~  242 (538)
T KOG0661|consen  165 P--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLAS  242 (538)
T ss_pred             C--cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHH
Confidence            3  4566789999999966 567899999999999999999999999976532222111111110             00


Q ss_pred             hhcccccccccc---ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038002          634 FVAGEFNKLVEE---EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML  680 (702)
Q Consensus       634 ~~~~~~~~~~~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  680 (702)
                      ...-.++.....   .+-+..+.++.++|.+|+++||++|||++|++++-
T Consensus       243 ~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p  292 (538)
T KOG0661|consen  243 AMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP  292 (538)
T ss_pred             HhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence            000011111111   22233788899999999999999999999999853

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-33  Score=298.62  Aligned_cols=219  Identities=24%  Similarity=0.283  Sum_probs=177.8

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      .++....++|+|..  ||.+....  ..||||                           |+.++..|..++++++|||||
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym  352 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM  352 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence            45556677888876  77776554  667776                           666666666689999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCcee
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIV  571 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~  571 (702)
                      +||+|.|.+...  .+++.++..|++++++||+|||.+   ||+|||||.+|||+..+|.+||+|||++..+..... ..
T Consensus       353 ~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-KR  426 (550)
T KOG0578|consen  353 EGGSLTDVVTKT--RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-KR  426 (550)
T ss_pred             CCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccC-cc
Confidence            999999999654  599999999999999999999999   999999999999999999999999999998866554 34


Q ss_pred             eceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHH
Q 038002          572 AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT  651 (702)
Q Consensus       572 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  651 (702)
                      ....|||.|||||++....|++|+||||||++++||+-|++||-....     ...  .+.....+. ..+   ..+...
T Consensus       427 ~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P-----lrA--lyLIa~ng~-P~l---k~~~kl  495 (550)
T KOG0578|consen  427 STMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP-----LRA--LYLIATNGT-PKL---KNPEKL  495 (550)
T ss_pred             ccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh-----HHH--HHHHhhcCC-CCc---CCcccc
Confidence            567899999999999999999999999999999999999999964311     111  111111111 111   224456


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          652 LERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       652 ~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      +..+.+++.+||+.|+++||++.|||+
T Consensus       496 S~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  496 SPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             CHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence            788999999999999999999999997

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.2e-34  Score=278.29  Aligned_cols=226  Identities=19%  Similarity=0.252  Sum_probs=177.8

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEE-EEecCCe-eEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLV-YKHRSSK-KLLV  487 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~-~~~~~~~-~~lV  487 (702)
                      ..++..++||+|.|  ||++....  ..+|.|                             |++++. -+.++.. ++||
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            34556788999999  88877654  667766                             666664 4444444 9999


Q ss_pred             EecCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHhhhhcCCC-CeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          488 YEFMSKGSLADLLFN---LETRPLWRDRVRIALDVARGLLYLHDECEV-QIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~-~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                      ||+|..|+|...++.   .+..+++..+++++.|++.||.++|..... -|+||||||.||+++.+|.+||+|||+++.+
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            999999999999864   344699999999999999999999994221 3999999999999999999999999999988


Q ss_pred             CCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccc
Q 038002          564 MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV  643 (702)
Q Consensus       564 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  643 (702)
                      .... .......|||.||+||.+....|+.|+||||+||++|||+.-++||...    ....    ....+..++.+.+.
T Consensus       179 ~s~~-tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~----n~~~----L~~KI~qgd~~~~p  249 (375)
T KOG0591|consen  179 SSKT-TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD----NLLS----LCKKIEQGDYPPLP  249 (375)
T ss_pred             cchh-HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc----cHHH----HHHHHHcCCCCCCc
Confidence            5443 3455688999999999999999999999999999999999999999765    1111    22333444433221


Q ss_pred             ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          644 EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       644 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                          ....+..+..+|..|+..||+.||+.-.++..+.
T Consensus       250 ----~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~  283 (375)
T KOG0591|consen  250 ----DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ  283 (375)
T ss_pred             ----HHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence                2467888889999999999999998555555443

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.5e-33  Score=296.86  Aligned_cols=198  Identities=25%  Similarity=0.334  Sum_probs=167.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |.++++.+++.+++|||.||+++|.|.+++...+ ++++.++++++.||+.|+.|+|..   +|+||||||+|+|+|.++
T Consensus        74 Vl~LydVwe~~~~lylvlEyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~  149 (786)
T KOG0588|consen   74 VLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKN  149 (786)
T ss_pred             eeeeeeeeccCceEEEEEEecCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhccc
Confidence            8899999999999999999999999999998876 899999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCC-ccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT-VKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      ++||+|||+|.+-..  .....+.+|+|.|.+||++.+.+|. .++||||.|||||.||+|+.||+..       ++. .
T Consensus       150 nIKIADFGMAsLe~~--gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-------Nir-~  219 (786)
T KOG0588|consen  150 NIKIADFGMASLEVP--GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-------NIR-V  219 (786)
T ss_pred             CEeeeccceeecccC--CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-------cHH-H
Confidence            999999999987533  3345677999999999999998875 7999999999999999999999733       111 1


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhCCcCCCC
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM--LEGTMEIPI  688 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~--Le~~~~~~~  688 (702)
                      +......|.+      +.+...+.++.+|+.+||..||++|.|++||++.  |.+-..++.
T Consensus       220 LLlKV~~G~f------~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~  274 (786)
T KOG0588|consen  220 LLLKVQRGVF------EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPS  274 (786)
T ss_pred             HHHHHHcCcc------cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCCh
Confidence            2333344433      3345667789999999999999999999999984  455444443

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-33  Score=286.49  Aligned_cols=220  Identities=23%  Similarity=0.301  Sum_probs=170.3

Q ss_pred             cceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCC--eeEEEEecCCCC
Q 038002          448 KRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSS--KKLLVYEFMSKG  494 (702)
Q Consensus       448 ~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~--~~~lV~e~~~~g  494 (702)
                      .+.+|+|.+  |+++....  ...|||                           |+++++......  .+++.|||+++|
T Consensus        22 ~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~G  101 (313)
T KOG0198|consen   22 GKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGG  101 (313)
T ss_pred             hccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCC
Confidence            356777776  77776654  555555                           566665433333  799999999999


Q ss_pred             CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC-CCcEEEecccceeecCC--CCCcee
Q 038002          495 SLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD-SWRAKISDFGLAKLLMP--NQTGIV  571 (702)
Q Consensus       495 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Dfg~a~~~~~--~~~~~~  571 (702)
                      +|.+++.+.+.++++..+..+.+||++||+|||++   ||+||||||+|||++. ++.+||+|||++.....  ......
T Consensus       102 sL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~  178 (313)
T KOG0198|consen  102 SLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSE  178 (313)
T ss_pred             cHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccccccccccccc
Confidence            99999998766799999999999999999999999   9999999999999999 79999999999987653  222233


Q ss_pred             eceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHH
Q 038002          572 AGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI  650 (702)
Q Consensus       572 ~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  650 (702)
                      ....||+.|||||++..+ ....++|||||||++.||+||..||....      ...............     +.++..
T Consensus       179 ~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~------~~~~~~~~ig~~~~~-----P~ip~~  247 (313)
T KOG0198|consen  179 LSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF------EEAEALLLIGREDSL-----PEIPDS  247 (313)
T ss_pred             ccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc------chHHHHHHHhccCCC-----CCCCcc
Confidence            457899999999999853 33459999999999999999999997530      011111111122211     245556


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          651 TLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       651 ~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                      .+....+++.+|++.||++|||++++++..-
T Consensus       248 ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf  278 (313)
T KOG0198|consen  248 LSDEAKDFLRKCFKRDPEKRPTAEELLEHPF  278 (313)
T ss_pred             cCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence            7788999999999999999999999998653

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-32  Score=294.16  Aligned_cols=189  Identities=26%  Similarity=0.386  Sum_probs=159.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC-
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS-  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~-  549 (702)
                      |++++.+++...+.|+||||+.||+|.+++.+ ..++.+.++..+++|++.|++|+|++   ||+||||||+|||++.+ 
T Consensus        82 I~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~  157 (370)
T KOG0583|consen   82 IIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNE  157 (370)
T ss_pred             EeEEEEEEecCCeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCC
Confidence            89999999999999999999999999999998 55899999999999999999999999   99999999999999999 


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCC-CC-ccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL-IT-VKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      +++||+|||++.... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+...    ...  
T Consensus       158 ~~~Kl~DFG~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~----~~~--  230 (370)
T KOG0583|consen  158 GNLKLSDFGLSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN----VPN--  230 (370)
T ss_pred             CCEEEeccccccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc----HHH--
Confidence            999999999999874 3334466789999999999998876 75 78999999999999999999997531    111  


Q ss_pred             HHHHHhhhccccccccccccCHHH-HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKIT-LERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                        .+..+..+..      .++... +..+..++.+||+.||.+|+++.++++
T Consensus       231 --l~~ki~~~~~------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  231 --LYRKIRKGEF------KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             --HHHHHhcCCc------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence              1111222221      122223 788999999999999999999999993

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=5.2e-33  Score=291.29  Aligned_cols=223  Identities=17%  Similarity=0.140  Sum_probs=177.9

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      .+.+..-+.||+|+|  |+++..+.  ..+|+|                              |++|+..|++.+.+|||
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi  219 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI  219 (550)
T ss_pred             cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence            345566689999999  88888765  677877                              99999999999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCC-
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN-  566 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-  566 (702)
                      |||++||++..+|.+.+ .+++..+..++.+++.|++.||+.   |+|||||||+|+|||..|++||+|||++.-+... 
T Consensus       220 MEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~  295 (550)
T KOG0605|consen  220 MEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH  295 (550)
T ss_pred             EEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhhhh
Confidence            99999999999998776 799999999999999999999999   9999999999999999999999999999633110 


Q ss_pred             -------------------C--Cc-----ee-------------------eceeccccccCcccccCCCCCccccccchh
Q 038002          567 -------------------Q--TG-----IV-------------------AGVRGSRGYMAPEWQNSGLITVKSDVYSFG  601 (702)
Q Consensus       567 -------------------~--~~-----~~-------------------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  601 (702)
                                         .  ..     ..                   ....|||.|+|||++.+..|+..+|+||||
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG  375 (550)
T KOG0605|consen  296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG  375 (550)
T ss_pred             hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence                               0  00     00                   124599999999999999999999999999


Q ss_pred             HhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 038002          602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPS---MKNVIL  678 (702)
Q Consensus       602 vil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt---~~evl~  678 (702)
                      ||+||||.|.+||......+.-..+..|....          ........+.+..+||.+||. ||++|.-   ++||-+
T Consensus       376 ~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l----------~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~  444 (550)
T KOG0605|consen  376 CIMYEMLVGYPPFCSETPQETYRKIVNWRETL----------KFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK  444 (550)
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhc----------cCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence            99999999999998764333222333322111          111122334788999999999 9999975   666655


Q ss_pred             H
Q 038002          679 M  679 (702)
Q Consensus       679 ~  679 (702)
                      +
T Consensus       445 H  445 (550)
T KOG0605|consen  445 H  445 (550)
T ss_pred             C
Confidence            3

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.98  E-value=1.8e-33  Score=274.49  Aligned_cols=229  Identities=19%  Similarity=0.186  Sum_probs=174.7

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      ++..-.++|+|+.  |++...+.  +.||||                             ++.|++.|+...+.+||+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            4455567888876  66655443  667776                             67777888889999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      |+. ++.+-|......++.+.+.+++.|+++|+.|+|++   ++|||||||||||++.++.+||+|||+|+.+.. ....
T Consensus        83 ~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pgd~  157 (396)
T KOG0593|consen   83 CDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PGDN  157 (396)
T ss_pred             cch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC-Ccch
Confidence            977 66666777777899999999999999999999999   999999999999999999999999999998854 3445


Q ss_pred             eeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHH--------hhhc-cccc
Q 038002          571 VAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYN--------CFVA-GEFN  640 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~--------~~~~-~~~~  640 (702)
                      .+....|..|+|||.+.+ .+|...+||||+||++.||++|.+.|.+.. .-++.........        .+.. +.+.
T Consensus       158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~S-DiDQLy~I~ktLG~L~prhq~iF~~N~~F~  236 (396)
T KOG0593|consen  158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRS-DIDQLYLIRKTLGNLIPRHQSIFSSNPFFH  236 (396)
T ss_pred             hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcc-hHHHHHHHHHHHcccCHHHHHHhccCCcee
Confidence            667778999999998876 689999999999999999999999997663 2222221111111        0000 1111


Q ss_pred             ccccc---------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          641 KLVEE---------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       641 ~~~~~---------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .+.-+         .--+..+.-++++++.||+.||++|++-+|++.
T Consensus       237 Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  237 GVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             eeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            11111         112334567899999999999999999999874

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.98  E-value=6e-33  Score=289.73  Aligned_cols=217  Identities=27%  Similarity=0.292  Sum_probs=183.8

Q ss_pred             ceEEEeEE--EEEeeeehhhhHhh--------------------eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCC
Q 038002          449 RKLLTVLA--GCLGSITFLCFLIA--------------------ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR  506 (702)
Q Consensus       449 ~~l~~g~~--v~~~~~~~~~~avk--------------------i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~  506 (702)
                      .-+|.|+.  ||+|.+..+.||||                    |+.+.+.+-...-++||||||..|-|...|+... .
T Consensus       130 eWlGSGaQGAVF~Grl~netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~-~  208 (904)
T KOG4721|consen  130 EWLGSGAQGAVFLGRLHNETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGR-P  208 (904)
T ss_pred             hhhccCcccceeeeeccCceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccC-c
Confidence            35677765  99999999999998                    8899999999999999999999999999998765 7


Q ss_pred             CCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccc
Q 038002          507 PLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQ  586 (702)
Q Consensus       507 ~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~  586 (702)
                      +.......|..+|+.|+.|||.+   .|||||||.-||||..+..+||+|||-++.....  .....+.||..|||||++
T Consensus       209 itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSFaGTVaWMAPEvI  283 (904)
T KOG4721|consen  209 ITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSFAGTVAWMAPEVI  283 (904)
T ss_pred             cCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhhhhhHhhhCHHHh
Confidence            88888899999999999999999   9999999999999999999999999998865433  334568899999999999


Q ss_pred             cCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCC
Q 038002          587 NSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDE  666 (702)
Q Consensus       587 ~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~d  666 (702)
                      ++.+.++|+|||||||+|||||||+.||.......            ++-+.-...+.-.++...++-+.-|+++||+-.
T Consensus       284 rnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA------------IIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sK  351 (904)
T KOG4721|consen  284 RNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA------------IIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSK  351 (904)
T ss_pred             hcCCcccccceehhHHHHHHHHhcCCCccccchhe------------eEEeccCCcccccCcccCchHHHHHHHHHHhcC
Confidence            99999999999999999999999999996432211            111111122222455667778888999999999


Q ss_pred             CCCCCCHHHHHHHHhCC
Q 038002          667 PNLRPSMKNVILMLEGT  683 (702)
Q Consensus       667 P~~RPt~~evl~~Le~~  683 (702)
                      |..||++.+++..|+=.
T Consensus       352 pRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  352 PRNRPSFRQILLHLDIA  368 (904)
T ss_pred             CCCCccHHHHHHHHhhc
Confidence            99999999999999743

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=5.3e-32  Score=277.18  Aligned_cols=227  Identities=24%  Similarity=0.287  Sum_probs=181.0

Q ss_pred             CcccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCCeeEEEE
Q 038002          441 GNDKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       441 ~~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      ..+.++-...||.|..  ||++....  ..||||                            |+.++..|-.+..+|+||
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm  103 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM  103 (516)
T ss_pred             CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence            3455666678888866  88887654  788888                            888889999999999999


Q ss_pred             ecCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          489 EFMSKGSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       489 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      .||.+||+.++++.. ...+++..+..|++++++||.|||.+   |.||||||+.||||+.+|.+||+|||.+..+....
T Consensus       104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G  180 (516)
T KOG0582|consen  104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG  180 (516)
T ss_pred             hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence            999999999999865 34689999999999999999999999   99999999999999999999999999987665443


Q ss_pred             Ccee---eceeccccccCcccccC--CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccc--
Q 038002          568 TGIV---AGVRGSRGYMAPEWQNS--GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFN--  640 (702)
Q Consensus       568 ~~~~---~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~--  640 (702)
                      ....   ..+.||+.|||||++..  ..|+.|+||||||++..||.+|..||.....  -+..+.+      ..+..+  
T Consensus       181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP--mkvLl~t------Lqn~pp~~  252 (516)
T KOG0582|consen  181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP--MKVLLLT------LQNDPPTL  252 (516)
T ss_pred             ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh--HHHHHHH------hcCCCCCc
Confidence            2221   45789999999998543  4789999999999999999999999975411  1111111      111111  


Q ss_pred             --cccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          641 --KLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       641 --~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                        ...+.+........+.+++..||+.||.+|||++++++
T Consensus       253 ~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  253 LTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             ccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence              12223344555668889999999999999999999987

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=5.5e-32  Score=281.05  Aligned_cols=233  Identities=19%  Similarity=0.178  Sum_probs=179.6

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEE--ecCCeeEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYK--HRSSKKLL  486 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~--~~~~~~~l  486 (702)
                      .+.+....+||+|.+  ||++....  ..||+|                             |++|.+.-  .....+||
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl  195 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL  195 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence            345566778999988  99888765  668877                             66666332  23689999


Q ss_pred             EEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCC
Q 038002          487 VYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  566 (702)
                      |+|||+. +|.-++....-++++.++..++.||+.||+|+|.+   ||+|||||.+|||||.+|.+||+|||+|+++...
T Consensus       196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~  271 (560)
T KOG0600|consen  196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS  271 (560)
T ss_pred             EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence            9999977 99999988877899999999999999999999999   9999999999999999999999999999998877


Q ss_pred             CCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH----HHhhhccccc-
Q 038002          567 QTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV----YNCFVAGEFN-  640 (702)
Q Consensus       567 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~----~~~~~~~~~~-  640 (702)
                      .....+..+-|..|+|||.+.+ ..|+.++|+||.||||.||+.|++.|......++-..+.+.-    ...|....++ 
T Consensus       272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~  351 (560)
T KOG0600|consen  272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPH  351 (560)
T ss_pred             CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCc
Confidence            7766777888999999998766 489999999999999999999999998663222111111000    0001111111 


Q ss_pred             -ccccc---------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          641 -KLVEE---------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       641 -~~~~~---------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       ..+.+         +.-.......++|+..+|..||.+|.|+.++++
T Consensus       352 ~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  352 ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence             11111         112233556788899999999999999999875

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.97  E-value=8.6e-32  Score=288.38  Aligned_cols=199  Identities=26%  Similarity=0.376  Sum_probs=153.4

Q ss_pred             eeeEEEEEec-CCeeEEEEecCCCCCHHHHhhcCC---------------------------------------------
Q 038002          471 ISSLLVYKHR-SSKKLLVYEFMSKGSLADLLFNLE---------------------------------------------  504 (702)
Q Consensus       471 i~~l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~---------------------------------------------  504 (702)
                      |+++++.+.. ++..++||||+++|+|.+++....                                             
T Consensus        73 iv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (338)
T cd05102          73 VVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPS  152 (338)
T ss_pred             eeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccc
Confidence            5666665544 456899999999999999997532                                             


Q ss_pred             ----------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          505 ----------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       505 ----------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                                      ..+++.++..++.||++||+|||++   +|+||||||+|||++.++.+||+|||+++.......
T Consensus       153 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~  229 (338)
T cd05102         153 TSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD  229 (338)
T ss_pred             cCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcc
Confidence                            1366788899999999999999999   999999999999999999999999999986543322


Q ss_pred             c-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          569 G-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       569 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                      . ......+++.|+|||.+.+..++.++||||||+++|||++ |..||.......  .     .......+...     .
T Consensus       230 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~--~-----~~~~~~~~~~~-----~  297 (338)
T cd05102         230 YVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE--E-----FCQRLKDGTRM-----R  297 (338)
T ss_pred             hhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH--H-----HHHHHhcCCCC-----C
Confidence            1 1223345678999999988899999999999999999997 999997542211  1     11111111111     1


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .+...+..+.+++.+||+.||++|||+.||+++|+.+.
T Consensus       298 ~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~  335 (338)
T cd05102         298 APENATPEIYRIMLACWQGDPKERPTFSALVEILGDLL  335 (338)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            12234567889999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.97  E-value=7.8e-32  Score=259.13  Aligned_cols=230  Identities=20%  Similarity=0.164  Sum_probs=180.1

Q ss_pred             ccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          445 VNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      +...+++|+|.+  ||+|....  +.||||                             |+.|.+.|...+..-||+|||
T Consensus         4 Y~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm   83 (318)
T KOG0659|consen    4 YEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFM   83 (318)
T ss_pred             hhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEec
Confidence            455678899987  88888765  788887                             788888899999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCcee
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIV  571 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~  571 (702)
                      +. +|+..|++....++..++..++.++++||+|||++   .|+||||||.|+|++++|.+||+|||+|+.+........
T Consensus        84 ~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~  159 (318)
T KOG0659|consen   84 PT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT  159 (318)
T ss_pred             cc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence            76 99999999887899999999999999999999999   999999999999999999999999999999865554332


Q ss_pred             eceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccc------
Q 038002          572 AGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE------  644 (702)
Q Consensus       572 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  644 (702)
                       ...-|..|+|||.+.+ +.|+..+||||.|||+.||+-|.+-|.+.. .-++....-.+........+++...      
T Consensus       160 -~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~s-DidQL~~If~~LGTP~~~~WP~~~~lpdY~~  237 (318)
T KOG0659|consen  160 -HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDS-DIDQLSKIFRALGTPTPDQWPEMTSLPDYVK  237 (318)
T ss_pred             -cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCc-hHHHHHHHHHHcCCCCcccCccccccccHHH
Confidence             3367999999997765 689999999999999999999887776542 2222211111111111111111110      


Q ss_pred             ---------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038002          645 ---------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML  680 (702)
Q Consensus       645 ---------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  680 (702)
                               ..+-........+++..|+..||.+|+++.|++++=
T Consensus       238 ~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~  282 (318)
T KOG0659|consen  238 IQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHP  282 (318)
T ss_pred             HhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcch
Confidence                     012344566779999999999999999999998764

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=6.9e-32  Score=290.34  Aligned_cols=208  Identities=23%  Similarity=0.267  Sum_probs=173.0

Q ss_pred             cccceEEEeEE--EEEeeeeh--hhhHhh-------------------------------eeeEEEEEecCCeeEEEEec
Q 038002          446 NDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       446 ~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      .-.+.||+|.|  |.++....  ..+|||                               ++.++..|++.+++|+||||
T Consensus       371 ~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey  450 (694)
T KOG0694|consen  371 RLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEY  450 (694)
T ss_pred             EEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEe
Confidence            34578999999  88888765  778887                               78889999999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      +.||++..+++  ...+++..+.-++..|+.||.|||++   |||+||||.+|||+|.+|++||+|||+++.-... ...
T Consensus       451 ~~Ggdm~~~~~--~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~-g~~  524 (694)
T KOG0694|consen  451 VAGGDLMHHIH--TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ-GDR  524 (694)
T ss_pred             cCCCcEEEEEe--cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccCCC-CCc
Confidence            99999554443  23699999999999999999999999   9999999999999999999999999999864322 235


Q ss_pred             eeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHH
Q 038002          571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI  650 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  650 (702)
                      ..+++|||.|+|||++.+..|+.++|.|||||+||||+.|+.||....   ++..+     ..+...      +..++.-
T Consensus       525 TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd---Eee~F-----dsI~~d------~~~yP~~  590 (694)
T KOG0694|consen  525 TSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD---EEEVF-----DSIVND------EVRYPRF  590 (694)
T ss_pred             cccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC---HHHHH-----HHHhcC------CCCCCCc
Confidence            678999999999999999999999999999999999999999997552   11111     111111      1234556


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCH
Q 038002          651 TLERMVKTGLLCIQDEPNLRPSM  673 (702)
Q Consensus       651 ~~~~l~~li~~cL~~dP~~RPt~  673 (702)
                      .+.+.+.++.++|..+|++|.-+
T Consensus       591 ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  591 LSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             ccHHHHHHHHHHhccCcccccCC
Confidence            67889999999999999999765

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.97  E-value=3e-32  Score=261.98  Aligned_cols=192  Identities=26%  Similarity=0.366  Sum_probs=160.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+.+.+.++.+...++|+|.|+.|.|.|+|...- .+++.+..+|++|+.+|++|||.+   +|+||||||+|||++++.
T Consensus        85 II~l~D~yes~sF~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~  160 (411)
T KOG0599|consen   85 IIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNM  160 (411)
T ss_pred             EEEeeeeccCcchhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeecccc
Confidence            8999999999999999999999999999997654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCccccc------CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN------SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      ++||+|||++..+.....  ....+|||+|+|||.++      ...|+..+|+|++|||+|.|+.|.+||...    .+.
T Consensus       161 ~i~isDFGFa~~l~~Gek--LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR----kQm  234 (411)
T KOG0599|consen  161 NIKISDFGFACQLEPGEK--LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR----KQM  234 (411)
T ss_pred             ceEEeccceeeccCCchh--HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH----HHH
Confidence            999999999998755443  56789999999999774      346788999999999999999999999643    111


Q ss_pred             hhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .    ....+.++...-  ..+.-.+.+....+||.+||+.||.+|.|++|+++
T Consensus       235 l----MLR~ImeGkyqF--~speWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  235 L----MLRMIMEGKYQF--RSPEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             H----HHHHHHhccccc--CCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence            1    122223333221  11223356778899999999999999999999886

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=1.3e-31  Score=269.88  Aligned_cols=189  Identities=22%  Similarity=0.318  Sum_probs=161.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+.+++.|++.+.++|||||..+|.|.|++.+.+ .+++.++..+++||..|+.|+|++   +++|||||.+|||+|.++
T Consensus       115 II~IyEVFENkdKIvivMEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~  190 (668)
T KOG0611|consen  115 IIQIYEVFENKDKIVIVMEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNN  190 (668)
T ss_pred             eeehhhhhcCCceEEEEEEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCC
Confidence            8999999999999999999999999999998776 899999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCC-ccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT-VKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      ++||+|||++..+....  ..++++|++-|.+||++.+.+|. +.+|.|||||+||.|+.|..||++.+.    ..    
T Consensus       191 NiKIADFGLSNly~~~k--fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh----k~----  260 (668)
T KOG0611|consen  191 NIKIADFGLSNLYADKK--FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH----KR----  260 (668)
T ss_pred             Ceeeeccchhhhhcccc--HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH----HH----
Confidence            99999999999875433  46789999999999999998874 889999999999999999999986521    11    


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML  680 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  680 (702)
                      ...++..+...+       ++.+....-||+|||..||++|.|+++|....
T Consensus       261 lvrQIs~GaYrE-------P~~PSdA~gLIRwmLmVNP~RRATieDiAsHW  304 (668)
T KOG0611|consen  261 LVRQISRGAYRE-------PETPSDASGLIRWMLMVNPERRATIEDIASHW  304 (668)
T ss_pred             HHHHhhcccccC-------CCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence            122223333221       22344567789999999999999999998754

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.7e-32  Score=280.82  Aligned_cols=217  Identities=23%  Similarity=0.214  Sum_probs=177.5

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      .+.....||+|.|  ||+|....  ..||+|                            |.++++.+-.+..++++||||
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            3444578999999  99998765  788888                            334455566688999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCcee
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIV  571 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~  571 (702)
                      .||++.+.|+... .+++.++.-++++++.||.|||.+   +.+|||||+.|||+..+|.+||+|||.+..+....... 
T Consensus        94 ~gGsv~~lL~~~~-~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr-  168 (467)
T KOG0201|consen   94 GGGSVLDLLKSGN-ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR-  168 (467)
T ss_pred             cCcchhhhhccCC-CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhhcc-
Confidence            9999999997654 458888888999999999999999   99999999999999999999999999998875544433 


Q ss_pred             eceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHH
Q 038002          572 AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT  651 (702)
Q Consensus       572 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  651 (702)
                      ..+.||+.|||||+++...|+.|+||||||++.+||++|.+|+.......-.             -.+.+...+.++...
T Consensus       169 ~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl-------------flIpk~~PP~L~~~~  235 (467)
T KOG0201|consen  169 KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL-------------FLIPKSAPPRLDGDF  235 (467)
T ss_pred             ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE-------------EeccCCCCCcccccc
Confidence            6788999999999999889999999999999999999999999654221100             011222223334466


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          652 LERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       652 ~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      +..+.+++..||.+||+.||++.++++
T Consensus       236 S~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  236 SPPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             CHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence            778999999999999999999999886

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.97  E-value=6.4e-31  Score=274.69  Aligned_cols=194  Identities=26%  Similarity=0.299  Sum_probs=154.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+.+...+.+++..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.   +|+||||||+||+++++
T Consensus        62 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~  138 (285)
T cd05631          62 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDR  138 (285)
T ss_pred             EEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCC
Confidence            7778888889999999999999999998886543 3588999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      +.+||+|||++.......  ......|++.|+|||++.+..++.++|||||||++|||++|+.||...........    
T Consensus       139 ~~~kl~Dfg~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~----  212 (285)
T cd05631         139 GHIRISDLGLAVQIPEGE--TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE----  212 (285)
T ss_pred             CCEEEeeCCCcEEcCCCC--eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH----
Confidence            999999999998753322  22345689999999999999999999999999999999999999975422111111    


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPS-----MKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~~  679 (702)
                      .........      ...+...+..+.+++.+||+.||++||+     ++++++.
T Consensus       213 ~~~~~~~~~------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         213 VDRRVKEDQ------EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             HHHHhhccc------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence            111111110      1223345668889999999999999997     7888873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PHA02988 hypothetical protein; Provisional

Probab=99.97  E-value=4.7e-31  Score=275.42  Aligned_cols=194  Identities=21%  Similarity=0.292  Sum_probs=155.0

Q ss_pred             eeeEEEEEec----CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEE
Q 038002          471 ISSLLVYKHR----SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNIL  545 (702)
Q Consensus       471 i~~l~~~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIl  545 (702)
                      |+++++++.+    ....++||||+++|+|.+++.+.. .+++.....++.|++.||+|||+ .   +++||||||+||+
T Consensus        80 Iv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~---~~~Hrdlkp~nil  155 (283)
T PHA02988         80 ILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLYKYT---NKPYKNLTSVSFL  155 (283)
T ss_pred             EEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHHhcC---CCCCCcCChhhEE
Confidence            7888877755    457899999999999999998754 68899999999999999999997 4   7889999999999


Q ss_pred             EeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccC--CCCCccccccchhHhHHHhhhCCcCCcCCCCCcch
Q 038002          546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS--GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE  623 (702)
Q Consensus       546 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~  623 (702)
                      +++++.+||+|||+++......    ....++..|+|||++.+  ..++.++|||||||++|||++|+.||.....  .+
T Consensus       156 l~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~--~~  229 (283)
T PHA02988        156 VTENYKLKIICHGLEKILSSPP----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT--KE  229 (283)
T ss_pred             ECCCCcEEEcccchHhhhcccc----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH--HH
Confidence            9999999999999988653322    23457889999999876  6889999999999999999999999974411  11


Q ss_pred             hhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          624 VLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                            ...........    ...+...++.+.+++.+||+.||++|||++|+++.|+...
T Consensus       230 ------~~~~i~~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        230 ------IYDLIINKNNS----LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             ------HHHHHHhcCCC----CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence                  11111111111    1122234667899999999999999999999999998754

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.97  E-value=5.3e-32  Score=283.06  Aligned_cols=213  Identities=22%  Similarity=0.294  Sum_probs=178.0

Q ss_pred             ccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          447 DKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      .-..||+|.|  ||+|....  ..||+|                             |+.++++|++..+.++|.||+.|
T Consensus         6 v~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g   85 (808)
T KOG0597|consen    6 VYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG   85 (808)
T ss_pred             HHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh
Confidence            3456777877  88887665  566665                             88889999999999999999987


Q ss_pred             CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeec
Q 038002          494 GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG  573 (702)
Q Consensus       494 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  573 (702)
                       +|..+|...+ .++++.+..++.+++.||.|||++   +|+|||+||.|||++..+.+|++|||+|+.+.. .+...+.
T Consensus        86 -~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~t~vlts  159 (808)
T KOG0597|consen   86 -DLFTILEQDG-KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST-NTSVLTS  159 (808)
T ss_pred             -hHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc-Cceeeee
Confidence             9999998766 899999999999999999999999   999999999999999999999999999998754 3445677


Q ss_pred             eeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHH
Q 038002          574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLE  653 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  653 (702)
                      +.|||-|||||...+++|+..+|+||+|||+||+.+|++||...       .+.. ....+....    +  ..+...+.
T Consensus       160 ikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-------si~~-Lv~~I~~d~----v--~~p~~~S~  225 (808)
T KOG0597|consen  160 IKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-------SITQ-LVKSILKDP----V--KPPSTASS  225 (808)
T ss_pred             ccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-------HHHH-HHHHHhcCC----C--CCcccccH
Confidence            89999999999999999999999999999999999999999643       1111 111111111    1  23446788


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          654 RMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       654 ~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .+.+++...|++||.+|.+..+++..
T Consensus       226 ~f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  226 SFVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             HHHHHHHHHhhcChhhcccHHHHhcC
Confidence            89999999999999999999998863

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=4.4e-31  Score=281.05  Aligned_cols=189  Identities=22%  Similarity=0.292  Sum_probs=154.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++...++.++..++||||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        57 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~  132 (323)
T cd05571          57 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDG  132 (323)
T ss_pred             CCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCC
Confidence            6778888999999999999999999999997654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....   ... .    
T Consensus       133 ~~kl~DfG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~---~~~-~----  203 (323)
T cd05571         133 HIKITDFGLCKEGISDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HEK-L----  203 (323)
T ss_pred             CEEEeeCCCCcccccCC-CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC---HHH-H----
Confidence            99999999987532221 22334679999999999998899999999999999999999999996431   111 1    


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~  678 (702)
                      .........      ..+......+.+++.+||+.||++||     +++++++
T Consensus       204 ~~~~~~~~~------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         204 FELILMEEI------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             HHHHHcCCC------CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence            111111111      12334566788999999999999999     7888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.97  E-value=7.5e-31  Score=280.39  Aligned_cols=195  Identities=19%  Similarity=0.243  Sum_probs=154.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++.++..++||||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~  142 (332)
T cd05614          67 LVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEG  142 (332)
T ss_pred             cccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCC
Confidence            6777788899999999999999999999997654 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++...............||+.|+|||.+.+. .++.++|||||||++|||++|+.||.............  
T Consensus       143 ~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~--  220 (332)
T cd05614         143 HVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVS--  220 (332)
T ss_pred             CEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHH--
Confidence            999999999986544333333456799999999988765 47889999999999999999999997542222111111  


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  679 (702)
                        ......      +...+......+.+++.+||+.||++||     +++++++.
T Consensus       221 --~~~~~~------~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         221 --RRILKC------DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             --HHHhcC------CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence              111111      1122233456788999999999999999     67777753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=5.4e-31  Score=281.62  Aligned_cols=195  Identities=24%  Similarity=0.251  Sum_probs=155.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++.++..|+||||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        63 iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~  138 (333)
T cd05600          63 LVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASG  138 (333)
T ss_pred             CccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCC
Confidence            7778889999999999999999999999997654 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++.....    ......|++.|+|||++.+..++.++|||||||++|||++|..||...........+..  
T Consensus       139 ~~kL~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~--  212 (333)
T cd05600         139 HIKLTDFGLSKGIVT----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKY--  212 (333)
T ss_pred             CEEEEeCcCCccccc----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHh--
Confidence            999999999986533    22345689999999999988999999999999999999999999975421110000000  


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                         . ................+..+.+++.+||+.+|++||+++++++.
T Consensus       213 ---~-~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         213 ---W-KETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             ---c-cccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence               0 00000000001112346788899999999999999999999975

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.97  E-value=7.7e-31  Score=274.14  Aligned_cols=204  Identities=20%  Similarity=0.190  Sum_probs=152.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++.++..++||||++++.|..+.. ....+++..+..++.||+.||+|||+.   +|+||||||+||+++.++
T Consensus        62 iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~  137 (287)
T cd07848          62 IVELKEAFRRRGKLYLVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHND  137 (287)
T ss_pred             ccchhhhEecCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCC
Confidence            6777788888999999999999887765544 334689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++...............|++.|+|||++.+..++.++|||||||++|||++|+.||................
T Consensus       138 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~  217 (287)
T cd07848         138 VLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVL  217 (287)
T ss_pred             cEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhh
Confidence            99999999998764333323334568999999999988889999999999999999999999997542111100000000


Q ss_pred             -------HHh-hhcccccccccc----------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          631 -------YNC-FVAGEFNKLVEE----------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       631 -------~~~-~~~~~~~~~~~~----------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                             ... ...........+          ......+..+.+++.+||+.||++|||++|+++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         218 GPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             CCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                   000 000000000000          011224567999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.97  E-value=1e-30  Score=270.19  Aligned_cols=197  Identities=20%  Similarity=0.235  Sum_probs=157.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..+++.++||||+++|+|.+++......+++.+++.++.||+.||+|||++   +++||||||+||+++.++
T Consensus        68 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~  144 (266)
T cd05064          68 IVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDL  144 (266)
T ss_pred             cCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCC
Confidence            78888899999999999999999999999987665789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+|++|||.+...............++..|+|||.+.+..++.++||||||+++||+++ |+.||......    ..   
T Consensus       145 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~----~~---  217 (266)
T cd05064         145 VCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ----DV---  217 (266)
T ss_pred             cEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH----HH---
Confidence            99999999876532222111112334678999999988899999999999999999775 99999643111    11   


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                       ......+..     ...+...+..+.+++.+||+.+|++||++++|++.|+++
T Consensus       218 -~~~~~~~~~-----~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         218 -IKAVEDGFR-----LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             -HHHHHCCCC-----CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence             111111111     112233456788999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4.8e-31  Score=272.62  Aligned_cols=187  Identities=20%  Similarity=0.322  Sum_probs=163.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE-eCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI-DDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll-~~~  549 (702)
                      |++|++...+...+|||+|.-++|+|.++|.++...+.++.+.+++.||+.|+.|+|+.   .+|||||||+|+.+ ..-
T Consensus        79 iVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKl  155 (864)
T KOG4717|consen   79 IVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKL  155 (864)
T ss_pred             eeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeec
Confidence            99999999999999999999999999999999988999999999999999999999999   99999999999876 677


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCC-ccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT-VKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      |.+||.|||++..+...+.  ....+|+..|.|||++.+..|+ +++||||||||||.|++|+.||+.....+.      
T Consensus       156 GlVKLTDFGFSNkf~PG~k--L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET------  227 (864)
T KOG4717|consen  156 GLVKLTDFGFSNKFQPGKK--LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET------  227 (864)
T ss_pred             CceEeeeccccccCCCcch--hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh------
Confidence            8999999999987755443  5677899999999999998886 678999999999999999999975522211      


Q ss_pred             HHHHhhhcccccccccc--ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEE--EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                                +..+++-  .++...+.++.+||..||+.||.+|.+.+||+.
T Consensus       228 ----------LTmImDCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  228 ----------LTMIMDCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             ----------hhhhhcccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence                      1122333  457788999999999999999999999999875

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.97  E-value=7.5e-31  Score=280.17  Aligned_cols=194  Identities=24%  Similarity=0.260  Sum_probs=154.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+++++..++||||+++|+|.+++......+++..+..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~  139 (330)
T cd05601          63 IPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTG  139 (330)
T ss_pred             CcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCC
Confidence            67777888899999999999999999999988755799999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCccccc------CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN------SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      .+||+|||++...............||+.|+|||++.      ...++.++|||||||++|||++|+.||.......   
T Consensus       140 ~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~---  216 (330)
T cd05601         140 HIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK---  216 (330)
T ss_pred             CEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH---
Confidence            9999999999876544433333456899999999876      4567899999999999999999999996442111   


Q ss_pred             hhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .     ...+....  ..............+.+++..||+ +|++||+++++++
T Consensus       217 ~-----~~~i~~~~--~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         217 T-----YNNIMNFQ--RFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             H-----HHHHHcCC--CccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            1     11111110  001111112345678889999998 9999999999986

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=1.3e-30  Score=277.86  Aligned_cols=190  Identities=22%  Similarity=0.297  Sum_probs=153.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++...++.++..++||||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus        57 iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~  132 (328)
T cd05593          57 LTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRER-VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDG  132 (328)
T ss_pred             CcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCC
Confidence            6777888999999999999999999999987654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||+++...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.....  .+  .    
T Consensus       133 ~~kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~--~~--~----  203 (328)
T cd05593         133 HIKITDFGLCKEGITDA-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EK--L----  203 (328)
T ss_pred             cEEEecCcCCccCCCcc-cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH--HH--H----
Confidence            99999999987532221 223345689999999999888899999999999999999999999964311  11  0    


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVILM  679 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  679 (702)
                      ........      ...+......+.+++.+||+.||++||     +++|+++.
T Consensus       204 ~~~~~~~~------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         204 FELILMED------IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HHHhccCC------ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            11111111      112233456788999999999999997     89998864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.97  E-value=1.4e-30  Score=276.37  Aligned_cols=189  Identities=23%  Similarity=0.340  Sum_probs=152.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++.++..++||||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        58 i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~  133 (316)
T cd05592          58 LTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDG  133 (316)
T ss_pred             ccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCC
Confidence            6778888899999999999999999999997654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++....... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.....   ...     
T Consensus       134 ~~kL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~---~~~-----  204 (316)
T cd05592         134 HIKIADFGMCKENMNGE-GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE---DEL-----  204 (316)
T ss_pred             CEEEccCcCCeECCCCC-CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH---HHH-----
Confidence            99999999998643222 223345689999999999988899999999999999999999999975411   111     


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMK-NVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~-evl~  678 (702)
                      .......      ....+......+.+++.+||+.||++||++. ++++
T Consensus       205 ~~~i~~~------~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         205 FDSILND------RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             HHHHHcC------CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence            1111111      0112233456778899999999999999875 4543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.1e-30  Score=276.55  Aligned_cols=189  Identities=22%  Similarity=0.223  Sum_probs=152.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+.+++..++||||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        55 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~  130 (312)
T cd05585          55 IVPLKFSFQSPEKLYLVLAFINGGELFHHLQREG-RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQG  130 (312)
T ss_pred             EeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCC
Confidence            7888889999999999999999999999997654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||+++...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.....   ..     .
T Consensus       131 ~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~---~~-----~  201 (312)
T cd05585         131 HIALCDFGLCKLNMKDD-DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV---NE-----M  201 (312)
T ss_pred             cEEEEECcccccCccCC-CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH---HH-----H
Confidence            99999999987543222 223345689999999999988999999999999999999999999964311   11     1


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPS---MKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt---~~evl~  678 (702)
                      .........      ..+......+.+++.+||+.||++||+   +.|++.
T Consensus       202 ~~~~~~~~~------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         202 YRKILQEPL------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             HHHHHcCCC------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence            111111111      122344567889999999999999986   455543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.97  E-value=2.2e-30  Score=266.74  Aligned_cols=197  Identities=25%  Similarity=0.410  Sum_probs=157.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++..+..++..++||||+++++|.+++... ...+++..+..++.|++.||+|||+.   +++|+||||+||+++.+
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~  139 (261)
T cd05072          63 LVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSES  139 (261)
T ss_pred             eeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCC
Confidence            788888888999999999999999999999754 34588899999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.+||+|||++...............++..|+|||.+....++.++||||||+++|+|++ |..||......    ....
T Consensus       140 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~----~~~~  215 (261)
T cd05072         140 LMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS----DVMS  215 (261)
T ss_pred             CcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH----HHHH
Confidence            999999999998764333222223345678999999988889999999999999999998 99999643111    1111


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      .    .... ..    .+.....+..+.+++.+||+.+|++||++++++++|++.
T Consensus       216 ~----~~~~-~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         216 A----LQRG-YR----MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             H----HHcC-CC----CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            1    1111 00    111122456788999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=1.5e-30  Score=276.46  Aligned_cols=184  Identities=24%  Similarity=0.365  Sum_probs=150.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++..+..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||++   +|+||||||+||+++.++
T Consensus        58 iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~  133 (320)
T cd05590          58 LTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEG  133 (320)
T ss_pred             hhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCC
Confidence            6778888999999999999999999999987654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++....... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.....   . .    .
T Consensus       134 ~~kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~---~-~----~  204 (320)
T cd05590         134 HCKLADFGMCKEGIFNG-KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE---D-D----L  204 (320)
T ss_pred             cEEEeeCCCCeecCcCC-CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH---H-H----H
Confidence            99999999987542222 123345689999999999988999999999999999999999999964411   1 1    1


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSM  673 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~  673 (702)
                      ...+.....      ..+......+.+++.+||+.||++||++
T Consensus       205 ~~~i~~~~~------~~~~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         205 FEAILNDEV------VYPTWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             HHHHhcCCC------CCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence            111111111      1122345678899999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.97  E-value=1.5e-30  Score=282.37  Aligned_cols=199  Identities=27%  Similarity=0.406  Sum_probs=155.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC----------------------------------------------
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE----------------------------------------------  504 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------------------------------------------  504 (702)
                      |+++++.+..++..++||||+++|+|.+++....                                              
T Consensus       104 Iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (374)
T cd05106         104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVE  183 (374)
T ss_pred             eeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccc
Confidence            7888889999999999999999999999986421                                              


Q ss_pred             -----------------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          505 -----------------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       505 -----------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                                             ..+++.+++.++.||++||+|||++   +|+||||||+||++++++.+||+|||++.
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~  260 (374)
T cd05106         184 MRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLAR  260 (374)
T ss_pred             cCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeee
Confidence                                   1367788899999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhcccc
Q 038002          562 LLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEF  639 (702)
Q Consensus       562 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  639 (702)
                      ......... .....++..|+|||++.+..++.++||||||+++|||++ |+.||.......   ..    ......+ .
T Consensus       261 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~---~~----~~~~~~~-~  332 (374)
T cd05106         261 DIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS---KF----YKMVKRG-Y  332 (374)
T ss_pred             eccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH---HH----HHHHHcc-c
Confidence            654332211 122335668999999988899999999999999999997 999996542111   11    1111111 1


Q ss_pred             ccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          640 NKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       640 ~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .    ...+...+..+.+++.+||+.||++||++++|+++|+++.
T Consensus       333 ~----~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         333 Q----MSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             C----ccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            0    0111123467889999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.97  E-value=1.6e-30  Score=275.90  Aligned_cols=188  Identities=23%  Similarity=0.318  Sum_probs=151.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++++++.|+||||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        58 i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~  133 (316)
T cd05620          58 LTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDG  133 (316)
T ss_pred             ccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCC
Confidence            6778888999999999999999999999987654 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||+++..... ........|++.|+|||++.+..++.++|||||||++|||++|+.||.....   .. .    
T Consensus       134 ~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~---~~-~----  204 (316)
T cd05620         134 HIKIADFGMCKENVFG-DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE---DE-L----  204 (316)
T ss_pred             CEEeCccCCCeecccC-CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HH-H----
Confidence            9999999998753221 1223446789999999999988999999999999999999999999964311   11 1    


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMK-NVI  677 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~-evl  677 (702)
                      .......      ....+......+.+++.+||+.||++||++. +++
T Consensus       205 ~~~~~~~------~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         205 FESIRVD------TPHYPRWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHHHHhC------CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            1111111      0111223456788999999999999999984 555

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.97  E-value=3.6e-30  Score=269.42  Aligned_cols=203  Identities=20%  Similarity=0.223  Sum_probs=151.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+.+++..++||||+++ +|.+++......+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~  140 (288)
T cd07871          65 IVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKG  140 (288)
T ss_pred             EeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCC
Confidence            78888889999999999999975 99999877665688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++....... .......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||...............
T Consensus       141 ~~kl~DfG~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~  219 (288)
T cd07871         141 ELKLADFGLARAKSVPT-KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRL  219 (288)
T ss_pred             CEEECcCcceeeccCCC-ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            99999999997653222 12234567899999998765 56899999999999999999999999754221111000000


Q ss_pred             -------HHHhhh-cccccccccc--------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 -------VYNCFV-AGEFNKLVEE--------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 -------~~~~~~-~~~~~~~~~~--------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                             .+.... ...+.....+        .........+++++.+||+.||.+|||++|+++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         220 LGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             hCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                   000000 0000000000        001123457889999999999999999999985

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.97  E-value=5.4e-30  Score=273.13  Aligned_cols=191  Identities=20%  Similarity=0.325  Sum_probs=151.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+.++..++..+..++||||+++|+|.+++...+ .+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        58 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~  133 (327)
T cd05617          58 LVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADG  133 (327)
T ss_pred             EeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCC
Confidence            7788889999999999999999999999887654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||........ .......
T Consensus       134 ~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~-~~~~~~~  211 (327)
T cd05617         134 HIKLTDYGMCKEGLGPG-DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPD-MNTEDYL  211 (327)
T ss_pred             CEEEeccccceeccCCC-CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcc-cccHHHH
Confidence            99999999987532221 223346789999999999989999999999999999999999999965322111 1111112


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSM  673 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~  673 (702)
                      .........      ..+...+..+.+++.+||+.||++||++
T Consensus       212 ~~~~~~~~~------~~p~~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         212 FQVILEKPI------RIPRFLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             HHHHHhCCC------CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            222221111      1222345677899999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.97  E-value=2.3e-30  Score=275.68  Aligned_cols=189  Identities=22%  Similarity=0.315  Sum_probs=150.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..++..|+||||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus        63 i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~  138 (324)
T cd05587          63 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEG  138 (324)
T ss_pred             eeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCC
Confidence            5667788888999999999999999999997654 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ...     
T Consensus       139 ~~kL~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~-----  209 (324)
T cd05587         139 HIKIADFGMCKENIFGG-KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE---DEL-----  209 (324)
T ss_pred             CEEEeecCcceecCCCC-CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHH-----
Confidence            99999999987532221 123345689999999999988999999999999999999999999964311   111     


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSM-----KNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~-----~evl~  678 (702)
                      ........      ...+......+.+++.+||+.||.+|++.     +++++
T Consensus       210 ~~~i~~~~------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  256 (324)
T cd05587         210 FQSIMEHN------VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE  256 (324)
T ss_pred             HHHHHcCC------CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            11111111      11222345678899999999999999986     55554

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.97  E-value=3.5e-30  Score=274.78  Aligned_cols=192  Identities=19%  Similarity=0.319  Sum_probs=151.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++.++..++||||+++|+|..++.... .+++..+..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        58 iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~  133 (329)
T cd05618          58 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEG  133 (329)
T ss_pred             CCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCC
Confidence            7788888999999999999999999999887654 789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcc-hhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTAD-EVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~~  629 (702)
                      .+||+|||+++...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||........ ......+
T Consensus       134 ~~kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~  212 (329)
T cd05618         134 HIKLTDYGMCKEGLRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY  212 (329)
T ss_pred             CEEEeeCCccccccCCC-CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHH
Confidence            99999999987532221 123346789999999999998999999999999999999999999964311111 1111122


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSM  673 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~  673 (702)
                      ..........      .++......+.+++.+||+.||++||++
T Consensus       213 ~~~~i~~~~~------~~p~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         213 LFQVILEKQI------RIPRSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             HHHHHhcCCC------CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence            2222222111      1233445678899999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=1.5e-30  Score=276.65  Aligned_cols=190  Identities=21%  Similarity=0.286  Sum_probs=153.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++.++..|+||||+++++|.+.+.... .+++..+..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        58 i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~  133 (321)
T cd05591          58 LTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEG  133 (321)
T ss_pred             ccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCC
Confidence            6778889999999999999999999999987654 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++....... .......|++.|+|||++.+..++.++||||||+++|||++|+.||.....   ...     
T Consensus       134 ~~kL~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~---~~~-----  204 (321)
T cd05591         134 HCKLADFGMCKEGILNG-VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE---DDL-----  204 (321)
T ss_pred             CEEEeecccceecccCC-ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH---HHH-----
Confidence            99999999987543222 223345689999999999988999999999999999999999999975421   111     


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-------CHHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-------SMKNVILM  679 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-------t~~evl~~  679 (702)
                      .........      ..+......+.+++.+||+.||++||       +++++++.
T Consensus       205 ~~~i~~~~~------~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         205 FESILHDDV------LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             HHHHHcCCC------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence            111111111      11222356788999999999999999       78888754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.97  E-value=3.5e-30  Score=271.59  Aligned_cols=203  Identities=20%  Similarity=0.209  Sum_probs=149.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++.++.+++..++||||++ ++|.+++......+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~  140 (303)
T cd07869          65 IVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTG  140 (303)
T ss_pred             cCeEEEEEecCCeEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCC
Confidence            6777888999999999999995 688888877666789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++....... .......+++.|+|||++.+ ..++.++|||||||++|||++|..||.......+.......
T Consensus       141 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~  219 (303)
T cd07869         141 ELKLADFGLARAKSVPS-HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFL  219 (303)
T ss_pred             CEEECCCCcceeccCCC-ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHH
Confidence            99999999987543222 12234567899999998765 46789999999999999999999999754221111110000


Q ss_pred             HHHhhhcc--------------cccccccccc-----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 VYNCFVAG--------------EFNKLVEEEV-----DKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 ~~~~~~~~--------------~~~~~~~~~~-----~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ........              ..........     .......+.+++.+||+.||++|||++|+++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         220 VLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             HhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence            00000000              0000000000     0012356789999999999999999999985

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.97  E-value=5.5e-30  Score=270.15  Aligned_cols=203  Identities=24%  Similarity=0.304  Sum_probs=153.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC------------------CCCCHHHHHHHHHHHHHHHHhhhhcCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE------------------TRPLWRDRVRIALDVARGLLYLHDECEV  532 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~  532 (702)
                      |+++++++.+.+..++||||+++++|.+++....                  ..+++.++..++.||+.||+|||+.   
T Consensus        81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---  157 (304)
T cd05096          81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---  157 (304)
T ss_pred             eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---
Confidence            8888999999999999999999999999986432                  1357788899999999999999999   


Q ss_pred             CeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh--
Q 038002          533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC--  609 (702)
Q Consensus       533 ~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt--  609 (702)
                      +|+||||||+|||++.++.+||+|||+++........ ......++..|+|||++....++.++||||||+++|||++  
T Consensus       158 ~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~  237 (304)
T cd05096         158 NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC  237 (304)
T ss_pred             CccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence            9999999999999999999999999999865333221 1223445778999999888889999999999999999987  


Q ss_pred             CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          610 CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       610 G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      +..||.....  .+ .. .............  .....+...+..+.+++.+||+.||++|||+++|.+.|++
T Consensus       238 ~~~p~~~~~~--~~-~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~  304 (304)
T cd05096         238 KEQPYGELTD--EQ-VI-ENAGEFFRDQGRQ--VYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE  304 (304)
T ss_pred             CCCCCCcCCH--HH-HH-HHHHHHhhhcccc--ccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence            5567754311  11 11 1111111111000  0011122345678999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=3e-30  Score=275.39  Aligned_cols=213  Identities=22%  Similarity=0.219  Sum_probs=168.1

Q ss_pred             ccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEec
Q 038002          445 VNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      +...+.||+|++  ||++....  ..+|+|                              |++++..+..++..++||||
T Consensus        20 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   99 (329)
T PTZ00263         20 FEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEF   99 (329)
T ss_pred             eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcC
Confidence            444567787776  77666543  444444                              77888899999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      +++++|.+++.... .+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||++.......   
T Consensus       100 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---  172 (329)
T PTZ00263        100 VVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT---  172 (329)
T ss_pred             CCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc---
Confidence            99999999998654 688899999999999999999999   99999999999999999999999999998763322   


Q ss_pred             eeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHH
Q 038002          571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI  650 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  650 (702)
                       ....|++.|+|||.+.+..++.++|||||||++|||++|+.||.....    ..    .......+..      ..+..
T Consensus       173 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~----~~----~~~~i~~~~~------~~p~~  237 (329)
T PTZ00263        173 -FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP----FR----IYEKILAGRL------KFPNW  237 (329)
T ss_pred             -ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH----HH----HHHHHhcCCc------CCCCC
Confidence             235689999999999988899999999999999999999999964311    11    1111222211      11222


Q ss_pred             HHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 038002          651 TLERMVKTGLLCIQDEPNLRPS-----MKNVILM  679 (702)
Q Consensus       651 ~~~~l~~li~~cL~~dP~~RPt-----~~evl~~  679 (702)
                      ....+.+++.+||+.||++||+     ++++++.
T Consensus       238 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        238 FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            3457889999999999999997     6777743

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.97  E-value=4.5e-30  Score=274.94  Aligned_cols=214  Identities=22%  Similarity=0.186  Sum_probs=170.4

Q ss_pred             cccccceEEEeEE--EEEeeeeh---hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF---LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~---~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      .+...+.||+|++  ||++....   ..+|+|                              |+++++++.+++..++||
T Consensus        31 ~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~  110 (340)
T PTZ00426         31 DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVL  110 (340)
T ss_pred             hcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEE
Confidence            3445678888887  77775432   234544                              788889999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+++|+|.+++.... .+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||++......  
T Consensus       111 Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~--  184 (340)
T PTZ00426        111 EFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR--  184 (340)
T ss_pred             eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCCC--
Confidence            9999999999997655 688999999999999999999999   9999999999999999999999999999875322  


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                        .....||+.|+|||++.+..++.++|||||||++|||++|..||.....    ..    .......+..      ..+
T Consensus       185 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~----~~----~~~~i~~~~~------~~p  248 (340)
T PTZ00426        185 --TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP----LL----IYQKILEGII------YFP  248 (340)
T ss_pred             --cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH----HH----HHHHHhcCCC------CCC
Confidence              2345689999999999888899999999999999999999999964311    11    1111222211      112


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRP-----SMKNVILM  679 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  679 (702)
                      ......+.+++.+||+.||++|+     +++++++.
T Consensus       249 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        249 KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence            23345678999999999999995     89988775

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.97  E-value=4.1e-30  Score=274.29  Aligned_cols=197  Identities=19%  Similarity=0.309  Sum_probs=154.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+++++..|+||||+++|+|.+++...+ .+++..+..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        58 Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~  133 (329)
T cd05588          58 LVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQR-KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEG  133 (329)
T ss_pred             CCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCC
Confidence            7788889999999999999999999999887654 799999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcc-hhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTAD-EVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~~  629 (702)
                      .+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......+
T Consensus       134 ~~kL~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~  212 (329)
T cd05588         134 HIKLTDYGMCKEGIRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDY  212 (329)
T ss_pred             CEEECcCccccccccCC-CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHH
Confidence            99999999987432211 223346789999999999988999999999999999999999999974321110 1111122


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCC------HHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPS------MKNVIL  678 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt------~~evl~  678 (702)
                      ..........      ..+......+.+++.+||+.||.+||+      ++++++
T Consensus       213 ~~~~~~~~~~------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         213 LFQVILEKQI------RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             HHHHHHcCCC------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence            2222222211      122234567889999999999999997      567764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.97  E-value=4.1e-30  Score=274.60  Aligned_cols=200  Identities=25%  Similarity=0.338  Sum_probs=154.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..++..++||||+++++|.+++.... .+++..+..++.|++.||+|||+..  +|+||||||+||+++.++
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~  141 (331)
T cd06649          65 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRG  141 (331)
T ss_pred             CCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCC
Confidence            7888888999999999999999999999997654 6889999999999999999999851  699999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++.......   .....|++.|+|||.+.+..++.++||||||+++|||++|+.||.......    +....
T Consensus       142 ~~kl~Dfg~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~----~~~~~  214 (331)
T cd06649         142 EIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE----LEAIF  214 (331)
T ss_pred             cEEEccCcccccccccc---cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHh
Confidence            99999999987653322   234568999999999998899999999999999999999999996432110    00000


Q ss_pred             HHhhhcc----------------------------------cccccc---cc-ccCHHHHHHHHHHHHHcccCCCCCCCC
Q 038002          631 YNCFVAG----------------------------------EFNKLV---EE-EVDKITLERMVKTGLLCIQDEPNLRPS  672 (702)
Q Consensus       631 ~~~~~~~----------------------------------~~~~~~---~~-~~~~~~~~~l~~li~~cL~~dP~~RPt  672 (702)
                      .......                                  ......   .+ .........+.+++.+||+.||++|||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt  294 (331)
T cd06649         215 GRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERAD  294 (331)
T ss_pred             cccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCC
Confidence            0000000                                  000000   00 001134567999999999999999999


Q ss_pred             HHHHHHHH
Q 038002          673 MKNVILML  680 (702)
Q Consensus       673 ~~evl~~L  680 (702)
                      ++||++..
T Consensus       295 ~~ell~h~  302 (331)
T cd06649         295 LKMLMNHT  302 (331)
T ss_pred             HHHHhcCh
Confidence            99998754

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.2e-30  Score=280.79  Aligned_cols=194  Identities=23%  Similarity=0.261  Sum_probs=154.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++++++.++||||+++++|.+++... ..+++..+..++.||+.||+|||++   ||+||||||+||+++.++
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~  138 (350)
T cd05573          63 IVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADG  138 (350)
T ss_pred             ccchhhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCC
Confidence            667777888899999999999999999999876 4789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCC----------------------------CceeeceeccccccCcccccCCCCCccccccchhH
Q 038002          551 RAKISDFGLAKLLMPNQ----------------------------TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV  602 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv  602 (702)
                      .+||+|||++.......                            ........||+.|+|||.+.+..++.++|||||||
T Consensus       139 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  218 (350)
T cd05573         139 HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGV  218 (350)
T ss_pred             CEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecch
Confidence            99999999998664332                            11223456899999999999999999999999999


Q ss_pred             hHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHH
Q 038002          603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPS-MKNVILM  679 (702)
Q Consensus       603 il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt-~~evl~~  679 (702)
                      ++|||++|+.||.......        ....+....  ...........+..+.+++.+||+ ||.+||+ ++++++.
T Consensus       219 il~ell~g~~Pf~~~~~~~--------~~~~i~~~~--~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         219 ILYEMLYGFPPFYSDTLQE--------TYNKIINWK--ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             hhhhhccCCCCCCCCCHHH--------HHHHHhccC--CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            9999999999997542110        011111100  000001111146778889999998 9999999 9999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.97  E-value=2.6e-30  Score=275.14  Aligned_cols=184  Identities=24%  Similarity=0.332  Sum_probs=149.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++.++..++||||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus        63 i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~  138 (323)
T cd05616          63 LTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEG  138 (323)
T ss_pred             EeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCC
Confidence            5667788899999999999999999999987654 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ...     
T Consensus       139 ~~kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~---~~~-----  209 (323)
T cd05616         139 HIKIADFGMCKENMWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DEL-----  209 (323)
T ss_pred             cEEEccCCCceecCCCC-CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH---HHH-----
Confidence            99999999987543222 123345689999999999999999999999999999999999999964311   111     


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSM  673 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~  673 (702)
                      ...+.....      ..+......+.+++.+||+.||++|++.
T Consensus       210 ~~~i~~~~~------~~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         210 FQSIMEHNV------AYPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             HHHHHhCCC------CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            111111111      1223345678899999999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.4e-30  Score=264.74  Aligned_cols=215  Identities=25%  Similarity=0.249  Sum_probs=176.0

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      ..++..+.||+|+|  ||....+.  ..+|.|                              |+.+.-.|++.+.++|||
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL  264 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL  264 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence            34556789999999  77666654  777876                              888889999999999999


Q ss_pred             ecCCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          489 EFMSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      ..|.||+|.-+|.+.+. .+++..++-++.+|+.||++||.+   +||.|||||+|||+|+.|+++|+|+|+|..+...+
T Consensus       265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~  341 (591)
T KOG0986|consen  265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK  341 (591)
T ss_pred             EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCCC
Confidence            99999999999988754 588999999999999999999999   99999999999999999999999999999886555


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                      .  .....||.+|||||++.+..|+...|.|||||++|||+.|+.||........    .+-+.+...+      ...++
T Consensus       342 ~--~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk----~eEvdrr~~~------~~~ey  409 (591)
T KOG0986|consen  342 P--IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK----REEVDRRTLE------DPEEY  409 (591)
T ss_pred             c--cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh----HHHHHHHHhc------chhhc
Confidence            4  3344799999999999999999999999999999999999999975421110    0011111111      11245


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCC
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPS  672 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt  672 (702)
                      +...++++..+....|+.||++|.-
T Consensus       410 ~~kFS~eakslc~~LL~Kdp~~RLG  434 (591)
T KOG0986|consen  410 SDKFSEEAKSLCEGLLTKDPEKRLG  434 (591)
T ss_pred             ccccCHHHHHHHHHHHccCHHHhcc
Confidence            6677888889988999999999953

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.97  E-value=2.2e-30  Score=275.60  Aligned_cols=189  Identities=23%  Similarity=0.298  Sum_probs=152.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..++..++||||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus        57 i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~  132 (323)
T cd05595          57 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDG  132 (323)
T ss_pred             CcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCC
Confidence            6778888999999999999999999999887654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++....... .......|++.|+|||++.+..++.++|||||||++|||++|+.||.....   ....    
T Consensus       133 ~~kL~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~---~~~~----  204 (323)
T cd05595         133 HIKITDFGLCKEGISDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERLF----  204 (323)
T ss_pred             CEEecccHHhccccCCC-CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH---HHHH----
Confidence            99999999987532221 122345689999999999988999999999999999999999999964311   1111    


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~  678 (702)
                       ........      ..+......+.+++.+||+.||++||     ++.++++
T Consensus       205 -~~~~~~~~------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         205 -ELILMEEI------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             -HHHhcCCC------CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence             11111111      12233456788999999999999998     7888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.97  E-value=4.5e-30  Score=263.65  Aligned_cols=195  Identities=24%  Similarity=0.358  Sum_probs=155.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++.++..++..++||||+++|+|.+++......+++..+..++.|++.||+|||++   +|+|+||||+||+++.++
T Consensus        61 i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~  137 (256)
T cd05114          61 LVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTG  137 (256)
T ss_pred             ceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCC
Confidence            78888899999999999999999999999976555688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||.+...............++..|+|||.+.+..++.++||||||+++|||++ |+.||.....    ..... 
T Consensus       138 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~----~~~~~-  212 (256)
T cd05114         138 VVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN----YEVVE-  212 (256)
T ss_pred             eEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH----HHHHH-
Confidence            99999999987653322222222335568999999988889999999999999999999 8999964311    11111 


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                         ....+..  .   ..+......+.+++.+||+.+|++||++++++++|.
T Consensus       213 ---~i~~~~~--~---~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         213 ---MISRGFR--L---YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             ---HHHCCCC--C---CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence               1111110  0   111223457899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.97  E-value=5.5e-30  Score=278.97  Aligned_cols=195  Identities=21%  Similarity=0.236  Sum_probs=148.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++++++.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+.   +|+||||||+|||++.++
T Consensus        63 iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~  138 (381)
T cd05626          63 VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDG  138 (381)
T ss_pred             eeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCC
Confidence            8888899999999999999999999999997654 688889999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCC----------------------------------------------ceeeceeccccccCcc
Q 038002          551 RAKISDFGLAKLLMPNQT----------------------------------------------GIVAGVRGSRGYMAPE  584 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~----------------------------------------------~~~~~~~gt~~y~aPE  584 (702)
                      ++||+|||++..+.....                                              .......||+.|+|||
T Consensus       139 ~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE  218 (381)
T cd05626         139 HIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPE  218 (381)
T ss_pred             CEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHH
Confidence            999999999764311000                                              0012356999999999


Q ss_pred             cccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHH--c
Q 038002          585 WQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL--C  662 (702)
Q Consensus       585 ~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--c  662 (702)
                      .+.+..++.++|||||||++|||++|+.||..............      ......  .  ........++.+++.+  |
T Consensus       219 ~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~------~~~~~~--~--~~~~~~s~~~~dli~~ll~  288 (381)
T cd05626         219 VLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVIN------WENTLH--I--PPQVKLSPEAVDLITKLCC  288 (381)
T ss_pred             HHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHc------cccccC--C--CCCCCCCHHHHHHHHHHcc
Confidence            99888899999999999999999999999975421111110000      000000  0  0111234566777776  4


Q ss_pred             ccCCCCCCCCHHHHHHH
Q 038002          663 IQDEPNLRPSMKNVILM  679 (702)
Q Consensus       663 L~~dP~~RPt~~evl~~  679 (702)
                      +..+|..||+++++++.
T Consensus       289 ~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         289 SAEERLGRNGADDIKAH  305 (381)
T ss_pred             CcccccCCCCHHHHhcC
Confidence            56666679999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.97  E-value=5.3e-31  Score=250.96  Aligned_cols=192  Identities=27%  Similarity=0.306  Sum_probs=148.5

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecc
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDF  557 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df  557 (702)
                      .+..||+++|+..|+|.+.+...   +..+++.+++.|+.+|++||++||+. .+.+.||||||.|||+.+.+.++|.||
T Consensus        95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~  173 (302)
T KOG2345|consen   95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDL  173 (302)
T ss_pred             ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEec
Confidence            56799999999999999998754   33589999999999999999999998 223999999999999999999999999


Q ss_pred             cceeecCCCCCc--------eeeceeccccccCccccc---CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          558 GLAKLLMPNQTG--------IVAGVRGSRGYMAPEWQN---SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       558 g~a~~~~~~~~~--------~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                      |.+......-..        .......|..|+|||.+.   +...++++|||||||+||+|+.|..||+..........+
T Consensus       174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL  253 (302)
T KOG2345|consen  174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL  253 (302)
T ss_pred             cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE
Confidence            999765321111        112345799999999764   557789999999999999999999999754222111111


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      ..      ..+.+    .-.-....++.+.+++++||+.||.+||++.+++..++..
T Consensus       254 Av------~n~q~----s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  254 AV------QNAQI----SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             ee------ecccc----ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            10      01111    0011223788999999999999999999999999998865

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.97  E-value=2e-30  Score=276.28  Aligned_cols=190  Identities=22%  Similarity=0.294  Sum_probs=152.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++...+..++..++||||+++|+|.+++.... .+++.++..++.||+.||+|||+ .   +|+||||||+|||++.+
T Consensus        57 i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~  132 (325)
T cd05594          57 LTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKD  132 (325)
T ss_pred             CCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCC
Confidence            6778888999999999999999999999887654 68999999999999999999997 7   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      +.+||+|||++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   +. .   
T Consensus       133 ~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~---~~-~---  204 (325)
T cd05594         133 GHIKITDFGLCKEGIKDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EK-L---  204 (325)
T ss_pred             CCEEEecCCCCeecCCCCc-ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH---HH-H---
Confidence            9999999999875432221 22345689999999999888999999999999999999999999964311   11 0   


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  679 (702)
                       .........      ..+......+.+++.+||+.||++|+     ++.++++.
T Consensus       205 -~~~i~~~~~------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         205 -FELILMEEI------RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             -HHHHhcCCC------CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence             111111111      11223456788999999999999996     89998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=6.8e-30  Score=278.37  Aligned_cols=230  Identities=18%  Similarity=0.119  Sum_probs=169.3

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh---------------------eeeEEEEEecCCeeEEEEecCCCCCHHH
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------ISSLLVYKHRSSKKLLVYEFMSKGSLAD  498 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------i~~l~~~~~~~~~~~lV~e~~~~gsL~~  498 (702)
                      .+...++||+|++  ||++....  ..||+|                     |+++++.+..+...++|||++. ++|.+
T Consensus        93 ~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~  171 (391)
T PHA03212         93 GFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYC  171 (391)
T ss_pred             CcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHH
Confidence            4555677888877  77666543  455555                     8889999999999999999995 68998


Q ss_pred             HhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeeceeccc
Q 038002          499 LLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR  578 (702)
Q Consensus       499 ~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~  578 (702)
                      ++.... .+++.+++.++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++...............||+
T Consensus       172 ~l~~~~-~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~  247 (391)
T PHA03212        172 YLAAKR-NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTI  247 (391)
T ss_pred             HHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCcc
Confidence            887654 688999999999999999999999   9999999999999999999999999999754332222334467999


Q ss_pred             cccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcc----hhhhHHHHHH---------------------h
Q 038002          579 GYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTAD----EVLLSTWVYN---------------------C  633 (702)
Q Consensus       579 ~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~----~~~~~~~~~~---------------------~  633 (702)
                      .|+|||++.+..++.++|||||||++|||++|..||........    ...+......                     .
T Consensus       248 ~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~  327 (391)
T PHA03212        248 ATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIG  327 (391)
T ss_pred             CCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHH
Confidence            99999999888999999999999999999999988754321110    0000000000                     0


Q ss_pred             hhcccccccccc---ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          634 FVAGEFNKLVEE---EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       634 ~~~~~~~~~~~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ............   .........+.+++.+||+.||++|||++|+++
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        328 LAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             HHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence            000000000000   001134567889999999999999999999986

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.1e-30  Score=273.87  Aligned_cols=187  Identities=24%  Similarity=0.265  Sum_probs=151.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+.+++..++||||+++++|.+++...+ .+++..+..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        63 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~  138 (291)
T cd05612          63 IIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEG  138 (291)
T ss_pred             HhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCC
Confidence            5666677778999999999999999999997654 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++......    .....|++.|+|||++.+..++.++||||||+++|||++|+.||.....   . .    .
T Consensus       139 ~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~---~-~----~  206 (291)
T cd05612         139 HIKLTDFGFAKKLRDR----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP---F-G----I  206 (291)
T ss_pred             CEEEEecCcchhccCC----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---H-H----H
Confidence            9999999999865322    2234689999999999988899999999999999999999999965311   0 0    1


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPS-----MKNVILM  679 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~~  679 (702)
                      ......+..      ..+......+.+++.+||+.||.+||+     ++++++.
T Consensus       207 ~~~i~~~~~------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         207 YEKILAGKL------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             HHHHHhCCc------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence            111111111      122233567889999999999999995     8888765

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.97  E-value=4.2e-30  Score=265.04  Aligned_cols=197  Identities=26%  Similarity=0.360  Sum_probs=156.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++..+..++..++||||+++++|.+++.... ..+++..++.++.|+++||+|||++   +++||||||+||+++++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~  140 (263)
T cd05052          64 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN  140 (263)
T ss_pred             hhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCC
Confidence            6777888888999999999999999999997643 3588999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.+||+|||++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.....  ++     
T Consensus       141 ~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~-----  213 (263)
T cd05052         141 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQ-----  213 (263)
T ss_pred             CcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HH-----
Confidence            999999999998764332211122234567999999988889999999999999999998 9999864311  11     


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                       ........ .    ..+.+...+..+.+++.+||+.||++||++.+++++|+.+
T Consensus       214 -~~~~~~~~-~----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         214 -VYELLEKG-Y----RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             -HHHHHHCC-C----CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence             11111111 1    1122233456789999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.96  E-value=3.3e-30  Score=279.83  Aligned_cols=198  Identities=25%  Similarity=0.347  Sum_probs=155.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC----------------------------------------------
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE----------------------------------------------  504 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------------------------------------------  504 (702)
                      |+++++++..++..++||||+++|+|.+++....                                              
T Consensus       101 Iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  180 (375)
T cd05104         101 IVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVP  180 (375)
T ss_pred             eeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccc
Confidence            7888889999999999999999999999986432                                              


Q ss_pred             ----------------------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEec
Q 038002          505 ----------------------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISD  556 (702)
Q Consensus       505 ----------------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D  556 (702)
                                                  ..+++..+..++.||++||+|||++   +|+||||||+||+++.++.+||+|
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~D  257 (375)
T cd05104         181 TKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICD  257 (375)
T ss_pred             cccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEec
Confidence                                        1367788899999999999999999   999999999999999999999999


Q ss_pred             ccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhh
Q 038002          557 FGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCF  634 (702)
Q Consensus       557 fg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~  634 (702)
                      ||++.......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||.......   .....    .
T Consensus       258 fG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~---~~~~~----~  330 (375)
T cd05104         258 FGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS---KFYKM----I  330 (375)
T ss_pred             CccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH---HHHHH----H
Confidence            99998664332211 122335667999999998899999999999999999998 888986431111   11111    1


Q ss_pred             hccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       635 ~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      ..+. ..    ..+.....++.+++.+||+.||++||++.||+++|++.
T Consensus       331 ~~~~-~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         331 KEGY-RM----LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             HhCc-cC----CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            1111 00    11112345788999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.96  E-value=1e-29  Score=271.57  Aligned_cols=197  Identities=20%  Similarity=0.198  Sum_probs=150.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+.++..+++++..++||||+++|+|.+++.+....+++..+..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus        63 i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~  139 (332)
T cd05623          63 ITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNG  139 (332)
T ss_pred             EeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCC
Confidence            67777888999999999999999999999987655789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCccccc-----CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN-----SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                      .+||+|||++...............||+.|+|||++.     ...++.++|||||||++|||++|+.||......   ..
T Consensus       140 ~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~---~~  216 (332)
T cd05623         140 HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV---ET  216 (332)
T ss_pred             CEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH---HH
Confidence            9999999999765433332333457999999999875     346789999999999999999999999643110   01


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNL--RPSMKNVILM  679 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~--RPt~~evl~~  679 (702)
                           ............+ +......+..+.+++.+||..++++  |++++|+++.
T Consensus       217 -----~~~i~~~~~~~~~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         217 -----YGKIMNHKERFQF-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             -----HHHHhCCCccccC-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence                 1111111100001 1111234567788888888654444  6899998876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.96  E-value=9.5e-31  Score=263.50  Aligned_cols=228  Identities=24%  Similarity=0.225  Sum_probs=173.8

Q ss_pred             ccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------eeeEEEEEec--CC---eeEEEEecCC
Q 038002          445 VNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------ISSLLVYKHR--SS---KKLLVYEFMS  492 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------i~~l~~~~~~--~~---~~~lV~e~~~  492 (702)
                      +...+.+|.|+|  ||.|.+..  ..||||                       |++|..+|..  ++   ...||||||+
T Consensus        26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP  105 (364)
T KOG0658|consen   26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP  105 (364)
T ss_pred             EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch
Confidence            445688999999  99998766  789998                       8888866543  22   4568999998


Q ss_pred             CCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC-CcEEEecccceeecCCCCC
Q 038002          493 KGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS-WRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       493 ~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Dfg~a~~~~~~~~  568 (702)
                      . +|.+.++..   +.+++...+.-+..||.+||+|||+.   +|+||||||+|+|+|.+ |.+||+|||.|+.+...+.
T Consensus       106 ~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep  181 (364)
T KOG0658|consen  106 E-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP  181 (364)
T ss_pred             H-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeeccCCC
Confidence            7 999999852   44688888888999999999999999   99999999999999876 8999999999999866655


Q ss_pred             ceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHh--------hh----
Q 038002          569 GIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNC--------FV----  635 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~--------~~----  635 (702)
                      .  .....|+.|+|||.+.+ ..|+.+.||||.||++.||+.|++-|.+.. ..++......+...        +.    
T Consensus       182 n--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s-~~dQL~eIik~lG~Pt~e~I~~mn~~y~  258 (364)
T KOG0658|consen  182 N--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS-SVDQLVEIIKVLGTPTREDIKSMNPNYT  258 (364)
T ss_pred             c--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC-HHHHHHHHHHHhCCCCHHHHhhcCcccc
Confidence            3  44567999999997765 589999999999999999999999998753 22222211111100        00    


Q ss_pred             cccccccccc----ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          636 AGEFNKLVEE----EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       636 ~~~~~~~~~~----~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      +...+.+...    -.......+.++++.++|+++|.+|.++.|++..
T Consensus       259 ~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  259 EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence            0111111111    1234456788999999999999999999998863

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.96  E-value=3.9e-30  Score=273.77  Aligned_cols=185  Identities=22%  Similarity=0.227  Sum_probs=149.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+++.+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus        58 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~  133 (323)
T cd05575          58 LVGLHYSFQTADKLYFVLDYVNGGELFFHLQRER-SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQG  133 (323)
T ss_pred             CCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCC
Confidence            6778888899999999999999999999997654 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++...... ........||+.|+|||.+.+..++.++|||||||++|||++|+.||.....   ..     .
T Consensus       134 ~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~---~~-----~  204 (323)
T cd05575         134 HVVLTDFGLCKEGIEH-SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT---AE-----M  204 (323)
T ss_pred             cEEEeccCCCcccccC-CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH---HH-----H
Confidence            9999999998753222 1223345689999999999988999999999999999999999999964311   10     1


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMK  674 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~  674 (702)
                      .........      .........+.+++.+||+.||++||++.
T Consensus       205 ~~~i~~~~~------~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         205 YDNILNKPL------RLKPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             HHHHHcCCC------CCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            111111111      11223466788999999999999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.96  E-value=5.3e-30  Score=277.31  Aligned_cols=195  Identities=19%  Similarity=0.234  Sum_probs=147.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++++...|+||||+++|+|.+++.+.. .+++.++..++.|++.||+|||++   +|+||||||+|||++.++
T Consensus        63 iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~  138 (363)
T cd05628          63 VVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKG  138 (363)
T ss_pred             cceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCC
Confidence            6778888999999999999999999999997654 789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCC----------------------------------ceeeceeccccccCcccccCCCCCcccc
Q 038002          551 RAKISDFGLAKLLMPNQT----------------------------------GIVAGVRGSRGYMAPEWQNSGLITVKSD  596 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~D  596 (702)
                      .+||+|||+++.+.....                                  .......||+.|+|||++.+..++.++|
T Consensus       139 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~D  218 (363)
T cd05628         139 HVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCD  218 (363)
T ss_pred             CEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchh
Confidence            999999999875432110                                  0012356999999999999889999999


Q ss_pred             ccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHccc--CCCCCCCCHH
Q 038002          597 VYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQ--DEPNLRPSMK  674 (702)
Q Consensus       597 iwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~--~dP~~RPt~~  674 (702)
                      ||||||++|||++|+.||.......        ....+........+.+.  ....+.+.+++.+++.  .++..||+++
T Consensus       219 vwSlGvil~ell~G~~Pf~~~~~~~--------~~~~i~~~~~~~~~p~~--~~~s~~~~~li~~l~~~~~~r~~r~~~~  288 (363)
T cd05628         219 WWSLGVIMYEMLIGYPPFCSETPQE--------TYKKVMNWKETLIFPPE--VPISEKAKDLILRFCCEWEHRIGAPGVE  288 (363)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCHHH--------HHHHHHcCcCcccCCCc--CCCCHHHHHHHHHHcCChhhcCCCCCHH
Confidence            9999999999999999996542111        11111111000011111  1124456666666543  3344568999


Q ss_pred             HHHHH
Q 038002          675 NVILM  679 (702)
Q Consensus       675 evl~~  679 (702)
                      ||++.
T Consensus       289 ei~~h  293 (363)
T cd05628         289 EIKTN  293 (363)
T ss_pred             HHhCC
Confidence            99875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.96  E-value=1.7e-30  Score=275.11  Aligned_cols=224  Identities=22%  Similarity=0.289  Sum_probs=177.7

Q ss_pred             cceEEEeEE--EEEeeeehhhhHhh-----------------------------eeeEEEEEecCCeeEEEEecCCCCCH
Q 038002          448 KRKLLTVLA--GCLGSITFLCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEFMSKGSL  496 (702)
Q Consensus       448 ~~~l~~g~~--v~~~~~~~~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~~~~gsL  496 (702)
                      ..+||+|.|  ||+|.... .||||                             |+-+++++-+... .||+.+|+|-+|
T Consensus       397 ~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSL  474 (678)
T KOG0193|consen  397 GERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSL  474 (678)
T ss_pred             cceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchh
Confidence            357999998  88887653 35555                             6767788877777 999999999999


Q ss_pred             HHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCC-CCceeecee
Q 038002          497 ADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN-QTGIVAGVR  575 (702)
Q Consensus       497 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~  575 (702)
                      ..+|+..+.+++....+.|++||++|+.|||.+   +|||+|||..||++.++++|||+|||++..-..- .........
T Consensus       475 Y~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~  551 (678)
T KOG0193|consen  475 YTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPH  551 (678)
T ss_pred             hhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCc
Confidence            999999888899999999999999999999999   9999999999999999999999999999764332 222334566


Q ss_pred             ccccccCcccccC---CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHH
Q 038002          576 GSRGYMAPEWQNS---GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL  652 (702)
Q Consensus       576 gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  652 (702)
                      |..-|||||+++.   .+|+..+||||||+++|||++|..||...  ..+++...      .-++.+..-+. .......
T Consensus       552 gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~--~~dqIifm------VGrG~l~pd~s-~~~s~~p  622 (678)
T KOG0193|consen  552 GSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ--NRDQIIFM------VGRGYLMPDLS-KIRSNCP  622 (678)
T ss_pred             cchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC--ChhheEEE------ecccccCccch-hhhccCH
Confidence            8889999998863   47899999999999999999999999732  22222111      11111111000 2234556


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          653 ERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       653 ~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      .++.+|+..||..++++||.+.+|+.+|+.+..
T Consensus       623 k~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  623 KAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             HHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            788999999999999999999999999988765

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.96  E-value=4.3e-30  Score=272.50  Aligned_cols=189  Identities=24%  Similarity=0.317  Sum_probs=151.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+++++..++||||+++|+|.+++.... .+++.++..++.|++.||+|||++   +|+||||||+||+++.++
T Consensus        58 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~  133 (316)
T cd05619          58 LTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCH-KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDG  133 (316)
T ss_pred             CcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCC
Confidence            6778888999999999999999999999997653 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ...     
T Consensus       134 ~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---~~~-----  204 (316)
T cd05619         134 HIKIADFGMCKENMLGD-AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE---EEL-----  204 (316)
T ss_pred             CEEEccCCcceECCCCC-CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH---HHH-----
Confidence            99999999987542221 123345689999999999988999999999999999999999999964311   111     


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMK-NVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~-evl~  678 (702)
                      ........      ...+......+.+++.+||+.||++||++. ++++
T Consensus       205 ~~~i~~~~------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         205 FQSIRMDN------PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             HHHHHhCC------CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            11111110      111223456788999999999999999997 5543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.96  E-value=8e-30  Score=265.78  Aligned_cols=197  Identities=25%  Similarity=0.379  Sum_probs=158.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                      |++++.++...+..+++|||+++++|.+++....               ..+++.++..++.|++.||+|||++   +++
T Consensus        70 i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~  146 (283)
T cd05048          70 IVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFV  146 (283)
T ss_pred             cceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence            7788888889999999999999999999997542               3477889999999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcC
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSN  613 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~P  613 (702)
                      |+||||+||++++++.+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |..|
T Consensus       147 H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p  226 (283)
T cd05048         147 HRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQP  226 (283)
T ss_pred             ccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999986533221 12233456788999999988889999999999999999998 9999


Q ss_pred             CcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          614 FEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       614 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      |......  +      ....+..+...     ..+...+.++.+++.+||+.||++||+++||+++|+++
T Consensus       227 ~~~~~~~--~------~~~~i~~~~~~-----~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         227 YYGFSNQ--E------VIEMIRSRQLL-----PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             CCCCCHH--H------HHHHHHcCCcC-----CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence            9643211  1      11111222111     12334567899999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.96  E-value=1.2e-29  Score=270.99  Aligned_cols=197  Identities=19%  Similarity=0.192  Sum_probs=151.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+++++..|+||||+++|+|.+++......+++..+..++.|++.||+|||++   +|+||||||+||+++.++
T Consensus        63 i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~  139 (331)
T cd05624          63 ITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNG  139 (331)
T ss_pred             EeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCC
Confidence            67788889999999999999999999999987655789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC-----CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-----GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                      .+||+|||++...............|++.|+|||++.+     ..++.++||||||+++|||++|+.||......   . 
T Consensus       140 ~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~---~-  215 (331)
T cd05624         140 HIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV---E-  215 (331)
T ss_pred             CEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH---H-
Confidence            99999999998765443333334569999999998865     46788999999999999999999999643111   0 


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNL--RPSMKNVILM  679 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~--RPt~~evl~~  679 (702)
                          .............+.. .....++.+.+++.+||..++++  |++++++++.
T Consensus       216 ----~~~~i~~~~~~~~~p~-~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         216 ----TYGKIMNHEERFQFPS-HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             ----HHHHHHcCCCcccCCC-ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence                1111111110000111 11224567888899999866544  4678888764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=9.4e-31  Score=275.34  Aligned_cols=192  Identities=23%  Similarity=0.344  Sum_probs=163.8

Q ss_pred             eeeEEEEEecCCe-eEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHRSSK-KLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~~~~-~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |+.+...|..++. .+|||+|++||+|.+.|.+.+ ..++++.+..++.|++.|+.|||++   .|+|||||+.||++..
T Consensus        65 iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk  141 (426)
T KOG0589|consen   65 IVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTK  141 (426)
T ss_pred             eeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccc
Confidence            8888888888887 999999999999999998876 4588999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      ++.|||.|||+|+.+.... .......||+.|+.||++.+.+|..|+|||||||++|||++-+++|.......    +  
T Consensus       142 ~~~VkLgDfGlaK~l~~~~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~----L--  214 (426)
T KOG0589|consen  142 DKKVKLGDFGLAKILNPED-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE----L--  214 (426)
T ss_pred             cCceeecchhhhhhcCCch-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH----H--
Confidence            9999999999999886544 23456789999999999999999999999999999999999999997552211    1  


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                        ...+.+.     .-..++..++.++..++..||+.+|+.||++.+++.+
T Consensus       215 --i~ki~~~-----~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  215 --ILKINRG-----LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             --HHHHhhc-----cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence              1111111     1234566788899999999999999999999999875

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.96  E-value=5.2e-30  Score=276.06  Aligned_cols=166  Identities=27%  Similarity=0.262  Sum_probs=144.6

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------------eeeEEEEEecCCeeEEE
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      ++.....||+|.|  |.++....  +.||||                                +++++++|...++.|||
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciV  266 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIV  266 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeee
Confidence            4556678999999  77777665  788988                                89999999999999999


Q ss_pred             EecCCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC--cEEEecccceeecC
Q 038002          488 YEFMSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW--RAKISDFGLAKLLM  564 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~--~~kl~Dfg~a~~~~  564 (702)
                      +|.+.. +|.++|+...- .++...++.|+.||+.||.+||+.   +|||+|||||||||.+-.  .+||+|||.+....
T Consensus       267 fELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~  342 (586)
T KOG0667|consen  267 FELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES  342 (586)
T ss_pred             ehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccccccC
Confidence            999954 99999987653 488999999999999999999999   999999999999995543  69999999998653


Q ss_pred             CCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCC
Q 038002          565 PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVN  617 (702)
Q Consensus       565 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~  617 (702)
                      ..    ......++.|+|||++.+.+|+.+.||||||||+.||++|.+.|.+.
T Consensus       343 q~----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~  391 (586)
T KOG0667|consen  343 QR----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD  391 (586)
T ss_pred             Cc----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence            22    23566789999999999999999999999999999999998888655

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.96  E-value=8.2e-30  Score=261.92  Aligned_cols=195  Identities=24%  Similarity=0.356  Sum_probs=156.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++...+..++||||+++++|.+++......+++.+++.++.||+.||+|||+.   +++|+||||+||+++.++
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~  137 (256)
T cd05113          61 LVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQG  137 (256)
T ss_pred             eeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCC
Confidence            78888889889999999999999999999987655789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||.++..............++..|+|||.+.+..++.++||||||+++|||++ |..||......    .    
T Consensus       138 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~----~----  209 (256)
T cd05113         138 CVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS----E----  209 (256)
T ss_pred             CEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH----H----
Confidence            99999999988664333222222345678999999988889999999999999999998 99998643211    0    


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                      .......+...     ..+......+.+++.+||+.+|++||++.+|++.|+
T Consensus       210 ~~~~~~~~~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         210 TVEKVSQGLRL-----YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHhcCCCC-----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            11111111111     111223578899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.1e-29  Score=261.49  Aligned_cols=196  Identities=25%  Similarity=0.370  Sum_probs=156.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++.++..++..++||||+++++|.+++.... ..+++.++..++.|++.||.+||+.   +|+|+||||+||+++++
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~  139 (261)
T cd05068          63 LIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGEN  139 (261)
T ss_pred             ccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCC
Confidence            7778888899999999999999999999997654 4588999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.+||+|||++................+..|+|||.+.+..++.++||||||+++|||++ |+.||....   ....   
T Consensus       140 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~---~~~~---  213 (261)
T cd05068         140 NICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT---NAEV---  213 (261)
T ss_pred             CCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC---HHHH---
Confidence            999999999998765322211222223457999999988889999999999999999999 999996431   1111   


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                        ....... ..    ...+......+.+++.+||+.+|++||+++++++.||.
T Consensus       214 --~~~~~~~-~~----~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         214 --LQQVDQG-YR----MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             --HHHHHcC-CC----CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence              1111111 00    11122345678999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.96  E-value=7e-30  Score=272.10  Aligned_cols=188  Identities=21%  Similarity=0.213  Sum_probs=151.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++.++..++||||+++|+|..++.... .+++.++..++.||+.||+|||+.   ||+||||||+|||++.++
T Consensus        58 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~  133 (325)
T cd05604          58 LVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRER-SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQG  133 (325)
T ss_pred             CccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCC
Confidence            7788889999999999999999999999887654 789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++...... ........|++.|+|||.+.+..++.++|||||||++|||++|..||.....   ..     .
T Consensus       134 ~~kL~DfG~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---~~-----~  204 (325)
T cd05604         134 HVVLTDFGLCKEGIAQ-SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV---AE-----M  204 (325)
T ss_pred             CEEEeecCCcccCCCC-CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH---HH-----H
Confidence            9999999998753221 1223346689999999999998999999999999999999999999964311   11     1


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVI  677 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl  677 (702)
                      .........      ...+.....+.+++.+||+.+|.+||++.+.+
T Consensus       205 ~~~~~~~~~------~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~  245 (325)
T cd05604         205 YDNILHKPL------VLRPGASLTAWSILEELLEKDRQRRLGAKEDF  245 (325)
T ss_pred             HHHHHcCCc------cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence            111111111      11223456778899999999999999886433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.96  E-value=3.8e-30  Score=274.15  Aligned_cols=189  Identities=22%  Similarity=0.267  Sum_probs=151.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++.++..++||||+++++|.+++.... .+.+..+..++.||++||+|||++   ||+||||||+|||++.++
T Consensus        58 Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~  133 (325)
T cd05602          58 LVGLHFSFQTADKLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQG  133 (325)
T ss_pred             CCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCC
Confidence            7788889999999999999999999999997654 678888889999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|..||.....   ...     
T Consensus       134 ~~kl~DfG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~-----  204 (325)
T cd05602         134 HIVLTDFGLCKENIEHN-GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT---AEM-----  204 (325)
T ss_pred             CEEEccCCCCcccccCC-CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH---HHH-----
Confidence            99999999987542222 223346789999999999998999999999999999999999999964311   111     


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .........      .........+.+++.+||+.||.+||++.+.+.
T Consensus       205 ~~~i~~~~~------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~  246 (325)
T cd05602         205 YDNILNKPL------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM  246 (325)
T ss_pred             HHHHHhCCc------CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence            111111111      122234567889999999999999999875443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.96  E-value=4e-30  Score=264.78  Aligned_cols=194  Identities=29%  Similarity=0.415  Sum_probs=149.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++++.+.+..++||||+++|+|.++|... ...+++.++..|+.||++||+|||++   +++|++|+++||+++++
T Consensus        63 i~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~  139 (259)
T PF07714_consen   63 IVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSN  139 (259)
T ss_dssp             BE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccc
Confidence            899999999888899999999999999999887 55799999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhH
Q 038002          550 WRAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~  627 (702)
                      +.+||+|||++........ ...........|+|||.+....++.++||||||+++|||++ |+.||...  .  .... 
T Consensus       140 ~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--~--~~~~-  214 (259)
T PF07714_consen  140 GQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--D--NEEI-  214 (259)
T ss_dssp             TEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--C--HHHH-
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--c--cccc-
Confidence            9999999999987632222 12233456778999999988889999999999999999999 78888543  1  1111 


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML  680 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  680 (702)
                         ......+...     ..+...+..+.+++.+||+.||++||++++|++.|
T Consensus       215 ---~~~~~~~~~~-----~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  215 ---IEKLKQGQRL-----PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             ---HHHHHTTEET-----TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ---cccccccccc-----eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence               1111122111     11223456788999999999999999999999987

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.96  E-value=9.5e-31  Score=248.23  Aligned_cols=192  Identities=20%  Similarity=0.266  Sum_probs=156.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC-
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS-  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~-  549 (702)
                      |++|.....+++..|||+|+|.|++|..-|-.. .-.++..+-..++||+++|.|+|.+   +|||||+||+|+++... 
T Consensus        72 IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~  147 (355)
T KOG0033|consen   72 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKA  147 (355)
T ss_pred             EeehhhhhcccceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeecc
Confidence            888888888899999999999999998776544 2578888899999999999999999   99999999999999443 


Q ss_pred             --CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          550 --WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       550 --~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                        .-+||+|||+|..+.  .........|||+|+|||+++..+|+..+|||+.|||||-|+.|..||....    +.   
T Consensus       148 ~~A~vKL~~FGvAi~l~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~----~~---  218 (355)
T KOG0033|consen  148 KGAAVKLADFGLAIEVN--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED----QH---  218 (355)
T ss_pred             CCCceeecccceEEEeC--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc----HH---
Confidence              359999999999876  3334556789999999999999999999999999999999999999997531    11   


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       .+++.+..+...-  +...-....+...+|+.+||..||.+|.|+.|.++
T Consensus       219 -rlye~I~~g~yd~--~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  219 -RLYEQIKAGAYDY--PSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             -HHHHHHhccccCC--CCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence             2344444443321  12223345778899999999999999999998775

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.96  E-value=5.3e-30  Score=272.12  Aligned_cols=189  Identities=22%  Similarity=0.297  Sum_probs=153.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.++..++.++||||+++++|.+++.... .+++.++..++.||+.||+|||+.   +|+||||||+||+++.++
T Consensus        58 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~  133 (318)
T cd05570          58 LTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEG  133 (318)
T ss_pred             ccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCC
Confidence            6778888999999999999999999999987654 789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++....... .......|++.|+|||++.+..++.++|||||||++|+|++|+.||....   ...     .
T Consensus       134 ~~kl~Dfg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~---~~~-----~  204 (318)
T cd05570         134 HIKIADFGMCKEGILGG-VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD---EDE-----L  204 (318)
T ss_pred             cEEecccCCCeecCcCC-CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC---HHH-----H
Confidence            99999999987532222 12234568999999999999999999999999999999999999996431   111     1


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSM-----KNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~-----~evl~  678 (702)
                      .........      ..+......+.+++.+||+.||++||++     .++++
T Consensus       205 ~~~i~~~~~------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         205 FQSILEDEV------RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             HHHHHcCCC------CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence            111111111      1122345678899999999999999999     77765

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.96  E-value=7.9e-30  Score=261.94  Aligned_cols=195  Identities=25%  Similarity=0.372  Sum_probs=155.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++.++...+..++||||+++++|.+++......+++..+..++.|++.||+|||+.   +|+|+||||+||+++.++
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~  137 (256)
T cd05059          61 LVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDN  137 (256)
T ss_pred             EEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCC
Confidence            77888888999999999999999999999987655789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||+++..............++..|+|||.+.+..++.++||||||+++|||++ |..||......  +  ..  
T Consensus       138 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~--~~--  211 (256)
T cd05059         138 VVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--E--VV--  211 (256)
T ss_pred             cEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--H--HH--
Confidence            99999999988654322211122223457999999988889999999999999999999 89999643111  1  11  


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                        ......     .....+...+..+.+++.+||+.+|++|||++|+++.|.
T Consensus       212 --~~~~~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~  256 (256)
T cd05059         212 --ESVSAG-----YRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT  256 (256)
T ss_pred             --HHHHcC-----CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence              111111     011112234668999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.96  E-value=4e-30  Score=283.96  Aligned_cols=225  Identities=26%  Similarity=0.320  Sum_probs=187.0

Q ss_pred             ccceEEEeEE--EEEeeeeh-------hhhHhh----------------------------eeeEEEEEecCCeeEEEEe
Q 038002          447 DKRKLLTVLA--GCLGSITF-------LCFLIA----------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~~-------~~~avk----------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      .+++||+|.|  ||+|....       ..||||                            |++|++.+.+++..++|+|
T Consensus       490 ~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFE  569 (774)
T KOG1026|consen  490 FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFE  569 (774)
T ss_pred             ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEE
Confidence            3578999999  88887654       578998                            9999999999999999999


Q ss_pred             cCCCCCHHHHhhcCC-------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEec
Q 038002          490 FMSKGSLADLLFNLE-------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISD  556 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~-------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D  556 (702)
                      ||..|||.+||....             ..++..+.+.|+.|||.|++||-++   .+|||||-..|.||.++..|||+|
T Consensus       570 Ym~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~VKIsD  646 (774)
T KOG1026|consen  570 YMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVVKISD  646 (774)
T ss_pred             ecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEEEecc
Confidence            999999999997432             1267889999999999999999999   999999999999999999999999


Q ss_pred             ccceeecCCCCCceee-ceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhh
Q 038002          557 FGLAKLLMPNQTGIVA-GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCF  634 (702)
Q Consensus       557 fg~a~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~  634 (702)
                      ||+++.+-........ .-.-..+|||||.+..++++.++|||||||+|||+++ |+.|+......        .+.+.+
T Consensus       647 fGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~--------EVIe~i  718 (774)
T KOG1026|consen  647 FGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ--------EVIECI  718 (774)
T ss_pred             cccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH--------HHHHHH
Confidence            9999876544433322 3345678999999999999999999999999999998 89999754211        133334


Q ss_pred             hccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCC
Q 038002          635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP  687 (702)
Q Consensus       635 ~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~  687 (702)
                      ..+.+.     +.+...+.++.+||..||+.+|.+||++.||-.+|+...+..
T Consensus       719 ~~g~lL-----~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s  766 (774)
T KOG1026|consen  719 RAGQLL-----SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS  766 (774)
T ss_pred             HcCCcc-----cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence            444441     335567789999999999999999999999999999876544

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.96  E-value=1.6e-29  Score=274.00  Aligned_cols=194  Identities=21%  Similarity=0.214  Sum_probs=152.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+++++..++||||+++|+|.+++...  .+++..+..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus       105 iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~  179 (370)
T cd05596         105 IVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSG  179 (370)
T ss_pred             cceEEEEEecCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCC
Confidence            777888899999999999999999999998653  578888999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCC----CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG----LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                      .+||+|||++...............||+.|+|||++.+.    .++.++|||||||++|||++|+.||......   .  
T Consensus       180 ~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~---~--  254 (370)
T cd05596         180 HLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV---G--  254 (370)
T ss_pred             CEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH---H--
Confidence            999999999987643332223345799999999987643    4789999999999999999999999754211   1  


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNL--RPSMKNVILM  679 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~--RPt~~evl~~  679 (702)
                         .+..+.........  ......+..+.+++.+||+.+|++  ||+++|+++.
T Consensus       255 ---~~~~i~~~~~~~~~--~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         255 ---TYSKIMDHKNSLTF--PDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             ---HHHHHHcCCCcCCC--CCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence               11111111100000  111234678889999999999988  9999999764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.96  E-value=1.5e-29  Score=261.37  Aligned_cols=197  Identities=24%  Similarity=0.328  Sum_probs=158.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..++..++||||+++++|.+++......+++.++..++.|++.||+|||++   +|+|+||||+||++++++
T Consensus        67 i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~  143 (266)
T cd05033          67 IIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNL  143 (266)
T ss_pred             cceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCC
Confidence            77888888899999999999999999999987666789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          551 RAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      .++|+|||++......... ......++..|+|||.+.+..++.++||||||+++|||++ |..||.....   . ... 
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~---~-~~~-  218 (266)
T cd05033         144 VCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN---Q-DVI-  218 (266)
T ss_pred             CEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH---H-HHH-
Confidence            9999999999877422221 1112334678999999988889999999999999999998 9999854311   1 111 


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                         ........     ...+...+..+.+++.+||+.+|++||+++||+++|+++
T Consensus       219 ---~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         219 ---KAVEDGYR-----LPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             ---HHHHcCCC-----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence               11111100     011223456789999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=5e-30  Score=260.84  Aligned_cols=219  Identities=19%  Similarity=0.156  Sum_probs=174.8

Q ss_pred             ccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEec
Q 038002          445 VNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      ++..++||.|..  ||++.+..  ..+|+|                              +..|+..|+.++..+|||||
T Consensus        79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~mey  158 (459)
T KOG0610|consen   79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEY  158 (459)
T ss_pred             HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEec
Confidence            445577888755  88888876  667776                              78899999999999999999


Q ss_pred             CCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCC----
Q 038002          491 MSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP----  565 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~----  565 (702)
                      |+||+|..+++++.. .+++..++-++.+++-||+|||..   |||.||||||||||.++|++.|+||.++.....    
T Consensus       159 CpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~  235 (459)
T KOG0610|consen  159 CPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTL  235 (459)
T ss_pred             CCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCCCee
Confidence            999999999988754 489999999999999999999999   999999999999999999999999998754310    


Q ss_pred             -----------------------------C-CC---------------------ceeeceeccccccCcccccCCCCCcc
Q 038002          566 -----------------------------N-QT---------------------GIVAGVRGSRGYMAPEWQNSGLITVK  594 (702)
Q Consensus       566 -----------------------------~-~~---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~  594 (702)
                                                   . ..                     .....++||-.|+|||++++...+.+
T Consensus       236 ~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsA  315 (459)
T KOG0610|consen  236 VKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSA  315 (459)
T ss_pred             eccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCch
Confidence                                         0 00                     01123669999999999999999999


Q ss_pred             ccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCC--
Q 038002          595 SDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPS--  672 (702)
Q Consensus       595 ~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt--  672 (702)
                      +|+|+|||++|||+.|..||.+....+   .+...+.+     ..    .-.-.+..+..+.+||+++|.+||.+|.-  
T Consensus       316 VDWWtfGIflYEmLyG~TPFKG~~~~~---Tl~NIv~~-----~l----~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~  383 (459)
T KOG0610|consen  316 VDWWTFGIFLYEMLYGTTPFKGSNNKE---TLRNIVGQ-----PL----KFPEEPEVSSAAKDLIRKLLVKDPSKRLGSK  383 (459)
T ss_pred             hhHHHHHHHHHHHHhCCCCcCCCCchh---hHHHHhcC-----CC----cCCCCCcchhHHHHHHHHHhccChhhhhccc
Confidence            999999999999999999998763322   12221111     11    00112256788999999999999999988  


Q ss_pred             --HHHHHH
Q 038002          673 --MKNVIL  678 (702)
Q Consensus       673 --~~evl~  678 (702)
                        +.||-+
T Consensus       384 rGA~eIK~  391 (459)
T KOG0610|consen  384 RGAAEIKR  391 (459)
T ss_pred             cchHHhhc
Confidence              777765

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=6.8e-30  Score=276.61  Aligned_cols=194  Identities=19%  Similarity=0.198  Sum_probs=150.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+++++..++||||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus        63 iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~  138 (364)
T cd05599          63 VVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKG  138 (364)
T ss_pred             CcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCC
Confidence            7778889999999999999999999999997654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCc-------------------------------------eeeceeccccccCcccccCCCCCc
Q 038002          551 RAKISDFGLAKLLMPNQTG-------------------------------------IVAGVRGSRGYMAPEWQNSGLITV  593 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~  593 (702)
                      .+||+|||++..+......                                     ......||+.|+|||++....++.
T Consensus       139 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  218 (364)
T cd05599         139 HIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNK  218 (364)
T ss_pred             CEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCC
Confidence            9999999998764321100                                     011245899999999998889999


Q ss_pred             cccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCC-
Q 038002          594 KSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPS-  672 (702)
Q Consensus       594 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt-  672 (702)
                      ++|||||||++|||++|..||......  + ..     ..............  ....++.+.+++.+|+. +|.+|++ 
T Consensus       219 ~~DiwSlG~il~el~~G~~Pf~~~~~~--~-~~-----~~i~~~~~~~~~~~--~~~~s~~~~~li~~ll~-~p~~R~~~  287 (364)
T cd05599         219 ECDWWSLGVIMYEMLVGYPPFCSDNPQ--E-TY-----RKIINWKETLQFPD--EVPLSPEAKDLIKRLCC-EAERRLGN  287 (364)
T ss_pred             eeeeecchhHHHHhhcCCCCCCCCCHH--H-HH-----HHHHcCCCccCCCC--CCCCCHHHHHHHHHHcc-CHhhcCCC
Confidence            999999999999999999999644211  0 00     11111000000011  11235677888888997 9999998 


Q ss_pred             --HHHHHHH
Q 038002          673 --MKNVILM  679 (702)
Q Consensus       673 --~~evl~~  679 (702)
                        ++|+++.
T Consensus       288 ~~~~~ll~h  296 (364)
T cd05599         288 NGVNEIKSH  296 (364)
T ss_pred             CCHHHHhcC
Confidence              8888763

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=8.1e-30  Score=271.32  Aligned_cols=189  Identities=22%  Similarity=0.250  Sum_probs=153.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..++..|+||||+++++|.+++.... .+.+..+..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus        62 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~  137 (323)
T cd05584          62 IVDLIYAFQTGGKLYLILEYLSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQG  137 (323)
T ss_pred             hhceeeEEecCCeEEEEEeCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCC
Confidence            7788888999999999999999999999997654 678888999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||+++....... ......|++.|+|||++.+..++.++||||||+++|||++|+.||.....   ..     .
T Consensus       138 ~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~---~~-----~  208 (323)
T cd05584         138 HVKLTDFGLCKESIHEGT-VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR---KK-----T  208 (323)
T ss_pred             CEEEeeCcCCeecccCCC-cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH---HH-----H
Confidence            999999999875432222 22345689999999999888899999999999999999999999965321   11     1


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~  678 (702)
                      ......+..      ..+......+.+++.+||+.||++||     +++++++
T Consensus       209 ~~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         209 IDKILKGKL------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HHHHHcCCC------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            111111111      12233456788999999999999999     7888766

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.96  E-value=1.1e-29  Score=273.86  Aligned_cols=190  Identities=25%  Similarity=0.335  Sum_probs=146.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++++++.++..++||||+++++|.+..     ...+..+..++.||+.||+|||++   +|+||||||+|||+++++
T Consensus       134 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~  205 (353)
T PLN00034        134 VVKCHDMFDHNGEIQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAK  205 (353)
T ss_pred             cceeeeEeccCCeEEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCC
Confidence            778888899999999999999999986532     356778889999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC-----CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-----GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                      .+||+|||++..+..... ......|+..|+|||.+..     ...+.++|||||||++|||++|+.||...........
T Consensus       206 ~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~  284 (353)
T PLN00034        206 NVKIADFGVSRILAQTMD-PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASL  284 (353)
T ss_pred             CEEEcccccceecccccc-cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHH
Confidence            999999999987643221 1234568999999998743     2345689999999999999999999974321111111


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ...     ....     ............+.+++.+||+.||++||+++|+++.
T Consensus       285 ~~~-----~~~~-----~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        285 MCA-----ICMS-----QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             HHH-----Hhcc-----CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            000     0000     0112233456678999999999999999999999985

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.96  E-value=8.8e-30  Score=277.57  Aligned_cols=193  Identities=19%  Similarity=0.213  Sum_probs=146.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+++++..|+||||+++|+|.+++.+.. .+++..+..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus        63 iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g  138 (382)
T cd05625          63 VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDG  138 (382)
T ss_pred             CCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCC
Confidence            7888899999999999999999999999997654 688899999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCC----------------------------------------------CceeeceeccccccCcc
Q 038002          551 RAKISDFGLAKLLMPNQ----------------------------------------------TGIVAGVRGSRGYMAPE  584 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~----------------------------------------------~~~~~~~~gt~~y~aPE  584 (702)
                      .+||+|||++..+....                                              ........||+.|+|||
T Consensus       139 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE  218 (382)
T cd05625         139 HIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPE  218 (382)
T ss_pred             CEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHH
Confidence            99999999975321000                                              00012346899999999


Q ss_pred             cccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHccc
Q 038002          585 WQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQ  664 (702)
Q Consensus       585 ~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~  664 (702)
                      ++.+..++.++|||||||++|||++|+.||.............    .  ......    ........+.+.+++.+|+.
T Consensus       219 ~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~----~--~~~~~~----~p~~~~~s~~~~~li~~l~~  288 (382)
T cd05625         219 VLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVI----N--WQTSLH----IPPQAKLSPEASDLIIKLCR  288 (382)
T ss_pred             HhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHH----c--cCCCcC----CCCcccCCHHHHHHHHHHcc
Confidence            9998899999999999999999999999997542111100000    0  000000    01112234566677777664


Q ss_pred             CCCCCCCC---HHHHHH
Q 038002          665 DEPNLRPS---MKNVIL  678 (702)
Q Consensus       665 ~dP~~RPt---~~evl~  678 (702)
                       +|++|++   ++|+++
T Consensus       289 -~p~~R~~~~~~~ei~~  304 (382)
T cd05625         289 -GPEDRLGKNGADEIKA  304 (382)
T ss_pred             -CHhHcCCCCCHHHHhc
Confidence             9999997   777765

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.96  E-value=6.3e-30  Score=273.62  Aligned_cols=200  Identities=25%  Similarity=0.368  Sum_probs=154.1

Q ss_pred             eeeEEEEE-ecCCeeEEEEecCCCCCHHHHhhcCC---------------------------------------------
Q 038002          471 ISSLLVYK-HRSSKKLLVYEFMSKGSLADLLFNLE---------------------------------------------  504 (702)
Q Consensus       471 i~~l~~~~-~~~~~~~lV~e~~~~gsL~~~l~~~~---------------------------------------------  504 (702)
                      |+++++.+ ..+...++||||+++++|.+++....                                             
T Consensus        73 iv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (337)
T cd05054          73 VVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKS  152 (337)
T ss_pred             hhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcc
Confidence            55565544 45677899999999999999986432                                             


Q ss_pred             ---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          505 ---------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       505 ---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                                     ..+++..+..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++..+......
T Consensus       153 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~  229 (337)
T cd05054         153 LSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY  229 (337)
T ss_pred             hhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcch
Confidence                           1468889999999999999999999   9999999999999999999999999999876433221


Q ss_pred             e-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          570 I-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       570 ~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                      . .....++..|+|||++.+..++.++|||||||++|||++ |..||.......   .+    ......+..     ...
T Consensus       230 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~---~~----~~~~~~~~~-----~~~  297 (337)
T cd05054         230 VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE---EF----CRRLKEGTR-----MRA  297 (337)
T ss_pred             hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH---HH----HHHHhccCC-----CCC
Confidence            1 223445678999999999999999999999999999998 999996431111   11    111111111     111


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      +......+.+++.+||+.+|++||+++||+++|+.+.+
T Consensus       298 ~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         298 PEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            22345678999999999999999999999999997653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.96  E-value=1.2e-29  Score=274.70  Aligned_cols=221  Identities=18%  Similarity=0.162  Sum_probs=166.3

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEe
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      .++..+.||+|++  ||++....  ..+|+|                              |++++..+++++..|+|||
T Consensus        44 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~E  123 (370)
T cd05621          44 DYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVME  123 (370)
T ss_pred             HCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEc
Confidence            4455567888877  66665432  334443                              7788889999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      |+++|+|.+++...  .+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||++.........
T Consensus       124 y~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~  198 (370)
T cd05621         124 YMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV  198 (370)
T ss_pred             CCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecccCCce
Confidence            99999999999654  578899999999999999999999   9999999999999999999999999999876433322


Q ss_pred             eeeceeccccccCcccccCC----CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccc
Q 038002          570 IVAGVRGSRGYMAPEWQNSG----LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE  645 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  645 (702)
                      ......||+.|+|||++.+.    .++.++|||||||++|||++|+.||.....   ...     ...+.........  
T Consensus       199 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~---~~~-----~~~i~~~~~~~~~--  268 (370)
T cd05621         199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL---VGT-----YSKIMDHKNSLNF--  268 (370)
T ss_pred             ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH---HHH-----HHHHHhCCcccCC--
Confidence            23456799999999988653    378899999999999999999999965421   111     1111111100000  


Q ss_pred             ccCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 038002          646 EVDKITLERMVKTGLLCIQDEPNL--RPSMKNVILM  679 (702)
Q Consensus       646 ~~~~~~~~~l~~li~~cL~~dP~~--RPt~~evl~~  679 (702)
                      ......+..+.+++.+||+.++.+  ||+++|+++.
T Consensus       269 p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         269 PEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             CCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            111234667788888899865544  8899999886

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.96  E-value=1.2e-29  Score=283.77  Aligned_cols=192  Identities=20%  Similarity=0.277  Sum_probs=155.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  547 (702)
                      |++++++++.+++.||||||+++|+|.+++...   ...+++.++..++.||+.||+|||++   +|+||||||+|||++
T Consensus       127 iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~  203 (478)
T PTZ00267        127 IVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLM  203 (478)
T ss_pred             EeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEEC
Confidence            899999999999999999999999999988642   23578899999999999999999999   999999999999999


Q ss_pred             CCCcEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          548 DSWRAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                      .++.+||+|||+++.+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..  
T Consensus       204 ~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~---~~--  278 (478)
T PTZ00267        204 PTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ---RE--  278 (478)
T ss_pred             CCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---HH--
Confidence            999999999999987643322 123346699999999999988999999999999999999999999964311   10  


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                         .......+...     ..+...+..+.+++.+||+.||++||++++++.
T Consensus       279 ---~~~~~~~~~~~-----~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        279 ---IMQQVLYGKYD-----PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             ---HHHHHHhCCCC-----CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence               11111111111     112234567899999999999999999999864

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.96  E-value=1.3e-29  Score=264.21  Aligned_cols=195  Identities=23%  Similarity=0.284  Sum_probs=154.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  547 (702)
                      |+++...+..++..++||||+++|+|.+++...   ...+++.++..++.||+.||+|||++   +|+||||||+||+++
T Consensus        55 i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~  131 (280)
T cd05608          55 IVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLD  131 (280)
T ss_pred             EeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC
Confidence            777888888999999999999999999887542   23588999999999999999999999   999999999999999


Q ss_pred             CCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          548 DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      .++.+||+|||++..+..... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||...........  
T Consensus       132 ~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~--  208 (280)
T cd05608         132 NDGNVRISDLGLAVELKDGQS-KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE--  208 (280)
T ss_pred             CCCCEEEeeCccceecCCCCc-cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHH--
Confidence            999999999999986543322 22345689999999999999999999999999999999999999975422111111  


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVILM  679 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  679 (702)
                        .........      ...+...+..+.+++.+||+.||++||     +++++++.
T Consensus       209 --~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         209 --LKQRILNDS------VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             --HHHhhcccC------CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence              111111110      122334567788999999999999999     77888763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.96  E-value=9.7e-30  Score=270.86  Aligned_cols=188  Identities=24%  Similarity=0.303  Sum_probs=150.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++++++.++..|+||||+++++|..++..  ..+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~  138 (324)
T cd05589          64 LVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEG  138 (324)
T ss_pred             hhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCC
Confidence            67788889999999999999999999988854  3689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++....... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||.....   ....    
T Consensus       139 ~~kL~Dfg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~---~~~~----  210 (324)
T cd05589         139 FVKIADFGLCKEGMGFG-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE---EEVF----  210 (324)
T ss_pred             cEEeCcccCCccCCCCC-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH---HHHH----
Confidence            99999999987532221 223346789999999999988999999999999999999999999964411   1111    


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~  678 (702)
                       ........      ..+......+.+++.+||+.||++||     +++++++
T Consensus       211 -~~i~~~~~------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         211 -DSIVNDEV------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             -HHHHhCCC------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence             11111111      11223456788999999999999999     5666665

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.96  E-value=6.4e-30  Score=283.75  Aligned_cols=227  Identities=22%  Similarity=0.245  Sum_probs=176.4

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEE-Ee-----c-CCe
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVY-KH-----R-SSK  483 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~-~~-----~-~~~  483 (702)
                      .....++.|-+|+|  ||++....  ..+|+|                            ||.+++. ..     + .-+
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            34456788999998  99888765  566666                            7777752 11     1 357


Q ss_pred             eEEEEecCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          484 KLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      .+|.||||+||.|-|++... ..++++.++++|+.++++|+++||.. ...|||||||.|||||..+++.||||||.+..
T Consensus       117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt  195 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATT  195 (738)
T ss_pred             EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence            89999999999999999754 33599999999999999999999997 44699999999999999999999999999975


Q ss_pred             cCCCCCceee--------ceeccccccCcccc---cCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHH
Q 038002          563 LMPNQTGIVA--------GVRGSRGYMAPEWQ---NSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVY  631 (702)
Q Consensus       563 ~~~~~~~~~~--------~~~gt~~y~aPE~~---~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~  631 (702)
                      .....+....        ...-|+.|+|||.+   .+..+++|+|||+|||+||.|+....||+.....  .+       
T Consensus       196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--aI-------  266 (738)
T KOG1989|consen  196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--AI-------  266 (738)
T ss_pred             ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--eE-------
Confidence            4333311100        12358999999955   6789999999999999999999999999754111  00       


Q ss_pred             HhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCC
Q 038002          632 NCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEI  686 (702)
Q Consensus       632 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~  686 (702)
                         ..+..    .-...+.++.++.+||..||+.||++||++-+|++.+-.+...
T Consensus       267 ---lng~Y----~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~  314 (738)
T KOG1989|consen  267 ---LNGNY----SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK  314 (738)
T ss_pred             ---Eeccc----cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence               11111    1112357899999999999999999999999999988776543

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.96  E-value=5.9e-30  Score=278.33  Aligned_cols=194  Identities=20%  Similarity=0.199  Sum_probs=148.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+++++..++||||+++|+|.+++...+ .+++..+..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus        63 iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~  138 (376)
T cd05598          63 VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDG  138 (376)
T ss_pred             cceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCC
Confidence            7778889999999999999999999999997654 688889999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCC------------------------------------------CceeeceeccccccCcccccC
Q 038002          551 RAKISDFGLAKLLMPNQ------------------------------------------TGIVAGVRGSRGYMAPEWQNS  588 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~------------------------------------------~~~~~~~~gt~~y~aPE~~~~  588 (702)
                      .+||+|||++..+....                                          ........||+.|+|||++.+
T Consensus       139 ~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  218 (376)
T cd05598         139 HIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR  218 (376)
T ss_pred             CEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC
Confidence            99999999975331000                                          000113469999999999998


Q ss_pred             CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCC
Q 038002          589 GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPN  668 (702)
Q Consensus       589 ~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~  668 (702)
                      ..++.++|||||||++|||++|+.||...........        ......  ..........+..+.+++.+|+ .+|.
T Consensus       219 ~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~--------i~~~~~--~~~~~~~~~~s~~~~~li~~l~-~~p~  287 (376)
T cd05598         219 TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLK--------VINWET--TLHIPSQAKLSREASDLILRLC-CGAE  287 (376)
T ss_pred             CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHH--------HhccCc--cccCCCCCCCCHHHHHHHHHHh-cCHh
Confidence            8999999999999999999999999975421111000        000000  0000111123456677777766 4999


Q ss_pred             CCC---CHHHHHHH
Q 038002          669 LRP---SMKNVILM  679 (702)
Q Consensus       669 ~RP---t~~evl~~  679 (702)
                      +|+   +++|+++.
T Consensus       288 ~R~~~~t~~ell~h  301 (376)
T cd05598         288 DRLGKNGADEIKAH  301 (376)
T ss_pred             hcCCCCCHHHHhCC
Confidence            999   88888865

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=6.9e-30  Score=271.89  Aligned_cols=216  Identities=26%  Similarity=0.253  Sum_probs=178.2

Q ss_pred             cceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEecCCCCCH
Q 038002          448 KRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEFMSKGSL  496 (702)
Q Consensus       448 ~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~~~~gsL  496 (702)
                      +-.+|+|..  ||.|....  ..+|||                           |+++++.+.+++++-+.||.++||||
T Consensus       580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL  659 (1226)
T KOG4279|consen  580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL  659 (1226)
T ss_pred             eEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence            346888876  99888765  566776                           88999999999999999999999999


Q ss_pred             HHHhhcCCCCC--CHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE-eCCCcEEEecccceeecCCCCCceeec
Q 038002          497 ADLLFNLETRP--LWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI-DDSWRAKISDFGLAKLLMPNQTGIVAG  573 (702)
Q Consensus       497 ~~~l~~~~~~~--~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll-~~~~~~kl~Dfg~a~~~~~~~~~~~~~  573 (702)
                      .++|+..-+++  ++..+-.+..||++||.|||++   .|||||||-+|+|+ .-.|.+||+|||-++.+.. -.....+
T Consensus       660 SsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg-inP~TET  735 (1226)
T KOG4279|consen  660 SSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG-INPCTET  735 (1226)
T ss_pred             HHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc-CCccccc
Confidence            99998875555  7888888999999999999999   99999999999999 4688999999999987643 2334556


Q ss_pred             eeccccccCcccccCC--CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHH
Q 038002          574 VRGSRGYMAPEWQNSG--LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT  651 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  651 (702)
                      +.||..|||||++..+  .|..++|||||||++.||.||++||-.........         +.-+.  --..++++.+.
T Consensus       736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM---------FkVGm--yKvHP~iPeel  804 (1226)
T KOG4279|consen  736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM---------FKVGM--YKVHPPIPEEL  804 (1226)
T ss_pred             cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh---------hhhcc--eecCCCCcHHH
Confidence            7899999999998654  68899999999999999999999996542221111         11111  12345778889


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          652 LERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       652 ~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      +.+...+|++|+.+||.+||++.++++
T Consensus       805 saeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  805 SAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            999999999999999999999999986

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.96  E-value=2.3e-29  Score=272.79  Aligned_cols=223  Identities=18%  Similarity=0.167  Sum_probs=166.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +.+...+.||+|++  ||++....  ..+|+|                              |++++..+++++..++||
T Consensus        43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~  122 (371)
T cd05622          43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM  122 (371)
T ss_pred             hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            34455677888877  77665532  334443                              677888899999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+++|+|.+++...  .+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||++........
T Consensus       123 Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~  197 (371)
T cd05622         123 EYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM  197 (371)
T ss_pred             cCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCc
Confidence            999999999999654  478888999999999999999999   999999999999999999999999999987644333


Q ss_pred             ceeeceeccccccCcccccCC----CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          569 GIVAGVRGSRGYMAPEWQNSG----LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      .......||+.|+|||++...    .++.++|||||||++|||++|+.||.....   ..     ....+.....  ...
T Consensus       198 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~---~~-----~~~~i~~~~~--~~~  267 (371)
T cd05622         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL---VG-----TYSKIMNHKN--SLT  267 (371)
T ss_pred             ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH---HH-----HHHHHHcCCC--ccc
Confidence            233456799999999988653    378999999999999999999999975311   11     1111111100  000


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHH
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNL--RPSMKNVILML  680 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~--RPt~~evl~~L  680 (702)
                      .......+..+.+++.+||+.++.+  ||+++|+++..
T Consensus       268 ~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         268 FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             CCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence            1112235667888999999844433  78999988853

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.96  E-value=1.3e-29  Score=247.23  Aligned_cols=199  Identities=23%  Similarity=0.264  Sum_probs=158.5

Q ss_pred             eeeEEEEEec----CCeeEEEEecCCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEE
Q 038002          471 ISSLLVYKHR----SSKKLLVYEFMSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL  545 (702)
Q Consensus       471 i~~l~~~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIl  545 (702)
                      |+.+++.|++    .+.+.+|||.|+||.|.+.+.+.+. .++++++..|+.||..|+.|||+.   +|.||||||+|+|
T Consensus       117 iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLL  193 (400)
T KOG0604|consen  117 IVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLL  193 (400)
T ss_pred             eEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhhee
Confidence            7888766554    6788999999999999999987764 489999999999999999999999   9999999999999


Q ss_pred             EeC---CCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcc
Q 038002          546 IDD---SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTAD  622 (702)
Q Consensus       546 l~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~  622 (702)
                      ...   +..+||+|||+|+.-..  .....+.+.|+.|.|||++....|+...|+||+||++|-|++|.+||....... 
T Consensus       194 yt~t~~na~lKLtDfGFAK~t~~--~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a-  270 (400)
T KOG0604|consen  194 YTTTSPNAPLKLTDFGFAKETQE--PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-  270 (400)
T ss_pred             eecCCCCcceEecccccccccCC--CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-
Confidence            954   55799999999996543  233556788999999999999999999999999999999999999998653211 


Q ss_pred             hhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038002          623 EVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML  680 (702)
Q Consensus       623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  680 (702)
                         +..-....+..+... + ..+.-...++...++|+.+|..+|.+|.|+++++..-
T Consensus       271 ---ispgMk~rI~~gqy~-F-P~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hp  323 (400)
T KOG0604|consen  271 ---ISPGMKRRIRTGQYE-F-PEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHP  323 (400)
T ss_pred             ---CChhHHhHhhccCcc-C-CChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCc
Confidence               111112222222221 1 1122345688899999999999999999999998753

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.96  E-value=1.6e-29  Score=258.89  Aligned_cols=196  Identities=22%  Similarity=0.303  Sum_probs=154.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..++..++||||+++++|.+++......+++.++..++.|++.||+|||++   +|+|+||||+||+++.++
T Consensus        55 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~  131 (252)
T cd05084          55 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKN  131 (252)
T ss_pred             cceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCC
Confidence            78888899999999999999999999999976655689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCcee-eceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIV-AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      .+||+|||++........... .....+..|+|||.+.+..++.++||||||+++|||++ |..||......    ..  
T Consensus       132 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~----~~--  205 (252)
T cd05084         132 VLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ----QT--  205 (252)
T ss_pred             cEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH----HH--
Confidence            999999999875432211111 11123456999999988889999999999999999998 88888543110    00  


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                        ....... .    ....+...+..+.+++.+||+.+|++||++++|+++|+.
T Consensus       206 --~~~~~~~-~----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~  252 (252)
T cd05084         206 --REAIEQG-V----RLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS  252 (252)
T ss_pred             --HHHHHcC-C----CCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence              0111110 0    111222345678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.96  E-value=1.2e-29  Score=269.67  Aligned_cols=185  Identities=22%  Similarity=0.226  Sum_probs=149.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+++.+..++||||+++++|...+.... .+++.++..++.||+.||+|||+.   +|+||||||+||+++.++
T Consensus        58 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~  133 (321)
T cd05603          58 LVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRER-CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQG  133 (321)
T ss_pred             ccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCC
Confidence            7788888999999999999999999999887644 688889999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++...... ........|++.|+|||.+.+..++.++|||||||++|||++|..||.....    ..    .
T Consensus       134 ~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~----~  204 (321)
T cd05603         134 HVVLTDFGLCKEGVEP-EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV----SQ----M  204 (321)
T ss_pred             CEEEccCCCCccCCCC-CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH----HH----H
Confidence            9999999998753222 1223345689999999999888899999999999999999999999964311    11    1


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMK  674 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~  674 (702)
                      .........      ..+......+.+++.+||+.||.+||++.
T Consensus       205 ~~~i~~~~~------~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         205 YDNILHKPL------QLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HHHHhcCCC------CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            111111111      12233456788999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.96  E-value=1.1e-29  Score=270.17  Aligned_cols=184  Identities=22%  Similarity=0.323  Sum_probs=148.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++...++.++..|+||||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus        63 i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~  138 (323)
T cd05615          63 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEG  138 (323)
T ss_pred             hhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCC
Confidence            4556678888999999999999999999997654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   ..     .
T Consensus       139 ~ikL~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~-----~  209 (323)
T cd05615         139 HIKIADFGMCKEHMVDG-VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE---DE-----L  209 (323)
T ss_pred             CEEEeccccccccCCCC-ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH---HH-----H
Confidence            99999999987543222 122345689999999999888899999999999999999999999965411   11     1


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSM  673 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~  673 (702)
                      .........      ..+...+..+.+++.+||+.+|.+|++.
T Consensus       210 ~~~i~~~~~------~~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         210 FQSIMEHNV------SYPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             HHHHHhCCC------CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence            111111111      1222345678899999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.96  E-value=1.5e-29  Score=264.69  Aligned_cols=199  Identities=22%  Similarity=0.250  Sum_probs=148.9

Q ss_pred             eeeEEEEEe-----cCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKH-----RSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~-----~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |+++++.+.     .+...++||||++ ++|.+++.... ..+++.++..++.||+.||+|||++   +|+||||||+||
T Consensus        66 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Ni  141 (290)
T cd07862          66 VVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNI  141 (290)
T ss_pred             cceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHE
Confidence            566665553     4567999999996 59999987643 3588999999999999999999999   999999999999


Q ss_pred             EEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       545 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      +++.++.+||+|||++......  .......|++.|+|||.+.+..++.++||||||+++|||++|+.||.......   
T Consensus       142 l~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~---  216 (290)
T cd07862         142 LVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---  216 (290)
T ss_pred             EEcCCCCEEEccccceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH---
Confidence            9999999999999999875433  22334568999999999988889999999999999999999999997542211   


Q ss_pred             hhHHHHHHhh--hcccccc-------cccc-------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCF--VAGEFNK-------LVEE-------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~--~~~~~~~-------~~~~-------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .+........  ....+..       ....       ...+.....+.+++.+||+.||++|||+.|+++
T Consensus       217 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         217 QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             HHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            1111110000  0000000       0000       111234567789999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.6e-29  Score=275.01  Aligned_cols=194  Identities=21%  Similarity=0.191  Sum_probs=148.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+++++..|+||||+++|+|.+++...+ .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++
T Consensus        63 iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~  138 (377)
T cd05629          63 VVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGG  138 (377)
T ss_pred             cceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCC
Confidence            7888899999999999999999999999997654 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCc----------------------------------------------eeeceeccccccCcc
Q 038002          551 RAKISDFGLAKLLMPNQTG----------------------------------------------IVAGVRGSRGYMAPE  584 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~----------------------------------------------~~~~~~gt~~y~aPE  584 (702)
                      .+||+|||+++.+......                                              ......||+.|+|||
T Consensus       139 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  218 (377)
T cd05629         139 HIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPE  218 (377)
T ss_pred             CEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHH
Confidence            9999999998643210000                                              001246899999999


Q ss_pred             cccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHccc
Q 038002          585 WQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQ  664 (702)
Q Consensus       585 ~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~  664 (702)
                      ++.+..++.++|||||||++|||++|..||......  + ..     ..+....  ..+.-.........+.+++.+||+
T Consensus       219 ~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~-~~-----~~i~~~~--~~~~~p~~~~~s~~~~dli~~lL~  288 (377)
T cd05629         219 IFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSH--E-TY-----RKIINWR--ETLYFPDDIHLSVEAEDLIRRLIT  288 (377)
T ss_pred             HHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHH--H-HH-----HHHHccC--CccCCCCCCCCCHHHHHHHHHHhc
Confidence            998889999999999999999999999999654211  1 11     1111100  000000011234578888999998


Q ss_pred             CCCCCC---CCHHHHHHH
Q 038002          665 DEPNLR---PSMKNVILM  679 (702)
Q Consensus       665 ~dP~~R---Pt~~evl~~  679 (702)
                       +|.+|   +++.|+++.
T Consensus       289 -~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         289 -NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             -CHhhcCCCCCHHHHhcC
Confidence             66665   599998875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.96  E-value=2.3e-29  Score=257.28  Aligned_cols=196  Identities=23%  Similarity=0.290  Sum_probs=156.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+...+..++||||+++++|.+++......+++..+..++.|++.+|.|||++   +++|+||||+||+++.++
T Consensus        54 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~  130 (250)
T cd05085          54 IVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENN  130 (250)
T ss_pred             cCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCC
Confidence            77888888999999999999999999999977655688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++...............++..|+|||++....++.++||||||+++|++++ |..||......    ...  
T Consensus       131 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~----~~~--  204 (250)
T cd05085         131 VLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ----QAR--  204 (250)
T ss_pred             eEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH----HHH--
Confidence            99999999987643322211122234567999999988889999999999999999998 99999643111    111  


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                        .......     ....+...+..+.+++.+||+.+|++||++.|+++.|.+
T Consensus       205 --~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  250 (250)
T cd05085         205 --EQVEKGY-----RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELAA  250 (250)
T ss_pred             --HHHHcCC-----CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhcC
Confidence              1111111     111122345788999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.96  E-value=2.5e-29  Score=261.48  Aligned_cols=197  Identities=21%  Similarity=0.283  Sum_probs=154.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++...++++.+.++||||+++++|.+++.... ..+++..+..++.||+.||+|||+.   +|+||||||+||+++.+
T Consensus        55 i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~  131 (277)
T cd05607          55 IVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQ  131 (277)
T ss_pred             EEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCC
Confidence            7888889999999999999999999999886543 3588899999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      +.++|+|||++.......  ......|+..|+|||++.+..++.++|||||||++|||++|+.||..........   . 
T Consensus       132 ~~~~l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~---~-  205 (277)
T cd05607         132 GNCRLSDLGLAVELKDGK--TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKE---E-  205 (277)
T ss_pred             CCEEEeeceeeeecCCCc--eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHH---H-
Confidence            999999999998764322  2234568999999999988889999999999999999999999996432211111   1 


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                      ............     ........+.+++.+||+.||++||+++|+++.+.
T Consensus       206 ~~~~~~~~~~~~-----~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~  252 (277)
T cd05607         206 LKRRTLEDEVKF-----EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPR  252 (277)
T ss_pred             HHHHhhcccccc-----ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence            111111111110     11234567899999999999999999977664443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.96  E-value=2.2e-29  Score=274.64  Aligned_cols=199  Identities=26%  Similarity=0.355  Sum_probs=157.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC----------------------------------------------
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE----------------------------------------------  504 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------------------------------------------  504 (702)
                      |+++++++.+++..||||||+++|+|.++|....                                              
T Consensus       103 Iv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (400)
T cd05105         103 IVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQ  182 (400)
T ss_pred             eeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccc
Confidence            7888999999999999999999999999886421                                              


Q ss_pred             -------------------------------------------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          505 -------------------------------------------------TRPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       505 -------------------------------------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                                                                       ..+++.++..++.||++||+|||+.   +|+
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iv  259 (400)
T cd05105         183 ADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCV  259 (400)
T ss_pred             ccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence                                                             1366778889999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcC
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSN  613 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~P  613 (702)
                      |+||||+||+++.++.+||+|||++......... ......++..|+|||.+.+..++.++||||||+++|||++ |..|
T Consensus       260 H~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P  339 (400)
T cd05105         260 HRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTP  339 (400)
T ss_pred             CCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence            9999999999999999999999999865433221 1223346778999999988889999999999999999997 9999


Q ss_pred             CcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          614 FEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       614 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      |.......  .     .......+.     ....+...+..+.+++.+||+.||++||++.+|.++|+.+.
T Consensus       340 ~~~~~~~~--~-----~~~~~~~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~  398 (400)
T cd05105         340 YPGMIVDS--T-----FYNKIKSGY-----RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL  398 (400)
T ss_pred             CcccchhH--H-----HHHHHhcCC-----CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence            86431111  0     111111111     11122334667899999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=6.1e-29  Score=259.76  Aligned_cols=194  Identities=27%  Similarity=0.305  Sum_probs=154.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+.++..+..++..++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+.   +|+|+||||+||+++++
T Consensus        62 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~  138 (285)
T cd05605          62 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDY  138 (285)
T ss_pred             EeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCC
Confidence            7777888888999999999999999999886543 3588999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      +.++|+|||++........  .....|++.|+|||.+.+..++.++||||+|+++|||++|+.||.......   .. ..
T Consensus       139 ~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~---~~-~~  212 (285)
T cd05605         139 GHIRISDLGLAVEIPEGET--IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV---KR-EE  212 (285)
T ss_pred             CCEEEeeCCCceecCCCCc--cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh---HH-HH
Confidence            9999999999987533222  233468999999999988889999999999999999999999997542111   10 00


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  679 (702)
                      ........      ....+...+..+.+++.+||+.||++||     +++++++.
T Consensus       213 ~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         213 VERRVKED------QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             HHHHhhhc------ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence            11111110      1122334567788999999999999999     88888664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.96  E-value=2.7e-29  Score=263.16  Aligned_cols=199  Identities=25%  Similarity=0.369  Sum_probs=159.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                      |+++++++..++..++||||+++++|.+++....               ..+++..++.++.||+.||+|||++   +|+
T Consensus        69 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~  145 (291)
T cd05094          69 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFV  145 (291)
T ss_pred             cceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence            7888899999999999999999999999997532               2478899999999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcC
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSN  613 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~P  613 (702)
                      ||||||+||+++.++.++|+|||++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..|
T Consensus       146 H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  225 (291)
T cd05094         146 HRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP  225 (291)
T ss_pred             ecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999976533221 11223446788999999988889999999999999999999 9999


Q ss_pred             CcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          614 FEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       614 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      |......   .     ..+....+....     .....+..+.+++.+||+.||++||++++|+++|+++..
T Consensus       226 ~~~~~~~---~-----~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         226 WFQLSNT---E-----VIECITQGRVLE-----RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             CCCCCHH---H-----HHHHHhCCCCCC-----CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence            8643111   0     111112222111     122345678899999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.96  E-value=2.1e-29  Score=269.27  Aligned_cols=202  Identities=23%  Similarity=0.344  Sum_probs=151.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+.++++.++||||+++++|.+++.... .+++..+..++.|++.||+|||+..  +|+|+||||+||+++.++
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~  141 (333)
T cd06650          65 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRG  141 (333)
T ss_pred             ccceeEEEEECCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCC
Confidence            7888899999999999999999999999997654 6888999999999999999999741  799999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++.......   .....|+..|+|||.+.+..++.++|||||||++|||++|+.||................
T Consensus       142 ~~kL~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  218 (333)
T cd06650         142 EIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPV  218 (333)
T ss_pred             CEEEeeCCcchhhhhhc---cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcc
Confidence            99999999987553221   233468999999999988889999999999999999999999996432111000000000


Q ss_pred             HHh-------------------hhcc-----c---ccc-ccc---ccc-CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          631 YNC-------------------FVAG-----E---FNK-LVE---EEV-DKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       631 ~~~-------------------~~~~-----~---~~~-~~~---~~~-~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ...                   ....     .   ... ...   +.. ......++.+++.+||+.||++|||++|+++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~  298 (333)
T cd06650         219 EGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV  298 (333)
T ss_pred             cCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence            000                   0000     0   000 000   000 0113467889999999999999999999975

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=8.1e-30  Score=273.36  Aligned_cols=227  Identities=26%  Similarity=0.303  Sum_probs=181.3

Q ss_pred             cccceEEEeEE--EEEeeeehh-----h-hHhh------------------------------eeeEEEEEecCCeeEEE
Q 038002          446 NDKRKLLTVLA--GCLGSITFL-----C-FLIA------------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       446 ~~~~~l~~g~~--v~~~~~~~~-----~-~avk------------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      ...++||+|+|  |+.|.+...     . ||||                              |++++++...+..++||
T Consensus       160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv  239 (474)
T KOG0194|consen  160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV  239 (474)
T ss_pred             cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence            33489999999  999998751     2 6777                              99999999999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      ||+|+||+|.++|++.+..++..+...++.+.+.||+|||++   ++|||||-.+|+|+..++.+||+|||+++.-....
T Consensus       240 mEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~  316 (474)
T KOG0194|consen  240 MELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYV  316 (474)
T ss_pred             EEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCCccee
Confidence            999999999999999887799999999999999999999999   99999999999999999999999999987542111


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                      . ......-+..|+|||.+....++.++|||||||++||+.+ |..||......    .    +...+.....    ...
T Consensus       317 ~-~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~----~----v~~kI~~~~~----r~~  383 (474)
T KOG0194|consen  317 M-KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY----E----VKAKIVKNGY----RMP  383 (474)
T ss_pred             e-ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH----H----HHHHHHhcCc----cCC
Confidence            1 1111234678999999999999999999999999999998 88898654211    1    1111111111    112


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCCC
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPI  688 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~~  688 (702)
                      .+...+..+..++.+|++.||++||+|.++.+.|+.+.....
T Consensus       384 ~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  384 IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             CCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence            223446677788889999999999999999999988655433

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.96  E-value=1.8e-29  Score=259.75  Aligned_cols=196  Identities=28%  Similarity=0.404  Sum_probs=157.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++.++..++..++||||+++++|.+++.+.. ..+++.++..++.||+.||+|||++   +|+|+||||+||+++++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~  140 (261)
T cd05148          64 LISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGED  140 (261)
T ss_pred             hhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCC
Confidence            6777888899999999999999999999998643 3578999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.+||+|||.+........ ......++..|+|||.+....++.++||||||+++|+|++ |+.||.....   ..... 
T Consensus       141 ~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~---~~~~~-  215 (261)
T cd05148         141 LVCKVADFGLARLIKEDVY-LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN---HEVYD-  215 (261)
T ss_pred             ceEEEccccchhhcCCccc-cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH---HHHHH-
Confidence            9999999999986643221 1223345678999999988889999999999999999998 8999964321   11111 


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                          ....+     .....+...++.+.+++.+||+.||++|||++++++.|+++
T Consensus       216 ----~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         216 ----QITAG-----YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             ----HHHhC-----CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence                11111     01112234456788999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.96  E-value=1.1e-29  Score=256.37  Aligned_cols=200  Identities=24%  Similarity=0.281  Sum_probs=153.9

Q ss_pred             eeeEEEEEecCC------eeEEEEecCCCCCHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCC
Q 038002          471 ISSLLVYKHRSS------KKLLVYEFMSKGSLADLLFNLE---TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKL  541 (702)
Q Consensus       471 i~~l~~~~~~~~------~~~lV~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp  541 (702)
                      |+.|++.+.+++      ..++|+||++. +|..++....   ..++...+..++.||++||+|||++   +|+||||||
T Consensus        73 iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKP  148 (323)
T KOG0594|consen   73 IVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKP  148 (323)
T ss_pred             eEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCc
Confidence            788887777766      89999999965 9999998776   3577788999999999999999999   999999999


Q ss_pred             CcEEEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCC
Q 038002          542 RNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVST  620 (702)
Q Consensus       542 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~  620 (702)
                      +|||++++|.+||+|||+|+.+.-.. ...++..+|..|+|||++.+. .|+...||||+|||+.||++++.-|..... 
T Consensus       149 QNlLi~~~G~lKlaDFGlAra~~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-  226 (323)
T KOG0594|consen  149 QNLLISSSGVLKLADFGLARAFSIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-  226 (323)
T ss_pred             ceEEECCCCcEeeeccchHHHhcCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-
Confidence            99999999999999999999664332 235566789999999988765 899999999999999999999999976532 


Q ss_pred             cchhhhHHHHHHhh---hcccccccc---------cc-----cc---CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          621 ADEVLLSTWVYNCF---VAGEFNKLV---------EE-----EV---DKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       621 ~~~~~~~~~~~~~~---~~~~~~~~~---------~~-----~~---~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .++.   ..+....   .+..++...         ..     ..   .+.......+++.+||+.+|.+|.|++.++++
T Consensus       227 ~~ql---~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  227 IDQL---FRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             HHHH---HHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence            1111   1111111   001111100         00     01   11112478889999999999999999999986

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=5.5e-29  Score=265.84  Aligned_cols=196  Identities=20%  Similarity=0.202  Sum_probs=149.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+.++..++++++.|+||||+++|+|.+++.+....+++.++..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~  139 (331)
T cd05597          63 ITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNG  139 (331)
T ss_pred             CCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCC
Confidence            67777888999999999999999999999987655789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC-----CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-----GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                      .+||+|||++...............||+.|+|||++..     ..++.++|||||||++|||++|+.||......   ..
T Consensus       140 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~---~~  216 (331)
T cd05597         140 HIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV---ET  216 (331)
T ss_pred             CEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH---HH
Confidence            99999999997664433322333568999999998863     45788999999999999999999999643110   00


Q ss_pred             hHHHHHHhhhc-cccccccccccCHHHHHHHHHHHHHcccCCC--CCCCCHHHHHHH
Q 038002          626 LSTWVYNCFVA-GEFNKLVEEEVDKITLERMVKTGLLCIQDEP--NLRPSMKNVILM  679 (702)
Q Consensus       626 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP--~~RPt~~evl~~  679 (702)
                           ...... ..... +.. .....++.+.+++.+||..++  ..||+++++++.
T Consensus       217 -----~~~i~~~~~~~~-~~~-~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         217 -----YGKIMNHKEHFQ-FPP-DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             -----HHHHHcCCCccc-CCC-ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence                 011111 10001 111 111245667778888775533  347899998876

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.1e-29  Score=261.66  Aligned_cols=199  Identities=24%  Similarity=0.301  Sum_probs=153.4

Q ss_pred             eeeEEEEEe--cCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKH--RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~--~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |++|++.-.  +.+++|||+|||..|.+...=.... .+++.++++++++++.||+|||.+   |||||||||+|+|+++
T Consensus       170 VV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~-els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~  245 (576)
T KOG0585|consen  170 VVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKP-ELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSS  245 (576)
T ss_pred             eeEEEEeecCcccCceEEEEEeccCCccccCCCCcc-cccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcC
Confidence            899987764  5889999999999888765432221 388999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCC----CCceeeceeccccccCcccccCC----CCCccccccchhHhHHHhhhCCcCCcCCCCC
Q 038002          549 SWRAKISDFGLAKLLMPN----QTGIVAGVRGSRGYMAPEWQNSG----LITVKSDVYSFGVVLLEIICCRSNFEVNVST  620 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwSlGvil~elltG~~Pf~~~~~~  620 (702)
                      +|++||+|||.+..+...    .........|||.|+|||...++    ..+.+.||||+||+||.|+.|+.||-...  
T Consensus       246 ~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~--  323 (576)
T KOG0585|consen  246 DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF--  323 (576)
T ss_pred             CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch--
Confidence            999999999999876322    11223347799999999977652    23578899999999999999999996431  


Q ss_pred             cchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          621 ADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                        +.    ..+..+....+    .-...+++.+++.+||++||++||++|.+..+|....--...
T Consensus       324 --~~----~l~~KIvn~pL----~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  324 --EL----ELFDKIVNDPL----EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             --HH----HHHHHHhcCcc----cCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence              11    12222222221    112233567889999999999999999999999887755443

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.96  E-value=1.2e-29  Score=250.96  Aligned_cols=228  Identities=18%  Similarity=0.174  Sum_probs=170.5

Q ss_pred             cccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEE--EEEecCCeeEEEEec
Q 038002          446 NDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLL--VYKHRSSKKLLVYEF  490 (702)
Q Consensus       446 ~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~--~~~~~~~~~~lV~e~  490 (702)
                      ..-.+|++|.+  ||++....  +.||.|                             |+.+-  ....+-+.+|+||||
T Consensus        79 e~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~  158 (419)
T KOG0663|consen   79 EKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEY  158 (419)
T ss_pred             HHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHH
Confidence            34456777776  77777654  667766                             44443  344557779999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      |+. +|..++...+.++...++..++.|+++|++|||.+   .|+||||||+|+|+.+.|.+||+|||+|+.+... ...
T Consensus       159 ~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp-~k~  233 (419)
T KOG0663|consen  159 VEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYGSP-LKP  233 (419)
T ss_pred             HHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhcCC-ccc
Confidence            977 99999998888899999999999999999999999   9999999999999999999999999999988544 334


Q ss_pred             eeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccc-----
Q 038002          571 VAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE-----  644 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  644 (702)
                      .+...-|..|+|||.+.+ ..|+.+.|+||+|||+.||+++++.|.+.... ++....-.......+..++.+..     
T Consensus       234 ~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~-dQl~~If~llGtPte~iwpg~~~lp~~k  312 (419)
T KOG0663|consen  234 YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI-DQLDKIFKLLGTPSEAIWPGYSELPAVK  312 (419)
T ss_pred             CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH-HHHHHHHHHhCCCccccCCCccccchhh
Confidence            566778999999997765 57999999999999999999999999765222 22211110100001111111000     


Q ss_pred             -------------cccCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          645 -------------EEVDKI-TLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       645 -------------~~~~~~-~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                                   ..+... ..+.-.+|+..+|..||.+|.|++|.++.
T Consensus       313 ~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  313 KMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH  361 (419)
T ss_pred             ccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence                         011111 34677888999999999999999998753

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.96  E-value=3.8e-29  Score=260.44  Aligned_cols=198  Identities=23%  Similarity=0.311  Sum_probs=155.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++. +...++|+||+++|+|.+++......+++..+..++.||+.||+|||++   +++|+||||+||++++++
T Consensus        71 iv~~~~~~~-~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~  146 (279)
T cd05111          71 IVRLLGICP-GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDS  146 (279)
T ss_pred             cceEEEEEC-CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCC
Confidence            677777664 5567899999999999999987666789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          551 RAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      .+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||......    ....
T Consensus       147 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~----~~~~  222 (279)
T cd05111         147 IVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH----EVPD  222 (279)
T ss_pred             cEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHH
Confidence            999999999987643322 12233456778999999988889999999999999999998 99999644111    1111


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      .    ...+...  ..   +......+.+++.+||..||++|||+.|+++.|+.+.+
T Consensus       223 ~----~~~~~~~--~~---~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         223 L----LEKGERL--AQ---PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             H----HHCCCcC--CC---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence            1    1111111  01   11123467788999999999999999999999988664

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.2e-29  Score=255.18  Aligned_cols=234  Identities=20%  Similarity=0.215  Sum_probs=171.8

Q ss_pred             cceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEe-----cCCeeEEEEe
Q 038002          448 KRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKH-----RSSKKLLVYE  489 (702)
Q Consensus       448 ~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~-----~~~~~~lV~e  489 (702)
                      .+.+|+|++  |+.+....  ..||+|                             |+.+...+.     +-+..|+|+|
T Consensus        27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e  106 (359)
T KOG0660|consen   27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE  106 (359)
T ss_pred             cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence            567888887  67666554  778887                             555554443     4678999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCC-CC
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN-QT  568 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-~~  568 (702)
                      +| +-+|...|+.+. .++...+..++.||++||+|+|+.   +|+||||||+|++++.+..+||+|||+|+..... ..
T Consensus       107 lM-etDL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~  181 (359)
T KOG0660|consen  107 LM-ETDLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFED  181 (359)
T ss_pred             HH-hhHHHHHHHcCc-cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeeccccCcc
Confidence            99 559999998764 588888999999999999999999   9999999999999999999999999999987543 12


Q ss_pred             ceeeceeccccccCccccc-CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH-------HHHhhhccccc
Q 038002          569 GIVAGVRGSRGYMAPEWQN-SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW-------VYNCFVAGEFN  640 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~~~  640 (702)
                      ...+....|..|.|||++. ...|+.+.||||+|||+.||++|+.-|.+...-.+-..+.+.       ....+......
T Consensus       182 ~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar  261 (359)
T KOG0660|consen  182 GFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKAR  261 (359)
T ss_pred             cchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHH
Confidence            3346677899999999764 568999999999999999999999999765322111111000       00001100000


Q ss_pred             cccc----------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhCCcCC
Q 038002          641 KLVE----------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM--LEGTMEI  686 (702)
Q Consensus       641 ~~~~----------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~--Le~~~~~  686 (702)
                      ..+.          ...-+......++|+.+||+.||.+|+|++|.++.  |+....+
T Consensus       262 ~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp  319 (359)
T KOG0660|consen  262 PYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDP  319 (359)
T ss_pred             HHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCC
Confidence            0100          02223456678999999999999999999999873  4554433

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.96  E-value=3.6e-29  Score=261.78  Aligned_cols=199  Identities=24%  Similarity=0.372  Sum_probs=158.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCD  538 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~d  538 (702)
                      |+++++++..++..++||||+++++|.+++....            ..+++.++..++.|++.||+|||++   +++|||
T Consensus        69 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~d  145 (288)
T cd05093          69 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRD  145 (288)
T ss_pred             cceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ceeecc
Confidence            7888889999999999999999999999997432            2478999999999999999999999   999999


Q ss_pred             CCCCcEEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcC
Q 038002          539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEV  616 (702)
Q Consensus       539 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~  616 (702)
                      |||+||++++++.+||+|||++......... ......++..|+|||.+.+..++.++||||||+++|||++ |..||..
T Consensus       146 lkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~  225 (288)
T cd05093         146 LATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ  225 (288)
T ss_pred             cCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            9999999999999999999999865332211 1122345678999999988889999999999999999998 8999864


Q ss_pred             CCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          617 NVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ...   ..     .......+....     .+...+..+.+++.+||+.||.+|||++++++.|+++..
T Consensus       226 ~~~---~~-----~~~~i~~~~~~~-----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~  281 (288)
T cd05093         226 LSN---NE-----VIECITQGRVLQ-----RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK  281 (288)
T ss_pred             CCH---HH-----HHHHHHcCCcCC-----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            321   11     111112221111     112234578999999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.6e-29  Score=269.99  Aligned_cols=190  Identities=23%  Similarity=0.262  Sum_probs=149.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+.++..+++++..|+||||+++|+|.+++.... .+++..+..++.||++||+|||++   +|+||||||+|||++.++
T Consensus        58 i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~  133 (330)
T cd05586          58 IVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEG-RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATG  133 (330)
T ss_pred             CcceEEEEecCCeEEEEEcCCCCChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCC
Confidence            6777788999999999999999999999987654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++....... .......||+.|+|||.+.+. .++.++|||||||++|||++|+.||.....   ..     
T Consensus       134 ~~kl~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~---~~-----  204 (330)
T cd05586         134 HIALCDFGLSKANLTDN-KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT---QQ-----  204 (330)
T ss_pred             CEEEecCCcCcCCCCCC-CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH---HH-----
Confidence            99999999987542222 123346689999999988654 578999999999999999999999964311   11     


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC----CHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP----SMKNVIL  678 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP----t~~evl~  678 (702)
                      ....+..+... + .   .......+.+++.+||+.||++||    +++++++
T Consensus       205 ~~~~i~~~~~~-~-~---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         205 MYRNIAFGKVR-F-P---KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             HHHHHHcCCCC-C-C---CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            11111111110 0 0   112356778899999999999998    4666655

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=8.5e-30  Score=270.56  Aligned_cols=186  Identities=24%  Similarity=0.237  Sum_probs=151.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++.++..|+||||+++|+|.+++.+.. .+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        60 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~  135 (318)
T cd05582          60 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEG  135 (318)
T ss_pred             cccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCC
Confidence            7888899999999999999999999999997654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++....... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||.....    ...    
T Consensus       136 ~~kL~Dfg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~----~~~----  206 (318)
T cd05582         136 HIKLTDFGLSKESIDHE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR----KET----  206 (318)
T ss_pred             cEEEeeccCCcccCCCC-CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH----HHH----
Confidence            99999999987653322 123346789999999999888889999999999999999999999964311    111    


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKN  675 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~e  675 (702)
                      .........      ..+......+.+++.+||+.||++||++.+
T Consensus       207 ~~~i~~~~~------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         207 MTMILKAKL------GMPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             HHHHHcCCC------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            111111111      122334567889999999999999999554

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=9.4e-30  Score=241.51  Aligned_cols=215  Identities=21%  Similarity=0.214  Sum_probs=176.0

Q ss_pred             ccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEec
Q 038002          445 VNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      +...+.+|+|-|  ||.+....  -.||+|                              |.+++.+|.++...||++||
T Consensus        24 feigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEy  103 (281)
T KOG0580|consen   24 FEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEY  103 (281)
T ss_pred             ccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEe
Confidence            344567777776  88777654  344554                              78899999999999999999


Q ss_pred             CCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          491 MSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      ...|+|...|...+. ++++.....++.|++.||.|+|..   +||||||||+|+|++..+.+||+|||.+..-.   ..
T Consensus       104 a~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p---~~  177 (281)
T KOG0580|consen  104 APRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SN  177 (281)
T ss_pred             cCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC---CC
Confidence            999999999985543 589999999999999999999999   99999999999999999999999999998654   23


Q ss_pred             eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCH
Q 038002          570 IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK  649 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (702)
                      .....+||..|++||...+..++..+|+|++|++.||++.|.+||+.....+        .+..+..-+      -..+.
T Consensus       178 kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e--------tYkrI~k~~------~~~p~  243 (281)
T KOG0580|consen  178 KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE--------TYKRIRKVD------LKFPS  243 (281)
T ss_pred             CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH--------HHHHHHHcc------ccCCc
Confidence            3456789999999999999999999999999999999999999997653111        111111111      12234


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          650 ITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ..+....++|.+|+..+|.+|.+..|+++.
T Consensus       244 ~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  244 TISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             ccChhHHHHHHHHhccCccccccHHHHhhh
Confidence            566788899999999999999999999864

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.96  E-value=5.1e-29  Score=255.81  Aligned_cols=193  Identities=26%  Similarity=0.299  Sum_probs=152.0

Q ss_pred             eeeEEEE-EecCCeeEEEEecCCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVY-KHRSSKKLLVYEFMSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~-~~~~~~~~lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      ++++++. +..++..++||||+++++|.+++.+... .+++..+..++.|++.||+|||++   +|+||||||+||++++
T Consensus        61 i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~  137 (256)
T cd05082          61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSE  137 (256)
T ss_pred             eeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcC
Confidence            6666654 4567789999999999999999976543 478899999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhH
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~  627 (702)
                      ++.+||+|||++.......    ....++..|+|||++.+..++.++||||||+++|||++ |+.||.....    ... 
T Consensus       138 ~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~----~~~-  208 (256)
T cd05082         138 DNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----KDV-  208 (256)
T ss_pred             CCcEEecCCccceeccccC----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH----HHH-
Confidence            9999999999987643222    12234568999999988889999999999999999997 9999864311    011 


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                         ......+.     ........+..+.+++.+||+.+|++|||+++++++|+.+
T Consensus       209 ---~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         209 ---VPRVEKGY-----KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             ---HHHHhcCC-----CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence               11111111     1112223456788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=5.2e-29  Score=260.81  Aligned_cols=220  Identities=19%  Similarity=0.224  Sum_probs=165.8

Q ss_pred             ccccceEEEeEE--EEEeeeeh-hhhHhh------------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          445 VNDKRKLLTVLA--GCLGSITF-LCFLIA------------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~-~~~avk------------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      +...++||.|+.  ||+..... ..+|.|                              |++|++|.-.++.+|+||||-
T Consensus       363 Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G  442 (677)
T KOG0596|consen  363 YEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG  442 (677)
T ss_pred             hhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc
Confidence            444578888887  88776554 333433                              999999999999999999998


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCcee
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIV  571 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~  571 (702)
                      + .+|.++|.+....++...+..+..|++.|+.++|++   ||||.||||.|+|+- .|.+||+|||.|..+..+.+...
T Consensus       443 d-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~  517 (677)
T KOG0596|consen  443 D-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIV  517 (677)
T ss_pred             c-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhcccCcccccee
Confidence            5 499999988765555457888999999999999999   999999999999985 46899999999998877665543


Q ss_pred             -eceeccccccCcccccCC-----------CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccc
Q 038002          572 -AGVRGSRGYMAPEWQNSG-----------LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEF  639 (702)
Q Consensus       572 -~~~~gt~~y~aPE~~~~~-----------~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  639 (702)
                       ...+||+.||+||.+...           ..++++||||||||||+|+.|+.||....      .... ....+..+..
T Consensus       518 kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~------n~~a-Kl~aI~~P~~  590 (677)
T KOG0596|consen  518 KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII------NQIA-KLHAITDPNH  590 (677)
T ss_pred             eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH------HHHH-HHHhhcCCCc
Confidence             357899999999976421           25689999999999999999999996331      0000 0111111111


Q ss_pred             ccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          640 NKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       640 ~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      . +--+..+.  ..+++++++.||+.||.+||+..|||+.
T Consensus       591 ~-Iefp~~~~--~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  591 E-IEFPDIPE--NDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             c-ccccCCCC--chHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            0 00011111  1229999999999999999999999863

>PTZ00284 protein kinase; Provisional

Probab=99.96  E-value=3.3e-29  Score=280.08  Aligned_cols=226  Identities=15%  Similarity=0.142  Sum_probs=161.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhhe--------------------------------eeEEEEEec-CCeeE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIAI--------------------------------SSLLVYKHR-SSKKL  485 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avki--------------------------------~~l~~~~~~-~~~~~  485 (702)
                      ..++..++||+|+|  ||++....  ..||||+                                +++..++.. .++.+
T Consensus       129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~  208 (467)
T PTZ00284        129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMC  208 (467)
T ss_pred             CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEE
Confidence            34555678888887  88776543  5566663                                334455554 46889


Q ss_pred             EEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeCCC--------------
Q 038002          486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDDSW--------------  550 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~--------------  550 (702)
                      +|||++ +++|.+++.+.. .+++.++..++.||+.||+|||+ .   +|+||||||+|||++.++              
T Consensus       209 iv~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~  283 (467)
T PTZ00284        209 IVMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDPVTNRALPPD  283 (467)
T ss_pred             EEEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcccccccccccCCC
Confidence            999998 778999887654 68999999999999999999997 6   999999999999998765              


Q ss_pred             --cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          551 --RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       551 --~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                        .+||+|||.+....    .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +......
T Consensus       284 ~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~  358 (467)
T PTZ00284        284 PCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL-EHLHLME  358 (467)
T ss_pred             CceEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH
Confidence              49999999875432    1223467899999999999999999999999999999999999999754221 1111000


Q ss_pred             HHHH----hhh--------------cccccccccc-----------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          629 WVYN----CFV--------------AGEFNKLVEE-----------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       629 ~~~~----~~~--------------~~~~~~~~~~-----------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ....    .+.              .+.+.....+           .........+.+||.+||+.||++|||++|+++
T Consensus       359 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        359 KTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             HHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence            0000    000              0000000000           001112456789999999999999999999997

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.96  E-value=6.2e-29  Score=258.41  Aligned_cols=196  Identities=26%  Similarity=0.428  Sum_probs=153.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCC---------CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLET---------RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKL  541 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp  541 (702)
                      |+++++++..+...++||||+++++|.+++.....         .+++..+..++.|++.||+|||+.   +++|+||||
T Consensus        71 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp  147 (277)
T cd05062          71 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAA  147 (277)
T ss_pred             eeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcch
Confidence            78888889999999999999999999999975321         256788899999999999999999   999999999


Q ss_pred             CcEEEeCCCcEEEecccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCC
Q 038002          542 RNILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVS  619 (702)
Q Consensus       542 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~  619 (702)
                      +||++++++.++|+|||++.......... .....+++.|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus       148 ~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~  227 (277)
T cd05062         148 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN  227 (277)
T ss_pred             heEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence            99999999999999999987653322211 112335678999999988889999999999999999999 7888864311


Q ss_pred             CcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          620 TADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                         +.     ............     .+......+.+++.+||+.||++|||+.|++++|++
T Consensus       228 ---~~-----~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         228 ---EQ-----VLRFVMEGGLLD-----KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             ---HH-----HHHHHHcCCcCC-----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence               11     111111111111     122335678999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.96  E-value=3e-29  Score=280.99  Aligned_cols=221  Identities=21%  Similarity=0.247  Sum_probs=167.9

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhhee-----------------------------eEEEEEecC--------
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIAIS-----------------------------SLLVYKHRS--------  481 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avki~-----------------------------~l~~~~~~~--------  481 (702)
                      .++...+.||+|++  ||++....  ..||+|++                             ++...+...        
T Consensus        32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~  111 (496)
T PTZ00283         32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV  111 (496)
T ss_pred             CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence            45666788999988  78776543  66777733                             222222211        


Q ss_pred             CeeEEEEecCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEeccc
Q 038002          482 SKKLLVYEFMSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFG  558 (702)
Q Consensus       482 ~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg  558 (702)
                      ...++||||+++|+|.+++...   ...+++..+..++.|++.||+|||++   +|+||||||+|||++.++.+||+|||
T Consensus       112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DFG  188 (496)
T PTZ00283        112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDFG  188 (496)
T ss_pred             eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEecc
Confidence            1478999999999999998653   23578999999999999999999999   99999999999999999999999999


Q ss_pred             ceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcc
Q 038002          559 LAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAG  637 (702)
Q Consensus       559 ~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  637 (702)
                      +++.+..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   .    . .......+
T Consensus       189 ls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~---~----~-~~~~~~~~  260 (496)
T PTZ00283        189 FSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM---E----E-VMHKTLAG  260 (496)
T ss_pred             cCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH---H----H-HHHHHhcC
Confidence            9987643222 223346799999999999988999999999999999999999999964311   0    1 11111111


Q ss_pred             ccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          638 EFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       638 ~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ...     ..+......+.+++.+||+.||++||++.++++.
T Consensus       261 ~~~-----~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        261 RYD-----PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             CCC-----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            111     1233446678999999999999999999999864

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.9e-29  Score=288.41  Aligned_cols=223  Identities=29%  Similarity=0.389  Sum_probs=181.5

Q ss_pred             ccceEEEeEE--EEEeeeeh-------hhhHhh----------------------------eeeEEEEEecCCeeEEEEe
Q 038002          447 DKRKLLTVLA--GCLGSITF-------LCFLIA----------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~~-------~~~avk----------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      ..+.||+|.|  ||.|....       ..||||                            |+++++..-+....+|++|
T Consensus       696 l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~le  775 (1025)
T KOG1095|consen  696 LLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLE  775 (1025)
T ss_pred             eeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEeh
Confidence            3467999999  99999875       236776                            9999988888999999999


Q ss_pred             cCCCCCHHHHhhcC------CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          490 FMSKGSLADLLFNL------ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       490 ~~~~gsL~~~l~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                      ||++|+|..+|++.      ...+...+.+.++.|||+|+.|||++   ++|||||..+|+|++....+||+|||+|+.+
T Consensus       776 yM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGlArDi  852 (1025)
T KOG1095|consen  776 YMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGLARDI  852 (1025)
T ss_pred             hcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccchhHhh
Confidence            99999999999987      55688999999999999999999999   9999999999999999999999999999955


Q ss_pred             CCCCCceeec-eeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhcccccc
Q 038002          564 MPNQTGIVAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNK  641 (702)
Q Consensus       564 ~~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  641 (702)
                      .......... ..-...|||||.++.+.++.|+|||||||++||++| |..||......  +      +...+.++.  .
T Consensus       853 y~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~--~------v~~~~~~gg--R  922 (1025)
T KOG1095|consen  853 YDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF--E------VLLDVLEGG--R  922 (1025)
T ss_pred             hhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH--H------HHHHHHhCC--c
Confidence            4433322222 234568999999999999999999999999999999 88898654111  1      111122222  1


Q ss_pred             ccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          642 LVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       642 ~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      +   +.+...++.+.++|..||+.+|++||++..|++.++.+..
T Consensus       923 L---~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~  963 (1025)
T KOG1095|consen  923 L---DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN  963 (1025)
T ss_pred             c---CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence            1   2244567788899999999999999999999999987644

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.96  E-value=5.9e-29  Score=255.97  Aligned_cols=195  Identities=30%  Similarity=0.403  Sum_probs=153.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      +++++.++. +...++||||+++++|.+++.... ..+++.++..++.|++.||+|||++   +|+|+||||+||+++++
T Consensus        63 i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~  138 (260)
T cd05070          63 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDG  138 (260)
T ss_pred             eEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCC
Confidence            666766664 566899999999999999997643 3588999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.++|+|||++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.....    .....
T Consensus       139 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~----~~~~~  214 (260)
T cd05070         139 LVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN----REVLE  214 (260)
T ss_pred             ceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH----HHHHH
Confidence            999999999998764433222223345668999999888889999999999999999999 8899964311    11111


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                          .....     .....+...+..+.+++.+||+.+|++|||++++.+.|+.
T Consensus       215 ----~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         215 ----QVERG-----YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             ----HHHcC-----CCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence                11111     0111223445679999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=5.5e-29  Score=274.85  Aligned_cols=231  Identities=18%  Similarity=0.128  Sum_probs=167.4

Q ss_pred             ccccceEEEeEE--EEEeeeeh--hhhHhh---------------------eeeEEEEEecCCeeEEEEecCCCCCHHHH
Q 038002          445 VNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------ISSLLVYKHRSSKKLLVYEFMSKGSLADL  499 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------i~~l~~~~~~~~~~~lV~e~~~~gsL~~~  499 (702)
                      +...+.||+|++  ||++....  ..||+|                     |++++.++..++..++|||++. ++|.++
T Consensus       171 y~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~  249 (461)
T PHA03211        171 FAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTY  249 (461)
T ss_pred             eEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHH
Confidence            334566777766  67766543  445554                     7888899999999999999995 699998


Q ss_pred             hhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc-eeeceeccc
Q 038002          500 LFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSR  578 (702)
Q Consensus       500 l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~  578 (702)
                      +......+++.+++.++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++........ ......||+
T Consensus       250 l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~  326 (461)
T PHA03211        250 LGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTV  326 (461)
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCc
Confidence            876655799999999999999999999999   9999999999999999999999999999876433221 123456999


Q ss_pred             cccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcch----hhhHHHHHHh-hhcccccccc----------
Q 038002          579 GYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE----VLLSTWVYNC-FVAGEFNKLV----------  643 (702)
Q Consensus       579 ~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~----------  643 (702)
                      .|+|||++.+..++.++|||||||++|||++|..|+.........    ..+...+... .....+....          
T Consensus       327 ~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~  406 (461)
T PHA03211        327 DTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRH  406 (461)
T ss_pred             CCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHh
Confidence            999999999889999999999999999999988765332111110    0111111100 0000000000          


Q ss_pred             ------cc-----cc--CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          644 ------EE-----EV--DKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       644 ------~~-----~~--~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                            ..     ..  .......+.+|+.+||+.||++|||+.|+++.
T Consensus       407 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        407 RAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             hhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence                  00     00  00123468889999999999999999999974

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.96  E-value=5.5e-29  Score=256.72  Aligned_cols=196  Identities=29%  Similarity=0.402  Sum_probs=153.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++..+. ++..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+.   +|+|+||||+||+++++
T Consensus        63 i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~  138 (262)
T cd05071          63 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGEN  138 (262)
T ss_pred             cceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCC
Confidence            666666554 566899999999999999997643 3578999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.+||+|||.+..+............++..|+|||...+..++.++||||||+++|||++ |..||......  + .   
T Consensus       139 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--~-~---  212 (262)
T cd05071         139 LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--E-V---  212 (262)
T ss_pred             CcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--H-H---
Confidence            999999999998764433222223446678999999988889999999999999999999 88888643111  1 1   


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                        ........     ........+..+.+++.+|++.||++||+++++++.|+..
T Consensus       213 --~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         213 --LDQVERGY-----RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             --HHHHhcCC-----CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence              11111110     0112234566788999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.96  E-value=6.3e-29  Score=255.79  Aligned_cols=195  Identities=28%  Similarity=0.434  Sum_probs=153.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++..+ ..+..++||||+++++|.+++.... ..+++.++..++.|++.||+|||+.   +++|+||||+||+++++
T Consensus        63 i~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~  138 (260)
T cd05067          63 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSET  138 (260)
T ss_pred             eeeEEEEE-ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCC
Confidence            66666665 4567899999999999999987543 3588999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.++|+|||++...............++..|+|||.+....++.++||||||+++|||++ |+.||......    ... 
T Consensus       139 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~-  213 (260)
T cd05067         139 LCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP----EVI-  213 (260)
T ss_pred             CCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH----HHH-
Confidence            999999999998765333222223445678999999988889999999999999999999 99999643211    011 


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                         .......     ....+...+.++.+++.+||+.+|++||+++++++.|+.
T Consensus       214 ---~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         214 ---QNLERGY-----RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             ---HHHHcCC-----CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence               1111110     011222345679999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.96  E-value=7.7e-29  Score=255.99  Aligned_cols=200  Identities=20%  Similarity=0.292  Sum_probs=158.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  547 (702)
                      |+++++++...+..++||||+++++|.+++...   ...+++.++..++.|++.||+|||++   +++|+||||+||+++
T Consensus        64 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~  140 (267)
T cd08228          64 VIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFIT  140 (267)
T ss_pred             eeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEc
Confidence            777888888899999999999999999988642   23478899999999999999999999   999999999999999


Q ss_pred             CCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          548 DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      .++.++|+|||++........ ......+++.|+|||.+.+..++.++|+||||+++|||++|+.||.........  . 
T Consensus       141 ~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~--~-  216 (267)
T cd08228         141 ATGVVKLGDLGLGRFFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFS--L-  216 (267)
T ss_pred             CCCCEEECccccceeccchhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHH--H-
Confidence            999999999999887643221 122345788999999998888899999999999999999999999643211111  1 


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                         ..........    +.........+.+++.+||+.+|++||+++++++.|+++.
T Consensus       217 ---~~~~~~~~~~----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         217 ---CQKIEQCDYP----PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             ---HHHHhcCCCC----CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence               1111111111    1112345577899999999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.96  E-value=5.6e-29  Score=260.84  Aligned_cols=198  Identities=29%  Similarity=0.378  Sum_probs=156.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC---------------CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL---------------ETRPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                      |+++++++..++..++||||+++|+|.+++...               ...+++..++.++.|++.||+|||+.   +|+
T Consensus        78 i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~iv  154 (293)
T cd05053          78 IINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCI  154 (293)
T ss_pred             eeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence            778888889999999999999999999999642               23578899999999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcC
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSN  613 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~P  613 (702)
                      |+||||+||+++.++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..|
T Consensus       155 H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p  234 (293)
T cd05053         155 HRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP  234 (293)
T ss_pred             ccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCC
Confidence            99999999999999999999999998764322111 122334668999999988889999999999999999997 9999


Q ss_pred             CcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          614 FEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       614 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      |.....  .+      .......+...     ..+......+.+++.+||+.||++|||++|+++.|+.+.
T Consensus       235 ~~~~~~--~~------~~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         235 YPGIPV--EE------LFKLLKEGYRM-----EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             CCCCCH--HH------HHHHHHcCCcC-----CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            864311  11      11111111111     122234567889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=7.1e-29  Score=255.51  Aligned_cols=193  Identities=21%  Similarity=0.249  Sum_probs=154.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++++++..++||||+++++|.+++.... .+++..+..++.|++.||+|||+.   +|+|+||+|+||++++++
T Consensus        66 i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~  141 (263)
T cd06625          66 IVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAG  141 (263)
T ss_pred             eeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCC
Confidence            7888899999999999999999999999997654 588899999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCcee--eceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIV--AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      .++|+|||++...........  ....++..|+|||.+.+..++.++||||||+++|||++|+.||......   ..   
T Consensus       142 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~---  215 (263)
T cd06625         142 NVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM---AA---  215 (263)
T ss_pred             CEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH---HH---
Confidence            999999999986533221111  2345788999999998888999999999999999999999999643111   00   


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                       .... .....    ....+......+.+++.+||+.+|++|||++++++.
T Consensus       216 -~~~~-~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         216 -IFKI-ATQPT----NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             -HHHH-hccCC----CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence             0110 11111    112233456678899999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.96  E-value=2.3e-29  Score=272.05  Aligned_cols=194  Identities=20%  Similarity=0.234  Sum_probs=147.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+++++..++||||+++|+|.+++.+.. .+++..+..++.|++.||+|||++   +|+||||||+|||++.++
T Consensus        63 iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~  138 (360)
T cd05627          63 VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKG  138 (360)
T ss_pred             EeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCC
Confidence            6778889999999999999999999999997654 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCC----------------------------------ceeeceeccccccCcccccCCCCCcccc
Q 038002          551 RAKISDFGLAKLLMPNQT----------------------------------GIVAGVRGSRGYMAPEWQNSGLITVKSD  596 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~D  596 (702)
                      .+||+|||++........                                  .......||+.|+|||++.+..++.++|
T Consensus       139 ~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~D  218 (360)
T cd05627         139 HVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCD  218 (360)
T ss_pred             CEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcce
Confidence            999999999875422110                                  0012346899999999999999999999


Q ss_pred             ccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCC---H
Q 038002          597 VYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPS---M  673 (702)
Q Consensus       597 iwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt---~  673 (702)
                      ||||||++|||++|+.||.......        .............+.+.  ......+.+++.+++. ||.+|++   +
T Consensus       219 iwSlGvilyel~tG~~Pf~~~~~~~--------~~~~i~~~~~~~~~p~~--~~~s~~~~~li~~l~~-~p~~R~~~~~~  287 (360)
T cd05627         219 WWSLGVIMYEMLIGYPPFCSETPQE--------TYRKVMNWKETLVFPPE--VPISEKAKDLILRFCT-DSENRIGSNGV  287 (360)
T ss_pred             eccccceeeecccCCCCCCCCCHHH--------HHHHHHcCCCceecCCC--CCCCHHHHHHHHHhcc-ChhhcCCCCCH
Confidence            9999999999999999996542111        01111110000001111  1235567778877765 9999986   5


Q ss_pred             HHHHHH
Q 038002          674 KNVILM  679 (702)
Q Consensus       674 ~evl~~  679 (702)
                      +|+++.
T Consensus       288 ~ei~~h  293 (360)
T cd05627         288 EEIKSH  293 (360)
T ss_pred             HHHhcC
Confidence            666553

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.96  E-value=4.6e-29  Score=256.41  Aligned_cols=194  Identities=26%  Similarity=0.323  Sum_probs=152.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++++++ ++..++||||+++++|.+++.... .+++..+..++.|++.||+|||++   +|+||||||.||+++.++
T Consensus        58 i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~  132 (257)
T cd05116          58 IVRMIGICE-AESWMLVMELAELGPLNKFLQKNK-HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQH  132 (257)
T ss_pred             cceEEEEEc-CCCcEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCC
Confidence            677777664 557799999999999999997654 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCcee--eceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIV--AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~  627 (702)
                      .+||+|||++...........  ....++..|+|||.+....++.++||||||+++|||++ |..||.....    ....
T Consensus       133 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----~~~~  208 (257)
T cd05116         133 YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG----NEVT  208 (257)
T ss_pred             eEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH----HHHH
Confidence            999999999987644332111  12234578999999888888999999999999999998 9999964311    1111


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                          .....+..     ...+...+..+.+++.+||+.||++||++++|.++|++
T Consensus       209 ----~~i~~~~~-----~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         209 ----QMIESGER-----MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             ----HHHHCCCC-----CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence                11111111     11222345678899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=5.5e-29  Score=258.51  Aligned_cols=196  Identities=25%  Similarity=0.416  Sum_probs=155.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKL  541 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp  541 (702)
                      |+++++++..++..++||||+++++|.+++....         ..+++..+..++.|++.||+|||+.   +|+|+||||
T Consensus        71 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p  147 (277)
T cd05032          71 VVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAA  147 (277)
T ss_pred             eeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCh
Confidence            7888999999999999999999999999996532         1367889999999999999999999   999999999


Q ss_pred             CcEEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCC
Q 038002          542 RNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVS  619 (702)
Q Consensus       542 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~  619 (702)
                      +||+++.++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++||+++ |..||.....
T Consensus       148 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  227 (277)
T cd05032         148 RNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN  227 (277)
T ss_pred             heEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH
Confidence            9999999999999999998765433221 1223346788999999988889999999999999999998 9999864311


Q ss_pred             CcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          620 TADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                          .....    ....+...     ..+...+..+.+++.+||+.+|++|||+.++++.|+.
T Consensus       228 ----~~~~~----~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         228 ----EEVLK----FVIDGGHL-----DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             ----HHHHH----HHhcCCCC-----CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence                11111    11111111     1122236788999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=3.9e-29  Score=267.65  Aligned_cols=204  Identities=19%  Similarity=0.239  Sum_probs=145.6

Q ss_pred             eeeEEEEEec-----CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEE
Q 038002          471 ISSLLVYKHR-----SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL  545 (702)
Q Consensus       471 i~~l~~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIl  545 (702)
                      |+++++++..     ....|+||||+. ++|.+++.... .+++..+..++.||++||+|||++   +|+||||||+|||
T Consensus        61 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl  135 (338)
T cd07859          61 IVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNIL  135 (338)
T ss_pred             EeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeE
Confidence            5555554432     235899999995 69999987654 689999999999999999999999   9999999999999


Q ss_pred             EeCCCcEEEecccceeecCCCCC--ceeeceeccccccCcccccC--CCCCccccccchhHhHHHhhhCCcCCcCCCCCc
Q 038002          546 IDDSWRAKISDFGLAKLLMPNQT--GIVAGVRGSRGYMAPEWQNS--GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTA  621 (702)
Q Consensus       546 l~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~  621 (702)
                      ++.++.+||+|||+++.......  .......|++.|+|||++.+  ..++.++|||||||++|||++|+.||.......
T Consensus       136 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~  215 (338)
T cd07859         136 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH  215 (338)
T ss_pred             ECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH
Confidence            99999999999999986532221  11234568999999998865  678999999999999999999999996542110


Q ss_pred             chhhhHHH-------HHHhhhccccccc---ccc-------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          622 DEVLLSTW-------VYNCFVAGEFNKL---VEE-------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       622 ~~~~~~~~-------~~~~~~~~~~~~~---~~~-------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ........       ....+........   +..       ...+.....+.+++.+||+.||++|||++|+++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         216 QLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             HHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            00000000       0000000000000   000       0011234567899999999999999999999974

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.96  E-value=1.5e-28  Score=253.96  Aligned_cols=197  Identities=24%  Similarity=0.349  Sum_probs=157.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++.+.+...+..++||||+++++|.+++......+++.++..++.|++.||+|||+.   +++|+||||+||+++.++
T Consensus        68 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~  144 (268)
T cd05063          68 IIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNL  144 (268)
T ss_pred             eeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCC
Confidence            77888899999999999999999999999987666789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceee--ceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVA--GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~  627 (702)
                      .+||+|||++............  ....+..|+|||.+....++.++||||||+++|||++ |+.||.....   ..   
T Consensus       145 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~---~~---  218 (268)
T cd05063         145 ECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN---HE---  218 (268)
T ss_pred             cEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH---HH---
Confidence            9999999999866433221111  1223457999999988889999999999999999997 9999964311   11   


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                        ....+....     ...........+.+++.+||+.+|++||++++|++.|+++
T Consensus       219 --~~~~i~~~~-----~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         219 --VMKAINDGF-----RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             --HHHHHhcCC-----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence              111111110     0111123456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=4.5e-29  Score=269.32  Aligned_cols=164  Identities=23%  Similarity=0.258  Sum_probs=136.8

Q ss_pred             ccccceEEEeEE--EEEeeeeh--hhhHhh---------------------eeeEEEEEecCCeeEEEEecCCCCCHHHH
Q 038002          445 VNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------ISSLLVYKHRSSKKLLVYEFMSKGSLADL  499 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------i~~l~~~~~~~~~~~lV~e~~~~gsL~~~  499 (702)
                      ++..+.||+|++  ||++....  ..||+|                     |++++.++..++..++|||++. ++|.++
T Consensus        68 y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~  146 (357)
T PHA03209         68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTY  146 (357)
T ss_pred             cEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHH
Confidence            445567777776  77766543  445555                     7888888899999999999995 589998


Q ss_pred             hhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeeceecccc
Q 038002          500 LFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG  579 (702)
Q Consensus       500 l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~  579 (702)
                      +......+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||++.......  ......||+.
T Consensus       147 l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--~~~~~~gt~~  221 (357)
T PHA03209        147 LTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP--AFLGLAGTVE  221 (357)
T ss_pred             HHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccCc--cccccccccc
Confidence            877666799999999999999999999999   99999999999999999999999999987532221  2234568999


Q ss_pred             ccCcccccCCCCCccccccchhHhHHHhhhCCcCC
Q 038002          580 YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF  614 (702)
Q Consensus       580 y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf  614 (702)
                      |+|||++.+..++.++|||||||++|||+++..|+
T Consensus       222 y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        222 TNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             ccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            99999999889999999999999999999866554

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.96  E-value=5.3e-29  Score=263.36  Aligned_cols=203  Identities=19%  Similarity=0.244  Sum_probs=151.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..++..++||||+++ +|.+++......+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        66 iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~  141 (309)
T cd07872          66 IVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERG  141 (309)
T ss_pred             cceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCC
Confidence            78888899999999999999975 89988877665688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++........ ......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||......+........
T Consensus       142 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~  220 (309)
T cd07872         142 ELKLADFGLARAKSVPTK-TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRL  220 (309)
T ss_pred             CEEECccccceecCCCcc-ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            999999999976433221 2233457899999998754 56889999999999999999999999754221111000000


Q ss_pred             -------HHHhhhc------ccccccccc---ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 -------VYNCFVA------GEFNKLVEE---EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 -------~~~~~~~------~~~~~~~~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                             .+.....      .........   .........+.+++.+||+.||++|||++|+++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         221 LGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             hCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence                   0000000      000000000   011224567889999999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.96  E-value=9.5e-29  Score=254.49  Aligned_cols=195  Identities=30%  Similarity=0.443  Sum_probs=152.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      +++++.++. ++..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+.   +++|+||||+||+++++
T Consensus        63 i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~  138 (260)
T cd05069          63 LVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDN  138 (260)
T ss_pred             eeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCC
Confidence            566666654 567899999999999999997643 3478999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.++|+|||++...............++..|+|||...+..++.++||||||+++|||++ |..||.....   ...   
T Consensus       139 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~---  212 (260)
T cd05069         139 LVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN---REV---  212 (260)
T ss_pred             CeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHH---
Confidence            999999999998764333222223345678999999988889999999999999999999 8999864311   111   


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                        ....... .    ....+...+..+.+++.+||+.||++||++++|++.|+.
T Consensus       213 --~~~~~~~-~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         213 --LEQVERG-Y----RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             --HHHHHcC-C----CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence              1111111 1    111223446778999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.96  E-value=4.1e-29  Score=262.68  Aligned_cols=201  Identities=28%  Similarity=0.358  Sum_probs=155.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                      |+++++.+...+..++||||+++++|.+++....               ..+++..++.++.|++.||+|||++   +|+
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~iv  141 (297)
T cd05089          65 IINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFI  141 (297)
T ss_pred             hhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence            6677888888999999999999999999996532               2477889999999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCC
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNF  614 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf  614 (702)
                      ||||||+||++++++.+||+|||++........  ......+..|+|||.+....++.++||||||+++|||++ |..||
T Consensus       142 H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf  219 (297)
T cd05089         142 HRDLAARNVLVGENLASKIADFGLSRGEEVYVK--KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPY  219 (297)
T ss_pred             cCcCCcceEEECCCCeEEECCcCCCccccceec--cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence            999999999999999999999999864321111  111223457999999988889999999999999999997 99999


Q ss_pred             cCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCCCC
Q 038002          615 EVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPIL  689 (702)
Q Consensus       615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~~p  689 (702)
                      ......  .      .......+.     ....+...+..+.+++.+||+.+|.+||++++++++|+.+.+...+
T Consensus       220 ~~~~~~--~------~~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~  281 (297)
T cd05089         220 CGMTCA--E------LYEKLPQGY-----RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA  281 (297)
T ss_pred             CCCCHH--H------HHHHHhcCC-----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence            643111  0      111111111     1112223456788999999999999999999999999887654444

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.96  E-value=1.5e-28  Score=253.67  Aligned_cols=200  Identities=21%  Similarity=0.312  Sum_probs=158.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  547 (702)
                      |++++..+..++..++||||+++++|.+++...   ...+++.++..++.|++.||+|||+.   +|+|+||+|+||+++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~  140 (267)
T cd08224          64 VIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFIT  140 (267)
T ss_pred             eeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEEC
Confidence            777888888899999999999999999998642   33478999999999999999999999   999999999999999


Q ss_pred             CCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          548 DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      .++.++|+|||++........ ......++..|+|||.+.+..++.++|+||||+++|+|++|+.||......     ..
T Consensus       141 ~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~  214 (267)
T cd08224         141 ATGVVKLGDLGLGRFFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-----LY  214 (267)
T ss_pred             CCCcEEEeccceeeeccCCCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc-----HH
Confidence            999999999999886543221 123345788999999998888999999999999999999999999644211     00


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      . .......+....    .........+.+++.+||+.+|++||++.+|+++|+.+.
T Consensus       215 ~-~~~~~~~~~~~~----~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         215 S-LCKKIEKCDYPP----LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             H-HHhhhhcCCCCC----CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            0 111111111111    111245667889999999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.96  E-value=7.8e-29  Score=257.91  Aligned_cols=200  Identities=25%  Similarity=0.326  Sum_probs=156.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++.. ...+++|||+++|+|.+++......+++.++..++.|++.||+|||++   +|+||||||+||++++++
T Consensus        71 i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~  146 (279)
T cd05109          71 VCRLLGICLT-STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPN  146 (279)
T ss_pred             CceEEEEEcC-CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCC
Confidence            6666666654 457899999999999999987665789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          551 RAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      .+||+|||+++......... .....++..|+|||...+..++.++||||||+++|||++ |..||.....    .....
T Consensus       147 ~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----~~~~~  222 (279)
T cd05109         147 HVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA----REIPD  222 (279)
T ss_pred             cEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHH
Confidence            99999999998764333211 112234678999999988889999999999999999998 8999864311    11111


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP  687 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~  687 (702)
                      .    ...+..     ...+......+.+++.+||+.||++||++.++++.|+.+...+
T Consensus       223 ~----~~~~~~-----~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         223 L----LEKGER-----LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             H----HHCCCc-----CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence            1    111111     0112234567889999999999999999999999998876554

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.96  E-value=7.6e-29  Score=264.75  Aligned_cols=192  Identities=24%  Similarity=0.280  Sum_probs=162.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC--
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD--  548 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~--  548 (702)
                      |+.+...|++.+..++|||++.||.|.+.+...  .+++.++..++.|++.+++|||+.   ||+||||||+|+|+..  
T Consensus        98 iv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~  172 (382)
T KOG0032|consen   98 IVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKD  172 (382)
T ss_pred             EEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeecccc
Confidence            889999999999999999999999999999876  399999999999999999999999   9999999999999943  


Q ss_pred             --CCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          549 --SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       549 --~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                        ++.+|++|||++.....  .......+||+.|+|||++....|+..+||||+|+++|.|++|..||..........  
T Consensus       173 ~~~~~ik~~DFGla~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~--  248 (382)
T KOG0032|consen  173 EGSGRIKLIDFGLAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL--  248 (382)
T ss_pred             CCCCcEEEeeCCCceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH--
Confidence              35799999999998765  445677899999999999999999999999999999999999999997653221111  


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                            .+..+++  .+..+.-...+..+.+++..||..||.+|+|+.++++.
T Consensus       249 ------~i~~~~~--~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  249 ------AILRGDF--DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             ------HHHcCCC--CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence                  2223322  22223344568889999999999999999999999985

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.96  E-value=5.2e-29  Score=259.12  Aligned_cols=196  Identities=23%  Similarity=0.370  Sum_probs=155.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEec
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHC  537 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~  537 (702)
                      |++++.++..+...++||||+++++|.+++....             ..+++.++..++.|++.||+|||++   +++|+
T Consensus        70 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~  146 (280)
T cd05049          70 IVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHR  146 (280)
T ss_pred             chheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---Ceecc
Confidence            7778888889999999999999999999997542             2467889999999999999999999   99999


Q ss_pred             CCCCCcEEEeCCCcEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCc
Q 038002          538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFE  615 (702)
Q Consensus       538 dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~  615 (702)
                      ||||+||+++.++.+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |..||.
T Consensus       147 dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~  226 (280)
T cd05049         147 DLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWY  226 (280)
T ss_pred             ccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCC
Confidence            9999999999999999999999976532221 11223345778999999998999999999999999999998 999986


Q ss_pred             CCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          616 VNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      .....    ..    ......+...     ..+...+..+.+++.+||+.||++||+++||+++|++
T Consensus       227 ~~~~~----~~----~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         227 GLSNE----EV----IECITQGRLL-----QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             CCCHH----HH----HHHHHcCCcC-----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence            43111    11    1111122111     1122345678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.96  E-value=7.3e-29  Score=257.92  Aligned_cols=196  Identities=27%  Similarity=0.343  Sum_probs=152.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |++++.++.+.+..++||||+++++|.+++....      ..+++.+++.++.||+.||+|||++   +++|+||||+||
T Consensus        71 i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~ni  147 (277)
T cd05036          71 IVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNC  147 (277)
T ss_pred             EeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheE
Confidence            7888888888899999999999999999997653      2478899999999999999999999   999999999999


Q ss_pred             EEeCCC---cEEEecccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCC
Q 038002          545 LIDDSW---RAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVS  619 (702)
Q Consensus       545 ll~~~~---~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~  619 (702)
                      +++.++   .+||+|||+++......... ......+..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus       148 l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~  227 (277)
T cd05036         148 LLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN  227 (277)
T ss_pred             EEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence            998765   59999999998763222111 112223567999999988889999999999999999997 9999964321


Q ss_pred             CcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          620 TADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      .  +  ....    ......     ...+...+..+.+++.+||+.+|++||++.+|++.|+.
T Consensus       228 ~--~--~~~~----~~~~~~-----~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~  277 (277)
T cd05036         228 Q--E--VMEF----VTGGGR-----LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY  277 (277)
T ss_pred             H--H--HHHH----HHcCCc-----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence            1  1  1111    111100     01122335678899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.96  E-value=8.6e-29  Score=253.95  Aligned_cols=195  Identities=26%  Similarity=0.424  Sum_probs=155.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+......++||||+++++|.+++......++++.+..++.|++.+|+|||+.   +++|+||||+||+++.++
T Consensus        61 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~  137 (256)
T cd05112          61 LVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQ  137 (256)
T ss_pred             eeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCC
Confidence            77888889999999999999999999999987665688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.....   .. .   
T Consensus       138 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~-~---  210 (256)
T cd05112         138 VVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN---SE-V---  210 (256)
T ss_pred             eEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH---HH-H---
Confidence            99999999998654332221222334678999999988889999999999999999998 9999964311   11 1   


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                       ......+ ...    ..+....+.+.+++.+||+.+|++||++++++++|.
T Consensus       211 -~~~~~~~-~~~----~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         211 -VETINAG-FRL----YKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             -HHHHhCC-CCC----CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence             1111111 000    111223567999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.96  E-value=8.9e-29  Score=253.94  Aligned_cols=195  Identities=29%  Similarity=0.422  Sum_probs=158.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL--------ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR  542 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~  542 (702)
                      |++++.++.+++..++||||+++++|.+++...        ...+++.++..++.|++.||+|||++   +++|+||||+
T Consensus        58 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~  134 (262)
T cd00192          58 VVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAAR  134 (262)
T ss_pred             hheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcc
Confidence            677888888899999999999999999999876        35789999999999999999999999   9999999999


Q ss_pred             cEEEeCCCcEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCC
Q 038002          543 NILIDDSWRAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVST  620 (702)
Q Consensus       543 NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~  620 (702)
                      ||+++.++.+||+|||.+........ .......++..|+|||.+....++.++||||||+++|||++ |..||..... 
T Consensus       135 nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-  213 (262)
T cd00192         135 NCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-  213 (262)
T ss_pred             eEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-
Confidence            99999999999999999987654331 11233457889999999888889999999999999999999 6999965411 


Q ss_pred             cchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          621 ADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                         ..    .......+.     ....+...+.++.+++.+||+.+|++||+++|+++.|+
T Consensus       214 ---~~----~~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         214 ---EE----VLEYLRKGY-----RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             ---HH----HHHHHHcCC-----CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence               11    111111111     11222334678999999999999999999999999885

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.96  E-value=9.4e-29  Score=254.26  Aligned_cols=196  Identities=23%  Similarity=0.283  Sum_probs=154.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.++ .+..++||||+++++|.+++......+++.+++.++.|++.||+|||++   +++|+||||+||+++.++
T Consensus        57 ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~  132 (257)
T cd05115          57 IVRMIGVCE-AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQH  132 (257)
T ss_pred             eEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCC
Confidence            677777765 4578999999999999999986665789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCcee--eceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIV--AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~  627 (702)
                      .+||+|||++...........  ....++..|+|||.+....++.++||||||+++||+++ |..||......    .  
T Consensus       133 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~--  206 (257)
T cd05115         133 YAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP----E--  206 (257)
T ss_pred             cEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH----H--
Confidence            999999999986543322111  11223568999999888889999999999999999996 99999643111    0  


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                        .......+..     ...+....+.+.+++.+||+.+|++||++.+|.+.|+..
T Consensus       207 --~~~~~~~~~~-----~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         207 --VMSFIEQGKR-----LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             --HHHHHHCCCC-----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence              1111111111     112233467888999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.96  E-value=4.5e-29  Score=256.28  Aligned_cols=220  Identities=24%  Similarity=0.307  Sum_probs=169.6

Q ss_pred             ccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          447 DKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      ..+.||+|++  ||++....  ..+|+|                             |++++.++..++..++|||++++
T Consensus         3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~   82 (260)
T PF00069_consen    3 LVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPG   82 (260)
T ss_dssp             EEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETT
T ss_pred             EeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccc
Confidence            3467788876  77776655  346665                             78888999999999999999999


Q ss_pred             CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeec
Q 038002          494 GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG  573 (702)
Q Consensus       494 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  573 (702)
                      ++|.+++.... .+++.++..++.||++||++||++   +|+|+||||+||+++.++.++|+|||.+... .........
T Consensus        83 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~-~~~~~~~~~  157 (260)
T PF00069_consen   83 GSLQDYLQKNK-PLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKL-SENNENFNP  157 (260)
T ss_dssp             EBHHHHHHHHS-SBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEES-TSTTSEBSS
T ss_pred             ccccccccccc-cccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc-ccccccccc
Confidence            99999998333 689999999999999999999999   9999999999999999999999999999865 222233445


Q ss_pred             eeccccccCccccc-CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHH
Q 038002          574 VRGSRGYMAPEWQN-SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL  652 (702)
Q Consensus       574 ~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  652 (702)
                      ..++..|+|||++. +...+.++||||+|+++++|++|..||..............     ............  .....
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~  230 (260)
T PF00069_consen  158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEK-----ILKRPLPSSSQQ--SREKS  230 (260)
T ss_dssp             SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHH-----HHHTHHHHHTTS--HTTSH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhh-----cccccccccccc--cchhH
Confidence            66899999999988 88899999999999999999999999975410011111110     010000000000  00113


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          653 ERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       653 ~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..+.+++.+||+.||++||+++++++
T Consensus       231 ~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  231 EELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            78999999999999999999999985

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.96  E-value=7.4e-29  Score=263.10  Aligned_cols=198  Identities=24%  Similarity=0.348  Sum_probs=154.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++..+ ..++|+||+++|+|.+++......+++..+..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        71 iv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~  146 (316)
T cd05108          71 VCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQ  146 (316)
T ss_pred             CCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCC
Confidence            67777777654 57899999999999999987766788999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          551 RAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      .+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||.....  .+  +..
T Consensus       147 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~--~~--~~~  222 (316)
T cd05108         147 HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SE--ISS  222 (316)
T ss_pred             cEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HH--HHH
Confidence            99999999998765433221 122234668999999998899999999999999999998 9999964311  11  111


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                          ....+.. .    ..+......+.+++.+||+.+|++||++.+++..|..+..
T Consensus       223 ----~~~~~~~-~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~  270 (316)
T cd05108         223 ----ILEKGER-L----PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  270 (316)
T ss_pred             ----HHhCCCC-C----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence                1111110 0    1112234568889999999999999999999999986543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.2e-28  Score=252.88  Aligned_cols=193  Identities=29%  Similarity=0.378  Sum_probs=155.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++.+..++..++||||+++++|.+++..... .+++..+..++.|++.||+|||++   +++|+||||+||+++.+
T Consensus        62 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~  138 (256)
T cd05039          62 LVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSED  138 (256)
T ss_pred             eeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCC
Confidence            77888888889999999999999999999976543 589999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.+||+|||.+........    ....+..|+|||.+....++.++||||||+++||+++ |..||.....  .  .+  
T Consensus       139 ~~~~l~d~g~~~~~~~~~~----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~--~~--  208 (256)
T cd05039         139 LVAKVSDFGLAKEASQGQD----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--K--DV--  208 (256)
T ss_pred             CCEEEcccccccccccccc----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH--H--HH--
Confidence            9999999999986632221    2234567999999988889999999999999999997 9999864311  1  11  


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                        ....... .    ....+...++.+.+++.+||+.+|++||+++|++++|+++
T Consensus       209 --~~~~~~~-~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         209 --VPHVEKG-Y----RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             --HHHHhcC-C----CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence              1111111 0    0111223457889999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.96  E-value=1.7e-28  Score=257.60  Aligned_cols=203  Identities=23%  Similarity=0.333  Sum_probs=156.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC----------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE----------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIK  540 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlk  540 (702)
                      |++++.++..++..++||||+++++|.+++....          ..+++..++.++.|++.||+|||++   +|+|+|||
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlk  157 (296)
T cd05051          81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLA  157 (296)
T ss_pred             EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccc
Confidence            7888889999999999999999999999997643          2578999999999999999999999   99999999


Q ss_pred             CCcEEEeCCCcEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh--CCcCCcCC
Q 038002          541 LRNILIDDSWRAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC--CRSNFEVN  617 (702)
Q Consensus       541 p~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt--G~~Pf~~~  617 (702)
                      |+||+++.++.++|+|||++........ .......+++.|+|||.+.+..++.++||||||+++|||++  +..||...
T Consensus       158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~  237 (296)
T cd05051         158 TRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL  237 (296)
T ss_pred             hhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence            9999999999999999999986533221 12223456778999999888889999999999999999998  67777533


Q ss_pred             CCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          618 VSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      .  . ...+ ................  ..+...+.++.+++.+||+.||++|||+.||++.|+.
T Consensus       238 ~--~-~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         238 T--D-QQVI-ENAGHFFRDDGRQIYL--PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             C--h-HHHH-HHHHhccccccccccC--CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence            1  1 1111 1111111111111111  1122345689999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.96  E-value=1.6e-28  Score=252.89  Aligned_cols=195  Identities=27%  Similarity=0.424  Sum_probs=153.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++...+.+ ...++||||+++++|.+++... ....++.++..++.|++.||+|||+.   +++|+||||+||+++.+
T Consensus        63 i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~  138 (260)
T cd05073          63 LVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSAS  138 (260)
T ss_pred             cceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCC
Confidence            6677777666 7889999999999999999764 33578889999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.+||+|||.+...............++..|+|||.+....++.++|+||||+++|++++ |+.||......    ....
T Consensus       139 ~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~----~~~~  214 (260)
T cd05073         139 LVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----EVIR  214 (260)
T ss_pred             CcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH----HHHH
Confidence            999999999998664332222223345678999999988889999999999999999999 89999643111    1111


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                          ....+..     .......+..+.+++.+||+.+|++||++.+++++|+.
T Consensus       215 ----~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         215 ----ALERGYR-----MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             ----HHhCCCC-----CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence                1111110     01122345678899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.96  E-value=1.2e-28  Score=257.61  Aligned_cols=201  Identities=21%  Similarity=0.222  Sum_probs=147.8

Q ss_pred             eeeEEEEEec-----CCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKHR-----SSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |++++.++..     ....++||||+++ +|.+++.... ..+++.++..++.|++.||+|||++   +|+|+||||+||
T Consensus        64 i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Ni  139 (288)
T cd07863          64 IVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENI  139 (288)
T ss_pred             eeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHE
Confidence            5666655543     4568999999975 8999887643 3489999999999999999999999   999999999999


Q ss_pred             EEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       545 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      +++.++.+||+|||++........  .....++..|+|||.+.+..++.++|||||||++|||++|+.||..........
T Consensus       140 li~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~  217 (288)
T cd07863         140 LVTSGGQVKLADFGLARIYSCQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG  217 (288)
T ss_pred             EECCCCCEEECccCccccccCccc--CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHH
Confidence            999999999999999986543221  233567899999999988889999999999999999999999996442111110


Q ss_pred             hhHHHHHHhhhccccccc-------cc-------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCFVAGEFNKL-------VE-------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~~~~~~~~~-------~~-------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ...... .......+...       ..       ....+...+.+.+++.+||+.||++|||++|++.
T Consensus       218 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         218 KIFDLI-GLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             HHHHHh-CCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            100000 00000000000       00       0112234567889999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.96  E-value=1.1e-28  Score=257.68  Aligned_cols=193  Identities=27%  Similarity=0.332  Sum_probs=152.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+.+...+.+++..++||||+++++|.+++.... ..+++.++..++.|++.||.|||+.   +|+|+||||+||+++.+
T Consensus        62 i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~  138 (285)
T cd05630          62 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDH  138 (285)
T ss_pred             eeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCC
Confidence            6777788888999999999999999999986543 3588999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      +.++|+|||++........  .....|+..|+|||.+.+..++.++||||||+++|+|++|+.||...............
T Consensus       139 ~~~~l~Dfg~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~  216 (285)
T cd05630         139 GHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL  216 (285)
T ss_pred             CCEEEeeccceeecCCCcc--ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhh
Confidence            9999999999876533222  22346899999999998889999999999999999999999999754221111111000


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPS-----MKNVIL  678 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~  678 (702)
                           .. ...    ..........+.+++.+||+.||++|||     ++|+++
T Consensus       217 -----~~-~~~----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         217 -----VK-EVQ----EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             -----hh-hhh----hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence                 00 000    1112234556889999999999999999     888887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.96  E-value=2.1e-28  Score=250.82  Aligned_cols=192  Identities=26%  Similarity=0.345  Sum_probs=156.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++.+.+++..++||||+++++|.+++... ...+++..+..++.|++.||+|||+.   +++|+||||+||+++.+
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~  137 (256)
T cd08529          61 IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAY  137 (256)
T ss_pred             eehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCC
Confidence            777888889999999999999999999999775 34688999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      +.++|+|||++........ ......+++.|+|||+..+..++.++|+||||++++||++|+.||....   ...     
T Consensus       138 ~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~-----  208 (256)
T cd08529         138 DNVKIGDLGVAKLLSDNTN-FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN---QGA-----  208 (256)
T ss_pred             CCEEEcccccceeccCccc-hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---HHH-----
Confidence            9999999999987643322 2233467889999999988889999999999999999999999996442   111     


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .......+...     .........+.+++.+||+.+|++||++.++++.
T Consensus       209 ~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         209 LILKIIRGVFP-----PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHHHHHcCCCC-----CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            11111111111     1222456678999999999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.96  E-value=1.1e-28  Score=257.50  Aligned_cols=207  Identities=23%  Similarity=0.290  Sum_probs=154.3

Q ss_pred             eeeEEEEEec--CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHR--SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |+++.+++..  ....++||||+++++|.+++...  .+++.+++.++.|++.||+|||++   +|+|+||||+||+++.
T Consensus        68 i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~  142 (283)
T cd05080          68 IVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDN  142 (283)
T ss_pred             EeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcC
Confidence            6777766544  45689999999999999999754  589999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCce--eeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          549 SWRAKISDFGLAKLLMPNQTGI--VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                      ++.+||+|||++..........  .....++..|+|||.+....++.++||||||+++|||++|..|+............
T Consensus       143 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~  222 (283)
T cd05080         143 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIG  222 (283)
T ss_pred             CCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhc
Confidence            9999999999998664322211  11223456799999998888999999999999999999999998643211110000


Q ss_pred             HHHHHHhhhccccccc----cccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          627 STWVYNCFVAGEFNKL----VEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                        ..........+...    .....+...+..+.+++.+||+.+|++|||+++|+++|+.+.
T Consensus       223 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         223 --PKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             --ccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence              00000000000000    011123334578999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.4e-28  Score=252.72  Aligned_cols=196  Identities=26%  Similarity=0.322  Sum_probs=154.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++. ++..++||||+++++|.+++.... .+++..+..++.|++.||+|||..   +++|+||||+||+++.++
T Consensus        58 iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~  132 (257)
T cd05060          58 IVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRH  132 (257)
T ss_pred             eeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCC
Confidence            667776655 567899999999999999998765 789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCcee--eceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIV--AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~  627 (702)
                      .+||+|||+++..........  ....++..|+|||.+.+..++.++||||||+++|||++ |..||.....    ....
T Consensus       133 ~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~----~~~~  208 (257)
T cd05060         133 QAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG----AEVI  208 (257)
T ss_pred             cEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH----HHHH
Confidence            999999999987643332211  11223467999999988889999999999999999998 9999964311    1111


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ...    .....     ...+...+..+.+++.+||+.+|++||++.+|++.|++..
T Consensus       209 ~~~----~~~~~-----~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         209 AML----ESGER-----LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HHH----HcCCc-----CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            111    11110     1122234567889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.96  E-value=9.7e-29  Score=254.20  Aligned_cols=188  Identities=19%  Similarity=0.277  Sum_probs=148.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..++..++||||+++|+|.+++......+++..++.++.||+.||+|||+.   +|+||||||+||+++.++
T Consensus        61 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~  137 (258)
T cd05078          61 LVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREE  137 (258)
T ss_pred             hhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEeccc
Confidence            67788888888999999999999999999987665789999999999999999999999   999999999999998776


Q ss_pred             c--------EEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCC-cCCcCCCCC
Q 038002          551 R--------AKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCR-SNFEVNVST  620 (702)
Q Consensus       551 ~--------~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~-~Pf~~~~~~  620 (702)
                      .        ++++|||++......     ....++..|+|||.+.+ ..++.++||||||+++|||++|. .|+.... .
T Consensus       138 ~~~~~~~~~~~l~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~-~  211 (258)
T cd05078         138 DRKTGNPPFIKLSDPGISITVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALD-S  211 (258)
T ss_pred             ccccCCCceEEecccccccccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhcc-H
Confidence            5        699999988654321     22457889999998876 45789999999999999999985 5554321 1


Q ss_pred             cchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          621 ADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                      ...   .. .    ....      ...+......+.+++.+||+.||++|||++++++.|+
T Consensus       212 ~~~---~~-~----~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         212 QKK---LQ-F----YEDR------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHH---HH-H----HHcc------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            100   00 0    0000      0112223457889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.96  E-value=6e-29  Score=275.18  Aligned_cols=230  Identities=21%  Similarity=0.148  Sum_probs=161.4

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------eeeEEEEEec--------CCeeEEEE
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------ISSLLVYKHR--------SSKKLLVY  488 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------i~~l~~~~~~--------~~~~~lV~  488 (702)
                      .+...+.||+|+|  ||++....  ..||+|                       |+++..++..        ....++||
T Consensus        67 ~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvm  146 (440)
T PTZ00036         67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVM  146 (440)
T ss_pred             eEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEE
Confidence            4555678888887  88777643  566766                       5555554422        23577999


Q ss_pred             ecCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC-cEEEecccceeecC
Q 038002          489 EFMSKGSLADLLFN---LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW-RAKISDFGLAKLLM  564 (702)
Q Consensus       489 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg~a~~~~  564 (702)
                      ||+++ +|.+++..   ....+++..+..++.||+.||+|||++   +|+||||||+|||++.++ .+||+|||+++.+.
T Consensus       147 E~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~  222 (440)
T PTZ00036        147 EFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLL  222 (440)
T ss_pred             ecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccchhcc
Confidence            99975 77777653   234688999999999999999999999   999999999999998665 69999999998664


Q ss_pred             CCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHH----Hhh--hcc
Q 038002          565 PNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVY----NCF--VAG  637 (702)
Q Consensus       565 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~----~~~--~~~  637 (702)
                      ....  .....||+.|+|||++.+ ..++.++|||||||++|||++|..||.................    ...  ...
T Consensus       223 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~  300 (440)
T PTZ00036        223 AGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNP  300 (440)
T ss_pred             CCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhch
Confidence            3222  223567999999998765 4689999999999999999999999975422111100000000    000  000


Q ss_pred             c-----ccccc----ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          638 E-----FNKLV----EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       638 ~-----~~~~~----~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .     +....    ...++...+.++.+++.+||+.||.+|||+.|+++.
T Consensus       301 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        301 NYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             hhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence            0     00000    001122235678999999999999999999999853

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.2e-28  Score=253.72  Aligned_cols=196  Identities=31%  Similarity=0.467  Sum_probs=156.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++..+..+...++||||+++++|.+++.... ..+++.++..++.|++.||+|||++   +++|+||||+||+++++
T Consensus        63 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~  139 (261)
T cd05034          63 LVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGEN  139 (261)
T ss_pred             EeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCC
Confidence            7888888888899999999999999999997654 3688999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.+||+|||++................+..|+|||.+.+..++.++|+||||+++|||++ |+.||....   .......
T Consensus       140 ~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~---~~~~~~~  216 (261)
T cd05034         140 LVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT---NREVLEQ  216 (261)
T ss_pred             CCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHH
Confidence            999999999998764322211222334568999999988889999999999999999998 999995431   1111111


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                           .... .    ....+...+..+.+++.+||+.+|++||+++++++.|+.
T Consensus       217 -----~~~~-~----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         217 -----VERG-Y----RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             -----HHcC-C----CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence                 1111 0    111122235678999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.96  E-value=1.8e-28  Score=255.36  Aligned_cols=191  Identities=21%  Similarity=0.245  Sum_probs=152.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+.+...+..++..++||||+++++|.+++.... .+++.++..++.|++.||+|||+.   +|+|+||||+||++++++
T Consensus        59 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~  134 (279)
T cd05633          59 IVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHG  134 (279)
T ss_pred             EeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCC
Confidence            6677788888999999999999999999987654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCccccc-CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN-SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .++|+|||++.......   .....|+..|+|||.+. +..++.++||||+|+++|||++|+.||......... .... 
T Consensus       135 ~~~l~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~~-  209 (279)
T cd05633         135 HVRISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDR-  209 (279)
T ss_pred             CEEEccCCcceeccccC---ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-HHHH-
Confidence            99999999987553222   12345899999999876 456889999999999999999999999754222111 1110 


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  679 (702)
                         ...      ......+......+.+++.+||+.||++||     +++|+++.
T Consensus       210 ---~~~------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         210 ---MTL------TVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             ---Hhh------cCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence               000      011123344567889999999999999999     59999885

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.96  E-value=1e-28  Score=255.11  Aligned_cols=199  Identities=20%  Similarity=0.291  Sum_probs=157.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  547 (702)
                      |++++.++..++..++||||+++++|.+++...   ...+++..+..++.||+.||+|||++   +++|+||||+||+++
T Consensus        64 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~  140 (267)
T cd08229          64 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFIT  140 (267)
T ss_pred             hhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEc
Confidence            677778888899999999999999999998642   33578999999999999999999999   999999999999999


Q ss_pred             CCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          548 DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      .++.++|+|||++........ ......++..|+|||.+.+..++.++|+||||+++|+|++|..||........  .. 
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~-  216 (267)
T cd08229         141 ATGVVKLGDLGLGRFFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY--SL-  216 (267)
T ss_pred             CCCCEEECcchhhhccccCCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH--HH-
Confidence            999999999999876543222 22334688899999999888899999999999999999999999964321110  00 


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                         .........    .+.........+.+++.+||+.||++|||+++|++++++.
T Consensus       217 ---~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         217 ---CKKIEQCDY----PPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             ---hhhhhcCCC----CCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence               011111111    1111223566899999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.96  E-value=1.3e-28  Score=256.55  Aligned_cols=196  Identities=25%  Similarity=0.332  Sum_probs=154.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC--------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEe
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE--------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIH  536 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH  536 (702)
                      |++++.++..++..++||||+++++|.+++....              ..+++..++.++.|++.||+|||+.   +|+|
T Consensus        69 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H  145 (280)
T cd05092          69 IVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVH  145 (280)
T ss_pred             CceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---Ceec
Confidence            7788888999999999999999999999997643              2478899999999999999999999   9999


Q ss_pred             cCCCCCcEEEeCCCcEEEecccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCC
Q 038002          537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNF  614 (702)
Q Consensus       537 ~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf  614 (702)
                      +||||+||++++++.+||+|||++.......... .....+++.|+|||.+.+..++.++||||||+++|||++ |..||
T Consensus       146 ~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~  225 (280)
T cd05092         146 RDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPW  225 (280)
T ss_pred             ccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCC
Confidence            9999999999999999999999997653322111 122335678999999988889999999999999999998 89998


Q ss_pred             cCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          615 EVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      ......   ..     ......+..     ...+...+..+.+++.+||+.||++||+++||++.|++
T Consensus       226 ~~~~~~---~~-----~~~~~~~~~-----~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         226 YQLSNT---EA-----IECITQGRE-----LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             ccCCHH---HH-----HHHHHcCcc-----CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence            543111   11     111111110     01122334678899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.96  E-value=1.5e-28  Score=255.37  Aligned_cols=188  Identities=22%  Similarity=0.312  Sum_probs=148.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++.++...++||||+++|+|..++......+++..+..++.||++||+|||++   +|+||||||+||+++..+
T Consensus        78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~  154 (274)
T cd05076          78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLG  154 (274)
T ss_pred             eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccC
Confidence            88899999999999999999999999999977666789999999999999999999999   999999999999997644


Q ss_pred             -------cEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhh-hCCcCCcCCCCCc
Q 038002          551 -------RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEII-CCRSNFEVNVSTA  621 (702)
Q Consensus       551 -------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell-tG~~Pf~~~~~~~  621 (702)
                             .+|++|||++.......     ...++..|+|||.+.+ ..++.++||||||+++|||+ +|..||.......
T Consensus       155 ~~~~~~~~~kl~d~g~~~~~~~~~-----~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~  229 (274)
T cd05076         155 LAEGTSPFIKLSDPGVSFTALSRE-----ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE  229 (274)
T ss_pred             cccCccceeeecCCcccccccccc-----ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence                   38999999876442211     2246788999998865 56899999999999999995 6999986442111


Q ss_pred             chhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          622 DEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                      .    .... .  ....        .+......+.+++.+||+.+|++||++++|++.|+
T Consensus       230 ~----~~~~-~--~~~~--------~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         230 K----ERFY-E--KKHR--------LPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             H----HHHH-H--hccC--------CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            0    0100 0  0000        11112346889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.96  E-value=2.3e-28  Score=257.79  Aligned_cols=202  Identities=27%  Similarity=0.363  Sum_probs=158.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                      |++++..+...+..++||||+++++|.+++....               ..+++.++..++.||++||+|||++   +|+
T Consensus        83 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---giv  159 (304)
T cd05101          83 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCI  159 (304)
T ss_pred             chheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Cee
Confidence            6778888889999999999999999999997542               2467888999999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcC
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSN  613 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~P  613 (702)
                      |+||||+||+++.++.+||+|||+++......... .....+++.|+|||.+.+..++.++||||||+++|||++ |..|
T Consensus       160 H~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p  239 (304)
T cd05101         160 HRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP  239 (304)
T ss_pred             ecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            99999999999999999999999998764332211 122345678999999988889999999999999999998 7888


Q ss_pred             CcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCCC
Q 038002          614 FEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPI  688 (702)
Q Consensus       614 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~~  688 (702)
                      |....  ..+      .......+...     ..+...+..+.+++.+||+.+|++||++.|+++.|+++..+..
T Consensus       240 ~~~~~--~~~------~~~~~~~~~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~  301 (304)
T cd05101         240 YPGIP--VEE------LFKLLKEGHRM-----DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTT  301 (304)
T ss_pred             cccCC--HHH------HHHHHHcCCcC-----CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhh
Confidence            85431  111      11111111110     1122345678899999999999999999999999998776544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.96  E-value=1.4e-28  Score=254.28  Aligned_cols=197  Identities=25%  Similarity=0.359  Sum_probs=157.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++.++.+++..++||||+++++|.+++......+++.++..++.|++.||+|||+.   +++|+||||+||+++.++
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~  143 (267)
T cd05066          67 IIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNL  143 (267)
T ss_pred             cceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCC
Confidence            78888888999999999999999999999987665789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceee--ceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVA--GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~  627 (702)
                      .++|+|||++............  ...++..|+|||.+.+..++.++|+||||+++||+++ |..||.......    ..
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~----~~  219 (267)
T cd05066         144 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD----VI  219 (267)
T ss_pred             eEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH----HH
Confidence            9999999999876443322111  1223567999999988889999999999999999886 999996432110    11


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      .    ..... .    ........+..+.+++.+||+.+|++||+++++++.|+++
T Consensus       220 ~----~~~~~-~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         220 K----AIEEG-Y----RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             H----HHhCC-C----cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            1    11111 0    0111223456788999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.96  E-value=1.6e-28  Score=258.92  Aligned_cols=198  Identities=24%  Similarity=0.357  Sum_probs=157.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++..+...+..++||||+++++|.+++..... .+++.++..++.|++.||+|||++   +|+|+||||+||+++.+
T Consensus       101 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~  177 (302)
T cd05055         101 IVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHG  177 (302)
T ss_pred             cceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCC
Confidence            77888888999999999999999999999976432 389999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhH
Q 038002          550 WRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~  627 (702)
                      +.++|+|||++......... ......++..|+|||.+....++.++||||||+++|||++ |..||.......   ...
T Consensus       178 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~---~~~  254 (302)
T cd05055         178 KIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS---KFY  254 (302)
T ss_pred             CeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH---HHH
Confidence            99999999999866433221 1222345678999999988889999999999999999998 999986442111   111


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      .    ....+ ..    ...+.....++.+++.+||+.+|++||++.|+++.|++.
T Consensus       255 ~----~~~~~-~~----~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         255 K----LIKEG-YR----MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             H----HHHcC-Cc----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            1    11111 11    111122356789999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.96  E-value=9.4e-29  Score=268.47  Aligned_cols=204  Identities=22%  Similarity=0.275  Sum_probs=149.2

Q ss_pred             eeeEEEEEecCC-----eeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEE
Q 038002          471 ISSLLVYKHRSS-----KKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL  545 (702)
Q Consensus       471 i~~l~~~~~~~~-----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIl  545 (702)
                      |++++..+...+     ..|+||||+. ++|.+.+.... .+++..+..++.||+.||+|||++   +|+||||||+|||
T Consensus        61 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil  135 (372)
T cd07853          61 VLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLL  135 (372)
T ss_pred             cCCHhheecCCCccccceEEEEeeccc-cCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEE
Confidence            566666666665     8999999996 58888886544 689999999999999999999999   9999999999999


Q ss_pred             EeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       546 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      ++.++.+||+|||++...............+++.|+|||.+.+. .++.++|||||||++|||++|+.||..........
T Consensus       136 i~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  215 (372)
T cd07853         136 VNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLD  215 (372)
T ss_pred             ECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            99999999999999987544333333445678999999988764 57899999999999999999999997542111000


Q ss_pred             hhHHH---------------HHHhhhcc-cccccccc--ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          625 LLSTW---------------VYNCFVAG-EFNKLVEE--EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       625 ~~~~~---------------~~~~~~~~-~~~~~~~~--~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .+...               ........ ........  .......+.+.+++.+||+.||++|||++|+++.
T Consensus       216 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         216 LITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence            00000               00000000 00000000  1112235678899999999999999999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.96  E-value=1.7e-28  Score=255.86  Aligned_cols=196  Identities=26%  Similarity=0.361  Sum_probs=154.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC----------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCe
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE----------------TRPLWRDRVRIALDVARGLLYLHDECEVQI  534 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~i  534 (702)
                      |+++++++..++..++||||+++++|.+++....                ..+++.++..++.|++.||+|||++   +|
T Consensus        69 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i  145 (283)
T cd05090          69 IVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FF  145 (283)
T ss_pred             eeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---Ce
Confidence            7888889999999999999999999999985321                2367888899999999999999999   99


Q ss_pred             EecCCCCCcEEEeCCCcEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCc
Q 038002          535 IHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRS  612 (702)
Q Consensus       535 vH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~  612 (702)
                      +|+||||+||++++++.+||+|||++........ .......++..|+|||++.+..++.++||||||+++|||++ |..
T Consensus       146 ~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~  225 (283)
T cd05090         146 VHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQ  225 (283)
T ss_pred             ehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999986543321 11223345678999999988889999999999999999998 999


Q ss_pred             CCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          613 NFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       613 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      ||.....    ....    +........     ..+......+.+++.+||+.||++||++.+|+++|.+
T Consensus       226 p~~~~~~----~~~~----~~~~~~~~~-----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         226 PYYGFSN----QEVI----EMVRKRQLL-----PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             CCCCCCH----HHHH----HHHHcCCcC-----CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            9864311    1111    111111111     1122335678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.96  E-value=2e-28  Score=253.46  Aligned_cols=199  Identities=28%  Similarity=0.352  Sum_probs=148.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC----CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE----TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI  546 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  546 (702)
                      |+++++.+.+....++||||+++|+|.+++....    ...++..+..++.|++.||+|||+.   +++|+||||+||++
T Consensus        57 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~  133 (269)
T cd05087          57 LLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLL  133 (269)
T ss_pred             EeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEE
Confidence            7888888999999999999999999999997532    1356778888999999999999999   99999999999999


Q ss_pred             eCCCcEEEecccceeecCCCCCce-eeceeccccccCcccccCC-------CCCccccccchhHhHHHhhh-CCcCCcCC
Q 038002          547 DDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSG-------LITVKSDVYSFGVVLLEIIC-CRSNFEVN  617 (702)
Q Consensus       547 ~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwSlGvil~ellt-G~~Pf~~~  617 (702)
                      +.++.+||+|||++.......... .....++..|+|||++...       .++.++||||||+++|||++ |+.||...
T Consensus       134 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~  213 (269)
T cd05087         134 TADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHL  213 (269)
T ss_pred             cCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999987543322211 1234567889999987532       35789999999999999996 99999643


Q ss_pred             CCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          618 VSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                      ...  +. . ...    ..........+.......+.+.+++..|+ .+|++|||++||++.|+
T Consensus       214 ~~~--~~-~-~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         214 SDE--QV-L-TYT----VREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             ChH--HH-H-HHH----hhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            211  11 0 100    11111111122222233456778888898 58999999999999886

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.96  E-value=1.2e-28  Score=255.26  Aligned_cols=196  Identities=29%  Similarity=0.364  Sum_probs=153.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                      |+++++.+...+..++||||+++++|.+++....               ..+++.++..++.|++.||+|||+.   +++
T Consensus        58 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~  134 (270)
T cd05047          58 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFI  134 (270)
T ss_pred             eeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEe
Confidence            7788888999999999999999999999997532               2367899999999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCC
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNF  614 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf  614 (702)
                      |+||||+||++++++.+||+|||++........  ......+..|+|||++....++.++||||||+++|||++ |..||
T Consensus       135 H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf  212 (270)
T cd05047         135 HRDLAARNILVGENYVAKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY  212 (270)
T ss_pred             ecccccceEEEcCCCeEEECCCCCccccchhhh--ccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCc
Confidence            999999999999999999999999863221111  111223567999999988889999999999999999997 99999


Q ss_pred             cCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          615 EVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ......   .     .......+..     .+.+......+.+++.+||+.||.+|||++++++.|+++.
T Consensus       213 ~~~~~~---~-----~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         213 CGMTCA---E-----LYEKLPQGYR-----LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             cccCHH---H-----HHHHHhCCCC-----CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            643111   0     0111111110     0112223457889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.96  E-value=1.6e-28  Score=253.76  Aligned_cols=196  Identities=20%  Similarity=0.247  Sum_probs=151.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..++..++||||+++++|.+++.... .+++.++..++.|++.||+|||+.   +|+|+||||+||+++.++
T Consensus        68 ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~  143 (267)
T cd06646          68 IVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNG  143 (267)
T ss_pred             eeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCC
Confidence            7777888888999999999999999999987554 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCccccc---CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN---SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      .+||+|||++........ ......+++.|+|||.+.   ...++.++|+||||+++|||++|+.||..........   
T Consensus       144 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~---  219 (267)
T cd06646         144 DVKLADFGVAAKITATIA-KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---  219 (267)
T ss_pred             CEEECcCccceeeccccc-ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe---
Confidence            999999999986632221 122345788999999874   3457789999999999999999999985331111000   


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML  680 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  680 (702)
                           .......... ........+..+.+++.+||+.+|++||+++++++.|
T Consensus       220 -----~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         220 -----LMSKSNFQPP-KLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             -----eeecCCCCCC-CCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence                 0000000000 0011123456888999999999999999999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.96  E-value=2e-28  Score=253.35  Aligned_cols=197  Identities=23%  Similarity=0.318  Sum_probs=155.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++...+.++...++||||+++++|.+++......+++.+++.++.|++.||+|||++   +++|+||||+||+++.++
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~  143 (269)
T cd05065          67 IIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNL  143 (269)
T ss_pred             cceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCC
Confidence            78888889999999999999999999999987666789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCce-ee-cee--ccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhh
Q 038002          551 RAKISDFGLAKLLMPNQTGI-VA-GVR--GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVL  625 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~-~~-~~~--gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~  625 (702)
                      .+||+|||++.......... .. ...  .+..|+|||.+.+..++.++||||||+++||+++ |..||.....    ..
T Consensus       144 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~----~~  219 (269)
T cd05065         144 VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN----QD  219 (269)
T ss_pred             cEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH----HH
Confidence            99999999987654322211 11 111  1357999999988889999999999999999886 9999964311    11


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      ......     ...    ....+...+..+.+++.+||+.+|++||++++|+.+|+++
T Consensus       220 ~~~~i~-----~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         220 VINAIE-----QDY----RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHHHH-----cCC----cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            111111     111    0111223355688999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.95  E-value=8.6e-29  Score=261.02  Aligned_cols=196  Identities=30%  Similarity=0.385  Sum_probs=152.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                      |++++..+..++..++||||+++++|.+++....               ..+++.+++.++.||+.||+|||++   +|+
T Consensus        70 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~  146 (303)
T cd05088          70 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFI  146 (303)
T ss_pred             cceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence            6788888999999999999999999999997542               2468899999999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCC
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNF  614 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf  614 (702)
                      ||||||+||+++.++.+||+|||++........  ......+..|+|||.+.+..++.++||||||+++|||++ |..||
T Consensus       147 H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~  224 (303)
T cd05088         147 HRDLAARNILVGENYVAKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY  224 (303)
T ss_pred             ccccchheEEecCCCcEEeCccccCcccchhhh--cccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCc
Confidence            999999999999999999999999864211111  111223567999999888889999999999999999998 99999


Q ss_pred             cCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          615 EVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ......  + .     .......     .....+......+.+++.+||+.+|++||++++++++|+.+.
T Consensus       225 ~~~~~~--~-~-----~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~  281 (303)
T cd05088         225 CGMTCA--E-L-----YEKLPQG-----YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  281 (303)
T ss_pred             ccCChH--H-H-----HHHHhcC-----CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            643111  1 0     1111111     001111223457889999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=1.1e-28  Score=257.42  Aligned_cols=204  Identities=22%  Similarity=0.338  Sum_probs=155.1

Q ss_pred             eeeEEEEEecC--CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHRS--SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |+++.+.+...  ...++||||+++++|.+++......+++.++..++.|++.||+|||++   +|+||||||+||+++.
T Consensus        68 i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~  144 (284)
T cd05079          68 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVES  144 (284)
T ss_pred             eeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcC
Confidence            66676666654  678999999999999999976655689999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCc--eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCc-----
Q 038002          549 SWRAKISDFGLAKLLMPNQTG--IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTA-----  621 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-----  621 (702)
                      ++.+||+|||++..+......  ......++..|+|||.+.+..++.++||||||+++|||++++.|........     
T Consensus       145 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~  224 (284)
T cd05079         145 EHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIG  224 (284)
T ss_pred             CCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcc
Confidence            999999999999876433221  1223456778999999888889999999999999999999877653221100     


Q ss_pred             ---chhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          622 ---DEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       622 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                         .+..... .......+..     ...+...+..+.+++.+||+.||++||+++++++.|+++
T Consensus       225 ~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         225 PTHGQMTVTR-LVRVLEEGKR-----LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             cccccccHHH-HHHHHHcCcc-----CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence               0000110 0011111110     112233567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.95  E-value=1.3e-28  Score=257.95  Aligned_cols=198  Identities=28%  Similarity=0.425  Sum_probs=156.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHhhh
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-----------------------TRPLWRDRVRIALDVARGLLYLH  527 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~qi~~aL~~LH  527 (702)
                      |+++++.+..++..++||||+.+++|.+++....                       ..+++..++.++.|++.||+|||
T Consensus        65 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH  144 (290)
T cd05045          65 VIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA  144 (290)
T ss_pred             EeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH
Confidence            7888888999999999999999999999986421                       23678899999999999999999


Q ss_pred             hcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHH
Q 038002          528 DECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLE  606 (702)
Q Consensus       528 ~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e  606 (702)
                      ++   +|+||||||+||++++++.+||+|||++.......... .....++..|+|||.+.+..++.++||||||++++|
T Consensus       145 ~~---~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~e  221 (290)
T cd05045         145 EM---KLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE  221 (290)
T ss_pred             HC---CeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHH
Confidence            99   99999999999999999999999999998653332211 122345678999999888889999999999999999


Q ss_pred             hhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          607 IIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       607 llt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      |++ |..||....  ..  .+    ....... .    ....+......+.+++.+||+.+|++||+++|+++.|+++.
T Consensus       222 l~t~g~~p~~~~~--~~--~~----~~~~~~~-~----~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         222 IVTLGGNPYPGIA--PE--RL----FNLLKTG-Y----RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM  287 (290)
T ss_pred             HHhcCCCCCCCCC--HH--HH----HHHHhCC-C----CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence            998 999996431  11  11    1111111 1    11112234567889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.95  E-value=2.6e-28  Score=249.58  Aligned_cols=196  Identities=25%  Similarity=0.342  Sum_probs=155.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++.++......++||||+++++|.+++......+++..+..++.|++.+|+|||++   +++||||||+||+++.++
T Consensus        54 i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~  130 (251)
T cd05041          54 IVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENN  130 (251)
T ss_pred             eEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCC
Confidence            77888889999999999999999999999977655688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCcee-eceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIV-AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      .+||+|||++........... .....+..|+|||.+.+..++.++|+||||+++|||++ |..||......    ....
T Consensus       131 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~----~~~~  206 (251)
T cd05041         131 VLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ----QTRE  206 (251)
T ss_pred             cEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH----HHHH
Confidence            999999999986532221111 11223567999999888889999999999999999999 88888544211    1111


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                          ..... .    ....+...+..+.+++.+||+.+|++||+++||++.|+.
T Consensus       207 ----~~~~~-~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~  251 (251)
T cd05041         207 ----RIESG-Y----RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI  251 (251)
T ss_pred             ----HHhcC-C----CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence                11110 0    011122345689999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=5.6e-29  Score=279.18  Aligned_cols=222  Identities=20%  Similarity=0.195  Sum_probs=178.9

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      .+.+...+.||+|+|  |++.....  ..+|+|                              |+.+...|+++.++|+|
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV  153 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV  153 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence            345566789999999  66665544  778888                              77788889999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      ||||+||+|-.++.+.. ++++..+.-++..|+.||..||+.   |+|||||||+|||+|..|++||+|||.+..+..+.
T Consensus       154 MdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG  229 (1317)
T KOG0612|consen  154 MDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADG  229 (1317)
T ss_pred             EecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhcCCCC
Confidence            99999999999999888 899999999999999999999999   99999999999999999999999999999887777


Q ss_pred             CceeeceeccccccCcccccC-----CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcc-cccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNS-----GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAG-EFNK  641 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~  641 (702)
                      .-.....+|||.|++||+++.     +.|+..+|.||+||++|||+.|..||....       +.. .+..+... +...
T Consensus       230 ~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads-------lve-TY~KIm~hk~~l~  301 (1317)
T KOG0612|consen  230 TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS-------LVE-TYGKIMNHKESLS  301 (1317)
T ss_pred             cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH-------HHH-HHHHHhchhhhcC
Confidence            666667889999999998852     578999999999999999999999997541       111 11112111 1111


Q ss_pred             ccccccCHHHHHHHHHHHHHcccCCCCCCCC---HHHHHHH
Q 038002          642 LVEEEVDKITLERMVKTGLLCIQDEPNLRPS---MKNVILM  679 (702)
Q Consensus       642 ~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt---~~evl~~  679 (702)
                      +.   .....++...+||++.+. +|+.|..   ++++...
T Consensus       302 FP---~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H  338 (1317)
T KOG0612|consen  302 FP---DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH  338 (1317)
T ss_pred             CC---cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence            11   123367778888887666 7888988   8887664

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.95  E-value=2.1e-28  Score=253.41  Aligned_cols=197  Identities=22%  Similarity=0.269  Sum_probs=155.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++.+ +..++||||+++++|.+++......+++..+..++.|++.||+|||+.   +++|+||||+||+++.++
T Consensus        69 i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~  144 (270)
T cd05056          69 IVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPD  144 (270)
T ss_pred             hhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCC
Confidence            6777776654 567899999999999999987665689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++...............++..|+|||.+....++.++||||||+++||+++ |..||......   ...   
T Consensus       145 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~~---  218 (270)
T cd05056         145 CVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN---DVI---  218 (270)
T ss_pred             CeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH---HHH---
Confidence            99999999998764432222222334568999999888889999999999999999986 99999644211   111   


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                        .....+...     ..+...+..+.+++.+|+..+|++|||+.++++.|+++.
T Consensus       219 --~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         219 --GRIENGERL-----PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             --HHHHcCCcC-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence              111111111     112234567899999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.95  E-value=2.6e-28  Score=256.22  Aligned_cols=203  Identities=22%  Similarity=0.306  Sum_probs=153.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-----------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-----------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI  539 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-----------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dl  539 (702)
                      |+++++++..++..++||||+++++|.+++....           ..+++..++.++.|++.||+|||++   +++|+||
T Consensus        79 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dl  155 (295)
T cd05097          79 IIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDL  155 (295)
T ss_pred             cCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---Ceecccc
Confidence            7888899999999999999999999999986432           1357888999999999999999999   9999999


Q ss_pred             CCCcEEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh--CCcCCcC
Q 038002          540 KLRNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC--CRSNFEV  616 (702)
Q Consensus       540 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt--G~~Pf~~  616 (702)
                      ||+||++++++.+||+|||++......... ......++..|+|||.+.+..++.++||||||+++|||++  +..||..
T Consensus       156 kp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~  235 (295)
T cd05097         156 ATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL  235 (295)
T ss_pred             ChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence            999999999999999999999765332211 1122345678999999888889999999999999999988  5667754


Q ss_pred             CCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          617 NVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      ...  .+ .... ............  ....+...+..+.+++.+||+.||++||++++|++.|+.
T Consensus       236 ~~~--~~-~~~~-~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~  295 (295)
T cd05097         236 LSD--EQ-VIEN-TGEFFRNQGRQI--YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE  295 (295)
T ss_pred             cCh--HH-HHHH-HHHhhhhccccc--cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence            311  11 1111 111011000000  001122345689999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=2.3e-28  Score=252.19  Aligned_cols=188  Identities=21%  Similarity=0.315  Sum_probs=149.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++..+...++||||+++++|..++......+++..++.++.||++||+|||++   +|+||||||+|||++.++
T Consensus        66 iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~  142 (262)
T cd05077          66 IVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREG  142 (262)
T ss_pred             EeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCC
Confidence            88899999999999999999999999999877665789999999999999999999999   999999999999998766


Q ss_pred             c-------EEEecccceeecCCCCCceeeceeccccccCccccc-CCCCCccccccchhHhHHHhh-hCCcCCcCCCCCc
Q 038002          551 R-------AKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN-SGLITVKSDVYSFGVVLLEII-CCRSNFEVNVSTA  621 (702)
Q Consensus       551 ~-------~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~ell-tG~~Pf~~~~~~~  621 (702)
                      .       ++++|||++......     ....++..|+|||.+. +..++.++||||||+++|||+ .|..||.......
T Consensus       143 ~~~~~~~~~~l~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~  217 (262)
T cd05077         143 IDGECGPFIKLSDPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE  217 (262)
T ss_pred             ccCCCCceeEeCCCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH
Confidence            4       899999998754321     2234678899999876 467899999999999999998 5888875431110


Q ss_pred             chhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          622 DEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                       .    .    ........      ......+.+.+++.+||+.||++||++.+|++.|+
T Consensus       218 -~----~----~~~~~~~~------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         218 -K----E----RFYEGQCM------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             -H----H----HHHhcCcc------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence             0    0    00111110      11112457889999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.95  E-value=1.9e-28  Score=251.27  Aligned_cols=192  Identities=20%  Similarity=0.279  Sum_probs=154.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++...++.++..++||||+++++|.+++.... ..+++..+..++.|++.||+|||++   +|+|+||||+||+++++
T Consensus        60 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~  136 (255)
T cd08219          60 IVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQN  136 (255)
T ss_pred             cceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCC
Confidence            7788888999999999999999999999987543 3478899999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      +.++|+|||.+........ ......+++.|+|||.+.+..++.++|+||||+++|+|++|..||.....    ...   
T Consensus       137 ~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~----~~~---  208 (255)
T cd08219         137 GKVKLGDFGSARLLTSPGA-YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW----KNL---  208 (255)
T ss_pred             CcEEEcccCcceeeccccc-ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH----HHH---
Confidence            9999999999986643221 22345688899999999888899999999999999999999999964311    000   


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                       ......+...     ..+......+.+++.+||+.||++||++++++.+
T Consensus       209 -~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         209 -ILKVCQGSYK-----PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             -HHHHhcCCCC-----CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence             1111111111     1122345678899999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.95  E-value=4.2e-29  Score=270.28  Aligned_cols=222  Identities=23%  Similarity=0.346  Sum_probs=184.4

Q ss_pred             cceEEEeEE--EEEeeeeh-----hhhHhh----------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          448 KRKLLTVLA--GCLGSITF-----LCFLIA----------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       448 ~~~l~~g~~--v~~~~~~~-----~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      ++.||.|-|  ||.|.++.     ..||||                            |++|.+.--..+..+||+|||+
T Consensus       634 e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyME  713 (996)
T KOG0196|consen  634 EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYME  713 (996)
T ss_pred             EEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhh
Confidence            457899998  99999875     678888                            8888888888999999999999


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceee
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA  572 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  572 (702)
                      +|+|+.||+++..++++.+...++++|+.|++||-+.   ++|||||...|||++.+...|++|||+++.+..+.....+
T Consensus       714 NGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~yt  790 (996)
T KOG0196|consen  714 NGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYT  790 (996)
T ss_pred             CCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecccCCCcccc
Confidence            9999999999988899999999999999999999999   9999999999999999999999999999987655533333


Q ss_pred             ceec--cccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCH
Q 038002          573 GVRG--SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK  649 (702)
Q Consensus       573 ~~~g--t~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (702)
                      ..-|  ..+|.|||.+..++++.++|||||||++||.++ |++||-.. ...+  .+.. +   ...-++      ..+.
T Consensus       791 t~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm-SNQd--VIka-I---e~gyRL------PpPm  857 (996)
T KOG0196|consen  791 TLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM-SNQD--VIKA-I---EQGYRL------PPPM  857 (996)
T ss_pred             ccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc-chHH--HHHH-H---HhccCC------CCCC
Confidence            3222  458999999999999999999999999999987 99998643 1111  1111 0   011112      2345


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          650 ITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      +.+..|.+||+.|||+|-.+||++.+|+.+|+++..
T Consensus       858 DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  858 DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence            567889999999999999999999999999998543

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.95  E-value=1.3e-28  Score=260.15  Aligned_cols=199  Identities=28%  Similarity=0.375  Sum_probs=156.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                      |++++..+..++..++||||+++++|.+++....               ..+++.+++.++.|++.||+|||++   +++
T Consensus        86 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~  162 (307)
T cd05098          86 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCI  162 (307)
T ss_pred             EeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence            7788888999999999999999999999997542               2478899999999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcC
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSN  613 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~P  613 (702)
                      |+||||+||+++.++.+||+|||.+.......... .....+++.|+|||.+.+..++.++||||||+++|||++ |..|
T Consensus       163 H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p  242 (307)
T cd05098         163 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP  242 (307)
T ss_pred             cccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence            99999999999999999999999987653222111 111224568999999988889999999999999999998 8888


Q ss_pred             CcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          614 FEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       614 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      |....  .++      ..........     .+.+......+.+++.+||+.+|++||++.++++.|+.+.+
T Consensus       243 ~~~~~--~~~------~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~  301 (307)
T cd05098         243 YPGVP--VEE------LFKLLKEGHR-----MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA  301 (307)
T ss_pred             CCcCC--HHH------HHHHHHcCCC-----CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence            85431  111      1111111111     11222345688899999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=2.5e-28  Score=266.89  Aligned_cols=203  Identities=20%  Similarity=0.235  Sum_probs=153.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..++..++|||++. ++|.+++... ..+++.+++.++.||+.||+|||++   +|+||||||+|||++.++
T Consensus       148 iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~  222 (392)
T PHA03207        148 IINLIHAYRWKSTVCMVMPKYK-CDLFTYVDRS-GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPE  222 (392)
T ss_pred             ccceeeeEeeCCEEEEEehhcC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCC
Confidence            7888888999999999999996 6898888443 3789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++......... ......||+.|+|||++....++.++|||||||++|||++|+.||...........+...
T Consensus       223 ~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i  302 (392)
T PHA03207        223 NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSI  302 (392)
T ss_pred             CEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHH
Confidence            9999999999765433221 223467899999999999889999999999999999999999999754322211111111


Q ss_pred             HHHhhhcc--c---------------ccccccc--cc-----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          630 VYNCFVAG--E---------------FNKLVEE--EV-----DKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~--~---------------~~~~~~~--~~-----~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .. .....  +               ......+  ..     .......+.+++.+||+.||++||++.|++..
T Consensus       303 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        303 IR-CMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             HH-HhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence            10 00000  0               0000000  00     01124567889999999999999999999975

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.95  E-value=1e-28  Score=257.49  Aligned_cols=196  Identities=22%  Similarity=0.317  Sum_probs=154.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC---------------CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL---------------ETRPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                      |+++++.+...+..++++||+++++|.+++...               ...+++..+..++.|++.||+|||++   +|+
T Consensus        70 iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~  146 (283)
T cd05091          70 IVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVV  146 (283)
T ss_pred             cCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---Ccc
Confidence            788888999999999999999999999998532               12367888899999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcC
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSN  613 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~P  613 (702)
                      ||||||+||++++++.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |..|
T Consensus       147 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p  226 (283)
T cd05091         147 HKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP  226 (283)
T ss_pred             ccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999886533221 11223445778999999988889999999999999999998 8888


Q ss_pred             CcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          614 FEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       614 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      |.....   . .    .......+...     ..+...+..+.+++.+||+.+|++||++++|+++|++
T Consensus       227 ~~~~~~---~-~----~~~~i~~~~~~-----~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         227 YCGYSN---Q-D----VIEMIRNRQVL-----PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             CCCCCH---H-H----HHHHHHcCCcC-----CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            864311   1 1    11112222211     1223356678899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.95  E-value=3e-28  Score=252.20  Aligned_cols=197  Identities=22%  Similarity=0.360  Sum_probs=152.3

Q ss_pred             eeeEEEEEecCC------eeEEEEecCCCCCHHHHhhcC-----CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCC
Q 038002          471 ISSLLVYKHRSS------KKLLVYEFMSKGSLADLLFNL-----ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI  539 (702)
Q Consensus       471 i~~l~~~~~~~~------~~~lV~e~~~~gsL~~~l~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dl  539 (702)
                      |+++++.....+      ..++||||+++++|..++...     ...+++..+..++.|++.||+|||++   +|+|+||
T Consensus        63 iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl  139 (273)
T cd05035          63 VMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDL  139 (273)
T ss_pred             eeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---Ceecccc
Confidence            666766554444      489999999999999998543     23578899999999999999999999   9999999


Q ss_pred             CCCcEEEeCCCcEEEecccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCC
Q 038002          540 KLRNILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVN  617 (702)
Q Consensus       540 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~  617 (702)
                      ||+||++++++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus       140 kp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~  219 (273)
T cd05035         140 AARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGV  219 (273)
T ss_pred             chheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999998764333211 112234678999999988889999999999999999999 88988643


Q ss_pred             CCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          618 VSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      ..  .  ..    ......+...     ..+......+.+++.+||+.||++||++.|+++.|+++
T Consensus       220 ~~--~--~~----~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         220 EN--H--EI----YDYLRHGNRL-----KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CH--H--HH----HHHHHcCCCC-----CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            11  1  11    1111111111     12234466889999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.95  E-value=2.7e-28  Score=252.36  Aligned_cols=199  Identities=28%  Similarity=0.335  Sum_probs=148.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCC----CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLET----RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI  546 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  546 (702)
                      |+++++.+......++||||+++|+|.+++.....    ..++..+..++.||+.||+|||++   +|+||||||+||++
T Consensus        57 ii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill  133 (269)
T cd05042          57 VLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQL  133 (269)
T ss_pred             cceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEe
Confidence            78888899999999999999999999999976532    245778889999999999999999   99999999999999


Q ss_pred             eCCCcEEEecccceeecCCCCCc-eeeceeccccccCccccc-------CCCCCccccccchhHhHHHhhh-CCcCCcCC
Q 038002          547 DDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQN-------SGLITVKSDVYSFGVVLLEIIC-CRSNFEVN  617 (702)
Q Consensus       547 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~  617 (702)
                      +.++.+||+|||++......... ......++..|+|||++.       ...++.++||||||+++|||++ |..||...
T Consensus       134 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~  213 (269)
T cd05042         134 TADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDL  213 (269)
T ss_pred             cCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcC
Confidence            99999999999998754322211 112234567799999764       2456789999999999999999 78888543


Q ss_pred             CCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          618 VSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                      ..   ...+.    .. ..........+..+......+.+++..|+ .||++||++++|+++|.
T Consensus       214 ~~---~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         214 SD---EQVLK----QV-VREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             CH---HHHHH----HH-hhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            11   11111    11 11111112222233345566777778888 49999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.95  E-value=5.1e-28  Score=253.10  Aligned_cols=199  Identities=25%  Similarity=0.457  Sum_probs=155.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKL  541 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp  541 (702)
                      |++++..+...+..++||||+++|+|.+++....         ...++..+..++.|++.||+|||++   +|+||||||
T Consensus        71 i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp  147 (288)
T cd05061          71 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAA  147 (288)
T ss_pred             eeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCCh
Confidence            7888888889999999999999999999997532         2346778889999999999999999   999999999


Q ss_pred             CcEEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCC
Q 038002          542 RNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVS  619 (702)
Q Consensus       542 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~  619 (702)
                      +||++++++.++|+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus       148 ~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~  227 (288)
T cd05061         148 RNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN  227 (288)
T ss_pred             heEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999999998765332211 1112234678999999988889999999999999999998 7888864311


Q ss_pred             CcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          620 TADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                        ++  .    ......+...     ..+......+.+++.+||+.||++|||+.++++.|++...
T Consensus       228 --~~--~----~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~  280 (288)
T cd05061         228 --EQ--V----LKFVMDGGYL-----DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH  280 (288)
T ss_pred             --HH--H----HHHHHcCCCC-----CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC
Confidence              11  1    1111111111     1112234689999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.95  E-value=1.9e-28  Score=252.28  Aligned_cols=198  Identities=25%  Similarity=0.433  Sum_probs=151.2

Q ss_pred             eeeEEEEE-ecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYK-HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~-~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++.+ ..+...++||||+++++|.+++.......++..+..++.|+++||+|||+.   +++|+||||+||+++++
T Consensus        58 iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~  134 (262)
T cd05058          58 VLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDES  134 (262)
T ss_pred             cceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCC
Confidence            66677654 456678999999999999999987655678888899999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCc---eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhC-CcCCcCCCCCcchhh
Q 038002          550 WRAKISDFGLAKLLMPNQTG---IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICC-RSNFEVNVSTADEVL  625 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG-~~Pf~~~~~~~~~~~  625 (702)
                      +.+||+|||++.........   ......++..|+|||.+.+..++.++||||||+++|||++| ..||... .   ...
T Consensus       135 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~-~---~~~  210 (262)
T cd05058         135 FTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-D---SFD  210 (262)
T ss_pred             CcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC-C---HHH
Confidence            99999999999765332211   11223456789999999888899999999999999999995 5555432 1   111


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ....    ...+..     ...+...+..+.+++.+||+.+|++||++.+|+++|+++.
T Consensus       211 ~~~~----~~~~~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         211 ITVY----LLQGRR-----LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             HHHH----HhcCCC-----CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence            1111    111110     0111223467889999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.95  E-value=4.4e-28  Score=254.62  Aligned_cols=203  Identities=24%  Similarity=0.311  Sum_probs=153.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC----------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE----------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIK  540 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlk  540 (702)
                      |++++.++..++..++||||+++++|.+++....          ..+++.++..++.|++.||+|||+.   +++|+|||
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlk  157 (296)
T cd05095          81 IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLA  157 (296)
T ss_pred             cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCC
Confidence            7888899999999999999999999999987542          1356788999999999999999999   99999999


Q ss_pred             CCcEEEeCCCcEEEecccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh--CCcCCcCC
Q 038002          541 LRNILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC--CRSNFEVN  617 (702)
Q Consensus       541 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt--G~~Pf~~~  617 (702)
                      |+||+++.++.++|+|||++..+....... .....++..|++||......++.++||||||+++|||++  |..||...
T Consensus       158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~  237 (296)
T cd05095         158 TRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL  237 (296)
T ss_pred             hheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence            999999999999999999998653322111 122334678999998888889999999999999999998  67888543


Q ss_pred             CCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          618 VSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      ...  +..  ................  ..+...+..+.+++.+||+.||++||++++|++.|+.
T Consensus       238 ~~~--~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         238 SDE--QVI--ENTGEFFRDQGRQVYL--PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             ChH--HHH--HHHHHHHhhccccccC--CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            111  111  0011101110000001  1122344788899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.95  E-value=2.9e-28  Score=256.15  Aligned_cols=192  Identities=23%  Similarity=0.302  Sum_probs=153.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..+.+.++||||+++++|.+++...  .+++.++..++.|++.||+|||+.   +|+|+||||+||+++.++
T Consensus        79 v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~  153 (296)
T cd06654          79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDG  153 (296)
T ss_pred             EeeEEEEEEeCCEEEEeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCC
Confidence            778888888899999999999999999998643  578899999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++........ ......+++.|+|||.+.+..++.++||||||+++|+|++|+.||......  ..     .
T Consensus       154 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~--~~-----~  225 (296)
T cd06654         154 SVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--RA-----L  225 (296)
T ss_pred             CEEECccccchhcccccc-ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH--Hh-----H
Confidence            999999999876533221 122345788999999998888899999999999999999999999643211  10     1


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ........ ...   ..+......+.+++.+||+.||++||+++++++.
T Consensus       226 ~~~~~~~~-~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         226 YLIATNGT-PEL---QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             HHHhcCCC-CCC---CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence            11111110 000   1123445678899999999999999999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.95  E-value=2.2e-28  Score=255.20  Aligned_cols=205  Identities=25%  Similarity=0.312  Sum_probs=151.9

Q ss_pred             eeeEEEEE--ecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYK--HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~--~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |+++.+++  .+....++||||+++++|.+++......+++..+..++.|++.||+|||++   +|+|+||||+||+++.
T Consensus        67 iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~  143 (284)
T cd05081          67 IVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVES  143 (284)
T ss_pred             eeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECC
Confidence            66666554  334578999999999999999977655689999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCcee--eceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcch---
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIV--AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE---  623 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~---  623 (702)
                      ++.+||+|||++...........  ....++..|+|||.+.+..++.++||||||+++|||++|..|+.........   
T Consensus       144 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~  223 (284)
T cd05081         144 ENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMG  223 (284)
T ss_pred             CCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcc
Confidence            99999999999987643322111  1122344699999998888999999999999999999988775432110000   


Q ss_pred             -----hhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          624 -----VLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       624 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                           ...............     ...........+.+++.+||+.+|++|||++||+++|+.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         224 NDKQGQMIVYHLIELLKNNG-----RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             cccccccchHHHHHHHhcCC-----cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence                 000000000011110     0011223456799999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.3e-28  Score=248.69  Aligned_cols=205  Identities=22%  Similarity=0.247  Sum_probs=166.2

Q ss_pred             cceEEEeEE--EEEeeeeh--hhhHhh-------------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          448 KRKLLTVLA--GCLGSITF--LCFLIA-------------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       448 ~~~l~~g~~--v~~~~~~~--~~~avk-------------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      ...||+|+|  |.++..+.  +.+|||                               ++++...|++-+++|+||||+.
T Consensus       354 l~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvn  433 (683)
T KOG0696|consen  354 LMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVN  433 (683)
T ss_pred             EEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEec
Confidence            357888888  77776655  677777                               3444556777999999999999


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceee
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA  572 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  572 (702)
                      ||+|.-.|++.+ ++.+..+.-++.+|+-||-+||++   |||.||||.+||++|.+|++||+|||+++.--- ......
T Consensus       434 GGDLMyhiQQ~G-kFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~-~~~TTk  508 (683)
T KOG0696|consen  434 GGDLMYHIQQVG-KFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF-DGVTTK  508 (683)
T ss_pred             CchhhhHHHHhc-ccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccccc-CCccee
Confidence            999999998776 788889999999999999999999   999999999999999999999999999985322 223356


Q ss_pred             ceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHH
Q 038002          573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL  652 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  652 (702)
                      +++|||.|+|||++..++|+.++|.||+||+||||+.|+.||+...   ++..+..     +.+..      -.++...+
T Consensus       509 TFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD---E~elF~a-----I~ehn------vsyPKslS  574 (683)
T KOG0696|consen  509 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED---EDELFQA-----IMEHN------VSYPKSLS  574 (683)
T ss_pred             eecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC---HHHHHHH-----HHHcc------CcCccccc
Confidence            7899999999999999999999999999999999999999998652   1222211     11111      13456667


Q ss_pred             HHHHHHHHHcccCCCCCCC
Q 038002          653 ERMVKTGLLCIQDEPNLRP  671 (702)
Q Consensus       653 ~~l~~li~~cL~~dP~~RP  671 (702)
                      .+...+++..|...|.+|.
T Consensus       575 kEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  575 KEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             HHHHHHHHHHhhcCCcccc
Confidence            7888888889999999993

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.95  E-value=4.8e-28  Score=253.77  Aligned_cols=193  Identities=22%  Similarity=0.251  Sum_probs=151.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++.+.+..++..++||||+++++|..++.+....+++..+..++.|++.+|+|||++   +++|+||||+||+++.++
T Consensus        71 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~  147 (292)
T cd06644          71 IVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDG  147 (292)
T ss_pred             EeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCC
Confidence            78888888889999999999999999998876665789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCccccc-----CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN-----SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                      .+||+|||++....... .......+++.|+|||.+.     ...++.++|+||||+++|||++|+.||......  . .
T Consensus       148 ~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~-~  223 (292)
T cd06644         148 DIKLADFGVSAKNVKTL-QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--R-V  223 (292)
T ss_pred             CEEEccCccceeccccc-cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH--H-H
Confidence            99999999987543221 1223455788999999874     345688999999999999999999999643211  0 0


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .     ...........   ..+......+.+++.+||+.||++||+++++++
T Consensus       224 ~-----~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         224 L-----LKIAKSEPPTL---SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             H-----HHHhcCCCccC---CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            0     11111111111   112234567889999999999999999999986

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.95  E-value=5.7e-28  Score=250.21  Aligned_cols=197  Identities=23%  Similarity=0.304  Sum_probs=150.1

Q ss_pred             eeeEEEEEec------CCeeEEEEecCCCCCHHHHhhcC-----CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCC
Q 038002          471 ISSLLVYKHR------SSKKLLVYEFMSKGSLADLLFNL-----ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI  539 (702)
Q Consensus       471 i~~l~~~~~~------~~~~~lV~e~~~~gsL~~~l~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dl  539 (702)
                      |++++.+...      ....++||||+++|+|.+++...     ...+++..+..++.|++.||+|||++   +|+||||
T Consensus        62 iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  138 (272)
T cd05075          62 VMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDL  138 (272)
T ss_pred             cceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---Ceecccc
Confidence            6666654321      23579999999999999987432     23478999999999999999999999   9999999


Q ss_pred             CCCcEEEeCCCcEEEecccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCC
Q 038002          540 KLRNILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVN  617 (702)
Q Consensus       540 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~  617 (702)
                      ||+||++++++.+||+|||++.......... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus       139 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  218 (272)
T cd05075         139 AARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV  218 (272)
T ss_pred             chhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence            9999999999999999999998764332211 112335678999999988899999999999999999999 88898643


Q ss_pred             CCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          618 VSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      ..    ..    .......+...     ..+......+.+++.+||+.||++|||+++|++.|+.+
T Consensus       219 ~~----~~----~~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         219 EN----SE----IYDYLRQGNRL-----KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CH----HH----HHHHHHcCCCC-----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            11    11    11111222111     11223456789999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.95  E-value=3.1e-28  Score=258.34  Aligned_cols=143  Identities=23%  Similarity=0.325  Sum_probs=116.5

Q ss_pred             eeeEEEEE--ecCCeeEEEEecCCCCCHHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCC
Q 038002          471 ISSLLVYK--HRSSKKLLVYEFMSKGSLADLLFNL--------ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIK  540 (702)
Q Consensus       471 i~~l~~~~--~~~~~~~lV~e~~~~gsL~~~l~~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlk  540 (702)
                      |++++..+  +.+...++||||+. ++|.+++...        ...+++..+..++.||+.||+|||++   +|+|||||
T Consensus        60 iv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlk  135 (317)
T cd07868          60 VISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLK  135 (317)
T ss_pred             CcceeeeEecCCCcEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCC
Confidence            66676665  34667899999996 4888887532        12478889999999999999999999   99999999


Q ss_pred             CCcEEE----eCCCcEEEecccceeecCCCCC--ceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcC
Q 038002          541 LRNILI----DDSWRAKISDFGLAKLLMPNQT--GIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSN  613 (702)
Q Consensus       541 p~NIll----~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~P  613 (702)
                      |+|||+    +.++.+||+|||++........  .......+|+.|+|||++.+ ..++.++||||+||++|||++|+.|
T Consensus       136 p~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~  215 (317)
T cd07868         136 PANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI  215 (317)
T ss_pred             HHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence            999999    4567899999999987643321  12234678999999998876 4689999999999999999999999


Q ss_pred             CcCC
Q 038002          614 FEVN  617 (702)
Q Consensus       614 f~~~  617 (702)
                      |...
T Consensus       216 f~~~  219 (317)
T cd07868         216 FHCR  219 (317)
T ss_pred             ccCC
Confidence            9654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.95  E-value=4.6e-28  Score=250.59  Aligned_cols=195  Identities=22%  Similarity=0.347  Sum_probs=156.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFN---LETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILI  546 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll  546 (702)
                      |++++.++..++..++||||+++++|.+++..   ....+++..++.++.|++.+|.|||+ .   +++|+||+|+||++
T Consensus        71 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~  147 (269)
T cd08528          71 IVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIML  147 (269)
T ss_pred             eeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEE
Confidence            77888889999999999999999999998753   33468899999999999999999996 5   89999999999999


Q ss_pred             eCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          547 DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       547 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                      +.++.+||+|||.+.......  ......++..|+|||.+.+..++.++|+||||+++|||++|+.||.....    ...
T Consensus       148 ~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~----~~~  221 (269)
T cd08528         148 GEDDKVTITDFGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM----LSL  221 (269)
T ss_pred             CCCCcEEEecccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH----HHH
Confidence            999999999999998764432  23445688899999999888899999999999999999999999964311    111


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      .    .....+.....    ........+.+++.+||+.||++||++.|+.++|+.
T Consensus       222 ~----~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~  269 (269)
T cd08528         222 A----TKIVEAVYEPL----PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD  269 (269)
T ss_pred             H----HHHhhccCCcC----CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence            1    11111111111    111345678899999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.95  E-value=4.1e-28  Score=249.11  Aligned_cols=187  Identities=22%  Similarity=0.328  Sum_probs=148.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+.. +..++||||+++|+|.+++......+++..+..++.||+.||+|||++   +|+|+||||+||+++.++
T Consensus        63 i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~  138 (259)
T cd05037          63 LVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYG  138 (259)
T ss_pred             hhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCc
Confidence            6777777766 778999999999999999987665789999999999999999999999   999999999999999888


Q ss_pred             -------cEEEecccceeecCCCCCceeeceeccccccCcccccCC--CCCccccccchhHhHHHhhh-CCcCCcCCCCC
Q 038002          551 -------RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG--LITVKSDVYSFGVVLLEIIC-CRSNFEVNVST  620 (702)
Q Consensus       551 -------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~  620 (702)
                             .+||+|||++.....     .....++..|+|||++...  .++.++||||||+++|||++ |..||.... .
T Consensus       139 ~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~-~  212 (259)
T cd05037         139 LNEGYVPFIKLSDPGIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS-S  212 (259)
T ss_pred             cccCCceeEEeCCCCccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC-c
Confidence                   799999999986533     1223456789999998766  78999999999999999999 577775442 1


Q ss_pred             cchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          621 ADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                      ....  .  .+.   ....       .+......+.+++.+||+.+|.+||++.++++.|+
T Consensus       213 ~~~~--~--~~~---~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         213 SEKE--R--FYQ---DQHR-------LPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             hhHH--H--HHh---cCCC-------CCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            1100  0  000   0000       00111268889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.95  E-value=2.6e-28  Score=256.97  Aligned_cols=202  Identities=19%  Similarity=0.228  Sum_probs=151.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..++..++||||++ ++|.+++......+++..+..++.||++||+|||+.   +|+|+||||+||+++.++
T Consensus        66 I~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~  141 (301)
T cd07873          66 IVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERG  141 (301)
T ss_pred             cceEEEEEecCCeEEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCC
Confidence            7888899999999999999997 599999887666788999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++........ ......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||...... +.......
T Consensus       142 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~-~~~~~~~~  219 (301)
T cd07873         142 ELKLADFGLARAKSIPTK-TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE-EQLHFIFR  219 (301)
T ss_pred             cEEECcCcchhccCCCCC-cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence            999999999876432221 1223456889999998765 45788999999999999999999999754211 11100000


Q ss_pred             --------HHHhhhcc-cc-----ccccc---cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 --------VYNCFVAG-EF-----NKLVE---EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 --------~~~~~~~~-~~-----~~~~~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                              .+...... ..     .....   ..........+.+++.+||+.||.+|||++|+++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         220 ILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             HcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence                    00000000 00     00000   0111234557889999999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.95  E-value=3e-28  Score=252.27  Aligned_cols=192  Identities=23%  Similarity=0.278  Sum_probs=147.4

Q ss_pred             eeeEEEEEec------CCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCc
Q 038002          471 ISSLLVYKHR------SSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN  543 (702)
Q Consensus       471 i~~l~~~~~~------~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~N  543 (702)
                      |+++.+.+..      +...++||||+++++|.+++.... ..+++..+..++.|++.||+|||++   +|+|+||||+|
T Consensus        65 i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~n  141 (272)
T cd06637          65 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQN  141 (272)
T ss_pred             eeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHH
Confidence            6666665543      357899999999999999998643 3588999999999999999999999   99999999999


Q ss_pred             EEEeCCCcEEEecccceeecCCCCCceeeceeccccccCccccc-----CCCCCccccccchhHhHHHhhhCCcCCcCCC
Q 038002          544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN-----SGLITVKSDVYSFGVVLLEIICCRSNFEVNV  618 (702)
Q Consensus       544 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~  618 (702)
                      |++++++.++|+|||++....... .......|+..|+|||++.     ...++.++|||||||++|||++|..||....
T Consensus       142 ili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~  220 (272)
T cd06637         142 VLLTENAEVKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH  220 (272)
T ss_pred             EEECCCCCEEEccCCCceeccccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence            999999999999999998653322 1233456889999999875     3457889999999999999999999996431


Q ss_pred             CCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          619 STADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .....        ...........    .....+..+.+++.+||+.||.+|||++++++
T Consensus       221 ~~~~~--------~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         221 PMRAL--------FLIPRNPAPRL----KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             HHHHH--------HHHhcCCCCCC----CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            11000        00011111111    11233457889999999999999999999975

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.95  E-value=3.6e-28  Score=251.09  Aligned_cols=195  Identities=20%  Similarity=0.248  Sum_probs=151.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..++..++||||+++++|.+++...+ .+++.++..++.|++.||+|||+.   +|+|+||||+||+++.++
T Consensus        68 ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~  143 (267)
T cd06645          68 IVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNG  143 (267)
T ss_pred             eeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCC
Confidence            7788888889999999999999999999987654 789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCccccc---CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN---SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      .+||+|||++....... .......|+..|+|||.+.   ...++.++|+|||||++|+|++|..||....... .  ..
T Consensus       144 ~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~-~--~~  219 (267)
T cd06645         144 HVKLADFGVSAQITATI-AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-A--LF  219 (267)
T ss_pred             CEEECcceeeeEccCcc-cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh-h--HH
Confidence            99999999987654322 1223456899999999874   4568899999999999999999999985432111 0  00


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .    .............  .......+.+++.+||+.+|++||++++|++.
T Consensus       220 ~----~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         220 L----MTKSNFQPPKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             h----hhccCCCCCcccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            0    0000000000000  11234568899999999999999999998853

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=6.2e-28  Score=248.23  Aligned_cols=195  Identities=22%  Similarity=0.261  Sum_probs=154.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..++..+++|||+++++|.+++......+++.++..++.|++.||+|||++   +|+|+||+|+||++++++
T Consensus        62 i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~  138 (262)
T cd06613          62 IVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDG  138 (262)
T ss_pred             hhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCC
Confidence            78888889999999999999999999999987655789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCC---CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG---LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      .+||+|||++....... .......++..|+|||.+.+.   .++.++|+||||+++|||++|..||....... .  ..
T Consensus       139 ~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~-~--~~  214 (262)
T cd06613         139 DVKLADFGVSAQLTATI-AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR-A--LF  214 (262)
T ss_pred             CEEECccccchhhhhhh-hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-H--HH
Confidence            99999999987654322 122335678899999988766   78899999999999999999999996432111 0  00


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .     ......... ........+..+.+++.+||+.+|.+|||+++|+.
T Consensus       215 ~-----~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         215 L-----ISKSNFPPP-KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             H-----HHhccCCCc-cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0     001100000 00123345677999999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.95  E-value=4.7e-28  Score=253.06  Aligned_cols=194  Identities=25%  Similarity=0.291  Sum_probs=152.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+.+...+..++..++||||+++++|.+++.... ..+++..+..++.|++.||.|||+.   +|+||||||+||+++++
T Consensus        62 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~  138 (285)
T cd05632          62 VVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDY  138 (285)
T ss_pred             ceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCC
Confidence            6677788888999999999999999999886543 3589999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      +.+||+|||++........  .....|+..|+|||.+.+..++.++|+||||+++|||++|..||........   . ..
T Consensus       139 ~~~kl~Dfg~~~~~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~---~-~~  212 (285)
T cd05632         139 GHIRISDLGLAVKIPEGES--IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK---R-EE  212 (285)
T ss_pred             CCEEEecCCcceecCCCCc--ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH---H-HH
Confidence            9999999999876532221  2344689999999999888899999999999999999999999974421110   0 11


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPS-----MKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~~  679 (702)
                      .........      ..........+.+++.+||+.||++||+     ++++++.
T Consensus       213 ~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         213 VDRRVLETE------EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             HHHhhhccc------cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence            111111111      1122234556788999999999999999     6677663

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.95  E-value=2.4e-28  Score=263.61  Aligned_cols=200  Identities=23%  Similarity=0.220  Sum_probs=145.0

Q ss_pred             eeeEEEEEec------CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKHR------SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~~------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |++++..+..      ....++||||+++ +|.+.+..   .+++..+..++.|++.||+|||++   +|+||||||+||
T Consensus        78 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Ni  150 (355)
T cd07874          78 IISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNI  150 (355)
T ss_pred             hhceeeeeeccccccccceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHE
Confidence            5566655543      2467999999975 67776643   478888999999999999999999   999999999999


Q ss_pred             EEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       545 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      +++.++.+||+|||+++......  ......+|+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus       151 ll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  228 (355)
T cd07874         151 VVKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN  228 (355)
T ss_pred             EECCCCCEEEeeCcccccCCCcc--ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            99999999999999998653221  2234568999999999998899999999999999999999999996542111000


Q ss_pred             hhHHH--------------HHHhhhc--cc-----ccccc-------ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 038002          625 LLSTW--------------VYNCFVA--GE-----FNKLV-------EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNV  676 (702)
Q Consensus       625 ~~~~~--------------~~~~~~~--~~-----~~~~~-------~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~ev  676 (702)
                      .....              ....+..  ..     +....       +..........+.+++.+||+.||++|||++|+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~el  308 (355)
T cd07874         229 KVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEA  308 (355)
T ss_pred             HHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHH
Confidence            00000              0000000  00     00000       001122235678899999999999999999999


Q ss_pred             HHH
Q 038002          677 ILM  679 (702)
Q Consensus       677 l~~  679 (702)
                      ++.
T Consensus       309 l~h  311 (355)
T cd07874         309 LQH  311 (355)
T ss_pred             hcC
Confidence            985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.95  E-value=2.6e-28  Score=266.09  Aligned_cols=199  Identities=25%  Similarity=0.359  Sum_probs=155.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC----------------------------------------------
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE----------------------------------------------  504 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------------------------------------------  504 (702)
                      |+++++.+..++..++||||+++|+|.+++...+                                              
T Consensus       103 iv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (401)
T cd05107         103 IVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMS  182 (401)
T ss_pred             eEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccC
Confidence            7888888999999999999999999999996432                                              


Q ss_pred             ---------------------------------------------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCC
Q 038002          505 ---------------------------------------------------TRPLWRDRVRIALDVARGLLYLHDECEVQ  533 (702)
Q Consensus       505 ---------------------------------------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~  533 (702)
                                                                         ..+++..+..++.||+.||+|||+.   +
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~  259 (401)
T cd05107         183 KDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---N  259 (401)
T ss_pred             CccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---C
Confidence                                                               1245677888999999999999999   9


Q ss_pred             eEecCCCCCcEEEeCCCcEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CC
Q 038002          534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CR  611 (702)
Q Consensus       534 ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~  611 (702)
                      |+||||||+|||+++++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |.
T Consensus       260 ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~  339 (401)
T cd05107         260 CVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGG  339 (401)
T ss_pred             cCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999986533221 11223346788999999988889999999999999999998 88


Q ss_pred             cCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          612 SNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       612 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .||......  +.     .......+.     ....+......+.+++.+||+.+|++||+++||++.|+.+.
T Consensus       340 ~P~~~~~~~--~~-----~~~~~~~~~-----~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         340 TPYPELPMN--EQ-----FYNAIKRGY-----RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             CCCCCCCch--HH-----HHHHHHcCC-----CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            998643111  11     111111111     01112234568899999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.95  E-value=3.5e-28  Score=257.68  Aligned_cols=198  Identities=27%  Similarity=0.376  Sum_probs=155.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                      |+++++.+..++..++||||+++|+|.+++....               ..+++.++..++.||+.||+|||++   ||+
T Consensus        80 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~  156 (314)
T cd05099          80 IINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCI  156 (314)
T ss_pred             eeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Cee
Confidence            7788888888999999999999999999996532               2478889999999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcC
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSN  613 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~P  613 (702)
                      |+||||+||+++.++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..|
T Consensus       157 H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p  236 (314)
T cd05099         157 HRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSP  236 (314)
T ss_pred             eccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999998654322111 111224467999999988889999999999999999999 8889


Q ss_pred             CcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          614 FEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       614 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      |.....  .+      .......+...     ..+......+.+++.+||+.+|++||++.++++.|+++.
T Consensus       237 ~~~~~~--~~------~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~  294 (314)
T cd05099         237 YPGIPV--EE------LFKLLREGHRM-----DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL  294 (314)
T ss_pred             CCCCCH--HH------HHHHHHcCCCC-----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            854311  11      11111111111     112233557889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.95  E-value=5e-28  Score=251.13  Aligned_cols=197  Identities=23%  Similarity=0.309  Sum_probs=155.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCC--------CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLET--------RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR  542 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~  542 (702)
                      |++++.++.+.+..++||||+++++|.+++.....        .+++..+..++.|++.||+|||+.   +|+|+||||+
T Consensus        70 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~  146 (275)
T cd05046          70 VVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAAR  146 (275)
T ss_pred             eeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccc
Confidence            77888899999999999999999999999975441        478999999999999999999999   9999999999


Q ss_pred             cEEEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCc
Q 038002          543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTA  621 (702)
Q Consensus       543 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~  621 (702)
                      ||+++.++.++|+|||++...............++..|+|||.+.+...+.++||||||+++|+|++ |..||.....  
T Consensus       147 Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~--  224 (275)
T cd05046         147 NCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD--  224 (275)
T ss_pred             eEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch--
Confidence            9999999999999999987543332222333456778999999888888999999999999999998 7888853311  


Q ss_pred             chhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          622 DEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                       ..     .......+.....    .....+..+.+++.+||+.+|++||++.|++++|++
T Consensus       225 -~~-----~~~~~~~~~~~~~----~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~  275 (275)
T cd05046         225 -EE-----VLNRLQAGKLELP----VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE  275 (275)
T ss_pred             -HH-----HHHHHHcCCcCCC----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence             11     1111111111111    112345678899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.95  E-value=8.1e-28  Score=248.63  Aligned_cols=196  Identities=26%  Similarity=0.358  Sum_probs=153.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC------CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL------ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |+++++++...+..++||||+++++|.+++...      ...+++.++..++.|++.||+|||+.   +++|+||||+||
T Consensus        61 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~ni  137 (269)
T cd05044          61 IVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNC  137 (269)
T ss_pred             eeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheE
Confidence            778888888999999999999999999999753      12377899999999999999999999   999999999999


Q ss_pred             EEeCCC-----cEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCC
Q 038002          545 LIDDSW-----RAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVN  617 (702)
Q Consensus       545 ll~~~~-----~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~  617 (702)
                      +++.++     .++|+|||++......... ......++..|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus       138 l~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~  217 (269)
T cd05044         138 LVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPAL  217 (269)
T ss_pred             EEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCccc
Confidence            999877     8999999999765332211 1122345678999999998899999999999999999998 99999643


Q ss_pred             CCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          618 VSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      ..    ......    ...+..     .......+..+.+++.+||+.+|++||++++|+++|++
T Consensus       218 ~~----~~~~~~----~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         218 NN----QEVLQH----VTAGGR-----LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             CH----HHHHHH----HhcCCc-----cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            11    111111    111110     01223346778899999999999999999999999864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.95  E-value=3.7e-28  Score=262.53  Aligned_cols=228  Identities=21%  Similarity=0.219  Sum_probs=160.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecC------Ce
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRS------SK  483 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~------~~  483 (702)
                      +.+...+.||+|++  ||++....  ..+|+|                             |++++..+...      ..
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  100 (359)
T cd07876          21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD  100 (359)
T ss_pred             hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence            34455667777776  66665432  445554                             66666666433      35


Q ss_pred             eEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          484 KLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                      .|+||||+++ +|.+.+..   .+++..+..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++...
T Consensus       101 ~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~  173 (359)
T cd07876         101 VYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  173 (359)
T ss_pred             eEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence            7999999975 66666632   478888999999999999999999   9999999999999999999999999999754


Q ss_pred             CCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH-----------HH---
Q 038002          564 MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS-----------TW---  629 (702)
Q Consensus       564 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~-----------~~---  629 (702)
                      ....  ......+|+.|+|||.+.+..++.++||||||+++|+|++|+.||.............           ..   
T Consensus       174 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (359)
T cd07876         174 CTNF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQP  251 (359)
T ss_pred             ccCc--cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence            3222  2234568999999999998899999999999999999999999997542111000000           00   


Q ss_pred             HHHhhh--cccc-----ccccc-------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          630 VYNCFV--AGEF-----NKLVE-------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       630 ~~~~~~--~~~~-----~~~~~-------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ......  ....     .....       ..........+.+++.+||+.||++|||++|+++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         252 TVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             HHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence            000000  0000     00000       01112234678899999999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.95  E-value=4.7e-28  Score=252.46  Aligned_cols=195  Identities=21%  Similarity=0.226  Sum_probs=152.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..++..++||||+++++|..++......+++..+..++.|+++||+|||+.   +|+|+||||+||+++.++
T Consensus        64 ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~  140 (282)
T cd06643          64 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDG  140 (282)
T ss_pred             eeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCC
Confidence            78888888899999999999999999998876555789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCccccc-----CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN-----SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                      .+||+|||++....... .......++..|+|||.+.     +..++.++|||||||++|||++|+.||.....   ...
T Consensus       141 ~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~  216 (282)
T cd06643         141 DIKLADFGVSAKNTRTI-QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP---MRV  216 (282)
T ss_pred             CEEEccccccccccccc-cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH---HHH
Confidence            99999999987653222 1223356889999999873     44577899999999999999999999964311   111


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML  680 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  680 (702)
                      ...     .........   ..+......+.+++.+||+.||++||+++++++.-
T Consensus       217 ~~~-----~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  263 (282)
T cd06643         217 LLK-----IAKSEPPTL---AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP  263 (282)
T ss_pred             HHH-----HhhcCCCCC---CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence            111     011110011   11223456789999999999999999999988543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.95  E-value=9e-28  Score=292.31  Aligned_cols=227  Identities=22%  Similarity=0.428  Sum_probs=176.2

Q ss_pred             ccceEEEeEE--EEEeeeeh--hhhHhh-----------------------eeeEEEEEecCCeeEEEEecCCCCCHHHH
Q 038002          447 DKRKLLTVLA--GCLGSITF--LCFLIA-----------------------ISSLLVYKHRSSKKLLVYEFMSKGSLADL  499 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------i~~l~~~~~~~~~~~lV~e~~~~gsL~~~  499 (702)
                      ..+.+|+|++  ||+|....  ..||||                       |+++++++.+++..++||||+++|+|.++
T Consensus       694 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~  773 (968)
T PLN00113        694 EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEV  773 (968)
T ss_pred             cccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHH
Confidence            3467899988  99887542  566665                       88899999999999999999999999999


Q ss_pred             hhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeeceecccc
Q 038002          500 LFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG  579 (702)
Q Consensus       500 l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~  579 (702)
                      ++    .+++.++..++.|+++||+|||.++..+|+||||||+||+++.++..++. |+.+......     ....+++.
T Consensus       774 l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-----~~~~~t~~  843 (968)
T PLN00113        774 LR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-----TKCFISSA  843 (968)
T ss_pred             Hh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC-----CCcccccc
Confidence            95    47899999999999999999996555599999999999999999888876 5554432211     12357899


Q ss_pred             ccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccc------ccCHHHHH
Q 038002          580 YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE------EVDKITLE  653 (702)
Q Consensus       580 y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  653 (702)
                      |+|||++.+..++.++|||||||++|||++|+.||+......  ....+|.............+++      ..+.....
T Consensus       844 y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  921 (968)
T PLN00113        844 YVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVH--GSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIV  921 (968)
T ss_pred             ccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCC--CcHHHHHHHhcCccchhheeCccccCCCCccHHHHH
Confidence            999999999999999999999999999999999996432211  1222333222222222222222      23456677


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          654 RMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       654 ~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ++.+++.+||+.||++||+|+|++++|+++.+
T Consensus       922 ~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        922 EVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             HHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            88999999999999999999999999998754

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.95  E-value=3.8e-28  Score=259.01  Aligned_cols=197  Identities=20%  Similarity=0.226  Sum_probs=149.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++.++..++..++||||+++|+|.+++... ...+++..+..++.|++.||+|||++   +|+||||||+||+++.+
T Consensus        61 iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~  137 (327)
T cd08227          61 IVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVD  137 (327)
T ss_pred             eeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecC
Confidence            888889999999999999999999999999754 33588999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCC------ceeeceeccccccCcccccC--CCCCccccccchhHhHHHhhhCCcCCcCCCCCc
Q 038002          550 WRAKISDFGLAKLLMPNQT------GIVAGVRGSRGYMAPEWQNS--GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTA  621 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~  621 (702)
                      +.+++.||+..........      .......++..|+|||++.+  ..++.++|||||||++|||++|+.||.......
T Consensus       138 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  217 (327)
T cd08227         138 GKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ  217 (327)
T ss_pred             CcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH
Confidence            9999999986543321111      01112346778999998865  468899999999999999999999996431111


Q ss_pred             chhhhHHHHHHhhhcccccccc----------------------------------------ccccCHHHHHHHHHHHHH
Q 038002          622 DEVLLSTWVYNCFVAGEFNKLV----------------------------------------EEEVDKITLERMVKTGLL  661 (702)
Q Consensus       622 ~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~l~~li~~  661 (702)
                        ..... .     .+......                                        ...........+.+++.+
T Consensus       218 --~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  289 (327)
T cd08227         218 --MLLEK-L-----NGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQ  289 (327)
T ss_pred             --HHHHH-h-----cCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHH
Confidence              00000 0     00000000                                        001122345688999999


Q ss_pred             cccCCCCCCCCHHHHHH
Q 038002          662 CIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       662 cL~~dP~~RPt~~evl~  678 (702)
                      ||+.||++|||++|+++
T Consensus       290 ~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         290 CLQRNPDARPSASTLLN  306 (327)
T ss_pred             HHhhCchhcCCHHHHhc
Confidence            99999999999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.95  E-value=5.1e-28  Score=248.35  Aligned_cols=195  Identities=25%  Similarity=0.326  Sum_probs=154.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++.+.. ...++||||+++++|.+++.... ..+++..+..++.|++.||+|||++   +++|+||||+||+++.+
T Consensus        58 iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~  133 (257)
T cd05040          58 LIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASD  133 (257)
T ss_pred             ccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecC
Confidence            6777777777 89999999999999999998765 4688999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCc--eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhh
Q 038002          550 WRAKISDFGLAKLLMPNQTG--IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLL  626 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~  626 (702)
                      +.+||+|||++..+......  ......++..|+|||.+.+..++.++||||||+++|||++ |..||.....  .+  .
T Consensus       134 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~--~  209 (257)
T cd05040         134 DKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG--SQ--I  209 (257)
T ss_pred             CEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH--HH--H
Confidence            99999999999876442221  1112446778999999988889999999999999999998 9999964311  11  1


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                      .....   .....     ...+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus       210 ~~~~~---~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         210 LKKID---KEGER-----LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHH---hcCCc-----CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            11010   01100     0112234567889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.95  E-value=9.4e-28  Score=249.90  Aligned_cols=193  Identities=25%  Similarity=0.364  Sum_probs=150.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..++..++||||+++++|..+.     .+++..+..++.|++.||+|||+.   +|+|+||||+||+++.++
T Consensus        61 iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~  132 (279)
T cd06619          61 IIGFYGAFFVENRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRG  132 (279)
T ss_pred             eeeEEEEEEECCEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCC
Confidence            888889999999999999999999997653     467888899999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||++.......   .....++..|+|||.+.+..++.++|+||||+++|+|++|+.||.............. .
T Consensus       133 ~~~l~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~  208 (279)
T cd06619         133 QVKLCDFGVSTQLVNSI---AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQ-L  208 (279)
T ss_pred             CEEEeeCCcceeccccc---ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHH-H
Confidence            99999999998653322   2335688999999999888899999999999999999999999965322111111001 1


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ............    .......++.+++.+||+.+|++||+++|+++.
T Consensus       209 ~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         209 LQCIVDEDPPVL----PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             HHHHhccCCCCC----CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            111111111111    112234578899999999999999999999864

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.95  E-value=4.8e-28  Score=248.29  Aligned_cols=191  Identities=30%  Similarity=0.390  Sum_probs=150.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++..+..+ ..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+.   +++||||||+||+++.+
T Consensus        61 i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~  136 (254)
T cd05083          61 LVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSED  136 (254)
T ss_pred             cCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCC
Confidence            67777666554 4799999999999999997654 3578999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.+||+|||++.......    .....+..|+|||.+.+..++.++|+||||+++|||++ |+.||......  +     
T Consensus       137 ~~~kl~Dfg~~~~~~~~~----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~-----  205 (254)
T cd05083         137 GVAKVSDFGLARVGSMGV----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK--E-----  205 (254)
T ss_pred             CcEEECCCccceeccccC----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH--H-----
Confidence            999999999987643221    12234567999999988889999999999999999998 99998643211  0     


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                       .......+..     .......+..+.+++.+||+.+|++||+++++++.|++
T Consensus       206 -~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         206 -VKECVEKGYR-----MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             -HHHHHhCCCC-----CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence             1111111111     11122345678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.95  E-value=2.2e-28  Score=262.56  Aligned_cols=200  Identities=28%  Similarity=0.381  Sum_probs=149.4

Q ss_pred             eeeEEEEE-ecCCeeEEEEecCCCCCHHHHhhcCC---------------------------------------------
Q 038002          471 ISSLLVYK-HRSSKKLLVYEFMSKGSLADLLFNLE---------------------------------------------  504 (702)
Q Consensus       471 i~~l~~~~-~~~~~~~lV~e~~~~gsL~~~l~~~~---------------------------------------------  504 (702)
                      |+++++.+ ..+...++||||+++|+|.+++....                                             
T Consensus        73 iv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (343)
T cd05103          73 VVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGF  152 (343)
T ss_pred             HhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccc
Confidence            44555444 34567899999999999999986431                                             


Q ss_pred             ---------------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          505 ---------------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       505 ---------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                                           ..+++.++..++.||++||+|||++   +|+||||||+||+++.++.+||+|||++...
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~  229 (343)
T cd05103         153 VEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDI  229 (343)
T ss_pred             cCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEeccccccc
Confidence                                 1256778889999999999999999   9999999999999999999999999999865


Q ss_pred             CCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhcccccc
Q 038002          564 MPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNK  641 (702)
Q Consensus       564 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  641 (702)
                      ...... ......++..|+|||.+.+..++.++||||||+++|||++ |..||....... .  .    ......+... 
T Consensus       230 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~--~----~~~~~~~~~~-  301 (343)
T cd05103         230 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-E--F----CRRLKEGTRM-  301 (343)
T ss_pred             ccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-H--H----HHHHhccCCC-
Confidence            332211 1122345678999999988889999999999999999997 999986431111 1  1    1111111110 


Q ss_pred             ccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          642 LVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       642 ~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                          ..+......+.+++.+||+.||++||++.||++.|+.+.+
T Consensus       302 ----~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         302 ----RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             ----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence                1111234568899999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.95  E-value=3e-28  Score=263.74  Aligned_cols=189  Identities=20%  Similarity=0.219  Sum_probs=139.3

Q ss_pred             CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          482 SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       482 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      ...|+||||+++ +|.+.+..   .+++..+..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||+++
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~  174 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR  174 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence            467999999975 77777743   478888999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH--------H---H
Q 038002          562 LLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST--------W---V  630 (702)
Q Consensus       562 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~--------~---~  630 (702)
                      ......  ......+++.|+|||++.+..++.++|||||||++|||++|+.||..............        .   .
T Consensus       175 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (364)
T cd07875         175 TAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL  252 (364)
T ss_pred             ccCCCC--cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence            653222  22345689999999999998999999999999999999999999965421110000000        0   0


Q ss_pred             H---Hhh--hcccc-----cccc-------ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          631 Y---NCF--VAGEF-----NKLV-------EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       631 ~---~~~--~~~~~-----~~~~-------~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .   ...  .....     ....       +..........+.+++.+||+.||.+|||++|+++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             hHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            0   000  00000     0000       001112234578899999999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.95  E-value=5.3e-28  Score=255.63  Aligned_cols=201  Identities=24%  Similarity=0.326  Sum_probs=152.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++.+..++..++||||+++++|.+++.... .+++..+..++.|+++||+|||+ .   +++|+||||+||+++.+
T Consensus        61 iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dl~p~nil~~~~  136 (308)
T cd06615          61 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPENILGKISIAVLRGLTYLREKH---KIMHRDVKPSNILVNSR  136 (308)
T ss_pred             CCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhhC---CEEECCCChHHEEEecC
Confidence            7888899999999999999999999999997654 68899999999999999999997 5   89999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      +.+||+|||++.......   .....++..|+|||.+.+..++.++|+||||+++|+|++|+.||...............
T Consensus       137 ~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  213 (308)
T cd06615         137 GEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRP  213 (308)
T ss_pred             CcEEEccCCCcccccccc---cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCc
Confidence            999999999987543221   23356789999999988888999999999999999999999999643211100000000


Q ss_pred             HHHhhhcc---------------------cccccc---cccc-CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          630 VYNCFVAG---------------------EFNKLV---EEEV-DKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~---------------------~~~~~~---~~~~-~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                       .......                     ......   .+.. .......+.+++.+||+.||++||++++|++.
T Consensus       214 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         214 -VSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             -cccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             0000000                     000000   0000 01245578999999999999999999999876

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.95  E-value=8.9e-28  Score=250.16  Aligned_cols=205  Identities=25%  Similarity=0.351  Sum_probs=156.5

Q ss_pred             eeeEEEEEec--CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHR--SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |+++.+++..  +...++||||+++++|.+++......+++..+..++.|++.||+|||+.   +++|+||||+||+++.
T Consensus        68 i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~  144 (284)
T cd05038          68 IVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVES  144 (284)
T ss_pred             hheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcC
Confidence            6667777666  6689999999999999999987766799999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCce--eeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh--
Q 038002          549 SWRAKISDFGLAKLLMPNQTGI--VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV--  624 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~--  624 (702)
                      ++.++|+|||.+..........  .....++..|+|||.+.+..++.++||||||++++||++|..|+..........  
T Consensus       145 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~  224 (284)
T cd05038         145 EDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIG  224 (284)
T ss_pred             CCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccc
Confidence            9999999999998765332211  112234567999999988889999999999999999999999986432111000  


Q ss_pred             -----hhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          625 -----LLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       625 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                           ..............     ....+......+.+++.+||+.+|++||++.||+++|+++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         225 IAQGQMIVTRLLELLKEGE-----RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             cccccccHHHHHHHHHcCC-----cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence                 00000111111110     0111223346789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.95  E-value=6.4e-28  Score=249.63  Aligned_cols=199  Identities=22%  Similarity=0.302  Sum_probs=148.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  547 (702)
                      |+++++.+......++||||+++|+|.+++.+..   ...++..+..++.||++||+|||+.   +++|+||||+||+++
T Consensus        57 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~  133 (268)
T cd05086          57 ILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLT  133 (268)
T ss_pred             hhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEc
Confidence            7788888899999999999999999999997642   2356677888999999999999999   999999999999999


Q ss_pred             CCCcEEEecccceeecCCCC-CceeeceeccccccCcccccC-------CCCCccccccchhHhHHHhhh-CCcCCcCCC
Q 038002          548 DSWRAKISDFGLAKLLMPNQ-TGIVAGVRGSRGYMAPEWQNS-------GLITVKSDVYSFGVVLLEIIC-CRSNFEVNV  618 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~  618 (702)
                      .++.+||+|||++....... ........++..|+|||++..       ..++.++||||||+++|||++ |..||....
T Consensus       134 ~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~  213 (268)
T cd05086         134 SDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS  213 (268)
T ss_pred             CCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Confidence            99999999999986432211 111223457889999998743       245789999999999999997 466775321


Q ss_pred             CCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          619 STADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                         .....     .....+......++.......+.+.+++..|| .+|++||++++|+++|.
T Consensus       214 ---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         214 ---DREVL-----NHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             ---HHHHH-----HHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence               11111     11111222222333333335567788888899 57999999999999885

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.95  E-value=3.5e-28  Score=260.67  Aligned_cols=185  Identities=19%  Similarity=0.230  Sum_probs=153.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE-eCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI-DDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll-~~~  549 (702)
                      |+++...+.++.+.|+|||.+.|+-|.+.+...+ ... .++..|+++|+.|+.|||++   ||+||||||+|||+ +..
T Consensus       378 iv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~-~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~  452 (612)
T KOG0603|consen  378 IVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKP-EFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSA  452 (612)
T ss_pred             ceeecceecCCceeeeeehhccccHHHHHHHhcc-hhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCC
Confidence            7888899999999999999999999888887654 233 78888999999999999999   99999999999999 589


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      ++++|+|||.++.....    ....+-|..|.|||++....+++++||||||++||+|++|+.||......   ..    
T Consensus       453 g~lrltyFG~a~~~~~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~e----  521 (612)
T KOG0603|consen  453 GHLRLTYFGFWSELERS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IE----  521 (612)
T ss_pred             CcEEEEEechhhhCchh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HH----
Confidence            99999999999876444    33446688999999999999999999999999999999999999765222   11    


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      +...+..+.        .....++...+|+.+||+.||.+||+|.++...
T Consensus       522 i~~~i~~~~--------~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  522 IHTRIQMPK--------FSECVSDEAKDLLQQLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             HHHhhcCCc--------cccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence            112222222        225567889999999999999999999998763

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.95  E-value=7.7e-28  Score=252.88  Aligned_cols=206  Identities=23%  Similarity=0.269  Sum_probs=154.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++.+++..++||||+ +++|.+++......+++.++..++.||++||+|||++   +|+|+||||+||+++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~  139 (298)
T cd07841          64 IIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDG  139 (298)
T ss_pred             ChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCC
Confidence            677778888899999999999 8999999977654689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .++|+|||++........ ......+++.|+|||.+.+ ..++.++||||||+++|||++|..||....... .  +.. 
T Consensus       140 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~--~~~-  214 (298)
T cd07841         140 VLKLADFGLARSFGSPNR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-Q--LGK-  214 (298)
T ss_pred             CEEEccceeeeeccCCCc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-H--HHH-
Confidence            999999999987643321 2223346788999998754 467899999999999999999987776432111 1  100 


Q ss_pred             HHHhhhcc---------ccccccc---------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhCCcC
Q 038002          630 VYNCFVAG---------EFNKLVE---------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM--LEGTME  685 (702)
Q Consensus       630 ~~~~~~~~---------~~~~~~~---------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~--Le~~~~  685 (702)
                      ........         .......         ..........+.+++.+||+.||++|||++|+++.  +++...
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~  290 (298)
T cd07841         215 IFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPA  290 (298)
T ss_pred             HHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCC
Confidence            00000000         0000000         01123346788999999999999999999999985  444433

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.95  E-value=5.5e-28  Score=247.76  Aligned_cols=193  Identities=22%  Similarity=0.268  Sum_probs=155.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..+...++++||+++++|.+++......+++.++..++.|++.||+|||+.   +++|+||+|+||+++.++
T Consensus        60 i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~  136 (256)
T cd06612          60 IVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEG  136 (256)
T ss_pred             EeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCC
Confidence            78888899999999999999999999999987666789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++........ ......++..|+|||.+.+..++.++||||||+++|+|++|+.||..........      
T Consensus       137 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~------  209 (256)
T cd06612         137 QAKLADFGVSGQLTDTMA-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF------  209 (256)
T ss_pred             cEEEcccccchhcccCcc-ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh------
Confidence            999999999987643321 2233457889999999988889999999999999999999999996432111000      


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       . .... ...  ....+......+.+++.+||+.||++|||++|+++
T Consensus       210 -~-~~~~-~~~--~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         210 -M-IPNK-PPP--TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             -h-hccC-CCC--CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence             0 0000 000  00122334567899999999999999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.95  E-value=5.2e-28  Score=278.67  Aligned_cols=199  Identities=18%  Similarity=0.246  Sum_probs=152.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC----------CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL----------ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIK  540 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~----------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlk  540 (702)
                      |++++..+.+++..++||||++|++|.+++...          ....++..++.++.||++||+|||++   +|+|||||
T Consensus        64 IVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLK  140 (932)
T PRK13184         64 IVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLK  140 (932)
T ss_pred             cCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCc
Confidence            677888888999999999999999999998642          12345677889999999999999999   99999999


Q ss_pred             CCcEEEeCCCcEEEecccceeecCCCCC-----------------ceeeceeccccccCcccccCCCCCccccccchhHh
Q 038002          541 LRNILIDDSWRAKISDFGLAKLLMPNQT-----------------GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV  603 (702)
Q Consensus       541 p~NIll~~~~~~kl~Dfg~a~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  603 (702)
                      |+||+++.++.+||+|||++........                 .......||+.|+|||.+.+..++.++|||||||+
T Consensus       141 PeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVI  220 (932)
T PRK13184        141 PDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVI  220 (932)
T ss_pred             hheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHH
Confidence            9999999999999999999987621110                 01123468999999999999999999999999999


Q ss_pred             HHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhC
Q 038002          604 LLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-SMKNVILMLEG  682 (702)
Q Consensus       604 l~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-t~~evl~~Le~  682 (702)
                      +|||++|+.||......  .....    ......     .........+..+.+++.+||+.||++|| +++++++.|+.
T Consensus       221 LyELLTG~~PF~~~~~~--ki~~~----~~i~~P-----~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~  289 (932)
T PRK13184        221 LYQMLTLSFPYRRKKGR--KISYR----DVILSP-----IEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEP  289 (932)
T ss_pred             HHHHHHCCCCCCCcchh--hhhhh----hhccCh-----hhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            99999999999653111  11000    000000     00001123456788899999999999996 67778887776


Q ss_pred             C
Q 038002          683 T  683 (702)
Q Consensus       683 ~  683 (702)
                      .
T Consensus       290 ~  290 (932)
T PRK13184        290 H  290 (932)
T ss_pred             H
Confidence            4

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.95  E-value=6.4e-28  Score=248.93  Aligned_cols=193  Identities=20%  Similarity=0.264  Sum_probs=153.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++.+++..++..++||||+++++|.+++.+.. .+++..+..++.|++.||+|||+.   +|+|+||+|+||++++++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~  139 (265)
T cd06631          64 IVQYLGTCLDDNTISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNG  139 (265)
T ss_pred             EeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCC
Confidence            7888889999999999999999999999997654 678899999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCC-----CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          551 RAKISDFGLAKLLMPNQ-----TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                      .++|+|||++.......     ........++..|+|||.+.+..++.++|+||||+++|+|++|..||........   
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~---  216 (265)
T cd06631         140 IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA---  216 (265)
T ss_pred             eEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH---
Confidence            99999999987643211     1112235588899999999888899999999999999999999999964311110   


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .    ........    ..+..+......+.+++.+||+.+|++||+++++++
T Consensus       217 ~----~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         217 M----FYIGAHRG----LMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             H----HHhhhccC----CCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            0    00000000    011223345667899999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.95  E-value=9.9e-28  Score=246.12  Aligned_cols=192  Identities=22%  Similarity=0.344  Sum_probs=152.1

Q ss_pred             eeeEEEEEe-cCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKH-RSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      ++++...+. .+...++||||+++++|.+++.... ..+++.++..++.|++.||++||+.   +|+|+||||+||+++.
T Consensus        61 i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~  137 (257)
T cd08223          61 IVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTR  137 (257)
T ss_pred             eeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEec
Confidence            666666555 4557899999999999999997643 3588999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      ++.++|+|||++........ ......+++.|+|||.+.+..++.++|+||||+++++|++|+.||.....   .    .
T Consensus       138 ~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~---~----~  209 (257)
T cd08223         138 TNIIKVGDLGIARVLENQCD-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM---N----S  209 (257)
T ss_pred             CCcEEEecccceEEecccCC-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH---H----H
Confidence            99999999999987643222 22345678999999999888899999999999999999999999964311   1    1


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .... ...+..     +..+......+.+++.+||+.||++||++.++++.
T Consensus       210 ~~~~-~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         210 LVYR-IIEGKL-----PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             HHHH-HHhcCC-----CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            1111 111111     11233456789999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.95  E-value=6.5e-28  Score=251.54  Aligned_cols=203  Identities=21%  Similarity=0.221  Sum_probs=149.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE--TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |+++++.+.+++..++||||++ ++|.+++....  ..+++.++..++.||++||+|||++   +|+|+||||+||+++.
T Consensus        61 i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~  136 (285)
T cd07861          61 IVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDN  136 (285)
T ss_pred             EeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcC
Confidence            7888889999999999999997 58988886543  3588999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      ++.+||+|||++....... .......+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||.............
T Consensus       137 ~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~  215 (285)
T cd07861         137 KGVIKLADFGLARAFGIPV-RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIF  215 (285)
T ss_pred             CCcEEECcccceeecCCCc-ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            9999999999997653322 11223456889999998765 457899999999999999999999997542111100000


Q ss_pred             HHH-------HHhh-----hcccccccccc---ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          628 TWV-------YNCF-----VAGEFNKLVEE---EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       628 ~~~-------~~~~-----~~~~~~~~~~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ...       +...     ...........   .......+++.+++.+||+.||++|||+++|++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         216 RILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            000       0000     00000000000   111224567789999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.95  E-value=1.2e-27  Score=245.56  Aligned_cols=193  Identities=22%  Similarity=0.342  Sum_probs=157.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++++.+++..++||||+++++|.+++... ...+++.++..++.|++.+|+|||+.   +++|+||+|+||+++.+
T Consensus        61 i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~  137 (256)
T cd08221          61 IIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKA  137 (256)
T ss_pred             eeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCC
Confidence            888999999999999999999999999999765 34588999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      +.+||+|||++........ ......+++.|+|||.+.+..++.++|+||||++++||++|+.||......       + 
T Consensus       138 ~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-------~-  208 (256)
T cd08221         138 GLIKLGDFGISKILGSEYS-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-------N-  208 (256)
T ss_pred             CCEEECcCcceEEcccccc-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-------H-
Confidence            9999999999987644332 233456889999999998888899999999999999999999999643111       1 


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML  680 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  680 (702)
                      .......+....     ........+.+++.+||+.+|++||+++++++.+
T Consensus       209 ~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         209 LVVKIVQGNYTP-----VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             HHHHHHcCCCCC-----CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence            111111222111     1233456788999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.95  E-value=1.3e-27  Score=247.06  Aligned_cols=194  Identities=25%  Similarity=0.315  Sum_probs=151.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCC--CHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRP--LWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~--~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |+++++++..++..++||||+++++|.+++......+  ++..+..++.||+.||+|||+.   +|+|+||||+||+++.
T Consensus        67 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~  143 (268)
T cd06624          67 IVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNT  143 (268)
T ss_pred             eeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcC
Confidence            7888889999999999999999999999998654344  7888889999999999999999   9999999999999976


Q ss_pred             -CCcEEEecccceeecCCCCCceeeceeccccccCcccccCC--CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          549 -SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG--LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       549 -~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                       ++.++|+|||++........ ......+++.|+|||++...  .++.++|+||||+++|+|++|+.||.......... 
T Consensus       144 ~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~-  221 (268)
T cd06624         144 YSGVVKISDFGTSKRLAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM-  221 (268)
T ss_pred             CCCeEEEecchhheecccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH-
Confidence             67999999999876533221 12234578899999988654  37889999999999999999999996432111100 


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                           .......     ..+..+....+.+.+++.+||+.+|++|||++|+++.
T Consensus       222 -----~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         222 -----FKVGMFK-----IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             -----hhhhhhc-----cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence                 0000000     1112333456778999999999999999999999863

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.95  E-value=1.1e-27  Score=250.47  Aligned_cols=196  Identities=26%  Similarity=0.342  Sum_probs=153.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---------------------CCCCHHHHHHHHHHHHHHHHhhhhc
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------------------TRPLWRDRVRIALDVARGLLYLHDE  529 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------------~~~~~~~~~~i~~qi~~aL~~LH~~  529 (702)
                      |+++++++..++..++||||+++++|.+++....                     ..+++.+++.++.|++.||+|||++
T Consensus        70 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~  149 (288)
T cd05050          70 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER  149 (288)
T ss_pred             hheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC
Confidence            7788888899999999999999999999997432                     1367888899999999999999999


Q ss_pred             CCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhh
Q 038002          530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII  608 (702)
Q Consensus       530 ~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell  608 (702)
                         +++||||||+||+++.++.++|+|||++........ ........+..|+|||.+.+..++.++||||||+++|||+
T Consensus       150 ---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~  226 (288)
T cd05050         150 ---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF  226 (288)
T ss_pred             ---CeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHH
Confidence               999999999999999999999999999876533221 1112223466799999988888999999999999999999


Q ss_pred             h-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          609 C-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       609 t-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      + |..||.....  .+      .......+...     ..+...+..+.+++.+||+.||++|||++|+++.|+.
T Consensus       227 ~~~~~p~~~~~~--~~------~~~~~~~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         227 SYGMQPYYGMAH--EE------VIYYVRDGNVL-----SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             hCCCCCCCCCCH--HH------HHHHHhcCCCC-----CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            7 8888853311  11      11111122211     1122345678999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.95  E-value=1.4e-27  Score=255.37  Aligned_cols=199  Identities=28%  Similarity=0.371  Sum_probs=156.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                      |++++..+..++..++||||+++|+|.+++....               ..+++.++..++.|++.||+|||++   +|+
T Consensus        80 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---giv  156 (334)
T cd05100          80 IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCI  156 (334)
T ss_pred             eeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Cee
Confidence            7788888888999999999999999999997532               2467888999999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcC
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSN  613 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~P  613 (702)
                      ||||||+||+++.++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..|
T Consensus       157 H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p  236 (334)
T cd05100         157 HRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP  236 (334)
T ss_pred             ccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999999865432211 1112234567999999988899999999999999999998 8888


Q ss_pred             CcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          614 FEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       614 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      |.....  ++      .......+..     ...+......+.+++.+||+.+|++||++.|+++.|+.+..
T Consensus       237 ~~~~~~--~~------~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         237 YPGIPV--EE------LFKLLKEGHR-----MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             CCCCCH--HH------HHHHHHcCCC-----CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            864311  11      1111111111     11122345678899999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.95  E-value=1.4e-27  Score=244.76  Aligned_cols=194  Identities=30%  Similarity=0.418  Sum_probs=155.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCC-CCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR-PLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~-~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++..+.+.+..++||||+++++|.+++...... +++.++..++.|++.||++||+.   +++|+||||+||+++.+
T Consensus        63 i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~  139 (258)
T smart00219       63 IVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGEN  139 (258)
T ss_pred             hheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccC
Confidence            778888888899999999999999999999876544 89999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.++|+|||++...............+++.|+|||.+....++.++||||+|+++++|++ |+.||....    ....  
T Consensus       140 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~----~~~~--  213 (258)
T smart00219      140 LVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS----NEEV--  213 (258)
T ss_pred             CeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC----HHHH--
Confidence            999999999998765442222212336789999999888889999999999999999998 788886421    1111  


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML  680 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  680 (702)
                        ..........     ......+.++.+++.+||+.||++|||+.|+++.|
T Consensus       214 --~~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      214 --LEYLKKGYRL-----PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             --HHHHhcCCCC-----CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence              1111111111     11222466788999999999999999999999875

Phosphotransferases. Tyrosine-specific kinase subfamily.

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.95  E-value=1.9e-27  Score=249.63  Aligned_cols=187  Identities=17%  Similarity=0.202  Sum_probs=139.9

Q ss_pred             eeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          483 KKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       483 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      ..++++|++. .++.+.+.... ..++..+..++.|+++||+|||+.   +|+||||||+|||++.++.++|+|||+++.
T Consensus       101 ~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~~l~DFGla~~  175 (294)
T PHA02882        101 YRFILLEKLV-ENTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYIIDYGIASH  175 (294)
T ss_pred             EEEEEEehhc-cCHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcEEEEEcCCcee
Confidence            4478888874 36777765543 457888899999999999999999   999999999999999999999999999987


Q ss_pred             cCCCCC------ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH-HHHhhh
Q 038002          563 LMPNQT------GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW-VYNCFV  635 (702)
Q Consensus       563 ~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~-~~~~~~  635 (702)
                      +.....      .......||+.|+|||...+..++.++|||||||++|||++|..||............... ......
T Consensus       176 ~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~  255 (294)
T PHA02882        176 FIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLH  255 (294)
T ss_pred             eccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhh
Confidence            643221      1112346999999999999999999999999999999999999999765222211111110 111111


Q ss_pred             ccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          636 AGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                      .+...       .......+.+++..|++.+|++||+++++++.|+
T Consensus       256 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        256 EGKIK-------IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             hhhhc-------cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence            11110       1122467888999999999999999999998874

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.95  E-value=8.2e-28  Score=252.78  Aligned_cols=191  Identities=22%  Similarity=0.278  Sum_probs=152.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..++..++||||+++++|.+++.+.  .+++.++..++.|++.||.|||+.   +|+|+||||+||+++.++
T Consensus        78 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~  152 (297)
T cd06656          78 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDG  152 (297)
T ss_pred             EeeEEEEEecCCEEEEeecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence            778888999999999999999999999998653  578899999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||++........ ......+++.|+|||.+.+..++.++|+||||+++|+|++|..||........  ..    
T Consensus       153 ~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~--~~----  225 (297)
T cd06656         153 SVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LY----  225 (297)
T ss_pred             CEEECcCccceEccCCcc-CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh--ee----
Confidence            999999999886543322 12234578899999999888899999999999999999999999964421110  00    


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       .....+ ...   ...+......+.+++.+||+.+|++||+++++++
T Consensus       226 -~~~~~~-~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         226 -LIATNG-TPE---LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             -eeccCC-CCC---CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence             000000 000   0112334566888999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.95  E-value=9.2e-28  Score=247.92  Aligned_cols=191  Identities=27%  Similarity=0.335  Sum_probs=154.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++.+++..++||||+++++|.+++.... .+++..+..++.|++.||+|||+.   +++|+||+|+||++++++
T Consensus        68 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~  143 (267)
T cd06628          68 IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKG  143 (267)
T ss_pred             eeeEEEEEEeCCccEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCC
Confidence            7788889999999999999999999999997654 678889999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCC-----ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          551 RAKISDFGLAKLLMPNQT-----GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                      .++|+|||.++.......     .......++..|+|||.+.+..++.++|+||||+++|+|++|+.||......  . .
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~-~  220 (267)
T cd06628         144 GIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL--Q-A  220 (267)
T ss_pred             CEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH--H-H
Confidence            999999999987642211     1112345788999999998888899999999999999999999999643110  0 0


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                          .. ....     ...+..+......+.+++.+||+.||++||++.|+++
T Consensus       221 ----~~-~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         221 ----IF-KIGE-----NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             ----HH-HHhc-----cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence                00 0001     1112233345678889999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.95  E-value=5.9e-28  Score=243.59  Aligned_cols=227  Identities=17%  Similarity=0.169  Sum_probs=172.0

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------------eeeEEEEEecCCeeEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------------i~~l~~~~~~~~~~~l  486 (702)
                      .++.....+|+|.|  |.......  ..||+|                                ++++..+|.-.++.+|
T Consensus        89 ~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCi  168 (415)
T KOG0671|consen   89 NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICI  168 (415)
T ss_pred             cceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEE
Confidence            45566678899988  55554443  677776                                7777888999999999


Q ss_pred             EEecCCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC-----------------
Q 038002          487 VYEFMSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD-----------------  548 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~-----------------  548 (702)
                      |+|.+ |.|+.++|.++.. .++...+..|+.|+++++++||+.   +++|.||||||||+.+                 
T Consensus       169 vfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r  244 (415)
T KOG0671|consen  169 VFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVCFIR  244 (415)
T ss_pred             EEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCccceec
Confidence            99999 6799999987643 478899999999999999999999   9999999999999931                 


Q ss_pred             ---CCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          549 ---SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       549 ---~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                         +..++|+|||.|.......    ..+..|..|.|||++.+-.++..+||||+||||.|+.+|...|+.....+ ...
T Consensus       245 ~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E-HLa  319 (415)
T KOG0671|consen  245 PLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE-HLA  319 (415)
T ss_pred             cCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHH-HHH
Confidence               3358999999998754333    44567999999999999999999999999999999999999998664222 111


Q ss_pred             hHHHHHHh--------------hhcccc-----------cccccc--------ccCHHHHHHHHHHHHHcccCCCCCCCC
Q 038002          626 LSTWVYNC--------------FVAGEF-----------NKLVEE--------EVDKITLERMVKTGLLCIQDEPNLRPS  672 (702)
Q Consensus       626 ~~~~~~~~--------------~~~~~~-----------~~~~~~--------~~~~~~~~~l~~li~~cL~~dP~~RPt  672 (702)
                      ..+.+...              ...+.+           ....+.        .....+..++.+|+.+||..||.+|+|
T Consensus       320 MMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiT  399 (415)
T KOG0671|consen  320 MMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRIT  399 (415)
T ss_pred             HHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccccc
Confidence            11111110              000000           000000        123455667999999999999999999


Q ss_pred             HHHHHH
Q 038002          673 MKNVIL  678 (702)
Q Consensus       673 ~~evl~  678 (702)
                      +.|++.
T Consensus       400 l~EAL~  405 (415)
T KOG0671|consen  400 LREALS  405 (415)
T ss_pred             HHHHhc
Confidence            999985

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1e-27  Score=254.28  Aligned_cols=193  Identities=20%  Similarity=0.184  Sum_probs=151.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++.+..++..++||||+.+++|.+++.... ..+++..+..++.|+++||+|||+.   +++|+||||+||+++.+
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~  139 (316)
T cd05574          63 LPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHES  139 (316)
T ss_pred             chhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCC
Confidence            6777888889999999999999999999997643 4688999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCc----------------------------eeeceeccccccCcccccCCCCCccccccchh
Q 038002          550 WRAKISDFGLAKLLMPNQTG----------------------------IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFG  601 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  601 (702)
                      +.++|+|||++.........                            ......|+..|+|||.+.+..++.++||||||
T Consensus       140 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG  219 (316)
T cd05574         140 GHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLG  219 (316)
T ss_pred             CCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHH
Confidence            99999999998754322110                            01124578899999999888899999999999


Q ss_pred             HhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCC----HHHHH
Q 038002          602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPS----MKNVI  677 (702)
Q Consensus       602 vil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt----~~evl  677 (702)
                      +++|+|++|..||......   .....     .......    ..........+.+++.+||+.||++||+    ++|++
T Consensus       220 ~ll~~l~~g~~pf~~~~~~---~~~~~-----~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll  287 (316)
T cd05574         220 ILLYEMLYGTTPFKGSNRD---ETFSN-----ILKKEVT----FPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIK  287 (316)
T ss_pred             HHHHHHhhCCCCCCCCchH---HHHHH-----HhcCCcc----CCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHH
Confidence            9999999999999644211   11111     1111110    0111125678999999999999999999    66666


Q ss_pred             H
Q 038002          678 L  678 (702)
Q Consensus       678 ~  678 (702)
                      +
T Consensus       288 ~  288 (316)
T cd05574         288 Q  288 (316)
T ss_pred             c
Confidence            6

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.95  E-value=9e-28  Score=250.53  Aligned_cols=201  Identities=23%  Similarity=0.275  Sum_probs=153.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++.++..+...++||||+ +++|.+++......+++.++..++.||++||+|||++   +++|+||||+||+++.++
T Consensus        61 i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~  136 (286)
T cd07832          61 VVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADG  136 (286)
T ss_pred             CcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCC
Confidence            778888889999999999999 9999999977666789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .++|+|||++...............++..|+|||.+.+ ..++.++||||+|++++||++|..||......   ... ..
T Consensus       137 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~---~~~-~~  212 (286)
T cd07832         137 VLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI---EQL-AI  212 (286)
T ss_pred             cEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH---HHH-HH
Confidence            99999999998765433222334568899999998765 45689999999999999999998887543211   111 00


Q ss_pred             HHHhhhcc------------ccccccc--------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          630 VYNCFVAG------------EFNKLVE--------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~------------~~~~~~~--------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ........            .......        .+........+.+++.+||+.||++||+++++++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         213 VFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             HHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            10000000            0000000        01112345788999999999999999999999864

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.95  E-value=1.1e-27  Score=253.88  Aligned_cols=143  Identities=22%  Similarity=0.328  Sum_probs=116.3

Q ss_pred             eeeEEEEE--ecCCeeEEEEecCCCCCHHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCC
Q 038002          471 ISSLLVYK--HRSSKKLLVYEFMSKGSLADLLFNL--------ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIK  540 (702)
Q Consensus       471 i~~l~~~~--~~~~~~~lV~e~~~~gsL~~~l~~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlk  540 (702)
                      |++++..+  ..+...++||||+.+ +|.+++...        ...+++..+..++.||+.||+|||++   +|+|||||
T Consensus        60 iv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlk  135 (317)
T cd07867          60 VIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLK  135 (317)
T ss_pred             eeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCC
Confidence            67777665  456788999999865 788877422        12477888999999999999999999   99999999


Q ss_pred             CCcEEE----eCCCcEEEecccceeecCCCCC--ceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcC
Q 038002          541 LRNILI----DDSWRAKISDFGLAKLLMPNQT--GIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSN  613 (702)
Q Consensus       541 p~NIll----~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~P  613 (702)
                      |+||++    +.++.+||+|||+++.......  .......+|+.|+|||.+.+ ..++.++||||||+++|||++|+.|
T Consensus       136 p~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~  215 (317)
T cd07867         136 PANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI  215 (317)
T ss_pred             HHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCC
Confidence            999999    5667899999999987643322  12234568999999998866 4578999999999999999999999


Q ss_pred             CcCC
Q 038002          614 FEVN  617 (702)
Q Consensus       614 f~~~  617 (702)
                      |...
T Consensus       216 f~~~  219 (317)
T cd07867         216 FHCR  219 (317)
T ss_pred             cccc
Confidence            9654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.95  E-value=3.5e-28  Score=253.56  Aligned_cols=203  Identities=17%  Similarity=0.151  Sum_probs=149.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+.+++..++|+||++ ++|.+++......+++..+..++.||++||+|||++   +|+|+||||+||+++.++
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~  136 (284)
T cd07839          61 IVRLYDVLHSDKKLTLVFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNG  136 (284)
T ss_pred             eeeHHHHhccCCceEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCC
Confidence            6777778888999999999997 488888876555789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH-H
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS-T  628 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~-~  628 (702)
                      .+||+|||++........ ......++..|+|||.+.+. .++.++||||||+++|||++|..|+............. .
T Consensus       137 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~  215 (284)
T cd07839         137 ELKLADFGLARAFGIPVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR  215 (284)
T ss_pred             cEEECccchhhccCCCCC-CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHH
Confidence            999999999986533221 12234568899999987664 57899999999999999999999875432211111000 0


Q ss_pred             -------HHHHhhh---cccccccccc-----ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          629 -------WVYNCFV---AGEFNKLVEE-----EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       629 -------~~~~~~~---~~~~~~~~~~-----~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                             ..+....   ..........     ...+..++.+.+++.+||+.||.+|||++++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         216 LLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             HhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence                   0000000   0000000000     112234678889999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=6.3e-28  Score=248.25  Aligned_cols=192  Identities=24%  Similarity=0.281  Sum_probs=153.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      +++++..+..++..|+||||+++++|.+++.... .+++..+..++.|++.||.|||+.   +++|+||+|+||+++.++
T Consensus        59 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~  134 (260)
T cd05611          59 VAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTG  134 (260)
T ss_pred             eeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCC
Confidence            7888889999999999999999999999997654 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++.....     .....++..|+|||.+.+..++.++||||||+++|+|++|..||.....   ...     
T Consensus       135 ~~~l~dfg~~~~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~-----  201 (260)
T cd05611         135 HLKLTDFGLSRNGLE-----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP---DAV-----  201 (260)
T ss_pred             cEEEeecccceeccc-----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH---HHH-----
Confidence            999999999876432     1234578899999998887889999999999999999999999964311   111     


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                      ..........  ............+.+++.+||+.+|++||++.++.+.|+
T Consensus       202 ~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~  250 (260)
T cd05611         202 FDNILSRRIN--WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS  250 (260)
T ss_pred             HHHHHhcccC--CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence            1111111110  111122234678899999999999999998876666554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.95  E-value=1.4e-27  Score=249.18  Aligned_cols=203  Identities=22%  Similarity=0.253  Sum_probs=151.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.++.+...++||||++++.|..++.... .+++.++..++.|++.||+|||+.   +++|+||||+||+++.++
T Consensus        62 i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~  137 (286)
T cd07847          62 LVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQG  137 (286)
T ss_pred             EeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCC
Confidence            7888888999999999999999998888876544 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++........ ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+........
T Consensus       138 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~  216 (286)
T cd07847         138 QIKLCDFGFARILTGPGD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKT  216 (286)
T ss_pred             cEEECccccceecCCCcc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            999999999987644321 1223457789999998765 56789999999999999999999999754221111111000


Q ss_pred             HHHh-------hhcccc-cc--cccc-------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 VYNC-------FVAGEF-NK--LVEE-------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 ~~~~-------~~~~~~-~~--~~~~-------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ....       ...... ..  ....       .........+.+++.+||+.+|++||++.|++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         217 LGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             hCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            0000       000000 00  0000       001123567889999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.95  E-value=2.9e-27  Score=244.66  Aligned_cols=189  Identities=22%  Similarity=0.285  Sum_probs=153.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..++..++||||+++++|.+++.... .+++.++..++.|+++||+|||+.   +++|+||||+||+++.++
T Consensus        71 iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~  146 (267)
T PHA03390         71 FIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAK  146 (267)
T ss_pred             EEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCC
Confidence            7888999999999999999999999999997765 789999999999999999999999   999999999999999998


Q ss_pred             -cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 -RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 -~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                       .++|+|||++.......     ...++..|+|||.+.+..++.++||||||+++|||++|+.||.....  +......+
T Consensus       147 ~~~~l~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~--~~~~~~~~  219 (267)
T PHA03390        147 DRIYLCDYGLCKIIGTPS-----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED--EELDLESL  219 (267)
T ss_pred             CeEEEecCccceecCCCc-----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc--chhhHHHH
Confidence             99999999988654322     23578899999999888899999999999999999999999974321  11111111


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPS-MKNVIL  678 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt-~~evl~  678 (702)
                      ... . ..      ...........+.+++.+||+.+|.+||+ ++|+++
T Consensus       220 ~~~-~-~~------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        220 LKR-Q-QK------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             HHh-h-cc------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            111 1 10      00122245678899999999999999996 588874

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.95  E-value=1.7e-27  Score=247.66  Aligned_cols=190  Identities=22%  Similarity=0.278  Sum_probs=155.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+.++...++||||+++++|.+++...  .+++.++..++.|++.||+|||+.   +++|+||+|+||+++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~  138 (277)
T cd06640          64 VTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQG  138 (277)
T ss_pred             EeeEEEEEEECCEEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCC
Confidence            788889999999999999999999999998653  588899999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||++........ ......++..|+|||.+.+..++.++|+||||+++|||++|..||.......    ..   
T Consensus       139 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----~~---  210 (277)
T cd06640         139 DVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR----VL---  210 (277)
T ss_pred             CEEEcccccceeccCCcc-ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh----Hh---
Confidence            999999999987643221 2223457889999999988889999999999999999999999996432110    00   


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                       .....     ...+.........+.+++.+||+.+|++||+++++++.
T Consensus       211 -~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         211 -FLIPK-----NNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             -hhhhc-----CCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence             00000     11123344567789999999999999999999999765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.95  E-value=1.7e-27  Score=250.31  Aligned_cols=191  Identities=21%  Similarity=0.294  Sum_probs=152.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..++..++||||+++++|.+++...  .+++.++..++.|++.||+|||++   +++|+||||+||+++.++
T Consensus        78 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~  152 (296)
T cd06655          78 IVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDG  152 (296)
T ss_pred             eeeeeeeEecCceEEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence            778888889999999999999999999998653  589999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++........ ......++..|+|||.+.+..++.++||||||+++|+|++|+.||....... .  ... .
T Consensus       153 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~-~--~~~-~  227 (296)
T cd06655         153 SVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-A--LYL-I  227 (296)
T ss_pred             CEEEccCccchhcccccc-cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-H--HHH-H
Confidence            999999999876543322 1223457889999999988889999999999999999999999996542111 0  000 0


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                          ........   ..+......+.+++.+||+.||++||++.++++
T Consensus       228 ----~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         228 ----ATNGTPEL---QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             ----HhcCCccc---CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                00000000   112234557888999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.95  E-value=8.6e-28  Score=250.95  Aligned_cols=204  Identities=21%  Similarity=0.255  Sum_probs=152.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++.+.+..++..++||||++++.|..++.+. ..+++.++..++.||+.||+|||++   +++|+||+|+||++++++
T Consensus        62 i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~  137 (288)
T cd07833          62 IVNLKEAFRRKGRLYLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESG  137 (288)
T ss_pred             eeehhheEEECCEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCC
Confidence            777788888899999999999987777666543 3689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++...............++..|+|||++.+. .++.++||||||+++|+|++|+.||...............
T Consensus       138 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~  217 (288)
T cd07833         138 VLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKC  217 (288)
T ss_pred             CEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            999999999987654433233445678899999998877 8899999999999999999999999644211100000000


Q ss_pred             HH-------Hhh-hcc-----cccccccc-----ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 VY-------NCF-VAG-----EFNKLVEE-----EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 ~~-------~~~-~~~-----~~~~~~~~-----~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..       ... ...     ........     ..+...+..+.+++.+||+.+|++||+++++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         218 LGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             hCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            00       000 000     00000000     112233678999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.95  E-value=7.5e-28  Score=251.29  Aligned_cols=199  Identities=27%  Similarity=0.341  Sum_probs=154.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++.+...+..++||||+++++|.+++...+ .+++..+..++.|++.+|.|||+ +   +++|+||||+||+++.+
T Consensus        65 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~---~i~H~dl~p~nil~~~~  140 (284)
T cd06620          65 IVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYNVH---RIMHRDIKPSNILVNSR  140 (284)
T ss_pred             cceEeeeEecCCEEEEEEecCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHhc---CeeccCCCHHHEEECCC
Confidence            7788888999999999999999999999987654 68899999999999999999997 5   89999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcch----hh
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE----VL  625 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~----~~  625 (702)
                      +.++|+|||++.......   .....++..|+|||.+.+..++.++||||||+++|+|++|+.||.......+.    ..
T Consensus       141 ~~~~l~d~gl~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~  217 (284)
T cd06620         141 GQIKLCDFGVSGELINSI---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMG  217 (284)
T ss_pred             CcEEEccCCcccchhhhc---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhH
Confidence            999999999987542221   22356899999999988888999999999999999999999999754221110    01


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                      ....... ........+    ........+.+++.+||+.||++||+++|++++.-
T Consensus       218 ~~~~~~~-~~~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~  268 (284)
T cd06620         218 ILDLLQQ-IVQEPPPRL----PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP  268 (284)
T ss_pred             HHHHHHH-HhhccCCCC----CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence            1111111 111111110    01124567889999999999999999999998743

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.95  E-value=1.4e-27  Score=252.10  Aligned_cols=197  Identities=21%  Similarity=0.247  Sum_probs=153.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..+++.++||||+++++|.+++...+ .+++..+..++.|++.||+|||++   +++|+||||+||+++.++
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~  138 (305)
T cd05609          63 VVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMG  138 (305)
T ss_pred             eeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCC
Confidence            7888888999999999999999999999997654 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCC--------------ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcC
Q 038002          551 RAKISDFGLAKLLMPNQT--------------GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEV  616 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~  616 (702)
                      .+||+|||+++.......              .......++..|+|||.+.+..++.++|+||||+++|||++|..||..
T Consensus       139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~  218 (305)
T cd05609         139 HIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG  218 (305)
T ss_pred             CEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            999999998864211100              011124578899999999888899999999999999999999999964


Q ss_pred             CCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          617 NVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      ...  .+      ............   +......+..+.+++.+||+.||++||++.++.+.|+.
T Consensus       219 ~~~--~~------~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         219 DTP--EE------LFGQVISDDIEW---PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             CCH--HH------HHHHHHhcccCC---CCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            311  11      111111111111   11112345678999999999999999998777777765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.95  E-value=1.5e-27  Score=248.37  Aligned_cols=191  Identities=22%  Similarity=0.249  Sum_probs=152.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+.+...+..++..++||||+++++|.+++.... .+++.++..++.|+++||+|||+.   +|+|+||||+||+++.++
T Consensus        59 i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~  134 (278)
T cd05606          59 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHG  134 (278)
T ss_pred             EeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCC
Confidence            6777888899999999999999999999987654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++..+....   .....|+..|+|||.+.+. .++.++||||+|+++|||++|+.||...........    
T Consensus       135 ~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~----  207 (278)
T cd05606         135 HVRISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI----  207 (278)
T ss_pred             CEEEccCcCccccCccC---CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH----
Confidence            99999999987553222   1234689999999988644 688999999999999999999999975422211110    


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  679 (702)
                       ......      .....+...+..+.+++.+||+.+|.+||     +++++++.
T Consensus       208 -~~~~~~------~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~  255 (278)
T cd05606         208 -DRMTLT------MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH  255 (278)
T ss_pred             -HHHhhc------cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence             000000      11122333467889999999999999999     99999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=99.95  E-value=8.7e-29  Score=218.88  Aligned_cols=104  Identities=36%  Similarity=0.558  Sum_probs=76.5

Q ss_pred             CCeEEEEecCCCCCCC--CCceEEEccCCcEEEEcCCCCeeeee-ccccCC-cceeEEEecCcCEEEeecCCceEeeecC
Q 038002           73 NITVVWTANRDEQPMP--SNATLALTMDGKLILKTEESKEKPIA-DLVFDE-PASFASMLDSGNFVLYSNRSGIIWESFS  148 (702)
Q Consensus        73 ~~~~vW~An~~~~~~~--~~~~l~~~~~g~L~l~~~~~~~~w~~-~~~~~~-~~~~~~l~d~Gnlvl~~~~~~~~WqSFd  148 (702)
                      ++||||+|||+.|+..  ..++|.|+.||||+|++.+++.+|++ ++.... ...+|+|+|+|||||++..+.+||||||
T Consensus         1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~   80 (114)
T PF01453_consen    1 PRTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFD   80 (114)
T ss_dssp             ---------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTT
T ss_pred             CcccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecC
Confidence            4799999999999865  34899999999999999998899999 443333 5899999999999999999999999999


Q ss_pred             CCcccccCCCccCCC------CeEEeeccCCCCc
Q 038002          149 TPTDTILGGQSLENG------EHLLSSVTETNSS  176 (702)
Q Consensus       149 ~PTDTlLpgq~l~~~------~~L~S~~s~~dps  176 (702)
                      |||||+||||+|+.+      ..++||++.+|||
T Consensus        81 ~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   81 YPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             SSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             CCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            999999999999862      4599999999996

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.95  E-value=1.8e-27  Score=249.13  Aligned_cols=200  Identities=19%  Similarity=0.261  Sum_probs=148.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++.+++.+++..++||||+++ +|.+++......+++..+..++.|+++||+|||+.   +|+|+||||+||+++.++
T Consensus        65 i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~  140 (291)
T cd07844          65 IVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERG  140 (291)
T ss_pred             eeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCC
Confidence            77788889999999999999985 99999887665788999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++........ ......++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||.......+....   
T Consensus       141 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~---  216 (291)
T cd07844         141 ELKLADFGLARAKSVPSK-TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHK---  216 (291)
T ss_pred             CEEECccccccccCCCCc-cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHH---
Confidence            999999999875432211 1122346788999998765 56789999999999999999999999654211111110   


Q ss_pred             HHHhhhc---ccc--------------ccccccc----c-CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 VYNCFVA---GEF--------------NKLVEEE----V-DKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 ~~~~~~~---~~~--------------~~~~~~~----~-~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .......   ..+              .......    . .......+.+++.+||+.+|++||+++|+++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         217 IFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             HHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence            0000000   000              0000000    0 0111267789999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.95  E-value=2.3e-27  Score=245.80  Aligned_cols=197  Identities=24%  Similarity=0.299  Sum_probs=153.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++...+..++||||+++++|.+++.... .+++..+..++.||+.||.|||++   +++|+||+|+||+++.++
T Consensus        70 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~  145 (272)
T cd06629          70 IVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADG  145 (272)
T ss_pred             cceEEEEeccCCceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCC
Confidence            6677788888999999999999999999997764 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCc-eeeceeccccccCcccccCCC--CCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGL--ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      .++|+|||++......... ......++..|+|||.+....  ++.++|+||||+++||+++|..||......   ..  
T Consensus       146 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~~--  220 (272)
T cd06629         146 ICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI---AA--  220 (272)
T ss_pred             eEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH---HH--
Confidence            9999999999765322111 123345788999999886654  789999999999999999999999532110   00  


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                        .... ........+...........+.+++.+||+.+|++||+++++++.
T Consensus       221 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         221 --MFKL-GNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             --HHHh-hccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence              0110 111111111222333456788999999999999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.95  E-value=1.1e-27  Score=249.49  Aligned_cols=198  Identities=24%  Similarity=0.339  Sum_probs=153.7

Q ss_pred             eeeEEEEE-ecCCeeEEEEecCCCCCHHHHhhcCC-------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCC
Q 038002          471 ISSLLVYK-HRSSKKLLVYEFMSKGSLADLLFNLE-------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR  542 (702)
Q Consensus       471 i~~l~~~~-~~~~~~~lV~e~~~~gsL~~~l~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~  542 (702)
                      |++++++. ..+...++++||+++++|.+++....       ..+++.++..++.|++.||+|||++   +++|+||||+
T Consensus        70 i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~  146 (280)
T cd05043          70 ILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAAR  146 (280)
T ss_pred             CCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHh
Confidence            66666654 44688999999999999999987542       3478999999999999999999999   9999999999


Q ss_pred             cEEEeCCCcEEEecccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCC
Q 038002          543 NILIDDSWRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVST  620 (702)
Q Consensus       543 NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~  620 (702)
                      ||++++++.+||+|||+++.+....... .....++..|+|||.+.+..++.++||||||+++||+++ |+.||..... 
T Consensus       147 nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-  225 (280)
T cd05043         147 NCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP-  225 (280)
T ss_pred             hEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH-
Confidence            9999999999999999998654332211 122345678999999988889999999999999999999 9999964311 


Q ss_pred             cchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          621 ADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                         ......    ...+ ..    .......++.+.+++.+||+.||++|||+.++++.|+.+.
T Consensus       226 ---~~~~~~----~~~~-~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~  277 (280)
T cd05043         226 ---FEMAAY----LKDG-YR----LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH  277 (280)
T ss_pred             ---HHHHHH----HHcC-CC----CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence               111111    1111 10    0111223567899999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.95  E-value=2.7e-27  Score=247.16  Aligned_cols=194  Identities=21%  Similarity=0.225  Sum_probs=147.2

Q ss_pred             eeeEEEEE-----ecCCeeEEEEecCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCC
Q 038002          471 ISSLLVYK-----HRSSKKLLVYEFMSKGSLADLLFN---LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR  542 (702)
Q Consensus       471 i~~l~~~~-----~~~~~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~  542 (702)
                      |++++.++     ++++..++||||+++++|.+++..   ....+++..+..++.|+++||.|||++   +|+||||||+
T Consensus        77 i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~  153 (286)
T cd06638          77 VVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGN  153 (286)
T ss_pred             eeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHH
Confidence            66676655     356789999999999999998753   233578889999999999999999999   9999999999


Q ss_pred             cEEEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccC-----CCCCccccccchhHhHHHhhhCCcCCcCC
Q 038002          543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-----GLITVKSDVYSFGVVLLEIICCRSNFEVN  617 (702)
Q Consensus       543 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~  617 (702)
                      ||+++.++.+||+|||++........ ......|++.|+|||++..     ..++.++|||||||++|||++|+.||...
T Consensus       154 nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~  232 (286)
T cd06638         154 NILLTTEGGVKLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADL  232 (286)
T ss_pred             hEEECCCCCEEEccCCceeecccCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCC
Confidence            99999999999999999987643221 2233468899999998753     45788999999999999999999999643


Q ss_pred             CCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          618 VSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ....   ....     ...........   +......+.+++.+||+.||++||+++||++.
T Consensus       233 ~~~~---~~~~-----~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         233 HPMR---ALFK-----IPRNPPPTLHQ---PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             chhH---HHhh-----ccccCCCcccC---CCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            1111   0000     00010001111   11234578899999999999999999999874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.95  E-value=5.8e-28  Score=251.11  Aligned_cols=190  Identities=23%  Similarity=0.311  Sum_probs=152.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..++..++||||+++++|.+++..  ..+++..+..++.|+++||+|||++   +++|+||+|+||++++++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~  138 (277)
T cd06642          64 ITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQG  138 (277)
T ss_pred             cHhhhcccccCCceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCC
Confidence            66777788889999999999999999999864  3588999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||++........ ......++..|+|||.+.+..++.++|+||||+++|||++|+.|+.......    ..   
T Consensus       139 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----~~---  210 (277)
T cd06642         139 DVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR----VL---  210 (277)
T ss_pred             CEEEccccccccccCcch-hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh----HH---
Confidence            999999999976543221 1223457889999999988889999999999999999999999986431110    00   


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                       .......     .+.........+.+++.+||+.+|++||++.++++.
T Consensus       211 -~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         211 -FLIPKNS-----PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             -hhhhcCC-----CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence             0011111     112223445678899999999999999999999984

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1e-27  Score=249.58  Aligned_cols=194  Identities=21%  Similarity=0.275  Sum_probs=153.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..+...++||||+++++|.+++.+....+++.++..++.|++.||+|||++   +|+|+||||+||+++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~  140 (280)
T cd06611          64 IVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDG  140 (280)
T ss_pred             eeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCC
Confidence            88888899999999999999999999999987666789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCccccc-----CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN-----SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                      .++|+|||++....... .......+++.|+|||.+.     ...++.++|+||||+++|||++|+.||......   ..
T Consensus       141 ~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~---~~  216 (280)
T cd06611         141 DVKLADFGVSAKNKSTL-QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM---RV  216 (280)
T ss_pred             CEEEccCccchhhcccc-cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH---HH
Confidence            99999999887543222 1223456889999999874     345678999999999999999999999643111   11


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .     ...........   ..+......+.+++.+||+.+|++||+++++++.
T Consensus       217 ~-----~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         217 L-----LKILKSEPPTL---DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             H-----HHHhcCCCCCc---CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            1     11111111111   1122345678899999999999999999999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.95  E-value=1.3e-27  Score=255.07  Aligned_cols=213  Identities=21%  Similarity=0.261  Sum_probs=175.0

Q ss_pred             cceEEEeEE--EEEeeeeh--hhhH---hh----------------------------eeeEEEEEecCCe--eEEEEec
Q 038002          448 KRKLLTVLA--GCLGSITF--LCFL---IA----------------------------ISSLLVYKHRSSK--KLLVYEF  490 (702)
Q Consensus       448 ~~~l~~g~~--v~~~~~~~--~~~a---vk----------------------------i~~l~~~~~~~~~--~~lV~e~  490 (702)
                      ...||+|+|  ||+|....  ..||   ||                            |++++.++.+...  +.+|+|.
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL  124 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL  124 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence            357899998  99988765  3333   11                            9999988876555  8899999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC-CCcEEEecccceeecCCCCCc
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD-SWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      +..|+|..|+++.+ +++.+.+..|++||++||.|||++ .+.|||||||-+||+|+. .|.|||+|+|+|.......  
T Consensus       125 ~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~--  200 (632)
T KOG0584|consen  125 FTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH--  200 (632)
T ss_pred             ccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccc--
Confidence            99999999999887 899999999999999999999997 569999999999999965 5789999999999864333  


Q ss_pred             eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCH
Q 038002          570 IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK  649 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (702)
                       ...+.|||.|||||... ..|++.+||||||+.++||+|+..||.....       ...++.....|.-+..+..--  
T Consensus       201 -aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n-------~AQIYKKV~SGiKP~sl~kV~--  269 (632)
T KOG0584|consen  201 -AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN-------PAQIYKKVTSGIKPAALSKVK--  269 (632)
T ss_pred             -cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC-------HHHHHHHHHcCCCHHHhhccC--
Confidence             34478999999999877 7899999999999999999999999975522       233555666665554444422  


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          650 ITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                        ..++.++|.+||.. ..+|||+.|+|+
T Consensus       270 --dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  270 --DPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             --CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence              34688899999999 999999999997

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.5e-27  Score=247.44  Aligned_cols=189  Identities=25%  Similarity=0.300  Sum_probs=153.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++...+.++...++|+||+++++|.+++...  .+++..+..++.|++.||+|||++   +++|+||+|+||++++++
T Consensus        61 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~  135 (274)
T cd06609          61 ITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEG  135 (274)
T ss_pred             eeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCC
Confidence            788888889999999999999999999999764  689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||++........ ......+++.|+|||.+.+..++.++||||||+++|+|++|..||......  .  .    
T Consensus       136 ~~~l~d~g~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--~--~----  206 (274)
T cd06609         136 DVKLADFGVSGQLTSTMS-KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--R--V----  206 (274)
T ss_pred             CEEEcccccceeeccccc-ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--H--H----
Confidence            999999999987654321 223456788999999998888999999999999999999999999643211  0  0    


Q ss_pred             HHhhhccccccccccccCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKI-TLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ........     .+..... ....+.+++.+||+.+|++||+++++++
T Consensus       207 ~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         207 LFLIPKNN-----PPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             HHHhhhcC-----CCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            01111111     1111111 4567889999999999999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.95  E-value=3.7e-27  Score=272.67  Aligned_cols=193  Identities=21%  Similarity=0.229  Sum_probs=145.3

Q ss_pred             eeeEEEEEe--cCCeeEEEEecCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcCC----CCeEecCCCC
Q 038002          471 ISSLLVYKH--RSSKKLLVYEFMSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDECE----VQIIHCDIKL  541 (702)
Q Consensus       471 i~~l~~~~~--~~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~----~~ivH~dlkp  541 (702)
                      |++++.++.  ....+||||||+++++|.++|...   ...+++..++.|+.||+.||+|||+...    .+|+|+||||
T Consensus        74 IVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKP  153 (1021)
T PTZ00266         74 IVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKP  153 (1021)
T ss_pred             cCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcH
Confidence            777777663  456799999999999999999753   2368999999999999999999998510    1599999999


Q ss_pred             CcEEEeC-----------------CCcEEEecccceeecCCCCCceeeceeccccccCcccccC--CCCCccccccchhH
Q 038002          542 RNILIDD-----------------SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS--GLITVKSDVYSFGV  602 (702)
Q Consensus       542 ~NIll~~-----------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGv  602 (702)
                      +||||+.                 ...+||+|||++..+....  ......||+.|+|||++.+  ..++.++|||||||
T Consensus       154 eNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~  231 (1021)
T PTZ00266        154 QNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGC  231 (1021)
T ss_pred             HHeEeecCccccccccccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHH
Confidence            9999964                 3358999999998653322  1234568999999998854  45889999999999


Q ss_pred             hHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       603 il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      |+|||++|..||......  .    . ....+....  .+    .....+..+.+||..||+.+|.+||++.|++.
T Consensus       232 ILYELLTGk~PF~~~~~~--~----q-li~~lk~~p--~l----pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        232 IIYELCSGKTPFHKANNF--S----Q-LISELKRGP--DL----PIKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             HHHHHHHCCCCCCcCCcH--H----H-HHHHHhcCC--CC----CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            999999999999643111  0    1 111111110  00    01123567889999999999999999999984

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.95  E-value=2.2e-27  Score=246.98  Aligned_cols=198  Identities=26%  Similarity=0.331  Sum_probs=156.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+.. ...++||||+++|+|.+++......+++..+..++.||+.||+|||++   +|+|+||||+||+++.++
T Consensus        71 i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~  146 (279)
T cd05057          71 VVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQ  146 (279)
T ss_pred             cceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCC
Confidence            6777777766 789999999999999999988766789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCcee-eceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIV-AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      .+||+|||.++.......... ....++..|+|||.+....++.++|+||||+++||+++ |+.||.....  .+  .  
T Consensus       147 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~--~--  220 (279)
T cd05057         147 HVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--VE--I--  220 (279)
T ss_pred             eEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--HH--H--
Confidence            999999999987643322111 11223567999999888889999999999999999998 9999965411  11  1  


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                        ......+..     ...+......+.+++.+||..||++||++.++++.|+.+..
T Consensus       221 --~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         221 --PDLLEKGER-----LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             --HHHHhCCCC-----CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence              111111111     01112234567889999999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.95  E-value=1.8e-27  Score=248.05  Aligned_cols=192  Identities=23%  Similarity=0.258  Sum_probs=146.6

Q ss_pred             eeeEEEEEe------cCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCc
Q 038002          471 ISSLLVYKH------RSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN  543 (702)
Q Consensus       471 i~~l~~~~~------~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~N  543 (702)
                      |+++++++.      .++..++||||+++|+|.+++.... ..+++..+..++.||+.||+|||++   +|+|+||||+|
T Consensus        75 i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~n  151 (282)
T cd06636          75 IATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQN  151 (282)
T ss_pred             EEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHH
Confidence            666666653      3578899999999999999997643 3478888899999999999999999   99999999999


Q ss_pred             EEEeCCCcEEEecccceeecCCCCCceeeceeccccccCccccc-----CCCCCccccccchhHhHHHhhhCCcCCcCCC
Q 038002          544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN-----SGLITVKSDVYSFGVVLLEIICCRSNFEVNV  618 (702)
Q Consensus       544 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~  618 (702)
                      |++++++.++|+|||++........ ......+++.|+|||.+.     ...++.++|+||||+++|||++|..||....
T Consensus       152 ili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~  230 (282)
T cd06636         152 VLLTENAEVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH  230 (282)
T ss_pred             EEECCCCCEEEeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC
Confidence            9999999999999999876532211 223456889999999875     3467889999999999999999999996432


Q ss_pred             CCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          619 STADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .... .      .. ........    ......+..+.+++.+||+.||.+||++.||++
T Consensus       231 ~~~~-~------~~-~~~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         231 PMRA-L------FL-IPRNPPPK----LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             HHhh-h------hh-HhhCCCCC----CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            1110 0      00 00000001    112234567899999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.95  E-value=2.4e-27  Score=243.21  Aligned_cols=192  Identities=21%  Similarity=0.297  Sum_probs=154.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++...++.+++.++||||+++++|.+++.... ..+++.++..++.|++.||+|||++   +++|+||+|+||+++.+
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~  137 (256)
T cd08218          61 IVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKD  137 (256)
T ss_pred             eeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCC
Confidence            7888899999999999999999999999987643 3578899999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      +.++|+|||++........ ......+++.|+|||++.+...+.++|+||||+++++|++|..||.....   .    ..
T Consensus       138 ~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---~----~~  209 (256)
T cd08218         138 GTIKLGDFGIARVLNSTVE-LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM---K----NL  209 (256)
T ss_pred             CCEEEeeccceeecCcchh-hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH---H----HH
Confidence            9999999999986643221 12234578899999999888899999999999999999999999964311   0    11


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      . .....+...     ..+......+.+++.+||+.+|++||++++|++.
T Consensus       210 ~-~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         210 V-LKIIRGSYP-----PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             H-HHHhcCCCC-----CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            1 111111111     1223446678999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.95  E-value=3.8e-27  Score=242.93  Aligned_cols=196  Identities=24%  Similarity=0.319  Sum_probs=154.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE--TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |++++..+..++..++|||++++++|.+++....  ..+++..+..++.|++.||+|||++   +|+|+||+|+||++++
T Consensus        61 i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~  137 (267)
T cd06610          61 VVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGE  137 (267)
T ss_pred             EEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcC
Confidence            6778888889999999999999999999997642  3588999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCc---eeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          549 SWRAKISDFGLAKLLMPNQTG---IVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      ++.++|+|||++.........   ......++..|+|||.+... .++.++|+||||++++||++|+.||.......   
T Consensus       138 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~---  214 (267)
T cd06610         138 DGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK---  214 (267)
T ss_pred             CCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh---
Confidence            999999999998766443322   12334688899999988766 78999999999999999999999996432111   


Q ss_pred             hhHHHHHHhhhccccccccccc-cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCFVAGEFNKLVEEE-VDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ....     ....... ..... .....++.+.+++.+||+.||++||++++|++
T Consensus       215 ~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         215 VLML-----TLQNDPP-SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             hHHH-----HhcCCCC-CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            1111     1111111 11111 11245678899999999999999999999986

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.95  E-value=2.7e-27  Score=242.79  Aligned_cols=190  Identities=26%  Similarity=0.348  Sum_probs=152.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++.+++..++..++||||+++++|.+++.+.. .+++..+..++.|++.||+|||+.   +|+|+||+|+||+++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~  139 (258)
T cd06632          64 IVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNG  139 (258)
T ss_pred             chheeeeEecCCeEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence            6778888889999999999999999999997654 588999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCC-CCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL-ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++.......  ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||.....   ...    
T Consensus       140 ~~kl~d~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~---~~~----  210 (258)
T cd06632         140 VVKLADFGMAKQVVEFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG---VAA----  210 (258)
T ss_pred             CEEEccCccceeccccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH---HHH----
Confidence            99999999988754332  223455788999999887666 89999999999999999999999965421   000    


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..........     +..+......+.+++.+||+.+|++||+++++++
T Consensus       211 ~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         211 VFKIGRSKEL-----PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HHHHHhcccC-----CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            1110010111     1122334567888999999999999999999985

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.95  E-value=3.8e-27  Score=243.42  Aligned_cols=191  Identities=23%  Similarity=0.285  Sum_probs=146.7

Q ss_pred             eeeEEEEEec--CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHR--SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |++++..+.+  +...+++|||+++++|.+++.... .+++.....++.|++.||+|||+.   +|+|+||||+||+++.
T Consensus        66 i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~  141 (266)
T cd06651          66 IVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDS  141 (266)
T ss_pred             eeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECC
Confidence            6777766654  478899999999999999997654 588899999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCC--CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          549 SWRAKISDFGLAKLLMPNQ--TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                      ++.+||+|||++.......  ........++..|+|||.+.+..++.++||||||+++|||++|+.||......   .. 
T Consensus       142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~---~~-  217 (266)
T cd06651         142 AGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM---AA-  217 (266)
T ss_pred             CCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH---HH-
Confidence            9999999999987653211  11122345788999999998888999999999999999999999999643111   00 


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                         ........     ..+..+....+.+.+++ +||..+|++||+++||++
T Consensus       218 ---~~~~~~~~-----~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         218 ---IFKIATQP-----TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             ---HHHHhcCC-----CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence               11111111     11222333445566666 688899999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.95  E-value=1.1e-27  Score=255.56  Aligned_cols=188  Identities=23%  Similarity=0.291  Sum_probs=158.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++.+.+.+..+|+||||+.+|.+.+++.+.+ +..+.++..++.|+.+|++|||++   .|+|||||++|||++.+.
T Consensus       117 Ivkl~~v~~t~~~lylV~eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~m  192 (596)
T KOG0586|consen  117 IVKLFSVIETEATLYLVMEYASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENM  192 (596)
T ss_pred             eeeeeeeeeecceeEEEEEeccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhccccccc
Confidence            8999999999999999999999999999999887 677799999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCC-CccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLI-TVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      ++||+|||++..+..  .......+|++.|.|||++.+..| .+.+|+||+|+++|.|+.|..||+...-..-       
T Consensus       193 nikIaDfgfS~~~~~--~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L-------  263 (596)
T KOG0586|consen  193 NIKIADFGFSTFFDY--GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL-------  263 (596)
T ss_pred             ceeeeccccceeecc--cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc-------
Confidence            999999999998853  334667899999999999988765 5899999999999999999999986521110       


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       .+....+.+      .++.-.+.++.++|+++|..+|.+|++++++.+
T Consensus       264 -r~rvl~gk~------rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  264 -RPRVLRGKY------RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             -cchheeeee------cccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence             011111111      223334567888999999999999999999876

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.94  E-value=2.6e-27  Score=243.56  Aligned_cols=192  Identities=23%  Similarity=0.317  Sum_probs=153.2

Q ss_pred             eeeEEEEEe--cCCeeEEEEecCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhh-----hcCCCCeEecCCC
Q 038002          471 ISSLLVYKH--RSSKKLLVYEFMSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLH-----DECEVQIIHCDIK  540 (702)
Q Consensus       471 i~~l~~~~~--~~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH-----~~~~~~ivH~dlk  540 (702)
                      |+++++++.  .+...+++|||+++++|.+++...   ...+++.+++.++.||+.||+|||     +.   +++|+|||
T Consensus        61 i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~  137 (265)
T cd08217          61 IVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLK  137 (265)
T ss_pred             cceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCC
Confidence            667766553  456789999999999999999754   346889999999999999999999     77   99999999


Q ss_pred             CCcEEEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCC
Q 038002          541 LRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVST  620 (702)
Q Consensus       541 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~  620 (702)
                      |+||+++.++.+||+|||++........ ......+++.|+|||.+.+..++.++|+||||+++++|++|..||....  
T Consensus       138 p~nili~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--  214 (265)
T cd08217         138 PANIFLDANNNVKLGDFGLAKILGHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--  214 (265)
T ss_pred             HHHEEEecCCCEEEecccccccccCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--
Confidence            9999999999999999999987644332 1233468899999999988889999999999999999999999997542  


Q ss_pred             cchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          621 ADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                        ....    ......+..     +..+......+.+++.+||+.+|++||++++|++.
T Consensus       215 --~~~~----~~~~~~~~~-----~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         215 --QLQL----ASKIKEGKF-----RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             --HHHH----HHHHhcCCC-----CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence              1111    111111111     12334456788999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.94  E-value=4.8e-27  Score=246.00  Aligned_cols=202  Identities=19%  Similarity=0.233  Sum_probs=147.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++.+++..++..++||||+. ++|.+++......+.+.++..++.|++.||+|||+.   +|+|+||||+||+++.++
T Consensus        65 i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~  140 (291)
T cd07870          65 IVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLG  140 (291)
T ss_pred             EeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCC
Confidence            7788888999999999999996 678777765555678888999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++........ ......+++.|+|||.+.+ ..++.++||||||+++|||++|..||.......+.. ...+
T Consensus       141 ~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~-~~~~  218 (291)
T cd07870         141 ELKLADFGLARAKSIPSQ-TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQL-EKIW  218 (291)
T ss_pred             cEEEeccccccccCCCCC-CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHH-HHHH
Confidence            999999999875432221 1223456889999998865 457889999999999999999999997542211110 0000


Q ss_pred             HHH---------------hhhcccccccccccc-----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 VYN---------------CFVAGEFNKLVEEEV-----DKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 ~~~---------------~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ...               ...............     .......+.+++.+|++.||++|||++|++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         219 TVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             HHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            000               000000000000000     0012457788999999999999999999874

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=2.6e-27  Score=247.35  Aligned_cols=193  Identities=26%  Similarity=0.379  Sum_probs=150.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEe
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL--ETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~  547 (702)
                      |+++++.+..++..++||||+++++|..++...  ...+++..+..++.|++.||.|||+ .   +|+|+||||+||+++
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---~i~H~dl~p~nil~~  137 (286)
T cd06622          61 IVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH---NIIHRDVKPTNVLVN  137 (286)
T ss_pred             HHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC---CEeeCCCCHHHEEEC
Confidence            666777788899999999999999999998764  2368999999999999999999996 5   899999999999999


Q ss_pred             CCCcEEEecccceeecCCCCCceeeceeccccccCcccccCC------CCCccccccchhHhHHHhhhCCcCCcCCCCCc
Q 038002          548 DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG------LITVKSDVYSFGVVLLEIICCRSNFEVNVSTA  621 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~  621 (702)
                      .++.+||+|||++.......   .....+++.|+|||.+.+.      .++.++|+|||||++|+|++|..||.......
T Consensus       138 ~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  214 (286)
T cd06622         138 GNGQVKLCDFGVSGNLVASL---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN  214 (286)
T ss_pred             CCCCEEEeecCCcccccCCc---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh
Confidence            99999999999987653222   2234578899999987543      35789999999999999999999996431111


Q ss_pred             chhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          622 DEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                         .. . .......+.     ....+......+.+++.+||+.+|++||++++++..
T Consensus       215 ---~~-~-~~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         215 ---IF-A-QLSAIVDGD-----PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             ---HH-H-HHHHHhhcC-----CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence               00 0 001111111     112334467788999999999999999999999873

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.94  E-value=3.7e-27  Score=242.74  Aligned_cols=194  Identities=25%  Similarity=0.335  Sum_probs=151.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+.+.+..++|+||+++++|.+++.... .+++..+..++.|++.||+|||+.   +|+|+||+|+||++++++
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~  136 (264)
T cd06626          61 LVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNG  136 (264)
T ss_pred             hhheeeeEecCCEEEEEEecCCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence            6778888889999999999999999999997654 578899999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCcee---eceeccccccCcccccCCC---CCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          551 RAKISDFGLAKLLMPNQTGIV---AGVRGSRGYMAPEWQNSGL---ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      .+||+|||++...........   ....++..|+|||.+....   ++.++||||||++++++++|+.||......   .
T Consensus       137 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~---~  213 (264)
T cd06626         137 VIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE---F  213 (264)
T ss_pred             CEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch---H
Confidence            999999999987644332211   1355788999999987665   889999999999999999999999643211   1


Q ss_pred             hhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..   ... ...... ..+..  .......+.+++.+||+.+|++||++++++.
T Consensus       214 ~~---~~~-~~~~~~-~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         214 QI---MFH-VGAGHK-PPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HH---HHH-HhcCCC-CCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            00   000 001110 00111  1123567789999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.94  E-value=5.6e-27  Score=241.97  Aligned_cols=191  Identities=21%  Similarity=0.241  Sum_probs=148.5

Q ss_pred             eeeEEEEEec--CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHR--SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |+++++.+.+  +...++||||+++++|.+++.... .+++..+..++.|++.||+|||++   +|+|+||||+||+++.
T Consensus        66 i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~  141 (265)
T cd06652          66 IVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDS  141 (265)
T ss_pred             eeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecC
Confidence            6677776655  457889999999999999997654 578888999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCC--ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          549 SWRAKISDFGLAKLLMPNQT--GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                      ++.++|+|||++........  .......++..|+|||.+.+..++.++||||||+++|||++|+.||.....   ....
T Consensus       142 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~  218 (265)
T cd06652         142 VGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA---MAAI  218 (265)
T ss_pred             CCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch---HHHH
Confidence            99999999999876532111  112234578899999998888889999999999999999999999964311   1111


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                          ......     ...+..+......+.+++.+|+. +|++||+++||++
T Consensus       219 ----~~~~~~-----~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         219 ----FKIATQ-----PTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             ----HHHhcC-----CCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence                111111     11122344566778889999985 8999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.94  E-value=4.9e-28  Score=233.26  Aligned_cols=194  Identities=22%  Similarity=0.331  Sum_probs=154.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++.+++|-.+...++.||.|. .-++.+++.....+++..+-++...++.||.||.+++  +|+|||+||+|||+|+.|
T Consensus       153 IV~c~GyFi~n~dV~IcMelMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~G  229 (391)
T KOG0983|consen  153 IVQCFGYFITNTDVFICMELMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERG  229 (391)
T ss_pred             eeeeeeEEeeCchHHHHHHHHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCC
Confidence            8999999999999999999994 3677777777667888888899999999999998874  999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCccccc---CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN---SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      ++||+|||.+-.+.....  .+...|-+.|||||.+.   ...|+.++||||||+.++||.||+.||......-  ..+.
T Consensus       230 niKlCDFGIsGrlvdSkA--htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF--e~lt  305 (391)
T KOG0983|consen  230 NIKLCDFGISGRLVDSKA--HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF--EVLT  305 (391)
T ss_pred             CEEeecccccceeecccc--cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH--HHHH
Confidence            999999999987654433  34456889999999874   3478899999999999999999999998652221  1111


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .     +.. +.+..++..  ...+..+++++..||++|+.+||...++++.
T Consensus       306 k-----vln-~ePP~L~~~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  306 K-----VLN-EEPPLLPGH--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             H-----HHh-cCCCCCCcc--cCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence            1     111 112222221  2267889999999999999999999998863

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.94  E-value=9.6e-28  Score=250.42  Aligned_cols=203  Identities=21%  Similarity=0.285  Sum_probs=149.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++..++..++||||+++++|..+..... .+++.++..++.||+.||+|||+.   +|+|+||+|+||++++++
T Consensus        62 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~  137 (286)
T cd07846          62 LVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSG  137 (286)
T ss_pred             hhhHHHhcccCCeEEEEEecCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCC
Confidence            5666777888999999999999999988776543 589999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .++|+|||++........ ......++..|+|||++.+ ..++.++||||||+++|||++|+.||...............
T Consensus       138 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~  216 (286)
T cd07846         138 VVKLCDFGFARTLAAPGE-VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKC  216 (286)
T ss_pred             cEEEEeeeeeeeccCCcc-ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH
Confidence            999999999987643332 2233457889999998765 45788999999999999999999999644211100000000


Q ss_pred             HH-------Hhhhcccc-cccccc---------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 VY-------NCFVAGEF-NKLVEE---------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 ~~-------~~~~~~~~-~~~~~~---------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..       .......+ .....+         ...+.....+.+++.+||+.+|++||+++++++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         217 LGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             hCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            00       00000000 000000         012234677999999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=3.1e-27  Score=249.77  Aligned_cols=177  Identities=20%  Similarity=0.238  Sum_probs=147.4

Q ss_pred             cceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          448 KRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       448 ~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      .+.||.|+|  |+++....  ..+|+|                              |++|+..|++.+.+|+||||++|
T Consensus       634 ik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPG  713 (1034)
T KOG0608|consen  634 IKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPG  713 (1034)
T ss_pred             EeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCC
Confidence            467899999  77776543  556665                              99999999999999999999999


Q ss_pred             CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCC--------
Q 038002          494 GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP--------  565 (702)
Q Consensus       494 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~--------  565 (702)
                      |++..+|-+.+ -+++..++-++.++..|+++.|+.   |+|||||||+|||||.+|++||.|||++.-+.-        
T Consensus       714 GDmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq  789 (1034)
T KOG0608|consen  714 GDMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ  789 (1034)
T ss_pred             ccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceecccccccc
Confidence            99999998765 688888888999999999999999   999999999999999999999999999964310        


Q ss_pred             CCC---------------------------------ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCc
Q 038002          566 NQT---------------------------------GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRS  612 (702)
Q Consensus       566 ~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~  612 (702)
                      +..                                 -......||+.|+|||++....++..+|.||.|||||||+.|+.
T Consensus       790 ~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~  869 (1034)
T KOG0608|consen  790 EGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQP  869 (1034)
T ss_pred             CCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCC
Confidence            000                                 00012569999999999999999999999999999999999999


Q ss_pred             CCcCCCCCcchhhhHH
Q 038002          613 NFEVNVSTADEVLLST  628 (702)
Q Consensus       613 Pf~~~~~~~~~~~~~~  628 (702)
                      ||-.....+.+..+..
T Consensus       870 pf~~~tp~~tq~kv~n  885 (1034)
T KOG0608|consen  870 PFLADTPGETQYKVIN  885 (1034)
T ss_pred             CccCCCCCcceeeeee
Confidence            9976655544444433

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.94  E-value=2.1e-27  Score=250.42  Aligned_cols=198  Identities=23%  Similarity=0.324  Sum_probs=153.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+.. ...++|+||+++|+|.+++......+++..+..++.|++.||+|||++   +|+|+||||+||+++.++
T Consensus        71 iv~~~~~~~~-~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~  146 (303)
T cd05110          71 LVRLLGVCLS-PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPN  146 (303)
T ss_pred             cccEEEEEcC-CCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCC
Confidence            6777777654 457899999999999999987665688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          551 RAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      .+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||.....    .....
T Consensus       147 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~----~~~~~  222 (303)
T cd05110         147 HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT----REIPD  222 (303)
T ss_pred             ceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHH
Confidence            9999999999876433221 1122335678999999988889999999999999999997 8999864311    11111


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ..    ..+...     ..+......+.+++.+||..+|++||+++++++.|+.+.+
T Consensus       223 ~~----~~~~~~-----~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~  270 (303)
T cd05110         223 LL----EKGERL-----PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR  270 (303)
T ss_pred             HH----HCCCCC-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            11    111110     1112234578889999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.94  E-value=1.8e-27  Score=245.28  Aligned_cols=195  Identities=28%  Similarity=0.392  Sum_probs=153.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++..+..++..++|+||+++++|.+++......+++..+..++.|++.||+|||+ .   +++|+||||+||+++.+
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~  137 (265)
T cd06605          61 IVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSR  137 (265)
T ss_pred             hhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCC
Confidence            5666777888899999999999999999998765578899999999999999999999 8   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      +.++|+|||.+.........   ...++..|+|||.+.+..++.++||||||+++|+|++|..||..........  ...
T Consensus       138 ~~~~l~d~g~~~~~~~~~~~---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~--~~~  212 (265)
T cd06605         138 GQIKLCDFGVSGQLVNSLAK---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGI--FEL  212 (265)
T ss_pred             CCEEEeecccchhhHHHHhh---cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccH--HHH
Confidence            99999999998765322211   2567889999999988899999999999999999999999996542211111  111


Q ss_pred             HHHhhhccccccccccccCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKI-TLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                       .........     +..... ....+.++|.+||+.||++|||+.+++..
T Consensus       213 -~~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         213 -LQYIVNEPP-----PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             -HHHHhcCCC-----CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence             111111111     111111 56678999999999999999999999853

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.94  E-value=5.1e-27  Score=242.41  Aligned_cols=195  Identities=26%  Similarity=0.373  Sum_probs=154.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+.+++..++||||+++++|.+++.+.. .+++..+..++.|++.||+|||++   +++|+||+|+||+++.++
T Consensus        65 iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~  140 (268)
T cd06630          65 IIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTG  140 (268)
T ss_pred             eehhhceeccCCeEEEEEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCC
Confidence            7788888999999999999999999999997654 688999999999999999999999   999999999999998776


Q ss_pred             -cEEEecccceeecCCCCC---ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          551 -RAKISDFGLAKLLMPNQT---GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       551 -~~kl~Dfg~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                       .+||+|||.+........   .......++..|+|||.+.+..++.++|+||+|+++++|++|+.||.........   
T Consensus       141 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~---  217 (268)
T cd06630         141 QRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL---  217 (268)
T ss_pred             CEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH---
Confidence             599999999987643321   1122345788999999998888899999999999999999999999643211111   


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       ........     ....+..+......+.+++.+||+.+|++||++.++++
T Consensus       218 -~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         218 -ALIFKIAS-----ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             -HHHHHHhc-----cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence             11111000     11122344556778999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.94  E-value=4.2e-27  Score=241.18  Aligned_cols=191  Identities=23%  Similarity=0.354  Sum_probs=151.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++..+..++..++||||+++++|.+++.... ..+++..+..++.|++.+|+|||++   +++|+||+|+||+++.+
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~  137 (256)
T cd08220          61 IIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKH  137 (256)
T ss_pred             hhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC
Confidence            5667778888999999999999999999997653 3478999999999999999999999   99999999999999755


Q ss_pred             -CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          550 -WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 -~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                       +.+||+|||++........  .....++..|+|||.+.+..++.++||||||+++|+|++|+.||......   ...  
T Consensus       138 ~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~---~~~--  210 (256)
T cd08220         138 KMVVKIGDFGISKILSSKSK--AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP---ALV--  210 (256)
T ss_pred             CCEEEEccCCCceecCCCcc--ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH---HHH--
Confidence             4689999999987643322  22345788999999998888899999999999999999999999654211   111  


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                         .........     ..+......+.+++.+||+.+|++|||++|+++.
T Consensus       211 ---~~~~~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         211 ---LKIMSGTFA-----PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             ---HHHHhcCCC-----CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence               111111111     1222346678899999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.94  E-value=4e-27  Score=245.08  Aligned_cols=201  Identities=21%  Similarity=0.215  Sum_probs=148.9

Q ss_pred             eeeEEEEEecC--CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHRS--SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |+++++.+.++  +..++||||++ ++|.+++......+++.++..++.|++.||+|||+.   +++|+||+|+||+++.
T Consensus        60 i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~  135 (282)
T cd07831          60 ILRLIEVLFDRKTGRLALVFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD  135 (282)
T ss_pred             ccceEEEEecCCCCcEEEEEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC
Confidence            66777777777  89999999997 588888876555789999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCceeeceeccccccCccccc-CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN-SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                       +.+||+|||++........  .....++..|+|||.+. +..++.++|||||||++|||++|..||......+......
T Consensus       136 -~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~  212 (282)
T cd07831         136 -DILKLADFGSCRGIYSKPP--YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIH  212 (282)
T ss_pred             -CCeEEEecccccccccCCC--cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHH
Confidence             9999999999986643322  12345788999999764 4567899999999999999999999996542111000000


Q ss_pred             HH-------HHHhhhcccccc-----cccc---ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          628 TW-------VYNCFVAGEFNK-----LVEE---EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       628 ~~-------~~~~~~~~~~~~-----~~~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..       ............     ....   ......+..+.+++.+||+.+|++||+++++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         213 DVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             HHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            00       000000000000     0000   112245688999999999999999999999986

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=5.7e-27  Score=243.48  Aligned_cols=190  Identities=22%  Similarity=0.292  Sum_probs=151.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      ++++++.+..+...++||||+++++|.+++...  .+++..+..++.|++.||+|||+.   +|+|+||+|+||+++.++
T Consensus        64 vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~  138 (277)
T cd06917          64 ITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTG  138 (277)
T ss_pred             eeeEeeeeeeCCEEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCC
Confidence            677788888999999999999999999998653  688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .++|+|||++........ ......|+..|+|||.+.+ ..++.++|+||||+++|+|++|..||........       
T Consensus       139 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-------  210 (277)
T cd06917         139 NVKLCDFGVAALLNQNSS-KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-------  210 (277)
T ss_pred             CEEEccCCceeecCCCcc-ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-------
Confidence            999999999987644332 2234568889999998765 4578999999999999999999999964321100       


Q ss_pred             HHHhhhccccccccccccCH-HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDK-ITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      . ........     +.... .....+.+++.+||+.||++||++.++++.
T Consensus       211 ~-~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         211 M-MLIPKSKP-----PRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             h-hccccCCC-----CCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence            0 00000001     11111 145678899999999999999999999873

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.94  E-value=2.5e-27  Score=248.55  Aligned_cols=192  Identities=22%  Similarity=0.299  Sum_probs=150.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..++..++||||+++++|.+++...  .+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        81 ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~  155 (292)
T cd06658          81 VVDMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDG  155 (292)
T ss_pred             HHHHHHheecCCeEEEEEeCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCC
Confidence            555666777889999999999999999988543  588999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||++........ ......++..|+|||.+.+..++.++|+||||+++|||++|..||......   ....   
T Consensus       156 ~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~---~~~~---  228 (292)
T cd06658         156 RIKLSDFGFCAQVSKEVP-KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL---QAMR---  228 (292)
T ss_pred             CEEEccCcchhhcccccc-cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH---
Confidence            999999999876533222 223356889999999998888999999999999999999999999643110   0000   


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                        .... .....+.  ........+.+++.+||+.||++|||++++++.
T Consensus       229 --~~~~-~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         229 --RIRD-NLPPRVK--DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             --HHHh-cCCCccc--cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence              0000 1111111  112345578889999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=1e-26  Score=243.13  Aligned_cols=198  Identities=28%  Similarity=0.335  Sum_probs=150.8

Q ss_pred             eeeEEEEEec--CCeeEEEEecCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEE
Q 038002          471 ISSLLVYKHR--SSKKLLVYEFMSKGSLADLLFN---LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL  545 (702)
Q Consensus       471 i~~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIl  545 (702)
                      |+++++++..  .+..++||||+++++|.+++..   ....+++..+..++.||+.||+|||+.   +++|+||+|+||+
T Consensus        61 iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil  137 (287)
T cd06621          61 IVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNIL  137 (287)
T ss_pred             eeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence            7777776643  4578999999999999998753   233578899999999999999999999   9999999999999


Q ss_pred             EeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCc-chh
Q 038002          546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTA-DEV  624 (702)
Q Consensus       546 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~~  624 (702)
                      ++.++.++|+|||++........   ....++..|+|||.+.+..++.++||||||+++|+|++|..||....... ...
T Consensus       138 ~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~  214 (287)
T cd06621         138 LTRKGQVKLCDFGVSGELVNSLA---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPI  214 (287)
T ss_pred             EecCCeEEEeecccccccccccc---ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChH
Confidence            99999999999999875532221   23457889999999988899999999999999999999999997552211 111


Q ss_pred             hhHHHHHHhhhcccccccccc-ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCFVAGEFNKLVEE-EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ....+.    .......+... .......+.+.+++.+||+.+|++|||+.|+++
T Consensus       215 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         215 ELLSYI----VNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             HHHHHH----hcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            111111    11111111111 111234678899999999999999999999987

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=4.9e-28  Score=238.04  Aligned_cols=177  Identities=21%  Similarity=0.270  Sum_probs=145.5

Q ss_pred             EEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEe
Q 038002          476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS  555 (702)
Q Consensus       476 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~  555 (702)
                      -.|+..+++++||||..||.|.-+|.+.+ .+++....-+..+|+.||.|||++   +||.||||.+|.|+|.+|++||+
T Consensus       235 YsFQt~drlCFVMeyanGGeLf~HLsrer-~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKit  310 (516)
T KOG0690|consen  235 YSFQTQDRLCFVMEYANGGELFFHLSRER-VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKIT  310 (516)
T ss_pred             hhhccCceEEEEEEEccCceEeeehhhhh-cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEee
Confidence            46788999999999999999999987654 688888888999999999999999   99999999999999999999999


Q ss_pred             cccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhh
Q 038002          556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFV  635 (702)
Q Consensus       556 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~  635 (702)
                      |||+++.--. .......++|||.|+|||++....|..++|.|.+||++|||++|+.||......   .     +.+.+.
T Consensus       311 DFGLCKE~I~-~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~---k-----LFeLIl  381 (516)
T KOG0690|consen  311 DFGLCKEEIK-YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE---K-----LFELIL  381 (516)
T ss_pred             ecccchhccc-ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh---H-----HHHHHH
Confidence            9999985322 223456799999999999999999999999999999999999999999754221   1     111111


Q ss_pred             ccccccccccccCHHHHHHHHHHHHHcccCCCCCCC
Q 038002          636 AGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP  671 (702)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP  671 (702)
                      ..++      ..+...+++...|+...|.+||.+|.
T Consensus       382 ~ed~------kFPr~ls~eAktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  382 MEDL------KFPRTLSPEAKTLLSGLLKKDPKKRL  411 (516)
T ss_pred             hhhc------cCCccCCHHHHHHHHHHhhcChHhhc
Confidence            1111      23445566778888889999999994

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.94  E-value=5.4e-27  Score=245.06  Aligned_cols=191  Identities=20%  Similarity=0.267  Sum_probs=152.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++..+++.++|+||+++++|.+++..  .++++.++..++.|++.||+|||++   +|+||||+|+||+++.++
T Consensus        78 vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~  152 (285)
T cd06648          78 IVEMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDG  152 (285)
T ss_pred             hheEEEEEEcCCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCC
Confidence            77888888899999999999999999999976  3688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||.+........ ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.....    ....   
T Consensus       153 ~~~l~d~g~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~----~~~~---  224 (285)
T cd06648         153 RVKLSDFGFCAQVSKEVP-RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP----LQAM---  224 (285)
T ss_pred             cEEEcccccchhhccCCc-ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH----HHHH---
Confidence            999999998875533222 22334588999999999888899999999999999999999999964311    1000   


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       ........ ....  ........+.+++.+||+.+|++||+++++++
T Consensus       225 -~~~~~~~~-~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         225 -KRIRDNLP-PKLK--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             -HHHHhcCC-CCCc--ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence             11111110 0110  11224567899999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.94  E-value=1e-26  Score=239.41  Aligned_cols=194  Identities=27%  Similarity=0.349  Sum_probs=156.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++..+..++..++||||+++++|.+++.... .+++..+..++.|+++||+|||+ .   +++|+||+|+||+++.+
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~  136 (264)
T cd06623          61 VVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVG-KIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSK  136 (264)
T ss_pred             eeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCC
Confidence            7888888999999999999999999999997653 68999999999999999999999 9   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      +.++|+|||++......... .....++..|+|||.+.+..++.++|+||||+++|+|++|+.||........ ....  
T Consensus       137 ~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~-~~~~--  212 (264)
T cd06623         137 GEVKIADFGISKVLENTLDQ-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSF-FELM--  212 (264)
T ss_pred             CCEEEccCccceecccCCCc-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCH-HHHH--
Confidence            99999999999876433322 2245678899999999888899999999999999999999999965422111 1111  


Q ss_pred             HHHhhhccccccccccccCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKI-TLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                        ........     ...+.. .+..+.+++.+||+.+|++||+++++++.
T Consensus       213 --~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         213 --QAICDGPP-----PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             --HHHhcCCC-----CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence              11111111     112222 56789999999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.94  E-value=1.2e-27  Score=252.69  Aligned_cols=220  Identities=23%  Similarity=0.256  Sum_probs=183.2

Q ss_pred             ccceEEEeEE--EEEeeeeh------hhhHhh----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          447 DKRKLLTVLA--GCLGSITF------LCFLIA----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~~------~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      -.+.||+|-|  ||.|....      ..||||                            |++|++.+.+ ...+||||.
T Consensus       393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL  471 (974)
T KOG4257|consen  393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMEL  471 (974)
T ss_pred             HHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEec
Confidence            3578999988  99998764      467887                            8888888754 567999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      ++.|.|.++|+..+..++......++.||+.||+|||+.   .++||||...|||+.....+||+|||+++.+..+....
T Consensus       472 ~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYk  548 (974)
T KOG4257|consen  472 APLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYK  548 (974)
T ss_pred             ccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhccccchhh
Confidence            999999999999888899999999999999999999999   99999999999999999999999999999886665544


Q ss_pred             eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCH
Q 038002          571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK  649 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (702)
                      .....-...|||||.+.-+.++.++|||-|||.+||++. |..||..-...+-        ...+..++     ....++
T Consensus       549 aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV--------I~~iEnGe-----RlP~P~  615 (974)
T KOG4257|consen  549 ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV--------IGHIENGE-----RLPCPP  615 (974)
T ss_pred             ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce--------EEEecCCC-----CCCCCC
Confidence            444445678999999999999999999999999999986 9999976522211        11111222     224566


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          650 ITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      ..+..+..++.+||.+||.+||++.|+...|+.+
T Consensus       616 nCPp~LYslmskcWayeP~kRPrftei~~~lsdv  649 (974)
T KOG4257|consen  616 NCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDV  649 (974)
T ss_pred             CCChHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence            7788999999999999999999999998887654

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.6e-27  Score=235.12  Aligned_cols=190  Identities=18%  Similarity=0.304  Sum_probs=157.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      ++-|...|++++++++|.||++||+|.-++.+++ +++++.+.-+..+|+.||.|||++   |||.||||.+|+|+|..|
T Consensus       313 lvglhscfqtesrlffvieyv~ggdlmfhmqrqr-klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeg  388 (593)
T KOG0695|consen  313 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEG  388 (593)
T ss_pred             EEehhhhhcccceEEEEEEEecCcceeeehhhhh-cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCC
Confidence            5666788999999999999999999998887766 788998999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      ++||.|+|+++.-.. ......+++|||.|+|||++++..|...+|.|+|||+++||+.|+.||+.......+..-..+.
T Consensus       389 hikltdygmcke~l~-~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedyl  467 (593)
T KOG0695|consen  389 HIKLTDYGMCKEGLG-PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYL  467 (593)
T ss_pred             ceeecccchhhcCCC-CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHH
Confidence            999999999986432 2334567899999999999999999999999999999999999999998764444444444555


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP  671 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP  671 (702)
                      .+.+.+..+.      ++...+-+...+++.-|.+||.+|.
T Consensus       468 fqvilekqir------iprslsvkas~vlkgflnkdp~erl  502 (593)
T KOG0695|consen  468 FQVILEKQIR------IPRSLSVKASHVLKGFLNKDPKERL  502 (593)
T ss_pred             HHHHhhhccc------ccceeehhhHHHHHHhhcCCcHHhc
Confidence            5555544432      2233344566777788999999993

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.94  E-value=8.2e-27  Score=244.24  Aligned_cols=186  Identities=23%  Similarity=0.231  Sum_probs=152.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+.+++..++||||+++++|.+++.... .+++..+..++.|++.||+|||+.   +|+|+||+|+||+++.++
T Consensus        63 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~  138 (290)
T cd05580          63 LVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDG  138 (290)
T ss_pred             ccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCC
Confidence            7888889999999999999999999999997764 789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++......    .....+++.|+|||.+.+...+.++||||||+++|+|++|+.||....   ...     .
T Consensus       139 ~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~-----~  206 (290)
T cd05580         139 YIKITDFGFAKRVKGR----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN---PIQ-----I  206 (290)
T ss_pred             CEEEeeCCCccccCCC----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC---HHH-----H
Confidence            9999999999876433    233457899999999888888999999999999999999999996442   110     1


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~  678 (702)
                      ......+..      ..+......+.+++.+||+.||.+||     +++|+++
T Consensus       207 ~~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         207 YEKILEGKV------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             HHHHhcCCc------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence            111111111      12223356888999999999999999     7777764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=4.8e-27  Score=243.18  Aligned_cols=193  Identities=25%  Similarity=0.288  Sum_probs=148.3

Q ss_pred             eeeEEEEEec------CCeeEEEEecCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCC
Q 038002          471 ISSLLVYKHR------SSKKLLVYEFMSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKL  541 (702)
Q Consensus       471 i~~l~~~~~~------~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp  541 (702)
                      |+++++.+..      +...++||||+++++|.+++...   ...+++..+..++.|++.||+|||++   +++|+||+|
T Consensus        65 i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p  141 (275)
T cd06608          65 IATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKG  141 (275)
T ss_pred             hheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCH
Confidence            6677777654      44589999999999999998653   34688999999999999999999999   999999999


Q ss_pred             CcEEEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccC-----CCCCccccccchhHhHHHhhhCCcCCcC
Q 038002          542 RNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-----GLITVKSDVYSFGVVLLEIICCRSNFEV  616 (702)
Q Consensus       542 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~  616 (702)
                      +||+++.++.+||+|||++....... .......++..|+|||.+..     ..++.++||||||+++|+|++|..||..
T Consensus       142 ~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~  220 (275)
T cd06608         142 QNILLTKNAEVKLVDFGVSAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCD  220 (275)
T ss_pred             HHEEEccCCeEEECCCccceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccc
Confidence            99999999999999999987653322 22234568889999998743     3467899999999999999999999963


Q ss_pred             CCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          617 NVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ....   ....     ..........   .......+.+.+++.+||+.||++|||++++++
T Consensus       221 ~~~~---~~~~-----~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         221 MHPM---RALF-----KIPRNPPPTL---KSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             cchH---HHHH-----HhhccCCCCC---CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            3111   1111     1111111111   112235678899999999999999999999986

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.94  E-value=2.4e-27  Score=249.20  Aligned_cols=192  Identities=19%  Similarity=0.266  Sum_probs=151.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..++..++||||+++++|.+++..  ..+++..+..++.|++.||+|||++   +++|+||||+||+++.++
T Consensus        80 i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~  154 (297)
T cd06659          80 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDG  154 (297)
T ss_pred             hhhhhhheeeCCeEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCC
Confidence            56677778889999999999999999998854  3588999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||++..+..... ......++..|+|||++.+..++.++||||||+++|||++|+.||......  + .. .  
T Consensus       155 ~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~-~~-~--  227 (297)
T cd06659         155 RVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--Q-AM-K--  227 (297)
T ss_pred             cEEEeechhHhhcccccc-cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--H-HH-H--
Confidence            999999999875533221 223356889999999998888999999999999999999999999643111  0 00 0  


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                        ....... ..  ..........+.+++.+||+.+|++||+++++++.
T Consensus       228 --~~~~~~~-~~--~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         228 --RLRDSPP-PK--LKNAHKISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             --HHhccCC-CC--ccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence              0111000 00  01112234568889999999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.94  E-value=8e-27  Score=244.36  Aligned_cols=194  Identities=21%  Similarity=0.210  Sum_probs=146.7

Q ss_pred             eeeEEEEEecC-----CeeEEEEecCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCC
Q 038002          471 ISSLLVYKHRS-----SKKLLVYEFMSKGSLADLLFN---LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR  542 (702)
Q Consensus       471 i~~l~~~~~~~-----~~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~  542 (702)
                      +++++.++...     +..++||||+++++|.+++..   ....+++..+..++.|++.||+|||+.   +|+|+||||+
T Consensus        81 i~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~  157 (291)
T cd06639          81 VVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGN  157 (291)
T ss_pred             eEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHH
Confidence            66666665532     468999999999999998863   234688999999999999999999999   9999999999


Q ss_pred             cEEEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCC-----CCCccccccchhHhHHHhhhCCcCCcCC
Q 038002          543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-----LITVKSDVYSFGVVLLEIICCRSNFEVN  617 (702)
Q Consensus       543 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlGvil~elltG~~Pf~~~  617 (702)
                      ||+++.++.+||+|||++........ ......++..|+|||.+...     .++.++||||||+++|||++|+.||...
T Consensus       158 nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~  236 (291)
T cd06639         158 NILLTTEGGVKLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDM  236 (291)
T ss_pred             HEEEcCCCCEEEeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCC
Confidence            99999999999999999886533221 12234578899999987543     3688999999999999999999999643


Q ss_pred             CCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          618 VSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ...   ....     ............   .......+.+++.+||+.+|++||+++|+++.
T Consensus       237 ~~~---~~~~-----~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         237 HPV---KTLF-----KIPRNPPPTLLH---PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             cHH---HHHH-----HHhcCCCCCCCc---ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            111   1111     011111111111   12344578999999999999999999999863

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.94  E-value=6.7e-29  Score=241.66  Aligned_cols=218  Identities=21%  Similarity=0.197  Sum_probs=174.2

Q ss_pred             ccceEEEeEE--EEEeeeeh--hhhHhh-------------------------eeeEEEEEecCCeeEEEEecCCCCCHH
Q 038002          447 DKRKLLTVLA--GCLGSITF--LCFLIA-------------------------ISSLLVYKHRSSKKLLVYEFMSKGSLA  497 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------i~~l~~~~~~~~~~~lV~e~~~~gsL~  497 (702)
                      ...++|+|+.  |+++..+.  ..+|+|                         |+++++.+-....+++|||||--|++.
T Consensus        37 i~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiS  116 (502)
T KOG0574|consen   37 IVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSIS  116 (502)
T ss_pred             HHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHH
Confidence            3457777776  66555443  445554                         888888888889999999999999999


Q ss_pred             HHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeeceecc
Q 038002          498 DLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS  577 (702)
Q Consensus       498 ~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt  577 (702)
                      ++++..+..+++.++..+++..++||+|||..   .-||||||..|||++-+|.+||+|||.|-.+..... ....+.||
T Consensus       117 DI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA-KRNTVIGT  192 (502)
T KOG0574|consen  117 DIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA-KRNTVIGT  192 (502)
T ss_pred             HHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHH-hhCccccC
Confidence            99998887899999999999999999999999   899999999999999999999999999976633221 23457899


Q ss_pred             ccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHH
Q 038002          578 RGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVK  657 (702)
Q Consensus       578 ~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  657 (702)
                      +.|||||++..-.|+.++||||||+...||.-|++||...........         ....-+.-+  .-+...+.++-+
T Consensus       193 PFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM---------IPT~PPPTF--~KPE~WS~~F~D  261 (502)
T KOG0574|consen  193 PFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM---------IPTKPPPTF--KKPEEWSSEFND  261 (502)
T ss_pred             cccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe---------ccCCCCCCC--CChHhhhhHHHH
Confidence            999999999999999999999999999999999999964322111000         000111111  225567889999


Q ss_pred             HHHHcccCCCCCCCCHHHHHHH
Q 038002          658 TGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       658 li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ++++||-++|++|-|+-++++.
T Consensus       262 Fi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  262 FIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             HHHHHhcCCHHHHHHHHHHhhh
Confidence            9999999999999999888763

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.94  E-value=1.7e-27  Score=255.60  Aligned_cols=188  Identities=19%  Similarity=0.239  Sum_probs=137.5

Q ss_pred             CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          482 SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       482 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      ...|+++|++ +++|.+++...  .+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++.
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~  166 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLAR  166 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccce
Confidence            4579999998 78999888543  589999999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH-------HHh
Q 038002          562 LLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV-------YNC  633 (702)
Q Consensus       562 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~-------~~~  633 (702)
                      .....    .....|++.|+|||++.+ ..++.++|||||||++|+|++|+.||................       ...
T Consensus       167 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (343)
T cd07878         167 QADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKK  242 (343)
T ss_pred             ecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            65332    233468999999998866 578899999999999999999999996432111000000000       000


Q ss_pred             hhccc-------ccccccc---ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          634 FVAGE-------FNKLVEE---EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       634 ~~~~~-------~~~~~~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .....       +......   .......+.+.+++.+||+.||++|||++|+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         243 ISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             cchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00000       0000000   0001123457899999999999999999999964

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=8e-27  Score=262.20  Aligned_cols=205  Identities=18%  Similarity=0.242  Sum_probs=147.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC----CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE----TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI  546 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  546 (702)
                      |++++++++.++..|+|+|++. ++|.+++....    ......++..++.||+.||+|||++   +|+||||||+|||+
T Consensus       225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl  300 (501)
T PHA03210        225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFL  300 (501)
T ss_pred             cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence            8889999999999999999995 57777765432    1244667788999999999999999   99999999999999


Q ss_pred             eCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          547 DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       547 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                      +.++.+||+|||++..+............||+.|+|||++.+..++.++|||||||++|||++|..++...........+
T Consensus       301 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~  380 (501)
T PHA03210        301 NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQL  380 (501)
T ss_pred             CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHH
Confidence            99999999999999876544333333467999999999999889999999999999999999988654322111111111


Q ss_pred             HHHHHHh-hhcccccc-------cccc--------cc-----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          627 STWVYNC-FVAGEFNK-------LVEE--------EV-----DKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       627 ~~~~~~~-~~~~~~~~-------~~~~--------~~-----~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ....... ....++..       .+..        ..     .......+.+++.+||+.||++|||+.|+++.
T Consensus       381 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        381 LKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             HHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            1111000 00000000       0000        00     00123456778999999999999999999874

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=4.4e-28  Score=275.27  Aligned_cols=214  Identities=22%  Similarity=0.231  Sum_probs=170.2

Q ss_pred             ceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEecCCCCC
Q 038002          449 RKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEFMSKGS  495 (702)
Q Consensus       449 ~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~~~~gs  495 (702)
                      .++|.|-|  ||-+.-..  ...|||                             ++++++...+.+..+|.||||++|+
T Consensus      1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~Gs 1320 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGS 1320 (1509)
T ss_pred             cccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCc
Confidence            45777777  88776544  667777                             7888888888999999999999999


Q ss_pred             HHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC---Cceee
Q 038002          496 LADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ---TGIVA  572 (702)
Q Consensus       496 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~---~~~~~  572 (702)
                      |.+++...+ ..++.....+..|++.|++|||++   |||||||||+||+++.+|.+|++|||.|..+....   .....
T Consensus      1321 La~ll~~gr-i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~ 1396 (1509)
T KOG4645|consen 1321 LASLLEHGR-IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQ 1396 (1509)
T ss_pred             HHHHHHhcc-hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHH
Confidence            999997654 456666667888999999999999   99999999999999999999999999999875543   12334


Q ss_pred             ceeccccccCcccccC---CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHH-hhhccccccccccccC
Q 038002          573 GVRGSRGYMAPEWQNS---GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYN-CFVAGEFNKLVEEEVD  648 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  648 (702)
                      ...||+.|||||++.+   +....++|||||||++.||+||++||...+..        |... +...+.     .+.++
T Consensus      1397 ~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne--------~aIMy~V~~gh-----~Pq~P 1463 (1509)
T KOG4645|consen 1397 SMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE--------WAIMYHVAAGH-----KPQIP 1463 (1509)
T ss_pred             hhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch--------hHHHhHHhccC-----CCCCc
Confidence            6789999999998854   34567899999999999999999999654221        1111 112222     22445


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ...+.+-.+++.+||+.||++|-++.|+++.
T Consensus      1464 ~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1464 ERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             hhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence            5578888999999999999999998888764

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.94  E-value=8.4e-27  Score=237.58  Aligned_cols=192  Identities=26%  Similarity=0.361  Sum_probs=154.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |.++...+..++..++++||+++++|.+++......+++.++..++.|++.||++||+.   +++|+||+|+||++++++
T Consensus        59 i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~  135 (253)
T cd05122          59 IVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDG  135 (253)
T ss_pred             EeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCC
Confidence            77888888899999999999999999999987655789999999999999999999998   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||.+........  .....++..|+|||.+....++.++|+||||+++|+|++|+.||......  ...     
T Consensus       136 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~-----  206 (253)
T cd05122         136 EVKLIDFGLSAQLSDTKA--RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--KAL-----  206 (253)
T ss_pred             eEEEeecccccccccccc--ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--HHH-----
Confidence            999999999987654332  33456888999999998888899999999999999999999999643111  000     


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .. ...........   .......+.+++.+||+.||++|||++++++
T Consensus       207 ~~-~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         207 FK-IATNGPPGLRN---PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HH-HHhcCCCCcCc---ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            00 01111111111   1112567899999999999999999999985

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.94  E-value=9.5e-27  Score=242.04  Aligned_cols=190  Identities=23%  Similarity=0.318  Sum_probs=153.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..++..++||||+++++|.+++...  .+++..+..++.|++.++++||+.   +++|+||+|+||+++.++
T Consensus        64 iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~  138 (277)
T cd06641          64 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHG  138 (277)
T ss_pred             EeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCC
Confidence            788888899999999999999999999998643  588999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||++........ ......++..|+|||.+.+..++.++|+||||+++|+|++|..||.....    ....   
T Consensus       139 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~---  210 (277)
T cd06641         139 EVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP----MKVL---  210 (277)
T ss_pred             CEEEeecccceecccchh-hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch----HHHH---
Confidence            999999999876543221 12234578899999999888889999999999999999999999964311    1110   


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                       .......     .+.........+.+++.+||+.+|++||+++++++.
T Consensus       211 -~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         211 -FLIPKNN-----PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             -HHHhcCC-----CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence             1111111     111223345678899999999999999999999984

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=4.4e-28  Score=254.46  Aligned_cols=214  Identities=24%  Similarity=0.260  Sum_probs=174.0

Q ss_pred             ccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEec
Q 038002          445 VNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      +..-+.||-|+|  ||-+....  ..||||                              ++.+-++|-.+...+|||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            344578999988  88887654  788887                              66677888999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      |- ||-.|++.-.+.++.+-++..|..+.+.||+|||++   +.||||||..|||+.+.|.|||+|||.|.....     
T Consensus       108 Cl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-----  178 (948)
T KOG0577|consen  108 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAP-----  178 (948)
T ss_pred             Hh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCc-----
Confidence            95 589999988877899999999999999999999999   999999999999999999999999999987533     


Q ss_pred             eeceeccccccCccccc---CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          571 VAGVRGSRGYMAPEWQN---SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                      ...++|||.|||||++.   .+.|+-++|||||||+..||.-.++|+.....       ....+ ++...+-+-+    -
T Consensus       179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA-------MSALY-HIAQNesPtL----q  246 (948)
T KOG0577|consen  179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALY-HIAQNESPTL----Q  246 (948)
T ss_pred             hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-------HHHHH-HHHhcCCCCC----C
Confidence            34578999999999774   47899999999999999999999999754311       11111 1111111111    1


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ..+.++.+++++..||++-|.+|||.+++++.
T Consensus       247 s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  247 SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH  278 (948)
T ss_pred             CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence            45678889999999999999999999998863

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.94  E-value=6.2e-27  Score=244.08  Aligned_cols=203  Identities=21%  Similarity=0.222  Sum_probs=150.7

Q ss_pred             eeeEEEEEecC--CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHRS--SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      ++++++.+...  +..++||||+++ +|.+++......+++.++..++.||++||+|||+.   +++|+||+|+||++++
T Consensus        60 i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~  135 (287)
T cd07840          60 IVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINN  135 (287)
T ss_pred             eeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcC
Confidence            66777777777  899999999975 99999877655789999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      ++.+||+|||++...............++..|+|||.+.+ ..++.++||||||+++|||++|+.||.............
T Consensus       136 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~  215 (287)
T cd07840         136 DGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIF  215 (287)
T ss_pred             CCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            9999999999998765443222333456788999997654 467899999999999999999999997542211000000


Q ss_pred             HHHHHhhhcccc------------------ccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          628 TWVYNCFVAGEF------------------NKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       628 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ... .......+                  ...+........+..+.+++.+||+.+|++||+++++++
T Consensus       216 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         216 ELC-GSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             HHh-CCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            000 00000000                  000000111112668899999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.94  E-value=9.8e-27  Score=242.40  Aligned_cols=192  Identities=23%  Similarity=0.322  Sum_probs=147.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  547 (702)
                      |++++.++..++..++||||++ ++|.+++...   ...+++..+..++.||+.||+|||+++  +++||||||+||+++
T Consensus        62 iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~  138 (283)
T cd06617          62 TVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLIN  138 (283)
T ss_pred             eeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEEC
Confidence            7888888889999999999996 6888887542   235889999999999999999999852  899999999999999


Q ss_pred             CCCcEEEecccceeecCCCCCceeeceeccccccCcccccC----CCCCccccccchhHhHHHhhhCCcCCcCCCCCcch
Q 038002          548 DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS----GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE  623 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~  623 (702)
                      .++.+||+|||++........  .....++..|+|||.+.+    ..++.++|+||||+++|+|++|+.||.......+.
T Consensus       139 ~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~  216 (283)
T cd06617         139 RNGQVKLCDFGISGYLVDSVA--KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQ  216 (283)
T ss_pred             CCCCEEEeecccccccccccc--cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHH
Confidence            999999999999886532221  223457889999998754    45688999999999999999999999643111111


Q ss_pred             hhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          624 VLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                        ..    . ..........    ....+..+.+++.+||+.+|++||+++++++
T Consensus       217 --~~----~-~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         217 --LK----Q-VVEEPSPQLP----AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             --HH----H-HHhcCCCCCC----ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence              10    0 1111111110    1124567899999999999999999999987

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.94  E-value=7.7e-27  Score=242.71  Aligned_cols=193  Identities=26%  Similarity=0.310  Sum_probs=152.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++...++..+..|+||||+++++|.+++.... ..+++.++..++.|++.||.|||+.   +++|+||+|+||+++.+
T Consensus        55 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~  131 (277)
T cd05577          55 IVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDH  131 (277)
T ss_pred             EeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCC
Confidence            6778888889999999999999999999997654 3588999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      +.+||+|||.+.......  ......++..|+|||.+.+..++.++||||||+++|+|++|+.||...........+   
T Consensus       132 ~~~~l~dfg~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---  206 (277)
T cd05577         132 GNVRISDLGLAVELKGGK--KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEEL---  206 (277)
T ss_pred             CCEEEccCcchhhhccCC--ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHH---
Confidence            999999999987653321  122345778999999988888999999999999999999999999654221111111   


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVIL  678 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~  678 (702)
                       ......      .....+......+.+++.+||+.||++||     ++.++++
T Consensus       207 -~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         207 -KRRTLE------MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             -Hhcccc------ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence             110000      01122334467889999999999999999     6666764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.94  E-value=7.5e-27  Score=244.19  Aligned_cols=198  Identities=22%  Similarity=0.264  Sum_probs=153.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++...+..+...++||||+++++|.+++.... .+++.++..++.|++++|+|||+.   +++|+||+|+||+++.++
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~  142 (288)
T cd05583          67 LVTLHYAFQTDTKLHLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEG  142 (288)
T ss_pred             hhhhheeeecCCEEEEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCC
Confidence            4556677888999999999999999999987653 688899999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCC--CCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL--ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      .++|+|||++...............++..|+|||.+.+..  .+.++|+||||+++|||++|..||...........+  
T Consensus       143 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~--  220 (288)
T cd05583         143 HVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEI--  220 (288)
T ss_pred             CEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHH--
Confidence            9999999998876443332233456888999999886654  788999999999999999999999643211111111  


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                       . ......      ....+......+.+++.+||+.||++|||+.++.+.|+-
T Consensus       221 -~-~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         221 -S-RRILKS------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             -H-HHHHcc------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence             1 111111      111223345678899999999999999999888877765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.94  E-value=1e-26  Score=239.59  Aligned_cols=192  Identities=23%  Similarity=0.243  Sum_probs=153.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+.++...++||||+++++|.+++.+.. .+++.++..++.||+.||+|||++   +++|+||+|+||+++.++
T Consensus        55 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~  130 (262)
T cd05572          55 IVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRG-LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNG  130 (262)
T ss_pred             EeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCC
Confidence            7788888899999999999999999999997654 588999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||++.......  ......++..|+|||.+....++.++|+||||+++|+|++|..||.......  ..    .
T Consensus       131 ~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~----~  202 (262)
T cd05572         131 YVKLVDFGFAKKLKSGQ--KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP--ME----I  202 (262)
T ss_pred             CEEEeeCCcccccCccc--ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH--HH----H
Confidence            99999999998764432  1223457889999999888888999999999999999999999997552211  11    1


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPS-----MKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~  678 (702)
                      ......+..    ....+......+.+++.+||+.+|++||+     ++|+++
T Consensus       203 ~~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         203 YNDILKGNG----KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             HHHHhccCC----CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence            111111000    11122233678999999999999999999     677765

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.94  E-value=7.7e-27  Score=244.72  Aligned_cols=203  Identities=20%  Similarity=0.252  Sum_probs=149.7

Q ss_pred             eeeEEEEEecC--CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHRS--SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |+++..++...  +..|+||||+++ +|.+++......+++.++..++.||+.||+|||+.   +++|+||||+||+++.
T Consensus        66 i~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~  141 (293)
T cd07843          66 IVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNN  141 (293)
T ss_pred             EEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECC
Confidence            67777776666  899999999975 99999877665689999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      ++.+||+|||++........ ......+++.|+|||.+.+. .++.++|+||||+++|||++|..||...........+.
T Consensus       142 ~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~  220 (293)
T cd07843         142 RGILKICDFGLAREYGSPLK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIF  220 (293)
T ss_pred             CCcEEEeecCceeeccCCcc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            99999999999987654322 12234568899999987654 46899999999999999999999997542211100000


Q ss_pred             HH-------HHHhh------hccccccc----cccccCHH-HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          628 TW-------VYNCF------VAGEFNKL----VEEEVDKI-TLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       628 ~~-------~~~~~------~~~~~~~~----~~~~~~~~-~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..       .+...      ........    +....+.. ..+.+.+++.+||+.||++|||++|+++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         221 KLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             HHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence            00       00000      00000000    00111111 3667889999999999999999999985

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.94  E-value=8.3e-27  Score=244.56  Aligned_cols=202  Identities=18%  Similarity=0.182  Sum_probs=144.6

Q ss_pred             eeeEEEEEecCCe-----eEEEEecCCCCCHHHHhhcCC----CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCC
Q 038002          471 ISSLLVYKHRSSK-----KLLVYEFMSKGSLADLLFNLE----TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKL  541 (702)
Q Consensus       471 i~~l~~~~~~~~~-----~~lV~e~~~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp  541 (702)
                      |++++..+...+.     .|+||||+++ +|.+++....    ..+++..+..++.||+.||+|||++   +|+||||||
T Consensus        63 i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~  138 (295)
T cd07837          63 IVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKP  138 (295)
T ss_pred             ccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCh
Confidence            5566666665555     8999999986 8988886532    2478999999999999999999999   999999999


Q ss_pred             CcEEEeC-CCcEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCC
Q 038002          542 RNILIDD-SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVS  619 (702)
Q Consensus       542 ~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~  619 (702)
                      +||+++. ++.+||+|||++..+..... ......+++.|+|||++.+ ..++.++||||||+++|+|++|..||.....
T Consensus       139 ~nil~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~  217 (295)
T cd07837         139 QNLLVDKQKGLLKIADLGLGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE  217 (295)
T ss_pred             HHEEEecCCCeEEEeecccceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH
Confidence            9999998 88999999999886533221 1122346788999998754 4678999999999999999999999965421


Q ss_pred             CcchhhhHHHHHHhhhccc------------cccccc---cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          620 TADEVLLSTWVYNCFVAGE------------FNKLVE---EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       620 ~~~~~~~~~~~~~~~~~~~------------~~~~~~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ........... .......            ......   ....+.....+.++|.+||+.||++||+++|++.
T Consensus       218 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         218 LQQLLHIFKLL-GTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             HHHHHHHHHHh-CCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            11110000000 0000000            000000   0111235677899999999999999999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.94  E-value=1e-26  Score=250.66  Aligned_cols=200  Identities=22%  Similarity=0.210  Sum_probs=145.5

Q ss_pred             eeeEEEEEec------CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKHR------SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~~------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |++++..+..      ....|+||||+.+ +|.+.+..   .++..++..++.|++.||+|||++   +|+||||||+||
T Consensus        77 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Ni  149 (353)
T cd07850          77 IIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNI  149 (353)
T ss_pred             CcceeeeeccCCCccccCcEEEEEeccCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHE
Confidence            5666655543      2467999999964 88888754   378889999999999999999999   999999999999


Q ss_pred             EEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       545 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      +++.++.+||+|||++........  .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||..........
T Consensus       150 l~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~  227 (353)
T cd07850         150 VVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWN  227 (353)
T ss_pred             EECCCCCEEEccCccceeCCCCCC--CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence            999999999999999987533221  233457889999999988899999999999999999999999996542111000


Q ss_pred             hhHH-----------H---HHHhhhc--c-----cccccccc--------ccCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 038002          625 LLST-----------W---VYNCFVA--G-----EFNKLVEE--------EVDKITLERMVKTGLLCIQDEPNLRPSMKN  675 (702)
Q Consensus       625 ~~~~-----------~---~~~~~~~--~-----~~~~~~~~--------~~~~~~~~~l~~li~~cL~~dP~~RPt~~e  675 (702)
                      .+..           .   .......  .     .+......        .........+.+++.+||+.||++|||++|
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  307 (353)
T cd07850         228 KIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDD  307 (353)
T ss_pred             HHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHH
Confidence            0000           0   0000000  0     00000000        012234667889999999999999999999


Q ss_pred             HHHH
Q 038002          676 VILM  679 (702)
Q Consensus       676 vl~~  679 (702)
                      +++.
T Consensus       308 iL~~  311 (353)
T cd07850         308 ALQH  311 (353)
T ss_pred             HhcC
Confidence            9964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.94  E-value=1.8e-26  Score=244.48  Aligned_cols=203  Identities=21%  Similarity=0.227  Sum_probs=152.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++..+.+++..+++|||+++++|.+++... ...+++..+..++.|++.||+|||++   +|+|+||||+||+++.+
T Consensus        61 i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~  137 (314)
T cd08216          61 ILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGD  137 (314)
T ss_pred             hhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecC
Confidence            667778888999999999999999999999764 33588899999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCC------ceeeceeccccccCcccccC--CCCCccccccchhHhHHHhhhCCcCCcCCCCCc
Q 038002          550 WRAKISDFGLAKLLMPNQT------GIVAGVRGSRGYMAPEWQNS--GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTA  621 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~  621 (702)
                      +.+||+||+.+........      .......++..|+|||++..  ..++.++|+||||+++|||++|..||.......
T Consensus       138 ~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~  217 (314)
T cd08216         138 GKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ  217 (314)
T ss_pred             CceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            9999999998875532211      11123456778999998865  357899999999999999999999997542111


Q ss_pred             chhhhHHHHHHhh-----------hc------------cccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          622 DEVLLSTWVYNCF-----------VA------------GEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       622 ~~~~~~~~~~~~~-----------~~------------~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                         ..........           ..            .................++.+++.+||+.||++|||++++++
T Consensus       218 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         218 ---MLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             ---HHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence               0000000000           00            000000111223445678899999999999999999999987


Q ss_pred             H
Q 038002          679 M  679 (702)
Q Consensus       679 ~  679 (702)
                      .
T Consensus       295 ~  295 (314)
T cd08216         295 H  295 (314)
T ss_pred             C
Confidence            4

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=6.1e-27  Score=230.11  Aligned_cols=224  Identities=21%  Similarity=0.249  Sum_probs=169.8

Q ss_pred             ceEEEeEE----EEEeeeehhhhHhh----------------------------eeeEEEEEecCCeeEEEEecCCCCCH
Q 038002          449 RKLLTVLA----GCLGSITFLCFLIA----------------------------ISSLLVYKHRSSKKLLVYEFMSKGSL  496 (702)
Q Consensus       449 ~~l~~g~~----v~~~~~~~~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~~~~gsL  496 (702)
                      ..+|+|+.    .+........+|||                            |++|+++|+++.+.|||||-|.||+|
T Consensus        84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl  163 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL  163 (463)
T ss_pred             HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence            46788876    23333344778887                            78888999999999999999999999


Q ss_pred             HHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC---cEEEecccceeecCCCC------
Q 038002          497 ADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW---RAKISDFGLAKLLMPNQ------  567 (702)
Q Consensus       497 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~---~~kl~Dfg~a~~~~~~~------  567 (702)
                      ..+|.+.. .+++.++.++..+|+.||.|||.+   ||.||||||+|||..+-.   -+||+||.+..-+....      
T Consensus       164 LshI~~~~-~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spas  239 (463)
T KOG0607|consen  164 LSHIQKRK-HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAS  239 (463)
T ss_pred             HHHHHHhh-hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCC
Confidence            99998765 799999999999999999999999   999999999999985543   48999998886543221      


Q ss_pred             CceeeceeccccccCccccc-----CCCCCccccccchhHhHHHhhhCCcCCcCCCCCc-------chhhhHHHHHHhhh
Q 038002          568 TGIVAGVRGSRGYMAPEWQN-----SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTA-------DEVLLSTWVYNCFV  635 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-------~~~~~~~~~~~~~~  635 (702)
                      +....+.+|+..|||||+..     ...|+.+.|.||||||+|-|++|..||...-..+       .-..-.+.+.+.+.
T Consensus       240 tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQ  319 (463)
T KOG0607|consen  240 TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQ  319 (463)
T ss_pred             CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHh
Confidence            22234577999999999652     3468899999999999999999999997653211       11122233344444


Q ss_pred             ccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          636 AGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ++... +.++ --...+.+..+++...|..|+.+|-++.+++.
T Consensus       320 EGkYe-FPdk-dWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  320 EGKYE-FPDK-DWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             ccCCc-CChh-hhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            44331 1122 12345777788888899999999999999887

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.94  E-value=6.2e-27  Score=237.72  Aligned_cols=177  Identities=21%  Similarity=0.184  Sum_probs=144.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+++++..++||||+++|+|.+++.+.. .+++..+..++.|+++||+|||+.   +|+|+||||+||+++.++
T Consensus        47 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~  122 (237)
T cd05576          47 MVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFL-NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRG  122 (237)
T ss_pred             eeehhhheecCCeEEEEEecCCCCCHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence            6777788889999999999999999999987654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++++|||.+......    .....++..|+|||.+....++.++|+||+|+++|||++|+.|+........        
T Consensus       123 ~~~l~df~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~--------  190 (237)
T cd05576         123 HIQLTYFSRWSEVEDS----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN--------  190 (237)
T ss_pred             CEEEecccchhccccc----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc--------
Confidence            9999999987654322    1223456789999998888889999999999999999999988753311100        


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSM  673 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~  673 (702)
                                .......+......+.+++.+||+.||++||++
T Consensus       191 ----------~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~  223 (237)
T cd05576         191 ----------THTTLNIPEWVSEEARSLLQQLLQFNPTERLGA  223 (237)
T ss_pred             ----------cccccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence                      000001223345678899999999999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.94  E-value=1.2e-26  Score=245.38  Aligned_cols=204  Identities=24%  Similarity=0.265  Sum_probs=147.0

Q ss_pred             eeeEEEEEecC--CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHRS--SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |++++..+...  +..++||||+.+ +|.+++......+++.++..++.||++||+|||+.   +++|+||||+||+++.
T Consensus        68 i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~  143 (309)
T cd07845          68 IVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTD  143 (309)
T ss_pred             CcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECC
Confidence            56666666543  678999999975 89999877655789999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      ++.+||+|||++........ ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.............
T Consensus       144 ~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~  222 (309)
T cd07845         144 KGCLKIADFGLARTYGLPAK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLII  222 (309)
T ss_pred             CCCEEECccceeeecCCccC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            99999999999987643321 1222345778999998765 567899999999999999999999997542111100000


Q ss_pred             HHH-------HHhhhcccc-ccc-ccc-------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          628 TWV-------YNCFVAGEF-NKL-VEE-------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       628 ~~~-------~~~~~~~~~-~~~-~~~-------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ...       +........ ... ...       .......+.+.+++.+||+.||++|||++++++.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h  290 (309)
T cd07845         223 QLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES  290 (309)
T ss_pred             HhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            000       000000000 000 000       0011235677899999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.94  E-value=8.4e-27  Score=242.70  Aligned_cols=202  Identities=20%  Similarity=0.214  Sum_probs=152.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..++..++||||+++ +|.+++......+++.++..++.|++.||+|||++   +|+|+||||+||+++.++
T Consensus        60 i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~  135 (283)
T cd05118          60 IIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEG  135 (283)
T ss_pred             cchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCC
Confidence            66777778888999999999975 89988877655789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .++|+|||.+....... .......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...............
T Consensus       136 ~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~  214 (283)
T cd05118         136 VLKLADFGLARSFGSPV-RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRT  214 (283)
T ss_pred             cEEEeeeeeeEecCCCc-ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            99999999998765433 122334578889999988766 7899999999999999999999999654221110000000


Q ss_pred             HHHhhhccccccccc-----------------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 VYNCFVAGEFNKLVE-----------------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       ........+.....                 ..........+.+++.+||+.||.+||++++++.
T Consensus       215 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         215 -LGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             -cCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence             00000000000000                 1122345778999999999999999999999985

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.94  E-value=2.2e-26  Score=244.26  Aligned_cols=196  Identities=25%  Similarity=0.266  Sum_probs=153.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      ++++++++.+++..++||||+++ +|.+++......+++.++..++.|++.||.|||++   +|+|+||+|+||+++.++
T Consensus        87 iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~  162 (317)
T cd06635          87 SIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPG  162 (317)
T ss_pred             EEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCC
Confidence            77888888899999999999975 88888866555789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCccccc---CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN---SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      .+||+|||++......     ....+++.|+|||.+.   ...++.++||||||+++|||++|..||......   ....
T Consensus       163 ~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~---~~~~  234 (317)
T cd06635         163 QVKLADFGSASIASPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SALY  234 (317)
T ss_pred             CEEEecCCCccccCCc-----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH---HHHH
Confidence            9999999988754321     2345788999999873   456889999999999999999999998643111   1011


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCC
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP  687 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~  687 (702)
                           .........    .........+.+++.+||+.+|.+||+++++++.+......+
T Consensus       235 -----~~~~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  285 (317)
T cd06635         235 -----HIAQNESPT----LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP  285 (317)
T ss_pred             -----HHHhccCCC----CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence                 111111111    112234567899999999999999999999998776544433

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.94  E-value=3.3e-27  Score=248.16  Aligned_cols=229  Identities=24%  Similarity=0.265  Sum_probs=180.6

Q ss_pred             cccceEEEeEE--EEEeeeeh-hhhHhh----------------------------eeeEEEEEecCCeeEEEEecCCCC
Q 038002          446 NDKRKLLTVLA--GCLGSITF-LCFLIA----------------------------ISSLLVYKHRSSKKLLVYEFMSKG  494 (702)
Q Consensus       446 ~~~~~l~~g~~--v~~~~~~~-~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~~~~g  494 (702)
                      .-+++||+|-|  |.+.++.. +.||||                            |++|++.+-.++.+++|+|||++|
T Consensus       541 ~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnG  620 (807)
T KOG1094|consen  541 RFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENG  620 (807)
T ss_pred             ehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcC
Confidence            34678999999  77777776 788887                            999999999999999999999999


Q ss_pred             CHHHHhhcCCCC-CCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce-ee
Q 038002          495 SLADLLFNLETR-PLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI-VA  572 (702)
Q Consensus       495 sL~~~l~~~~~~-~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-~~  572 (702)
                      +|.+++..+... ..-.....|+.||+.|++||.+-   +++||||.+.|+|++.++++||+|||+++.+....... ..
T Consensus       621 DLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqg  697 (807)
T KOG1094|consen  621 DLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQG  697 (807)
T ss_pred             cHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCceeeec
Confidence            999999877433 34556677999999999999999   99999999999999999999999999999665544433 33


Q ss_pred             ceeccccccCcccccCCCCCccccccchhHhHHHhhh--CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHH
Q 038002          573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC--CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI  650 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt--G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  650 (702)
                      ...-..+|||||.+..++++.++|+|+||+++||+++  .+.||.....  ++.  .+-.......+.....  ...+..
T Consensus       698 r~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~--e~v--ven~~~~~~~~~~~~~--l~~P~~  771 (807)
T KOG1094|consen  698 RAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD--EQV--VENAGEFFRDQGRQVV--LSRPPA  771 (807)
T ss_pred             ceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH--HHH--HHhhhhhcCCCCccee--ccCCCc
Confidence            4556789999999999999999999999999999864  7788864311  111  1111111111111111  133556


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          651 TLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       651 ~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      ....+.++|.+||..|-++||+++++...|...
T Consensus       772 cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  772 CPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             CcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            677888999999999999999999999988754

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.94  E-value=1.7e-26  Score=241.67  Aligned_cols=195  Identities=22%  Similarity=0.255  Sum_probs=151.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+.++..++.+...++||||+++++|.+++.... .+++.++..++.|+++||+|||+.   +++||||+|+||+++.++
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~  142 (290)
T cd05613          67 LVTLHYAFQTDTKLHLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNG  142 (290)
T ss_pred             hhceeeEeecCCeEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCC
Confidence            6677788888999999999999999999997654 688889999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC--CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS--GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      .+||+|||++...............|+..|+|||.+..  ..++.++||||||+++|+|++|..||..........   .
T Consensus       143 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~---~  219 (290)
T cd05613         143 HVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQA---E  219 (290)
T ss_pred             CEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHH---H
Confidence            99999999998764433222334568899999998865  346789999999999999999999996432211111   1


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVILM  679 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  679 (702)
                      .... ....      ....+......+.+++.+||+.||++||     +++++++.
T Consensus       220 ~~~~-~~~~------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         220 ISRR-ILKS------EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             HHHH-hhcc------CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence            1111 1000      1112233456788999999999999997     67777653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.94  E-value=4.3e-27  Score=247.88  Aligned_cols=220  Identities=24%  Similarity=0.283  Sum_probs=176.8

Q ss_pred             ceEEEeEE--EEEeeeeh--hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCCCCHHH
Q 038002          449 RKLLTVLA--GCLGSITF--LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSKGSLAD  498 (702)
Q Consensus       449 ~~l~~g~~--v~~~~~~~--~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~gsL~~  498 (702)
                      .+||-|-.  ||.|....  +.||||                          +++|++.+-.+-.+|||+|||..|+|.+
T Consensus       273 hKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLd  352 (1157)
T KOG4278|consen  273 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLD  352 (1157)
T ss_pred             eccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHH
Confidence            35555544  77777765  666766                          7889999999999999999999999999


Q ss_pred             HhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeeceecc
Q 038002          499 LLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS  577 (702)
Q Consensus       499 ~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt  577 (702)
                      +|++... .++.-..+.++.||..|++||..+   ++|||||...|.|+.++..+||+|||+++++..+.........-.
T Consensus       353 YLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFP  429 (1157)
T KOG4278|consen  353 YLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFP  429 (1157)
T ss_pred             HHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCc
Confidence            9987653 366677788999999999999999   999999999999999999999999999999866554333344456


Q ss_pred             ccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHH
Q 038002          578 RGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMV  656 (702)
Q Consensus       578 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  656 (702)
                      ..|.|||-+....++.|+|||+|||+|||+.| |-.||....    .    ..++.....+-     .-+-+..+++.+.
T Consensus       430 IKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid----l----SqVY~LLEkgy-----RM~~PeGCPpkVY  496 (1157)
T KOG4278|consen  430 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID----L----SQVYGLLEKGY-----RMDGPEGCPPKVY  496 (1157)
T ss_pred             ccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc----H----HHHHHHHhccc-----cccCCCCCCHHHH
Confidence            78999999999999999999999999999998 888886431    1    11233222221     1123445677899


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          657 KTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       657 ~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      +||+.||++.|.+||++.|+-+.+|.+.
T Consensus       497 eLMraCW~WsPsDRPsFaeiHqafEtmf  524 (1157)
T KOG4278|consen  497 ELMRACWNWSPSDRPSFAEIHQAFETMF  524 (1157)
T ss_pred             HHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence            9999999999999999999999998643

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=4.2e-27  Score=248.33  Aligned_cols=194  Identities=21%  Similarity=0.267  Sum_probs=156.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++|+..|..++.++++.|||.||-.+.++...+..+.+.++..+++|++.||.|||++   +|||||||..|||+.-+|
T Consensus        91 ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldG  167 (1187)
T KOG0579|consen   91 IVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDG  167 (1187)
T ss_pred             HHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecC
Confidence            66777777778999999999999999999998888899999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccc-----cCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQ-----NSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                      .++|+|||.+..... .......+.|||+|||||+.     +..+|+.++||||||++|.||.-+.+|...-..    . 
T Consensus       168 dirLADFGVSAKn~~-t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp----M-  241 (1187)
T KOG0579|consen  168 DIRLADFGVSAKNKS-TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP----M-  241 (1187)
T ss_pred             cEeeecccccccchh-HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch----H-
Confidence            999999998864321 12234568899999999965     467899999999999999999999998743210    0 


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                         .+.-.+...+-+.++.   +...+..+.+++.+||..||..||++.++++.
T Consensus       242 ---RVllKiaKSePPTLlq---PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  242 ---RVLLKIAKSEPPTLLQ---PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH  289 (1187)
T ss_pred             ---HHHHHHhhcCCCcccC---cchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence               0111111222222222   34567788999999999999999999998863

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.94  E-value=2.9e-26  Score=242.17  Aligned_cols=189  Identities=25%  Similarity=0.294  Sum_probs=149.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++.+.+..++..++||||++ |+|.+++......+++.++..++.|++.||.|||+.   +|+|+||+|+||++++++
T Consensus        77 iv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~  152 (307)
T cd06607          77 TIEYKGCYLREHTAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPG  152 (307)
T ss_pred             EEEEEEEEEeCCeEEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCC
Confidence            7888888999999999999997 578887765555789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCccccc---CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN---SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      .++|+|||++......     ....+++.|+|||.+.   ...++.++||||||+++|||++|..||.....   ...  
T Consensus       153 ~~kL~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~---~~~--  222 (307)
T cd06607         153 TVKLADFGSASLVSPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSA--  222 (307)
T ss_pred             CEEEeecCcceecCCC-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH---HHH--
Confidence            9999999998765322     2345788999999874   45688999999999999999999999964311   000  


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML  680 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  680 (702)
                        ... ........    .........+.+++.+||+.+|++||++.+|+...
T Consensus       223 --~~~-~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  268 (307)
T cd06607         223 --LYH-IAQNDSPT----LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR  268 (307)
T ss_pred             --HHH-HhcCCCCC----CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence              010 01111111    11223456789999999999999999999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.94  E-value=1.7e-26  Score=242.34  Aligned_cols=192  Identities=21%  Similarity=0.282  Sum_probs=152.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..++..++|+||+++++|.+++.+.  .+++.++..++.|++.||+|||++   +++|+||||+||+++.++
T Consensus        78 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~  152 (293)
T cd06647          78 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDG  152 (293)
T ss_pred             eeehhheeeeCCcEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCC
Confidence            667777888899999999999999999998653  478899999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||++........ ......+++.|+|||.+....++.++|+||||+++|++++|+.||........ ..     
T Consensus       153 ~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~-----  225 (293)
T cd06647         153 SVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LY-----  225 (293)
T ss_pred             CEEEccCcceeccccccc-ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-ee-----
Confidence            999999999876543322 22334678899999998888889999999999999999999999965421111 00     


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                       .....+. .. .  .........+.+++.+||+.+|++||++++++.+
T Consensus       226 -~~~~~~~-~~-~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         226 -LIATNGT-PE-L--QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             -ehhcCCC-CC-C--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             0000000 00 0  1122345678899999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.94  E-value=2e-26  Score=240.62  Aligned_cols=194  Identities=24%  Similarity=0.313  Sum_probs=154.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++.+..++..++|+||+++++|.+++......+++.++..++.|++.||+|||+.   ||+|+||+|+||+++.++
T Consensus        77 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~  153 (286)
T cd06614          77 IVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDG  153 (286)
T ss_pred             eeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCC
Confidence            77888889999999999999999999999987655789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||++........ ......++..|+|||.+.+..++.++|+||||+++|+|++|..||......  . ....  
T Consensus       154 ~~~l~d~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~--~-~~~~--  227 (286)
T cd06614         154 SVKLADFGFAAQLTKEKS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL--R-ALFL--  227 (286)
T ss_pred             CEEECccchhhhhccchh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH--H-HHHH--
Confidence            999999998875533221 122345788999999998888999999999999999999999999643111  0 0000  


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                         .........   .........+.+++.+||+.+|.+||+++++++.
T Consensus       228 ---~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         228 ---ITTKGIPPL---KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             ---HHhcCCCCC---cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence               111111111   1112245678899999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.94  E-value=4.6e-26  Score=237.60  Aligned_cols=199  Identities=23%  Similarity=0.243  Sum_probs=150.2

Q ss_pred             eeeEEEEEecCCe-----eEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKHRSSK-----KLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~~~~~-----~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |+++.+.+...+.     .+++|||+.+ +|.+++.... ..+++.++..++.|+++||+|||+.   +++|+||+|+||
T Consensus        63 i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~ni  138 (287)
T cd07838          63 IVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNI  138 (287)
T ss_pred             cceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhE
Confidence            6677777777666     9999999975 8999887643 3589999999999999999999999   999999999999


Q ss_pred             EEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       545 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      +++.++.+||+|||++........  .....++..|+|||.+.+..++.++|+||||+++|||++|..||.......   
T Consensus       139 li~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~---  213 (287)
T cd07838         139 LVTSDGQVKIADFGLARIYSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD---  213 (287)
T ss_pred             EEccCCCEEEeccCcceeccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH---
Confidence            999999999999999987643322  223346888999999988889999999999999999999999986542111   


Q ss_pred             hhHHHHHHhhhc-------------cccccccc---cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCFVA-------------GEFNKLVE---EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~~~-------------~~~~~~~~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ............             ........   ..........+.+++.+||+.||++||++++++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         214 QLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             HHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            111111000000             00000000   0112344677889999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.94  E-value=2.9e-26  Score=240.88  Aligned_cols=193  Identities=23%  Similarity=0.340  Sum_probs=147.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++++..+...++||||+. ++|.+++......+++.++..++.|++.||+|||+ .   +|+||||+|+||+++++
T Consensus        76 i~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~  151 (296)
T cd06618          76 IVKCYGYFITDSDVFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDAS  151 (296)
T ss_pred             hHhhheeeecCCeEEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCC
Confidence            5667788888999999999985 48888887655578999999999999999999997 5   89999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCC----CCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL----ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                      +.+||+|||++..+.....  .....++..|+|||.+.+..    ++.++||||||+++|+|++|+.||......  ...
T Consensus       152 ~~~kL~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~  227 (296)
T cd06618         152 GNVKLCDFGISGRLVDSKA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE--FEV  227 (296)
T ss_pred             CCEEECccccchhccCCCc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH--HHH
Confidence            9999999999876533222  12234678999999886543    788999999999999999999999643111  001


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      +.     .......... .  ......+.+.+++.+||+.||++||+++++++.
T Consensus       228 ~~-----~~~~~~~~~~-~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         228 LT-----KILQEEPPSL-P--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HH-----HHhcCCCCCC-C--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            11     1111111110 0  111245678999999999999999999999865

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.94  E-value=1.5e-26  Score=241.29  Aligned_cols=203  Identities=22%  Similarity=0.249  Sum_probs=147.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++++++++..++||||+. ++|.+++.... ..+++.++..++.|++.||+|||+.   +++|+||+|+||+++.+
T Consensus        61 i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~  136 (284)
T cd07860          61 IVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE  136 (284)
T ss_pred             CcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCC
Confidence            6777888889999999999996 58999886543 3588999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.+||+|||++........ ......++..|+|||.+.+. .++.++||||||+++|||++|+.||..............
T Consensus       137 ~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~  215 (284)
T cd07860         137 GAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR  215 (284)
T ss_pred             CCEEEeeccchhhcccCcc-ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            9999999999876533221 12233467889999987654 468899999999999999999999965421110000000


Q ss_pred             HH-------HHhh-----hcccccccccc---ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          629 WV-------YNCF-----VAGEFNKLVEE---EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       629 ~~-------~~~~-----~~~~~~~~~~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..       +...     ....+......   .........+.+++.+||+.||++|||++++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         216 TLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            00       0000     00000000000   111223456789999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.94  E-value=2e-26  Score=243.36  Aligned_cols=203  Identities=20%  Similarity=0.224  Sum_probs=144.2

Q ss_pred             eeeEEEEEecC--------CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCC
Q 038002          471 ISSLLVYKHRS--------SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR  542 (702)
Q Consensus       471 i~~l~~~~~~~--------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~  542 (702)
                      |+++++.+...        ...++||||+.+ +|.+++......+++.++..++.||+.||+|||++   +++|+||||+
T Consensus        73 iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~  148 (310)
T cd07865          73 VVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAA  148 (310)
T ss_pred             ccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHH
Confidence            55666555443        456999999964 89888876655789999999999999999999999   9999999999


Q ss_pred             cEEEeCCCcEEEecccceeecCCCCC---ceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCC
Q 038002          543 NILIDDSWRAKISDFGLAKLLMPNQT---GIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNV  618 (702)
Q Consensus       543 NIll~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~  618 (702)
                      ||+++.++.+||+|||++........   .......++..|+|||.+.+. .++.++||||||+++|||++|+.||....
T Consensus       149 nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~  228 (310)
T cd07865         149 NILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNT  228 (310)
T ss_pred             HEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999986643221   112234578889999987654 47889999999999999999999996542


Q ss_pred             CCcchhhhHHHHHHhhhcccccc--------------c----ccc-ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          619 STADEVLLSTWVYNCFVAGEFNK--------------L----VEE-EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       619 ~~~~~~~~~~~~~~~~~~~~~~~--------------~----~~~-~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ... .................+.              .    ... .........+.+++.+||+.||++|||++|+++
T Consensus       229 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         229 EQH-QLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             HHH-HHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            111 1111010000000000000              0    000 000112346778999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.94  E-value=1.8e-26  Score=241.95  Aligned_cols=191  Identities=19%  Similarity=0.253  Sum_probs=150.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..++..++||||+++++|.+++...  ++++..+..++.|++.||+|||+.   +++|+||+|+||+++.++
T Consensus        79 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~  153 (292)
T cd06657          79 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDG  153 (292)
T ss_pred             hhheeeEEEeCCEEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCC
Confidence            677778888999999999999999999988543  578999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||++........ ......+++.|+|||.+.+..++.++|+||+|+++|+|++|..||......    ......
T Consensus       154 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~----~~~~~~  228 (292)
T cd06657         154 RVKLSDFGFCAQVSKEVP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMKMI  228 (292)
T ss_pred             CEEEcccccceecccccc-cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHH
Confidence            999999999876543221 223356788999999988888899999999999999999999999643111    100101


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..     .......  ........+.+++.+||+.+|.+||+++++++
T Consensus       229 ~~-----~~~~~~~--~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         229 RD-----NLPPKLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             Hh-----hCCcccC--CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            00     0111100  11123456788999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.94  E-value=1.2e-26  Score=238.45  Aligned_cols=190  Identities=22%  Similarity=0.267  Sum_probs=151.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+++++..++||||+++++|.+++... ..+++.++..++.||++||+|||++   +++|+||+|+||++++++
T Consensus        62 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~  137 (258)
T cd05578          62 LVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQG  137 (258)
T ss_pred             hHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCC
Confidence            555566778899999999999999999999766 3788999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||++.......  ......++..|+|||.+.+..++.++|+||||+++|+|++|..||..........     .
T Consensus       138 ~~~l~d~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-----~  210 (258)
T cd05578         138 HVHITDFNIATKVTPDT--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQ-----I  210 (258)
T ss_pred             CEEEeecccccccCCCc--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHH-----H
Confidence            99999999988654332  2234557889999999988889999999999999999999999997553221111     1


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCH--HHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSM--KNVI  677 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~--~evl  677 (702)
                      ......      .....+...+..+.+++.+||+.||.+||++  +|++
T Consensus       211 ~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         211 RAKQET------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             HHHhcc------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence            111110      1112233345788899999999999999999  6654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.94  E-value=2.5e-26  Score=241.00  Aligned_cols=202  Identities=19%  Similarity=0.191  Sum_probs=146.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC-
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD-  548 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~-  548 (702)
                      |++++.++..++..++||||++ ++|.+++..... ..++..+..++.||+.||+|||++   +++|+||+|+||+++. 
T Consensus        63 i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~  138 (294)
T PLN00009         63 IVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRR  138 (294)
T ss_pred             EeeEEEEEecCCeEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECC
Confidence            7888899999999999999996 588888765432 367888889999999999999999   9999999999999985 


Q ss_pred             CCcEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      ++.+||+|||++........ ......+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||.............
T Consensus       139 ~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~  217 (294)
T PLN00009        139 TNALKLADFGLARAFGIPVR-TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIF  217 (294)
T ss_pred             CCEEEEcccccccccCCCcc-ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            55799999999976533221 1223456889999998765 467899999999999999999999996542111100000


Q ss_pred             HHHHHhhhcccc----------------ccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          628 TWVYNCFVAGEF----------------NKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       628 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .. ........+                .........+...+.+.+++.+||+.+|++||+++++++
T Consensus       218 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        218 RI-LGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             HH-hCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            00 000000000                000000112234567889999999999999999999986

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.93  E-value=9.4e-26  Score=230.83  Aligned_cols=193  Identities=26%  Similarity=0.363  Sum_probs=156.2

Q ss_pred             eeeEEEEEecC--CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHRS--SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |++++..+...  ...++||||+++++|.+++.... .+++.++..++.|++.||+|||+.   +++|+||+|+||+++.
T Consensus        61 i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~  136 (260)
T cd06606          61 IVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDS  136 (260)
T ss_pred             EeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcC
Confidence            77788888877  89999999999999999998765 789999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          549 SWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      ++.++|+|||.+......... ......++..|+|||.+.....+.++||||||+++++|++|..||.....   ..   
T Consensus       137 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~---  210 (260)
T cd06606         137 DGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN---PM---  210 (260)
T ss_pred             CCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---hH---
Confidence            999999999999877544321 12335678899999999888899999999999999999999999975421   00   


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ...........     ....+......+.+++.+||+.||++||++.++++
T Consensus       211 ~~~~~~~~~~~-----~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         211 AALYKIGSSGE-----PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HHHHhccccCC-----CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            11111110011     11233344678999999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.93  E-value=9.6e-27  Score=239.41  Aligned_cols=195  Identities=24%  Similarity=0.302  Sum_probs=152.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..++..|+||||+++++|.+++.... .+++..+..++.||++||+|||+.   +++|+||+|+||+++.++
T Consensus        55 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~  130 (265)
T cd05579          55 VVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNG  130 (265)
T ss_pred             hhHHHHheecCcEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCC
Confidence            5566677788999999999999999999998765 789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCC-------ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcch
Q 038002          551 RAKISDFGLAKLLMPNQT-------GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE  623 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~  623 (702)
                      .++|+|||++........       .......++..|+|||.......+.++|+||||+++|+|++|..||.....   .
T Consensus       131 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~---~  207 (265)
T cd05579         131 HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP---E  207 (265)
T ss_pred             CEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH---H
Confidence            999999999876533211       122335578899999998888889999999999999999999999964421   1


Q ss_pred             hhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          624 VLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                      .     .......+...    ..........+.+++.+||+.+|++|||+.++.+.|+
T Consensus       208 ~-----~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         208 E-----IFQNILNGKIE----WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             H-----HHHHHhcCCcC----CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            1     11111111111    0001113678899999999999999999966666665

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.93  E-value=1.9e-26  Score=240.31  Aligned_cols=203  Identities=23%  Similarity=0.227  Sum_probs=148.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      +++++.++.+++..++||||++ ++|.+++.... ..+++..+..++.|+++||+|||++   +++|+||+|+||+++.+
T Consensus        60 iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~  135 (283)
T cd07835          60 IVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDRE  135 (283)
T ss_pred             ccCHhheeccCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCC
Confidence            6777788888999999999995 69999987654 3589999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.++|+|||++........ ......++..|+|||++.+. .++.++||||||+++|+|++|..||..............
T Consensus       136 ~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~  214 (283)
T cd07835         136 GALKLADFGLARAFGVPVR-TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFR  214 (283)
T ss_pred             CcEEEeecccccccCCCcc-ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            9999999999976533221 12223467889999987654 578999999999999999999999965421111000000


Q ss_pred             H-------HHHhh-h----ccccccccc---cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          629 W-------VYNCF-V----AGEFNKLVE---EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       629 ~-------~~~~~-~----~~~~~~~~~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .       .+... .    .........   ..........+.+++.+||+.||++|||++|+++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         215 TLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             HhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            0       00000 0    000000000   0112234467889999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.93  E-value=1.8e-26  Score=241.27  Aligned_cols=196  Identities=26%  Similarity=0.354  Sum_probs=146.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhh---c-CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLF---N-LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI  546 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~---~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  546 (702)
                      |+++++.+..++..+++|||+.. +|.++..   . ....+++..+..++.|++.||+|||+.  .+|+||||||+||++
T Consensus        65 iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~  141 (288)
T cd06616          65 IVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILL  141 (288)
T ss_pred             EeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEE
Confidence            77888888889999999999864 6555432   2 234688999999999999999999963  189999999999999


Q ss_pred             eCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCC---CCCccccccchhHhHHHhhhCCcCCcCCCCCcch
Q 038002          547 DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG---LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE  623 (702)
Q Consensus       547 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~  623 (702)
                      +.++.+||+|||++........  .....++..|+|||.+.+.   .++.++||||||+++|||++|+.||.....    
T Consensus       142 ~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----  215 (288)
T cd06616         142 DRNGNIKLCDFGISGQLVDSIA--KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----  215 (288)
T ss_pred             ccCCcEEEeecchhHHhccCCc--cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----
Confidence            9999999999999876533221  1233578899999988765   688999999999999999999999964320    


Q ss_pred             hhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          624 VLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                        ....... ....... .+........+..+.+++.+||+.||++|||+++|++.
T Consensus       216 --~~~~~~~-~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         216 --VFDQLTQ-VVKGDPP-ILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             --HHHHHhh-hcCCCCC-cCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              0011111 1111111 11112223456789999999999999999999999874

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.93  E-value=5.6e-26  Score=235.39  Aligned_cols=197  Identities=24%  Similarity=0.352  Sum_probs=148.9

Q ss_pred             eeeEEEEEecCC------eeEEEEecCCCCCHHHHhhcCC-----CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCC
Q 038002          471 ISSLLVYKHRSS------KKLLVYEFMSKGSLADLLFNLE-----TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI  539 (702)
Q Consensus       471 i~~l~~~~~~~~------~~~lV~e~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dl  539 (702)
                      |+++++++...+      ..++++||+++|+|.+++....     ..+++..+..++.|++.||+|||+.   +|+|+||
T Consensus        63 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~di  139 (273)
T cd05074          63 VIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDL  139 (273)
T ss_pred             cceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccc
Confidence            666666554322      3478999999999998875321     2468889999999999999999999   9999999


Q ss_pred             CCCcEEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCC
Q 038002          540 KLRNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVN  617 (702)
Q Consensus       540 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~  617 (702)
                      ||+||+++.++.+||+|||+++........ ......+++.|++||.+....++.++||||||+++|||++ |+.||...
T Consensus       140 kp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~  219 (273)
T cd05074         140 AARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGV  219 (273)
T ss_pred             chhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCC
Confidence            999999999999999999999865432211 1122334678999999988889999999999999999999 88888643


Q ss_pred             CCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          618 VSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      ..    .....    .......     ..........+.+++.+||+.+|++||++.++++.|+++
T Consensus       220 ~~----~~~~~----~~~~~~~-----~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         220 EN----SEIYN----YLIKGNR-----LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CH----HHHHH----HHHcCCc-----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            11    11111    1111111     011123456899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.93  E-value=3.5e-26  Score=238.33  Aligned_cols=203  Identities=20%  Similarity=0.250  Sum_probs=150.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE--TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |++++..+..++..++||||+++ +|.+++....  ..+++.++..++.|++.||+|||+.   +++|+||||+||++++
T Consensus        60 i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~  135 (284)
T cd07836          60 IVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINK  135 (284)
T ss_pred             EeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECC
Confidence            78888999999999999999985 8998886544  3588999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      ++.++|+|||++........ ......++..|++||.+.+ ..++.++||||||+++|+|++|+.||.............
T Consensus       136 ~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~  214 (284)
T cd07836         136 RGELKLADFGLARAFGIPVN-TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIF  214 (284)
T ss_pred             CCcEEEeecchhhhhcCCcc-ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Confidence            99999999999976533221 1223456889999998755 457889999999999999999999997542211111000


Q ss_pred             HHH-------HHhhh-c----ccccccccc---ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          628 TWV-------YNCFV-A----GEFNKLVEE---EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       628 ~~~-------~~~~~-~----~~~~~~~~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ...       +.... .    .........   ...+.....+.+++.+||+.||.+||+++++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         215 RIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             HHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            000       00000 0    000000000   112234567889999999999999999999985

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.93  E-value=3.8e-26  Score=233.82  Aligned_cols=192  Identities=23%  Similarity=0.342  Sum_probs=155.0

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  547 (702)
                      ++++...+..++..++|+||+++++|.+++....   ..+++.++..++.|++.||++||++   +++|+||+|+||+++
T Consensus        61 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~  137 (258)
T cd08215          61 IIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLT  137 (258)
T ss_pred             hhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEc
Confidence            5667777888899999999999999999998753   5789999999999999999999999   999999999999999


Q ss_pred             CCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          548 DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      .++.++|+|||++....... .......+++.|+|||...+..++.++|+||+|+++++|++|..||.....    .   
T Consensus       138 ~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~----~---  209 (258)
T cd08215         138 SNGLVKLGDFGISKVLSSTV-DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL----L---  209 (258)
T ss_pred             CCCcEEECCccceeecccCc-ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH----H---
Confidence            99999999999998764433 223345688899999998888899999999999999999999999964421    0   


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      . ...........     ..+......+.+++.+||..+|++||+++++++.
T Consensus       210 ~-~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         210 E-LALKILKGQYP-----PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             H-HHHHHhcCCCC-----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            1 11111111111     1222445678899999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.93  E-value=3.6e-26  Score=240.58  Aligned_cols=203  Identities=22%  Similarity=0.234  Sum_probs=145.9

Q ss_pred             eeeEEEEEecCC----------eeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCC
Q 038002          471 ISSLLVYKHRSS----------KKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIK  540 (702)
Q Consensus       471 i~~l~~~~~~~~----------~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlk  540 (702)
                      |+++++.+....          ..++|+||+++ +|.+++......+++.++..++.||+.||+|||+.   +|+|+|||
T Consensus        68 i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~  143 (302)
T cd07864          68 IVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIK  143 (302)
T ss_pred             eeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence            566666555443          89999999986 78787776655789999999999999999999999   99999999


Q ss_pred             CCcEEEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCC
Q 038002          541 LRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVS  619 (702)
Q Consensus       541 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~  619 (702)
                      |+||++++++.+||+|||++...............++..|+|||.+.+ ..++.++||||||++++||++|+.||.....
T Consensus       144 p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~  223 (302)
T cd07864         144 CSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE  223 (302)
T ss_pred             HHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Confidence            999999999999999999998764433222223345778999997754 4578999999999999999999999964321


Q ss_pred             CcchhhhHHHHHHhhhcccccccc--------c------c---ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          620 TADEVLLSTWVYNCFVAGEFNKLV--------E------E---EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       620 ~~~~~~~~~~~~~~~~~~~~~~~~--------~------~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ......+.... ........+...        +      .   ......+..+.+++.+||+.||++||+++++++
T Consensus       224 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         224 LAQLELISRLC-GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             HHHHHHHHHHh-CCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            11100010000 000000000000        0      0   001123567899999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.93  E-value=2.1e-26  Score=236.13  Aligned_cols=192  Identities=23%  Similarity=0.330  Sum_probs=151.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++.+..++..++|+||+++++|.+++.... ..+++..+..++.|+++||+|||+.   +++|+||||+||+++++
T Consensus        61 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~  137 (257)
T cd08225          61 IVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKN  137 (257)
T ss_pred             hhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCC
Confidence            6677788889999999999999999999997643 2478999999999999999999999   99999999999999888


Q ss_pred             C-cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          550 W-RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~-~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      + .+||+|||.+....... .......|++.|+|||...+..++.++|+||||++++||++|..||.....       ..
T Consensus       138 ~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------~~  209 (257)
T cd08225         138 GMVAKLGDFGIARQLNDSM-ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-------HQ  209 (257)
T ss_pred             CCeEEecccccchhccCCc-ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-------HH
Confidence            6 46999999988664322 222334588899999998888899999999999999999999999964311       11


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .... .......     .........+.+++.+||+.+|++|||++|+++.
T Consensus       210 ~~~~-~~~~~~~-----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         210 LVLK-ICQGYFA-----PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             HHHH-HhcccCC-----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            1111 1111111     1122345678999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.93  E-value=3.6e-26  Score=243.83  Aligned_cols=203  Identities=23%  Similarity=0.210  Sum_probs=149.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++.++..++..++||||+.+++|.+++.... ..+++..+..++.|++.||+|||+.   +|+||||||+||+++.+
T Consensus        61 iv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~  137 (328)
T cd08226          61 IMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGD  137 (328)
T ss_pred             cceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCC
Confidence            7888999999999999999999999999987653 3588899999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCce------eeceeccccccCcccccCC--CCCccccccchhHhHHHhhhCCcCCcCCCCCc
Q 038002          550 WRAKISDFGLAKLLMPNQTGI------VAGVRGSRGYMAPEWQNSG--LITVKSDVYSFGVVLLEIICCRSNFEVNVSTA  621 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~  621 (702)
                      +.++++||+.+..........      .....++..|+|||++.+.  .++.++||||||+++|||++|..||.......
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~  217 (328)
T cd08226         138 GLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ  217 (328)
T ss_pred             CcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH
Confidence            999999998654332211100      0112245679999998763  47899999999999999999999996542111


Q ss_pred             chhhhHHHHHHh----------------------h----hccc---------cccccccccCHHHHHHHHHHHHHcccCC
Q 038002          622 DEVLLSTWVYNC----------------------F----VAGE---------FNKLVEEEVDKITLERMVKTGLLCIQDE  666 (702)
Q Consensus       622 ~~~~~~~~~~~~----------------------~----~~~~---------~~~~~~~~~~~~~~~~l~~li~~cL~~d  666 (702)
                      ..  ........                      .    .+..         ................+.+++.+||+.|
T Consensus       218 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  295 (328)
T cd08226         218 ML--LQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQD  295 (328)
T ss_pred             HH--HHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCC
Confidence            10  00000000                      0    0000         0000011223346778999999999999


Q ss_pred             CCCCCCHHHHHH
Q 038002          667 PNLRPSMKNVIL  678 (702)
Q Consensus       667 P~~RPt~~evl~  678 (702)
                      |++|||++|+++
T Consensus       296 P~~Rpta~e~l~  307 (328)
T cd08226         296 PEKRPSASSLLS  307 (328)
T ss_pred             cccCCCHHHHhh
Confidence            999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.93  E-value=3.5e-26  Score=242.25  Aligned_cols=203  Identities=18%  Similarity=0.219  Sum_probs=147.0

Q ss_pred             eeeEEEEEecC--CeeEEEEecCCCCCHHHHhhcCC----CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKHRS--SKKLLVYEFMSKGSLADLLFNLE----TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |++++.++...  +..++||||+++ +|.+++....    ..+++..+..++.||+.||+|||+.   +|+||||||+||
T Consensus        64 i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Ni  139 (316)
T cd07842          64 VVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANI  139 (316)
T ss_pred             ccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHE
Confidence            67788888777  899999999975 7777664321    2578899999999999999999999   999999999999


Q ss_pred             EEeC----CCcEEEecccceeecCCCCC--ceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCC
Q 038002          545 LIDD----SWRAKISDFGLAKLLMPNQT--GIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVN  617 (702)
Q Consensus       545 ll~~----~~~~kl~Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~  617 (702)
                      +++.    ++.+||+|||++........  .......++..|+|||.+.+ ..++.++||||||+++++|++|+.||...
T Consensus       140 l~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~  219 (316)
T cd07842         140 LVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR  219 (316)
T ss_pred             EEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence            9999    99999999999987643322  11233567889999997765 46789999999999999999999999755


Q ss_pred             CCCcch------hhhHHHHHHhhh------------cccccc--------ccc-cc----cCH--HHHHHHHHHHHHccc
Q 038002          618 VSTADE------VLLSTWVYNCFV------------AGEFNK--------LVE-EE----VDK--ITLERMVKTGLLCIQ  664 (702)
Q Consensus       618 ~~~~~~------~~~~~~~~~~~~------------~~~~~~--------~~~-~~----~~~--~~~~~l~~li~~cL~  664 (702)
                      ......      ..+... ...+.            ..+...        ... ..    .+.  ....++.+++.+||+
T Consensus       220 ~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  298 (316)
T cd07842         220 EAKIKKSNPFQRDQLERI-FEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLE  298 (316)
T ss_pred             cccccccchhHHHHHHHH-HHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhc
Confidence            322100      000000 00000            000000        000 00    001  334578899999999


Q ss_pred             CCCCCCCCHHHHHH
Q 038002          665 DEPNLRPSMKNVIL  678 (702)
Q Consensus       665 ~dP~~RPt~~evl~  678 (702)
                      .||++|||++|+++
T Consensus       299 ~~P~~Rps~~eil~  312 (316)
T cd07842         299 YDPTKRITAEEALE  312 (316)
T ss_pred             CCcccCcCHHHHhc
Confidence            99999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=4.7e-27  Score=243.28  Aligned_cols=189  Identities=21%  Similarity=0.219  Sum_probs=158.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..|++++..|++||-|-||.|...|.+.+ .++...+.-++.-+++|++|||++   +||.|||||+|.+++.+|
T Consensus       482 IvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg-~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~G  557 (732)
T KOG0614|consen  482 IVRLYRTFRDSKYVYMLMEACLGGELWTILRDRG-SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRG  557 (732)
T ss_pred             HHHHHHHhccchhhhhhHHhhcCchhhhhhhhcC-CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCC
Confidence            8888989999999999999999999999998776 788888888999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      -+||.|||+|+.+.....  .-+++|||.|.|||++.++..+.++|.||||+++|||++|.+||......    .    .
T Consensus       558 y~KLVDFGFAKki~~g~K--TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm----k----t  627 (732)
T KOG0614|consen  558 YLKLVDFGFAKKIGSGRK--TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM----K----T  627 (732)
T ss_pred             ceEEeehhhHHHhccCCc--eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH----H----H
Confidence            999999999998865443  45789999999999999999999999999999999999999999765221    1    1


Q ss_pred             HHhhhcccccccccc-ccCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 038002          631 YNCFVAGEFNKLVEE-EVDKITLERMVKTGLLCIQDEPNLRPS-----MKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~  678 (702)
                      +..+..+.     +. +.+........+++++....+|.+|.-     +.+|-+
T Consensus       628 Yn~ILkGi-----d~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkk  676 (732)
T KOG0614|consen  628 YNLILKGI-----DKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKK  676 (732)
T ss_pred             HHHHHhhh-----hhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHh
Confidence            22222221     11 334556677888888899999999965     556554

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.2e-25  Score=229.97  Aligned_cols=190  Identities=25%  Similarity=0.364  Sum_probs=153.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      ++++..++.+++..++||||+++++|.+++.... .+++..+..++.|++.||.+||+.   +|+|+||+|+||+++.++
T Consensus        61 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~  136 (254)
T cd06627          61 IVKYIGSIETSDSLYIILEYAENGSLRQIIKKFG-PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDG  136 (254)
T ss_pred             ccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCC
Confidence            6777888888999999999999999999997663 789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||.+......... .....++..|+|||...+..++.++||||+|+++++|++|+.||.....    ...   .
T Consensus       137 ~~~l~d~~~~~~~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~---~  208 (254)
T cd06627         137 VVKLADFGVATKLNDVSKD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAA---L  208 (254)
T ss_pred             CEEEeccccceecCCCccc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHH---H
Confidence            9999999999876543321 2335678899999998877789999999999999999999999964311    000   0


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .. ......     ...+......+.+++.+||+.+|++||++++++.
T Consensus       209 ~~-~~~~~~-----~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         209 FR-IVQDDH-----PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HH-HhccCC-----CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            11 111111     1122334668889999999999999999999984

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=1.6e-26  Score=238.73  Aligned_cols=237  Identities=25%  Similarity=0.300  Sum_probs=176.0

Q ss_pred             ceEEEeEE--EEEeeeehhhhHhh--------------------------eeeEEEEEecCC----eeEEEEecCCCCCH
Q 038002          449 RKLLTVLA--GCLGSITFLCFLIA--------------------------ISSLLVYKHRSS----KKLLVYEFMSKGSL  496 (702)
Q Consensus       449 ~~l~~g~~--v~~~~~~~~~~avk--------------------------i~~l~~~~~~~~----~~~lV~e~~~~gsL  496 (702)
                      ..+++|.|  |++|.+..+.||||                          |++++...+.+.    .++||+||.+.|+|
T Consensus       216 eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL  295 (534)
T KOG3653|consen  216 ELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSL  295 (534)
T ss_pred             HHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcH
Confidence            46788887  99999999999999                          666666655555    89999999999999


Q ss_pred             HHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcC------CCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc-
Q 038002          497 ADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC------EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG-  569 (702)
Q Consensus       497 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~------~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-  569 (702)
                      .++|+.+  ..+|.+..+|+..+++||+|||+..      .+.|+|||||.+||||..++...|+|||+|..+...... 
T Consensus       296 ~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~  373 (534)
T KOG3653|consen  296 CDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQG  373 (534)
T ss_pred             HHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCc
Confidence            9999865  5999999999999999999999863      458999999999999999999999999999988654432 


Q ss_pred             eeeceeccccccCcccccCCC-CC-----ccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH---------HHHHHhh
Q 038002          570 IVAGVRGSRGYMAPEWQNSGL-IT-----VKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS---------TWVYNCF  634 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~-~~-----~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~---------~~~~~~~  634 (702)
                      ......||.+|||||++.+.. +.     .+.||||+|.+||||++.-.-+......+-+..+.         +..+...
T Consensus       374 d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~V  453 (534)
T KOG3653|consen  374 DTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELV  453 (534)
T ss_pred             chhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHH
Confidence            223478999999999987642 22     36899999999999998654332110111111111         1111112


Q ss_pred             hcccccccccc-ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCC
Q 038002          635 VAGEFNKLVEE-EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP  687 (702)
Q Consensus       635 ~~~~~~~~~~~-~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~  687 (702)
                      .....+..+.. -........+.+.+..||..||+.|.|+.=+.+++.++..+.
T Consensus       454 V~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~  507 (534)
T KOG3653|consen  454 VRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW  507 (534)
T ss_pred             HhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence            22222122221 122355778889999999999999999998888887765544

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.93  E-value=4.4e-26  Score=257.87  Aligned_cols=229  Identities=21%  Similarity=0.141  Sum_probs=154.2

Q ss_pred             ccccccceEEEeEE--EEEeeeeh------hhhHhheeeEE------------------------E----E-EecCCeeE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF------LCFLIAISSLL------------------------V----Y-KHRSSKKL  485 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~------~~~avki~~l~------------------------~----~-~~~~~~~~  485 (702)
                      +.+...++||+|+|  ||++....      ..+|+|.+.-.                        .    . ...+...+
T Consensus       132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (566)
T PLN03225        132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKEDEYW  211 (566)
T ss_pred             CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCCceE
Confidence            34556788999998  99987653      45666632210                        0    0 14567899


Q ss_pred             EEEecCCCCCHHHHhhcCCCC-------------------CCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE
Q 038002          486 LVYEFMSKGSLADLLFNLETR-------------------PLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI  546 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~~~~-------------------~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  546 (702)
                      |||||+.+++|.+++......                   .....+..++.||+.||+|||++   +|+||||||+|||+
T Consensus       212 LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~NILl  288 (566)
T PLN03225        212 LVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQNIIF  288 (566)
T ss_pred             EEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHHHEEE
Confidence            999999999999998754311                   11234567999999999999999   99999999999999


Q ss_pred             eC-CCcEEEecccceeecCCCCCceeeceeccccccCcccccCC----------------------CCCccccccchhHh
Q 038002          547 DD-SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG----------------------LITVKSDVYSFGVV  603 (702)
Q Consensus       547 ~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~DiwSlGvi  603 (702)
                      +. ++.+||+|||+++.+............+++.|+|||.+...                      .++.++|||||||+
T Consensus       289 ~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGvi  368 (566)
T PLN03225        289 SEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLI  368 (566)
T ss_pred             eCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHH
Confidence            86 57999999999986644443344556789999999954321                      23456799999999


Q ss_pred             HHHhhhCCcCCcCCCCCcchhhhHHHHHHh-hhccccccccccc----------cCHHHHHHHHHHHHHcccCCCCCCCC
Q 038002          604 LLEIICCRSNFEVNVSTADEVLLSTWVYNC-FVAGEFNKLVEEE----------VDKITLERMVKTGLLCIQDEPNLRPS  672 (702)
Q Consensus       604 l~elltG~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~l~~li~~cL~~dP~~RPt  672 (702)
                      +|||+++..|+...     ...+....... .....+...+...          ..........+|+.+||+.||++|||
T Consensus       369 L~el~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t  443 (566)
T PLN03225        369 FLQMAFPNLRSDSN-----LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRIS  443 (566)
T ss_pred             HHHHHhCcCCCchH-----HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCC
Confidence            99999977665321     00000000000 0000000000010          00111234568999999999999999


Q ss_pred             HHHHHHH
Q 038002          673 MKNVILM  679 (702)
Q Consensus       673 ~~evl~~  679 (702)
                      ++|+++.
T Consensus       444 a~e~L~H  450 (566)
T PLN03225        444 AKAALAH  450 (566)
T ss_pred             HHHHhCC
Confidence            9999974

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.93  E-value=6.7e-26  Score=236.09  Aligned_cols=203  Identities=20%  Similarity=0.269  Sum_probs=148.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++.+..++..++||||+ +++|.+++.... ..+++.++..++.|++.+|.|||++   +++|+||+|+||+++++
T Consensus        60 i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~  135 (283)
T cd07830          60 IVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGP  135 (283)
T ss_pred             chhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCC
Confidence            444555666789999999999 789999887654 4689999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCccccc-CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN-SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.++|+|||++........  .....++..|+|||.+. ...++.++|+||||++++||++|+.||..............
T Consensus       136 ~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~  213 (283)
T cd07830         136 EVVKIADFGLAREIRSRPP--YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICS  213 (283)
T ss_pred             CCEEEeecccceeccCCCC--cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHH
Confidence            9999999999986643222  22345788999999774 45678999999999999999999999965422111100000


Q ss_pred             ---------HHHHhhhcccccccccc-------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          629 ---------WVYNCFVAGEFNKLVEE-------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       629 ---------~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                               +.............+..       .........+.+++.+||+.||++||+++|++..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         214 VLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             hcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence                     00000000000000000       0111124679999999999999999999999853

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.93  E-value=2.7e-26  Score=247.97  Aligned_cols=228  Identities=21%  Similarity=0.264  Sum_probs=170.7

Q ss_pred             cceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEec------CCeeEEEEe
Q 038002          448 KRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHR------SSKKLLVYE  489 (702)
Q Consensus       448 ~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~------~~~~~lV~e  489 (702)
                      ...+|+|++  ||++.-+.  +.||||                            |+++++.-++      .....+|||
T Consensus        18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE   97 (732)
T KOG4250|consen   18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME   97 (732)
T ss_pred             hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence            467999998  99988544  889998                            7777655544      457899999


Q ss_pred             cCCCCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe----CCCcEEEecccceeec
Q 038002          490 FMSKGSLADLLFNLET--RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID----DSWRAKISDFGLAKLL  563 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~----~~~~~kl~Dfg~a~~~  563 (702)
                      ||.||||+..|.+..+  .+++.+.+.++..+..||.|||++   +|+||||||.||++-    .....||+|||.|+.+
T Consensus        98 yC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel  174 (732)
T KOG4250|consen   98 YCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL  174 (732)
T ss_pred             ecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence            9999999999987643  599999999999999999999999   999999999999982    3335899999999987


Q ss_pred             CCCCCceeeceeccccccCccccc-CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhc------
Q 038002          564 MPNQTGIVAGVRGSRGYMAPEWQN-SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVA------  636 (702)
Q Consensus       564 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~------  636 (702)
                      ..+.  ....+.||+.|++||... .+.|+..+|.|||||++|+.+||..||.........   .+..+.....      
T Consensus       175 ~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~---~~~~~~~~tkkp~~v~  249 (732)
T KOG4250|consen  175 DDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNN---KEIMWHIITKKPSGVA  249 (732)
T ss_pred             CCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcccc---chhhhhhhccCCCcee
Confidence            5444  567889999999999888 488999999999999999999999999765333211   0111111100      


Q ss_pred             --------c--cccccccc--ccCHHHHHHHHHHHHHcccCCCCCCC--CHHHHHHHHhCC
Q 038002          637 --------G--EFNKLVEE--EVDKITLERMVKTGLLCIQDEPNLRP--SMKNVILMLEGT  683 (702)
Q Consensus       637 --------~--~~~~~~~~--~~~~~~~~~l~~li~~cL~~dP~~RP--t~~evl~~Le~~  683 (702)
                              +  ++...++.  ........++-+.+..+|..+|++|-  ...+.-..+..+
T Consensus       250 i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dI  310 (732)
T KOG4250|consen  250 IGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDI  310 (732)
T ss_pred             EeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHH
Confidence                    0  00011111  23455566777788888999999997  544444444433

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.93  E-value=3.2e-26  Score=245.16  Aligned_cols=197  Identities=19%  Similarity=0.251  Sum_probs=143.9

Q ss_pred             CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          482 SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       482 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      ...++||||+. ++|.+++.... .+++..+..++.|++.||+|||++   +++|+||||+||+++.++.+||+|||++.
T Consensus        82 ~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~  156 (337)
T cd07858          82 NDVYIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLAR  156 (337)
T ss_pred             CcEEEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence            45899999996 68999887654 689999999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH-------HHh
Q 038002          562 LLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV-------YNC  633 (702)
Q Consensus       562 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~-------~~~  633 (702)
                      ...... .......++..|+|||.+.. ..++.++||||||+++|+|++|+.||................       ...
T Consensus       157 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (337)
T cd07858         157 TTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF  235 (337)
T ss_pred             ccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence            654322 22233457889999997754 468899999999999999999999996542110000000000       000


Q ss_pred             hhcccccc-------ccc---cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhCCc
Q 038002          634 FVAGEFNK-------LVE---EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM--LEGTM  684 (702)
Q Consensus       634 ~~~~~~~~-------~~~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~--Le~~~  684 (702)
                      ........       ...   .......+..+.+++.+||+.+|++|||++++++.  ++...
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH  298 (337)
T ss_pred             cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence            00000000       000   01122346778999999999999999999999986  65543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=9.1e-26  Score=232.86  Aligned_cols=191  Identities=21%  Similarity=0.238  Sum_probs=148.9

Q ss_pred             eeeEEEEEec--CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHR--SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |+++++.+.+  +...++||||+++++|.+++.... .+++..+..++.|++.||+|||++   +++|+||||+||+++.
T Consensus        66 i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~  141 (264)
T cd06653          66 IVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDS  141 (264)
T ss_pred             cceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcC
Confidence            6677766654  457899999999999999997654 578899999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCC--CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          549 SWRAKISDFGLAKLLMPNQ--TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                      ++.++|+|||+++......  ........++..|+|||.+.+..++.++|+||||+++|+|++|+.||......   .. 
T Consensus       142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~-  217 (264)
T cd06653         142 AGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM---AA-  217 (264)
T ss_pred             CCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH---HH-
Confidence            9999999999998653211  11122355788999999998888899999999999999999999999643111   00 


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                         .......+     ..+..+....+.+.+++.+||+ +|.+||++.+++.
T Consensus       218 ---~~~~~~~~-----~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         218 ---IFKIATQP-----TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             ---HHHHHcCC-----CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence               11111111     1123344566789999999999 5799999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.93  E-value=4.9e-26  Score=233.12  Aligned_cols=190  Identities=27%  Similarity=0.341  Sum_probs=153.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  547 (702)
                      |+++...+..+...++||||+++++|.+++.+.   ...+++..+..++.|++.||+|||+.   +++|+||+|+||+++
T Consensus        61 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~  137 (256)
T cd08530          61 IISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLV  137 (256)
T ss_pred             chhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEe
Confidence            666667778889999999999999999998662   23578899999999999999999999   999999999999999


Q ss_pred             CCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          548 DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      +++.+||+|||++.......   .....++..|+|||.+.+..++.++|+||||+++|+|++|+.||.....    ..+.
T Consensus       138 ~~~~~kl~d~g~~~~~~~~~---~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~----~~~~  210 (256)
T cd08530         138 ANDLVKIGDLGISKVLKKNM---AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM----QDLR  210 (256)
T ss_pred             cCCcEEEeeccchhhhccCC---cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHH
Confidence            99999999999998764431   2234578899999999888899999999999999999999999964421    1111


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                          ........     +........++.+++.+||+.+|++||++.++++.
T Consensus       211 ----~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         211 ----YKVQRGKY-----PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             ----HHHhcCCC-----CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                11111111     12233566789999999999999999999999863

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.93  E-value=4.6e-26  Score=243.67  Aligned_cols=195  Identities=21%  Similarity=0.274  Sum_probs=142.8

Q ss_pred             cCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccc
Q 038002          480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGL  559 (702)
Q Consensus       480 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~  559 (702)
                      .....++||||+. ++|.+++.... .+++..+..++.||+.||+|||++   +|+||||||+||++++++.+||+|||+
T Consensus        79 ~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~  153 (334)
T cd07855          79 DFKDVYVVMDLME-SDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGM  153 (334)
T ss_pred             CCceEEEEEehhh-hhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEeccccc
Confidence            3567899999995 58999987654 589999999999999999999999   999999999999999999999999999


Q ss_pred             eeecCCCCC---ceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH------
Q 038002          560 AKLLMPNQT---GIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW------  629 (702)
Q Consensus       560 a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~------  629 (702)
                      +........   .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...............      
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~  233 (334)
T cd07855         154 ARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSE  233 (334)
T ss_pred             ceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChh
Confidence            986543222   11223568889999998755 46889999999999999999999999654211100000000      


Q ss_pred             -HHHhhhccccccc---cc-------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          630 -VYNCFVAGEFNKL---VE-------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       630 -~~~~~~~~~~~~~---~~-------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                       .........+...   ..       .......+..+.+++.+||+.+|++||++++++..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  294 (334)
T cd07855         234 EVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH  294 (334)
T ss_pred             HhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence             0000000000000   00       01122346789999999999999999999998874

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.93  E-value=1.4e-25  Score=240.22  Aligned_cols=203  Identities=22%  Similarity=0.261  Sum_probs=147.1

Q ss_pred             eeeEEEEEec--CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHR--SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |+++++++..  +...++||||++ ++|.+++...  .+++..+..++.||+.||+|||+.   +|+|+||||+||+++.
T Consensus        69 i~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~  142 (337)
T cd07852          69 IVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNS  142 (337)
T ss_pred             ccceeeeeccCCCceEEEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcC
Confidence            6677766643  457899999997 5999988654  678889999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCC----ceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcch
Q 038002          549 SWRAKISDFGLAKLLMPNQT----GIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE  623 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~  623 (702)
                      ++.+||+|||++........    .......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.........
T Consensus       143 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~  222 (337)
T cd07852         143 DCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQL  222 (337)
T ss_pred             CCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence            99999999999986643322    12234568899999997754 56789999999999999999999999643211110


Q ss_pred             hhhHHHH-------HHhhh---ccccccccc-------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          624 VLLSTWV-------YNCFV---AGEFNKLVE-------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       624 ~~~~~~~-------~~~~~---~~~~~~~~~-------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .......       .....   ...+...+.       ..........+.+++.+||+.||++|||+.++++.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         223 EKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            0000000       00000   000000000       01112246788999999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.93  E-value=1.2e-25  Score=238.29  Aligned_cols=188  Identities=25%  Similarity=0.312  Sum_probs=147.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      ++++...+.+++..++||||+. ++|.+++......+++.++..++.||+.||+|||+.   +++|+||+|+||+++.++
T Consensus        83 iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~  158 (313)
T cd06633          83 TIEYKGCYLKEHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPG  158 (313)
T ss_pred             CccEEEEEEeCCEEEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCC
Confidence            7778888899999999999996 588888876655789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCccccc---CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN---SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      .+||+|||++.....     .....++..|+|||.+.   ...++.++||||||+++|||++|..||.......    . 
T Consensus       159 ~~kL~dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~----~-  228 (313)
T cd06633         159 QVKLADFGSASKSSP-----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS----A-  228 (313)
T ss_pred             CEEEeecCCCcccCC-----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH----H-
Confidence            999999998864321     12346788999999874   4568889999999999999999999986431111    0 


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                        ... .........    ........+.+++.+||+.+|++||++++++..
T Consensus       229 --~~~-~~~~~~~~~----~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         229 --LYH-IAQNDSPTL----QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             --HHH-HHhcCCCCC----CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              000 011111111    112234568889999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.93  E-value=1.2e-25  Score=237.59  Aligned_cols=191  Identities=24%  Similarity=0.258  Sum_probs=149.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      ++++.+++..++..++||||+. |+|.+++......+++.++..++.|++.||.|||++   +++|+||+|+||+++.++
T Consensus        77 i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~  152 (308)
T cd06634          77 TIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPG  152 (308)
T ss_pred             cccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCC
Confidence            6777788888999999999996 588888766555688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCccccc---CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN---SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      .++|+|||++......     ....+++.|+|||.+.   ...++.++||||||+++|+|++|..||......  . .  
T Consensus       153 ~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~-~--  222 (308)
T cd06634         153 LVKLGDFGSASIMAPA-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--S-A--  222 (308)
T ss_pred             cEEECCcccceeecCc-----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH--H-H--
Confidence            9999999998765322     2345788999999864   356788999999999999999999998543111  0 0  


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                        . ..........    .........+.+++.+||+.+|++||+++++++...-
T Consensus       223 --~-~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~  270 (308)
T cd06634         223 --L-YHIAQNESPA----LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV  270 (308)
T ss_pred             --H-HHHhhcCCCC----cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccc
Confidence              0 0111111111    1122345678899999999999999999999976443

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.93  E-value=6.8e-26  Score=241.84  Aligned_cols=209  Identities=22%  Similarity=0.278  Sum_probs=152.2

Q ss_pred             eeeEEEEEecCC-----eeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEE
Q 038002          471 ISSLLVYKHRSS-----KKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL  545 (702)
Q Consensus       471 i~~l~~~~~~~~-----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIl  545 (702)
                      |+++.+.+...+     ..|+||||++ ++|.+++.... .+++..+..++.||+.||+|||++   +|+|+||||+||+
T Consensus        61 i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nil  135 (330)
T cd07834          61 IIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNIL  135 (330)
T ss_pred             hhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence            444455555443     8899999997 48999987655 789999999999999999999999   9999999999999


Q ss_pred             EeCCCcEEEecccceeecCCCCC--ceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcc
Q 038002          546 IDDSWRAKISDFGLAKLLMPNQT--GIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTAD  622 (702)
Q Consensus       546 l~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~  622 (702)
                      ++.++.++|+|||++........  .......++..|+|||.+.+. .++.++|+||||+++|+|++|..||........
T Consensus       136 i~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~  215 (330)
T cd07834         136 VNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ  215 (330)
T ss_pred             EcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH
Confidence            99999999999999987654331  122344578899999998877 889999999999999999999999965421110


Q ss_pred             hhhhHHHHHHh--------hhccccccccc----------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhC
Q 038002          623 EVLLSTWVYNC--------FVAGEFNKLVE----------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM--LEG  682 (702)
Q Consensus       623 ~~~~~~~~~~~--------~~~~~~~~~~~----------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~--Le~  682 (702)
                      ...... ....        .........+.          ..........+.+++.+||+.+|++||+++++++.  +++
T Consensus       216 ~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~  294 (330)
T cd07834         216 LNLIVE-VLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ  294 (330)
T ss_pred             HHHHHH-hcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence            000000 0000        00000000000          01122346678999999999999999999999984  555


Q ss_pred             CcC
Q 038002          683 TME  685 (702)
Q Consensus       683 ~~~  685 (702)
                      ...
T Consensus       295 ~~~  297 (330)
T cd07834         295 LHD  297 (330)
T ss_pred             hcc
Confidence            443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.93  E-value=7.5e-26  Score=242.22  Aligned_cols=197  Identities=22%  Similarity=0.288  Sum_probs=141.2

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccce
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA  560 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a  560 (702)
                      ....++||||+.+ +|.+++...  .+++..+..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++
T Consensus        80 ~~~~~lv~e~~~~-~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~  153 (336)
T cd07849          80 FNDVYIVQELMET-DLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLA  153 (336)
T ss_pred             cceEEEEehhccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccce
Confidence            3468999999965 888887543  589999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCCc--eeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH-------
Q 038002          561 KLLMPNQTG--IVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV-------  630 (702)
Q Consensus       561 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~-------  630 (702)
                      .........  ......+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||................       
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~  233 (336)
T cd07849         154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQED  233 (336)
T ss_pred             eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence            865432211  1223567899999997654 568899999999999999999999996432110000000000       


Q ss_pred             HHhhhccccc---cccc--c-----ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhCC
Q 038002          631 YNCFVAGEFN---KLVE--E-----EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM--LEGT  683 (702)
Q Consensus       631 ~~~~~~~~~~---~~~~--~-----~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~--Le~~  683 (702)
                      ..........   ....  .     ...+.....+.+++.+||+.||++|||+.|+++.  ++..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence            0000000000   0000  0     0112235678999999999999999999999986  5554

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.93  E-value=3.5e-26  Score=237.52  Aligned_cols=190  Identities=23%  Similarity=0.296  Sum_probs=151.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..++..++|||++++++|.+++.+.+ .+++.++..++.|++.||++||+.   +++|+||+|+||+++.++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~  139 (280)
T cd05581          64 IIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDM  139 (280)
T ss_pred             chhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCC
Confidence            3444556677899999999999999999998765 799999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCC-------------------ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCC
Q 038002          551 RAKISDFGLAKLLMPNQT-------------------GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCR  611 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~  611 (702)
                      .++|+|||++........                   .......++..|+|||......++.++|+||||++++++++|+
T Consensus       140 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~  219 (280)
T cd05581         140 HIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK  219 (280)
T ss_pred             CEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCC
Confidence            999999999986643321                   1122345788999999988888999999999999999999999


Q ss_pred             cCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCH----HHHHH
Q 038002          612 SNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSM----KNVIL  678 (702)
Q Consensus       612 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~----~evl~  678 (702)
                      .||....   .....     .....      .....+....+.+.+++.+||+.+|++||++    +++++
T Consensus       220 ~p~~~~~---~~~~~-----~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         220 PPFRGSN---EYLTF-----QKILK------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             CCCCCcc---HHHHH-----HHHHh------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            9997542   11111     11111      0112233346778999999999999999999    77764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.93  E-value=6.9e-26  Score=235.67  Aligned_cols=203  Identities=24%  Similarity=0.227  Sum_probs=150.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      ++++.+++...+..++||||++ ++|.+++......+++.++..++.|++.||+|||++   +|+|+||+|+||++++++
T Consensus        60 i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~  135 (282)
T cd07829          60 IVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDG  135 (282)
T ss_pred             HHHHHhhhhcCCceEEEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCC
Confidence            5566677778899999999998 599999987655789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .++|+|||.+........ ......++..|+|||.+.+. .++.++||||||++++||++|+.||...............
T Consensus       136 ~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~  214 (282)
T cd07829         136 VLKLADFGLARAFGIPLR-TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQI  214 (282)
T ss_pred             CEEEecCCcccccCCCcc-ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHH
Confidence            999999999987643322 12233457789999988766 7899999999999999999999999654211100000000


Q ss_pred             -------HHHhh-----hcccccccccc---ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 -------VYNCF-----VAGEFNKLVEE---EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 -------~~~~~-----~~~~~~~~~~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                             .+...     ...........   ...+.....+.+++.+||+.||++||++++++.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         215 LGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             hCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence                   00000     00001000000   111123567999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.93  E-value=2e-26  Score=239.05  Aligned_cols=212  Identities=19%  Similarity=0.196  Sum_probs=170.7

Q ss_pred             ceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEecCCCCC
Q 038002          449 RKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEFMSKGS  495 (702)
Q Consensus       449 ~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~~~~gs  495 (702)
                      +.+|.|-|  ||-|..+.  +.||||                             |+.+...+++.++.++|||-+.|-=
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDM  649 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDM  649 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchH
Confidence            46888877  88777665  888988                             8888889999999999999997655


Q ss_pred             HHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC---CcEEEecccceeecCCCCCceee
Q 038002          496 LADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS---WRAKISDFGLAKLLMPNQTGIVA  572 (702)
Q Consensus       496 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~  572 (702)
                      |+-+|.....+++++...-++.||+.||.|||.+   +|+|+||||+|||+...   -++||+|||+|+++....  ...
T Consensus       650 LEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks--FRr  724 (888)
T KOG4236|consen  650 LEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS--FRR  724 (888)
T ss_pred             HHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchhh--hhh
Confidence            5555666666899998888999999999999999   99999999999999554   469999999999985543  345


Q ss_pred             ceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHH
Q 038002          573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL  652 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  652 (702)
                      .+.|||.|+|||+++++.|...-|+||.|||+|--++|..||.......+++....            -+..+..-.+.+
T Consensus       725 sVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAa------------FMyPp~PW~eis  792 (888)
T KOG4236|consen  725 SVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAA------------FMYPPNPWSEIS  792 (888)
T ss_pred             hhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccc------------cccCCCchhhcC
Confidence            67899999999999999999999999999999999999999975533322222111            122223344567


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHH
Q 038002          653 ERMVKTGLLCIQDEPNLRPSMKNVI  677 (702)
Q Consensus       653 ~~l~~li~~cL~~dP~~RPt~~evl  677 (702)
                      ...+++|...||..-++|-+.++.+
T Consensus       793 ~~AidlIn~LLqVkm~kRysvdk~l  817 (888)
T KOG4236|consen  793 PEAIDLINNLLQVKMRKRYSVDKSL  817 (888)
T ss_pred             HHHHHHHHHHHHHHHHHhcchHhhc
Confidence            7788889999999999998877643

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=99.93  E-value=4.4e-25  Score=197.11  Aligned_cols=112  Identities=33%  Similarity=0.470  Sum_probs=98.9

Q ss_pred             ccccCCCCeeEcCCCeEEEEEEeCCC-c-eEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEcCCCCeee
Q 038002           35 SLSPSGQHSWNSSSGLFQFGFYKQGS-G-YSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKP  112 (702)
Q Consensus        35 ~l~~~~~~~~~s~~g~f~lgF~~~~~-~-~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~~~~~~~w  112 (702)
                      .|..+  ++|+|++|.|++|||.... . .+++|||.+++ +++||.||++.| ....+.|.|+.||+|+|+|.+|.++|
T Consensus         3 ~l~~~--~~l~s~~~~f~~G~~~~~~q~~dgnlv~~~~~~-~~~vW~snt~~~-~~~~~~l~l~~dGnLvl~~~~g~~vW   78 (116)
T cd00028           3 PLSSG--QTLVSSGSLFELGFFKLIMQSRDYNLILYKGSS-RTVVWVANRDNP-SGSSCTLTLQSDGNLVIYDGSGTVVW   78 (116)
T ss_pred             CcCCC--CEEEeCCCcEEEecccCCCCCCeEEEEEEeCCC-CeEEEECCCCCC-CCCCEEEEEecCCCeEEEcCCCcEEE
Confidence            45544  7899999999999999654 3 89999999877 889999999987 36778999999999999999999999


Q ss_pred             eeccccCCcceeEEEecCcCEEEeecCCceEeeecCCC
Q 038002          113 IADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTP  150 (702)
Q Consensus       113 ~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~P  150 (702)
                      +|++.......+|+|+|||||||++..+.+||||||||
T Consensus        79 ~S~~~~~~~~~~~~L~ddGnlvl~~~~~~~~W~Sf~~P  116 (116)
T cd00028          79 SSNTTRVNGNYVLVLLDDGNLVLYDSDGNFLWQSFDYP  116 (116)
T ss_pred             EecccCCCCceEEEEeCCCCEEEECCCCCEEEcCCCCC
Confidence            99985435678999999999999999999999999999

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.92  E-value=1.1e-25  Score=237.72  Aligned_cols=193  Identities=21%  Similarity=0.214  Sum_probs=138.7

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccce
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA  560 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a  560 (702)
                      ....++||||+.+ +|...+......+++.++..++.|+++||+|||++   +|+|+||||+||++++++.+||+|||++
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~  162 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLA  162 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCccc
Confidence            4467999999965 78887766555799999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCCc----------eeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          561 KLLMPNQTG----------IVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       561 ~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .........          ......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||.............. 
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~-  241 (311)
T cd07866         163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK-  241 (311)
T ss_pred             hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-
Confidence            865432211          1123456888999997754 4578999999999999999999999964422111110000 


Q ss_pred             HHHhhhcc------cccc----ccccc-------cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 VYNCFVAG------EFNK----LVEEE-------VDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 ~~~~~~~~------~~~~----~~~~~-------~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ........      .+..    .....       ........+.+++.+||+.||++|||+.|++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            00000000      0000    00000       01122367889999999999999999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.92  E-value=1.9e-25  Score=238.98  Aligned_cols=201  Identities=19%  Similarity=0.173  Sum_probs=150.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++..++..++||||++ ++|.+++.... .+++.....++.|++.||+|||+.   +|+|+||+|+||+++.++
T Consensus        82 iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~  156 (335)
T PTZ00024         82 IMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKG  156 (335)
T ss_pred             eeeeeEEEecCCcEEEEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCC
Confidence            7778888999999999999997 59999987544 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCC-------------CceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcC
Q 038002          551 RAKISDFGLAKLLMPNQ-------------TGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEV  616 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~  616 (702)
                      .++|+|||++.......             ........++..|+|||.+.+. .++.++|+||||+++|||++|..||..
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~  236 (335)
T PTZ00024        157 ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPG  236 (335)
T ss_pred             CEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            99999999998664111             1112233467889999988654 468999999999999999999999975


Q ss_pred             CCCCcchhhhHHHHHHhhhcc---cccc------------cccc---ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          617 NVSTADEVLLSTWVYNCFVAG---EFNK------------LVEE---EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       617 ~~~~~~~~~~~~~~~~~~~~~---~~~~------------~~~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .....   .+ ..+.......   .+..            ....   .........+.+++.+||+.+|++||+++|++.
T Consensus       237 ~~~~~---~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        237 ENEID---QL-GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             CCHHH---HH-HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            42211   11 1111100000   0000            0000   111223567889999999999999999999997


Q ss_pred             HH
Q 038002          679 ML  680 (702)
Q Consensus       679 ~L  680 (702)
                      .-
T Consensus       313 ~~  314 (335)
T PTZ00024        313 HE  314 (335)
T ss_pred             Cc
Confidence            43

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=6.3e-26  Score=231.06  Aligned_cols=219  Identities=22%  Similarity=0.207  Sum_probs=169.9

Q ss_pred             eEEEeEE--EEEeeeeh--hhhHhh----------------------------------eeeEEEEEe-cCCeeEEEEec
Q 038002          450 KLLTVLA--GCLGSITF--LCFLIA----------------------------------ISSLLVYKH-RSSKKLLVYEF  490 (702)
Q Consensus       450 ~l~~g~~--v~~~~~~~--~~~avk----------------------------------i~~l~~~~~-~~~~~~lV~e~  490 (702)
                      .+|+|+|  ||++-...  +.||||                                  |++++++|. +.+.++-|+||
T Consensus       470 LLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEY  549 (775)
T KOG1151|consen  470 LLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEY  549 (775)
T ss_pred             HhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeee
Confidence            4899999  88876544  778887                                  899998774 67788999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe---CCCcEEEecccceeecCCCC
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID---DSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |+|.+|+-+|+..+ .+++.++..|+.||+.||.||.+. ...|||-||||.|||+.   .-|.+||.|||+++++..+.
T Consensus       550 ceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddS  627 (775)
T KOG1151|consen  550 CEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDS  627 (775)
T ss_pred             cCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCc
Confidence            99999999998776 799999999999999999999986 55899999999999994   45789999999999986554


Q ss_pred             Cc------eeeceeccccccCccccc----CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcc
Q 038002          568 TG------IVAGVRGSRGYMAPEWQN----SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAG  637 (702)
Q Consensus       568 ~~------~~~~~~gt~~y~aPE~~~----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  637 (702)
                      ..      ......||..|++||.+.    ...++.|+||||+|||+|..+.|+.||.......+......    .+...
T Consensus       628 y~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNT----IlkAt  703 (775)
T KOG1151|consen  628 YNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENT----ILKAT  703 (775)
T ss_pred             cCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhc----hhcce
Confidence            32      234577999999999653    23678999999999999999999999986532221111100    01111


Q ss_pred             ccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          638 EFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       638 ~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ++..    ...+..+.+...+|++||++.-++|....++..
T Consensus       704 EVqF----P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  704 EVQF----PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             eccC----CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence            1111    122345667888999999999999988887754

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.92  E-value=1.8e-25  Score=229.89  Aligned_cols=190  Identities=23%  Similarity=0.333  Sum_probs=149.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFN---LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  547 (702)
                      |++++.++.+++..++||||+++++|.+++..   ....+++.++..++.|++.||+|||+.   +++|+||+|+||+++
T Consensus        64 i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~  140 (260)
T cd08222          64 IVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLK  140 (260)
T ss_pred             HHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEee
Confidence            44555666778889999999999999998864   234689999999999999999999999   999999999999997


Q ss_pred             CCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          548 DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      . +.++|+|||++........ ......+++.|+|||...+..++.++|+||||+++|+|++|..||....    .... 
T Consensus       141 ~-~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~----~~~~-  213 (260)
T cd08222         141 N-NLLKIGDFGVSRLLMGSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN----FLSV-  213 (260)
T ss_pred             c-CCEeecccCceeecCCCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHHH-
Confidence            5 5699999999987643322 2233557889999999888888999999999999999999999995331    1110 


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                         ......+.     .+..+......+.+++.+||+.+|++||+++|+++
T Consensus       214 ---~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         214 ---VLRIVEGP-----TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             ---HHHHHcCC-----CCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence               01111111     11223455678899999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.92  E-value=5.8e-26  Score=242.86  Aligned_cols=218  Identities=22%  Similarity=0.275  Sum_probs=173.3

Q ss_pred             cccccceEEEeEE--EEEeeeeh-----hhhHhh----------------------------eeeEEEEEecCCeeEEEE
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF-----LCFLIA----------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~-----~~~avk----------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +.+.-++||+|.|  |..|....     ..||||                            +++|++.-.+ ....+||
T Consensus       111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~  189 (1039)
T KOG0199|consen  111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF  189 (1039)
T ss_pred             HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence            3344568999998  67777664     678888                            7777776666 8889999


Q ss_pred             ecCCCCCHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          489 EFMSKGSLADLLFN-LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       489 e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |.++.|||.+.|.+ ....+.......++.||+.|++||..+   ++|||||-..|+|+...-.+||+|||+.+.+....
T Consensus       190 ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne  266 (1039)
T KOG0199|consen  190 ELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENE  266 (1039)
T ss_pred             hhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence            99999999999988 333577888899999999999999999   99999999999999999899999999999886554


Q ss_pred             Cc-eee-ceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          568 TG-IVA-GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       568 ~~-~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      .. ... ...-...|.|||.++...++.++|+|+|||++|||++ |+.||....    ...    +.+.+..++.   + 
T Consensus       267 d~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~----g~q----IL~~iD~~er---L-  334 (1039)
T KOG0199|consen  267 DMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR----GIQ----ILKNIDAGER---L-  334 (1039)
T ss_pred             cceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC----HHH----HHHhcccccc---C-
Confidence            42 222 2334567999999999999999999999999999998 889996541    111    1111111111   1 


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       ..+...++++.++++.||..+|++|||+..|.+
T Consensus       335 -pRPk~csedIY~imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  335 -PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             -CCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence             235567899999999999999999999999974

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.92  E-value=1.7e-25  Score=244.98  Aligned_cols=213  Identities=25%  Similarity=0.298  Sum_probs=165.2

Q ss_pred             cceEEEeE---EEEEeeeehhhhHhh-------------------------eeeEEEEEecCCeeEEEEecCCCCCHHHH
Q 038002          448 KRKLLTVL---AGCLGSITFLCFLIA-------------------------ISSLLVYKHRSSKKLLVYEFMSKGSLADL  499 (702)
Q Consensus       448 ~~~l~~g~---~v~~~~~~~~~~avk-------------------------i~~l~~~~~~~~~~~lV~e~~~~gsL~~~  499 (702)
                      ++.+|.|.   +||+|....+.||||                         |++++...++++..||..|.|.. +|.++
T Consensus       514 ~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL~dl  592 (903)
T KOG1027|consen  514 KEILGYGSNGTVVFRGVYEGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SLQDL  592 (903)
T ss_pred             HHHcccCCCCcEEEEEeeCCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hHHHH
Confidence            34455554   499999999999999                         99999999999999999999965 99999


Q ss_pred             hhcCCCC---CCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC---C--CcEEEecccceeecCCCCCce-
Q 038002          500 LFNLETR---PLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD---S--WRAKISDFGLAKLLMPNQTGI-  570 (702)
Q Consensus       500 l~~~~~~---~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~---~--~~~kl~Dfg~a~~~~~~~~~~-  570 (702)
                      +......   ......+.++.|+++||++||+-   +||||||||.||||+.   +  .+++|+|||+++.+..++... 
T Consensus       593 ie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~  669 (903)
T KOG1027|consen  593 IESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFS  669 (903)
T ss_pred             HhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhh
Confidence            9874111   11145577899999999999998   9999999999999965   3  469999999999887665432 


Q ss_pred             -eeceeccccccCcccccCCCCCccccccchhHhHHHhhhC-CcCCcCCCCCcchhhhHHHHHHhhhccccc-ccccccc
Q 038002          571 -VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICC-RSNFEVNVSTADEVLLSTWVYNCFVAGEFN-KLVEEEV  647 (702)
Q Consensus       571 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG-~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  647 (702)
                       .....||-+|+|||.+....-+.++||||+||++|..++| .+||...-..  +.+        +..++.. ..+.+  
T Consensus       670 r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R--~~N--------Il~~~~~L~~L~~--  737 (903)
T KOG1027|consen  670 RLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--QAN--------ILTGNYTLVHLEP--  737 (903)
T ss_pred             cccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh--hhh--------hhcCccceeeecc--
Confidence             3457799999999999988888899999999999999996 8999644111  111        1111110 01111  


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..+  .+..+||.+|+..+|..||++.+|+.
T Consensus       738 ~~d--~eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  738 LPD--CEAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             Cch--HHHHHHHHHhcCCCcccCCCHHHHhC
Confidence            111  17889999999999999999999874

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.92  E-value=3.5e-25  Score=237.67  Aligned_cols=203  Identities=19%  Similarity=0.225  Sum_probs=144.8

Q ss_pred             eeeEEEEEecC------CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKHRS------SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~~~------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |+++++++...      ...++|+||+.. +|.+++.   ..+++.++..++.|++.||+|||++   +|+||||||+||
T Consensus        76 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NI  148 (342)
T cd07879          76 VIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNL  148 (342)
T ss_pred             ccchhheecccccCCCCceEEEEeccccc-CHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHE
Confidence            55555555433      456999999964 7777652   2588999999999999999999999   999999999999


Q ss_pred             EEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcch
Q 038002          545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE  623 (702)
Q Consensus       545 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~  623 (702)
                      +++.++.+||+|||++......    .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... .
T Consensus       149 ll~~~~~~kL~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~  223 (342)
T cd07879         149 AVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-Q  223 (342)
T ss_pred             EECCCCCEEEeeCCCCcCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-H
Confidence            9999999999999998754221    223457889999998765 468899999999999999999999997542110 0


Q ss_pred             hhhHHHHH----------Hhhhccc-------cccccccc---cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--Hh
Q 038002          624 VLLSTWVY----------NCFVAGE-------FNKLVEEE---VDKITLERMVKTGLLCIQDEPNLRPSMKNVILM--LE  681 (702)
Q Consensus       624 ~~~~~~~~----------~~~~~~~-------~~~~~~~~---~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~--Le  681 (702)
                        ......          .......       ........   ..+.....+.+++.+||+.||++||++++++..  ++
T Consensus       224 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~  301 (342)
T cd07879         224 --LTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFD  301 (342)
T ss_pred             --HHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchh
Confidence              000000          0000000       00000000   011234568899999999999999999999954  77


Q ss_pred             CCcCCC
Q 038002          682 GTMEIP  687 (702)
Q Consensus       682 ~~~~~~  687 (702)
                      ...+.+
T Consensus       302 ~~~~~~  307 (342)
T cd07879         302 SFRDAD  307 (342)
T ss_pred             hccccc
Confidence            765543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.92  E-value=1.4e-25  Score=219.94  Aligned_cols=219  Identities=20%  Similarity=0.226  Sum_probs=151.7

Q ss_pred             eeeEEEEEec-CCeeEEEEecCCCCCHHHHhhcCC----CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEE
Q 038002          471 ISSLLVYKHR-SSKKLLVYEFMSKGSLADLLFNLE----TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL  545 (702)
Q Consensus       471 i~~l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIl  545 (702)
                      |+.|...|-+ +...+|++||.+. +|.++|+..+    ..++...+..|+.||+.|+.|||++   -|+||||||.|||
T Consensus        89 vi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIl  164 (438)
T KOG0666|consen   89 VISLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANIL  164 (438)
T ss_pred             chhHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEE
Confidence            4455433433 8999999999977 9999997543    2478889999999999999999999   9999999999999


Q ss_pred             EeCC----CcEEEecccceeecCCCCCc--eeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCC
Q 038002          546 IDDS----WRAKISDFGLAKLLMPNQTG--IVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNV  618 (702)
Q Consensus       546 l~~~----~~~kl~Dfg~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~  618 (702)
                      +..+    |++||+|+|+++++...-..  ....+.-|..|+|||.+.+ ..|+.+.|||++|||+.||++-++.|....
T Consensus       165 vmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E  244 (438)
T KOG0666|consen  165 VMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGRE  244 (438)
T ss_pred             EeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchh
Confidence            9776    89999999999988543322  2345678999999998765 578999999999999999999998886542


Q ss_pred             CCcch-----hhhHHHHHHhh---hcccccccc---------cc----ccC-----------HHHHHHHHHHHHHcccCC
Q 038002          619 STADE-----VLLSTWVYNCF---VAGEFNKLV---------EE----EVD-----------KITLERMVKTGLLCIQDE  666 (702)
Q Consensus       619 ~~~~~-----~~~~~~~~~~~---~~~~~~~~~---------~~----~~~-----------~~~~~~l~~li~~cL~~d  666 (702)
                      ...+.     ......+.+..   ....++.+.         ..    -.+           ....+...+|+.++|+.|
T Consensus       245 ~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yD  324 (438)
T KOG0666|consen  245 EKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYD  324 (438)
T ss_pred             hhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccC
Confidence            21111     11111111110   000111000         00    000           001223678889999999


Q ss_pred             CCCCCCHHHHHHHHhCCcCCCCCCCCCC
Q 038002          667 PNLRPSMKNVILMLEGTMEIPILAFPPL  694 (702)
Q Consensus       667 P~~RPt~~evl~~Le~~~~~~~p~~P~~  694 (702)
                      |.+|.|+++.++..=- .+.+.||.|..
T Consensus       325 P~kRIta~qAleh~yF-~~d~lpp~pt~  351 (438)
T KOG0666|consen  325 PIKRITAEQALEHPYF-TEDPLPPLPTS  351 (438)
T ss_pred             chhhccHHHHhccccc-ccCCCCCCccc
Confidence            9999999988764321 23445555543

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.92  E-value=2.5e-25  Score=252.02  Aligned_cols=183  Identities=25%  Similarity=0.372  Sum_probs=142.4

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccce
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA  560 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a  560 (702)
                      ...+||-||||+.-.|.+++..+...-.....+++++||++||+|+|++   |||||||||.||+++++..|||+|||+|
T Consensus       668 ~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLA  744 (1351)
T KOG1035|consen  668 PLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLA  744 (1351)
T ss_pred             ceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC---ceeeccCCcceeEEcCCCCeeecccccc
Confidence            4568999999999999999877653335778899999999999999999   9999999999999999999999999999


Q ss_pred             eecC-----------------CCCCceeeceeccccccCcccccCC---CCCccccccchhHhHHHhhhCCcCCcCCCCC
Q 038002          561 KLLM-----------------PNQTGIVAGVRGSRGYMAPEWQNSG---LITVKSDVYSFGVVLLEIICCRSNFEVNVST  620 (702)
Q Consensus       561 ~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~elltG~~Pf~~~~~~  620 (702)
                      ....                 .......+...||.-|+|||++.+.   .|+.|+|+||||||++||+   .||...+  
T Consensus       745 t~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsM--  819 (1351)
T KOG1035|consen  745 TDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEML---YPFGTSM--  819 (1351)
T ss_pred             hhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHh---ccCCchH--
Confidence            8721                 0111234567899999999988654   5999999999999999998   5675431  


Q ss_pred             cchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          621 ADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                           ....+....+.+.++..  +.........-.++|.+|++.||.+|||+.|+|.
T Consensus       820 -----ERa~iL~~LR~g~iP~~--~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  820 -----ERASILTNLRKGSIPEP--ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             -----HHHHHHHhcccCCCCCC--cccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence                 12223334445555444  2223334555678899999999999999999984

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.92  E-value=2.3e-25  Score=227.45  Aligned_cols=186  Identities=25%  Similarity=0.259  Sum_probs=149.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++.++..++||||+++++|.+++.... .+++.++..++.|++.||.|||+.   +++|+||+|+||+++.++
T Consensus        55 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~  130 (250)
T cd05123          55 IVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADG  130 (250)
T ss_pred             HHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCC
Confidence            4555677788999999999999999999997664 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .++|+|||++....... .......++..|+|||...+...+.++|+||||+++|++++|..||.....   ...     
T Consensus       131 ~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~-----  201 (250)
T cd05123         131 HIKLTDFGLAKELSSEG-SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEI-----  201 (250)
T ss_pred             cEEEeecCcceecccCC-CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHH-----
Confidence            99999999998764332 123345678899999999888889999999999999999999999964311   111     


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKN  675 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~e  675 (702)
                      ........      ...+......+.+++.+||..||++||++.+
T Consensus       202 ~~~~~~~~------~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         202 YEKILKDP------LRFPEFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHHHhcCC------CCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence            11111111      1222333677889999999999999999944

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.92  E-value=4.6e-25  Score=235.72  Aligned_cols=193  Identities=21%  Similarity=0.216  Sum_probs=139.0

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccce
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA  560 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a  560 (702)
                      ....++++||+. ++|.+++.... .+++.+++.++.||+.||+|||+.   +|+||||||+||+++.++.+||+|||++
T Consensus        78 ~~~~~~~~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a  152 (332)
T cd07857          78 FNELYLYEELME-ADLHQIIRSGQ-PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA  152 (332)
T ss_pred             CCcEEEEEeccc-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence            456789999986 68999986544 689999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCC---ceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH-------H
Q 038002          561 KLLMPNQT---GIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST-------W  629 (702)
Q Consensus       561 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~-------~  629 (702)
                      ........   .......|+..|+|||.+.+ ..++.++||||+|+++|+|++|..||..............       .
T Consensus       153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  232 (332)
T cd07857         153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE  232 (332)
T ss_pred             eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            86543221   11233568899999997755 5688999999999999999999999965421100000000       0


Q ss_pred             HHHhhhcc----------ccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 VYNCFVAG----------EFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 ~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ........          .................+.+++.+||+.||++|||++++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            00000000          00000000111123567889999999999999999999875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.92  E-value=7.2e-25  Score=235.28  Aligned_cols=205  Identities=20%  Similarity=0.225  Sum_probs=146.0

Q ss_pred             eeeEEEEEecCC------eeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKHRSS------KKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~~~~------~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |+++.+.+..+.      ..++||||+ +++|.+++..  ..+++..+..++.||++||+|||+.   +|+||||||+||
T Consensus        76 iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Ni  149 (343)
T cd07880          76 VIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNL  149 (343)
T ss_pred             ccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHE
Confidence            556666555443      469999999 7799998864  3688999999999999999999999   999999999999


Q ss_pred             EEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcch
Q 038002          545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE  623 (702)
Q Consensus       545 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~  623 (702)
                      +++.++.+||+|||++......    .....+++.|+|||.+.+ ..++.++|+||||+++|+|++|+.||.........
T Consensus       150 ll~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~  225 (343)
T cd07880         150 AVNEDCELKILDFGLARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQL  225 (343)
T ss_pred             EEcCCCCEEEeecccccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            9999999999999998765322    223456889999998765 45789999999999999999999999744211100


Q ss_pred             hhhHHH-------HHHhhhccc-------ccccccc---ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhCCc
Q 038002          624 VLLSTW-------VYNCFVAGE-------FNKLVEE---EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL--MLEGTM  684 (702)
Q Consensus       624 ~~~~~~-------~~~~~~~~~-------~~~~~~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~--~Le~~~  684 (702)
                      ......       .........       +......   .........+.+++.+||+.||++|||+.++++  .++...
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~  305 (343)
T cd07880         226 MEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH  305 (343)
T ss_pred             HHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence            000000       000000000       0000000   111233556889999999999999999999994  445443


Q ss_pred             C
Q 038002          685 E  685 (702)
Q Consensus       685 ~  685 (702)
                      +
T Consensus       306 ~  306 (343)
T cd07880         306 D  306 (343)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.92  E-value=8.8e-25  Score=253.29  Aligned_cols=87  Identities=33%  Similarity=0.419  Sum_probs=80.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++..++.||||||+++++|.+++.... .+++..++.++.||+.||+|||.+   +|+||||||+|||++.++
T Consensus        66 Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g  141 (669)
T cd05610          66 IVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEG  141 (669)
T ss_pred             cCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCC
Confidence            6677788888999999999999999999997654 678899999999999999999999   999999999999999999


Q ss_pred             cEEEeccccee
Q 038002          551 RAKISDFGLAK  561 (702)
Q Consensus       551 ~~kl~Dfg~a~  561 (702)
                      .+||+|||+++
T Consensus       142 ~vkL~DFGls~  152 (669)
T cd05610         142 HIKLTDFGLSK  152 (669)
T ss_pred             CEEEEeCCCCc
Confidence            99999999885

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.92  E-value=4.2e-25  Score=237.02  Aligned_cols=191  Identities=20%  Similarity=0.243  Sum_probs=134.9

Q ss_pred             CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe-CCCcEEEecccce
Q 038002          482 SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLA  560 (702)
Q Consensus       482 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~-~~~~~kl~Dfg~a  560 (702)
                      ...++||||++ ++|.+++...  .+++..+..++.||+.||+|||+.   +|+||||||+||+++ +++.+||+|||.+
T Consensus        89 ~~~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~dfg~~  162 (342)
T cd07854          89 NSVYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDFGLA  162 (342)
T ss_pred             ceEEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEECCcccc
Confidence            46899999997 5999888643  588999999999999999999999   999999999999997 4567899999999


Q ss_pred             eecCCCCC--ceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH-------H
Q 038002          561 KLLMPNQT--GIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW-------V  630 (702)
Q Consensus       561 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~-------~  630 (702)
                      ........  .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||...............       .
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  242 (342)
T cd07854         163 RIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREED  242 (342)
T ss_pred             eecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHH
Confidence            86532211  11122357889999997644 56788999999999999999999999644211110000000       0


Q ss_pred             HH--------hhh-ccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          631 YN--------CFV-AGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       631 ~~--------~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..        ... ...................+.+++.+||+.||++|||++|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         243 RNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             hhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence            00        000 0000000000111234567889999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.92  E-value=8.6e-25  Score=249.71  Aligned_cols=198  Identities=25%  Similarity=0.364  Sum_probs=160.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                      |+.+++....++..++|+||++.|+|.++|++.+               ..+...+.+.++.||+.|++||++.   +++
T Consensus       364 iv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~v  440 (609)
T KOG0200|consen  364 IVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCV  440 (609)
T ss_pred             hhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Ccc
Confidence            7888888878999999999999999999998776               3378889999999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeeceec--cccccCcccccCCCCCccccccchhHhHHHhhh-CCc
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRG--SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRS  612 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~  612 (702)
                      ||||-..|||+.++..+||+|||+++............-.+  ...|||||.+....|+.++|||||||+||||++ |..
T Consensus       441 HRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~  520 (609)
T KOG0200|consen  441 HRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGT  520 (609)
T ss_pred             chhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCC
Confidence            99999999999999999999999999765544443332222  345999999999999999999999999999998 888


Q ss_pred             CCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          613 NFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       613 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      |+... ....+      ..+....+..     .+.+....+++.++|+.||+.+|++||++.++++.++..
T Consensus       521 PYp~~-~~~~~------l~~~l~~G~r-----~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  521 PYPGI-PPTEE------LLEFLKEGNR-----MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             CCCCC-CcHHH------HHHHHhcCCC-----CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            88642 10111      1222222221     123444577888999999999999999999999999883

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.91  E-value=3.7e-25  Score=237.54  Aligned_cols=186  Identities=20%  Similarity=0.256  Sum_probs=137.4

Q ss_pred             eeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          483 KKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       483 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      ..++|+||+ +++|.+++...  .+++.++..++.|+++||+|||+.   +|+|+||||+||+++.++.+||+|||++..
T Consensus        94 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~  167 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARH  167 (343)
T ss_pred             cEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccccc
Confidence            489999999 67999998753  689999999999999999999999   999999999999999999999999999986


Q ss_pred             cCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH-------HHHhh
Q 038002          563 LMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW-------VYNCF  634 (702)
Q Consensus       563 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~-------~~~~~  634 (702)
                      ....    .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+...       ....+
T Consensus       168 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  243 (343)
T cd07851         168 TDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKI  243 (343)
T ss_pred             cccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Confidence            5332    223457888999998755 46789999999999999999999999644211100000000       00000


Q ss_pred             hccccccccc-------c---ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          635 VAGEFNKLVE-------E---EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       635 ~~~~~~~~~~-------~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ........+.       .   ......+..+.+++.+||+.||++|||+++|++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         244 SSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             cchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence            0000000000       0   011123678999999999999999999999986

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.91  E-value=1.1e-24  Score=232.35  Aligned_cols=199  Identities=24%  Similarity=0.272  Sum_probs=144.7

Q ss_pred             eeeEEEEEec-CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHR-SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++...+.. +...++||||+ +++|.+++...  .+++..+..++.|+++||+|||+.   +|+|+||+|+||+++++
T Consensus        71 iv~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~  144 (328)
T cd07856          71 IISLSDIFISPLEDIYFVTELL-GTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINEN  144 (328)
T ss_pred             eeeEeeeEecCCCcEEEEeehh-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCC
Confidence            6777777654 67899999998 56999888643  477888889999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.++|+|||.+......    .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...........+.+
T Consensus       145 ~~~~l~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~  220 (328)
T cd07856         145 CDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITD  220 (328)
T ss_pred             CCEEeCccccccccCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            99999999998754221    123456888999998765 5789999999999999999999999965421110000000


Q ss_pred             HH-------HHhhhcccccccc----c------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          629 WV-------YNCFVAGEFNKLV----E------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       629 ~~-------~~~~~~~~~~~~~----~------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ..       .............    .      .+..+.....+.+++.+||+.+|++||++++++..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         221 LLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             HhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00       0000000000000    0      01111235788999999999999999999998765

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.91  E-value=2.5e-24  Score=207.93  Aligned_cols=167  Identities=22%  Similarity=0.216  Sum_probs=127.8

Q ss_pred             CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeec
Q 038002          494 GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG  573 (702)
Q Consensus       494 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  573 (702)
                      |+|.+++...+..+++.+++.++.||++||+|||++   +      ||+||+++.++.+|+  ||++.......      
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------   63 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ------   63 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc------
Confidence            689999987665799999999999999999999998   5      999999999999999  99998754322      


Q ss_pred             eeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHH
Q 038002          574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLE  653 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  653 (702)
                      ..|++.|+|||++.+..++.++|||||||++|||++|+.||........  .... .........   ............
T Consensus        64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~--~~~~-~~~~~~~~~---~~~~~~~~~~~~  137 (176)
T smart00750       64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA--ILEI-LLNGMPADD---PRDRSNLESVSA  137 (176)
T ss_pred             CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH--HHHH-HHHHhccCC---ccccccHHHHHh
Confidence            2578999999999999999999999999999999999999964321111  1111 111111100   000011222333


Q ss_pred             --HHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          654 --RMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       654 --~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                        .+.+++.+||+.||++||++.|+++.+...
T Consensus       138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      138 ARSFADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             hhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence              689999999999999999999999988653

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.91  E-value=3.7e-24  Score=229.97  Aligned_cols=199  Identities=20%  Similarity=0.228  Sum_probs=141.3

Q ss_pred             eeeEEEEEec------CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKHR------SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~~------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |+++...+..      ....+++++++ +++|.+++...  .+++..+..++.|+++||+|||++   +|+|+||||+||
T Consensus        78 iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NI  151 (345)
T cd07877          78 VIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNL  151 (345)
T ss_pred             ccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHE
Confidence            5555554432      34578888887 78999888643  588999999999999999999999   999999999999


Q ss_pred             EEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcch
Q 038002          545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE  623 (702)
Q Consensus       545 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~  623 (702)
                      +++.++.+||+|||++......    .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.........
T Consensus       152 ll~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~  227 (345)
T cd07877         152 AVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL  227 (345)
T ss_pred             EEcCCCCEEEeccccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            9999999999999998764321    223457889999998765 56889999999999999999999999643211100


Q ss_pred             hhhHHH-------HHHhhhccc-------ccccccc---ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          624 VLLSTW-------VYNCFVAGE-------FNKLVEE---EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       624 ~~~~~~-------~~~~~~~~~-------~~~~~~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ......       .........       +......   .........+.+++.+||+.||.+||++.++++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         228 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            000000       000000000       0000000   0001134568899999999999999999998874

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=2.4e-24  Score=222.94  Aligned_cols=101  Identities=27%  Similarity=0.261  Sum_probs=86.6

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------------eeeEEEEEe----c
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------------ISSLLVYKH----R  480 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------------i~~l~~~~~----~  480 (702)
                      ..|...++||-|-|  |+++....  +.||+|                                  |++|+.+|.    +
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpN  157 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPN  157 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCC
Confidence            55667788888888  88887665  677776                                  888887765    5


Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI  546 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  546 (702)
                      +.++++|+|++ |-+|..+|.... ..++...+.+|++||+.||.|||.+|  ||||.||||+|||+
T Consensus       158 G~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl  221 (590)
T KOG1290|consen  158 GQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL  221 (590)
T ss_pred             CcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence            88999999999 778988887654 35999999999999999999999997  99999999999999

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.91  E-value=1.9e-25  Score=242.77  Aligned_cols=222  Identities=25%  Similarity=0.308  Sum_probs=177.8

Q ss_pred             ccceEEEeEE--EEEeeeeh------hhhHhh----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          447 DKRKLLTVLA--GCLGSITF------LCFLIA----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~~------~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      ..++||.|+|  ||+|...-      .+||+|                            +++|++...... ..||++|
T Consensus       700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~  778 (1177)
T KOG1025|consen  700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL  778 (1177)
T ss_pred             hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence            3468999988  99888642      577776                            555555555444 8999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      ++.|.|.++++.++..+-....+.|..||++||.|||++   +++||||-..||||..-..+||.|||+++....+....
T Consensus       779 mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey  855 (1177)
T KOG1025|consen  779 MPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY  855 (1177)
T ss_pred             cccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence            999999999999888899999999999999999999999   99999999999999999999999999999886655432


Q ss_pred             e-eceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          571 V-AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       571 ~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                      . ....-.+.|||-|.+....++.++|||||||++||++| |..|++.....  +      +...+..++.  +   +.+
T Consensus       856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~--e------I~dlle~geR--L---sqP  922 (1177)
T KOG1025|consen  856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE--E------IPDLLEKGER--L---SQP  922 (1177)
T ss_pred             cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH--H------hhHHHhcccc--C---CCC
Confidence            2 22334567999999999999999999999999999998 99999755111  1      1111111211  1   335


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      +....++..++.+||..|++.||+++++...+.....
T Consensus       923 piCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar  959 (1177)
T KOG1025|consen  923 PICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR  959 (1177)
T ss_pred             CCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence            5667788899999999999999999999998876543

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.91  E-value=2.8e-26  Score=220.53  Aligned_cols=196  Identities=25%  Similarity=0.279  Sum_probs=154.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhc----CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFN----LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI  546 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  546 (702)
                      |+++++..-.++..++.||.|+- ||+.+.+.    ...++++...-+|..-.+.||.||.+.  ..|||||+||+|||+
T Consensus       125 IVkfyGa~F~EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILl  201 (361)
T KOG1006|consen  125 IVKFYGALFSEGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILL  201 (361)
T ss_pred             HHHHhhhhhcCCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEE
Confidence            88888888889999999999954 77766532    234688888889999999999999887  489999999999999


Q ss_pred             eCCCcEEEecccceeecCCCCCceeeceeccccccCcccccC--CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          547 DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS--GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       547 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      +..|.+||+|||.+-.+...-  ..+.-.|-.+|||||.+..  ..|+.++|+||||++|||+.||..|+....+.-+  
T Consensus       202 dr~G~vKLCDFGIcGqLv~Si--AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfe--  277 (361)
T KOG1006|consen  202 DRHGDVKLCDFGICGQLVDSI--AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFE--  277 (361)
T ss_pred             ecCCCEeeecccchHhHHHHH--HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHH--
Confidence            999999999999987653322  2334467889999997743  3589999999999999999999999975422111  


Q ss_pred             hhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                           .......++.+.+....-..+.+..+.+++.-||.+|-.+||...++.+
T Consensus       278 -----ql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  278 -----QLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             -----HHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence                 1122344555555555445567888999999999999999999998875

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=99.91  E-value=7e-24  Score=188.81  Aligned_cols=111  Identities=30%  Similarity=0.457  Sum_probs=97.1

Q ss_pred             ccccCCCCeeEcCCCeEEEEEEeCCC-ceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEcCCCCeeee
Q 038002           35 SLSPSGQHSWNSSSGLFQFGFYKQGS-GYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPI  113 (702)
Q Consensus        35 ~l~~~~~~~~~s~~g~f~lgF~~~~~-~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~~~~~~~w~  113 (702)
                      .|..+  +.|+|+++.|++|||.... ..+++|||++.+ +++||.||++.|+.. .+.|.|+.||+|+|++.+|.++|+
T Consensus         3 ~l~~~--~~l~s~~~~f~~G~~~~~~q~dgnlV~~~~~~-~~~vW~snt~~~~~~-~~~l~l~~dGnLvl~~~~g~~vW~   78 (114)
T smart00108        3 TLSSG--QTLVSGNSLFELGFFTLIMQNDYNLILYKSSS-RTVVWVANRDNPVSD-SCTLTLQSDGNLVLYDGDGRVVWS   78 (114)
T ss_pred             ccCCC--CEEecCCCcEeeeccccCCCCCEEEEEEECCC-CcEEEECCCCCCCCC-CEEEEEeCCCCEEEEeCCCCEEEE
Confidence            45444  7899999999999999554 488999999887 889999999988743 489999999999999999999999


Q ss_pred             eccccCCcceeEEEecCcCEEEeecCCceEeeecCC
Q 038002          114 ADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFST  149 (702)
Q Consensus       114 ~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~  149 (702)
                      |++....+..+|+|+|+|||||++..+.+|||||||
T Consensus        79 S~t~~~~~~~~~~L~ddGnlvl~~~~~~~~W~Sf~~  114 (114)
T smart00108       79 SNTTGANGNYVLVLLDDGNLVIYDSDGNFLWQSFDY  114 (114)
T ss_pred             ecccCCCCceEEEEeCCCCEEEECCCCCEEeCCCCC
Confidence            988534567889999999999999999999999997

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=1.2e-25  Score=214.49  Aligned_cols=194  Identities=19%  Similarity=0.256  Sum_probs=144.8

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccce
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA  560 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a  560 (702)
                      ...+|+||++|+. +|..+|.+...+++..++.+++.++..||.|+|..   .|+|||+||+|+||+.++.+||+|||++
T Consensus        96 r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGla  171 (376)
T KOG0669|consen   96 RATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLA  171 (376)
T ss_pred             cceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccc
Confidence            5568999999976 99999988877899999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCC---ceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhc
Q 038002          561 KLLMPNQT---GIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVA  636 (702)
Q Consensus       561 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~  636 (702)
                      +.+.....   ...+....|..|++||.+.+ +.|+++.|||..|||+.||+++.+.+...... .+..+.......+..
T Consensus       172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteq-qql~~Is~LcGs~tk  250 (376)
T KOG0669|consen  172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQ-QQLHLISQLCGSITK  250 (376)
T ss_pred             cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHH-HHHHHHHHHhccCCc
Confidence            76643322   22344566999999997654 68999999999999999999999998765221 122111111111111


Q ss_pred             cccccc--------c-----cc---ccCHHH------HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          637 GEFNKL--------V-----EE---EVDKIT------LERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       637 ~~~~~~--------~-----~~---~~~~~~------~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ..++..        +     .+   ..-.+.      .++..+++.++|..||.+||++++++..
T Consensus       251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence            111100        0     00   000111      2367788999999999999999988754

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.90  E-value=2.2e-24  Score=255.98  Aligned_cols=180  Identities=18%  Similarity=0.162  Sum_probs=130.5

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC------------
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD------------  548 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~------------  548 (702)
                      ...+++++|++ +++|.++|......+++.+++.++.||++||+|||++   ||+||||||+||||+.            
T Consensus        52 ~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---gIvHrDlKP~NiLl~~~~~~k~~d~~~~  127 (793)
T PLN00181         52 DDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ---GIVVHNVRPSCFVMSSFNHVSFIESASC  127 (793)
T ss_pred             cchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC---CeeeccCCchhEEEcccCcEEEeecccc
Confidence            45678888987 5699999987655689999999999999999999999   9999999999999954            


Q ss_pred             -------CCcEEEecccceeecCCCCC---------------ceeeceeccccccCcccccCCCCCccccccchhHhHHH
Q 038002          549 -------SWRAKISDFGLAKLLMPNQT---------------GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLE  606 (702)
Q Consensus       549 -------~~~~kl~Dfg~a~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e  606 (702)
                             ++.+||+|||+++.......               .......||+.|+|||++.+..++.++|||||||+|||
T Consensus       128 ~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~E  207 (793)
T PLN00181        128 SDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFE  207 (793)
T ss_pred             CcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHH
Confidence                   44556666666653211000               00011357888999999998899999999999999999


Q ss_pred             hhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          607 IICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       607 lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      |++|..|+....     ......     .....    .+. ..........++.+||+.||.+||++.|+++.
T Consensus       208 Ll~~~~~~~~~~-----~~~~~~-----~~~~~----~~~-~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h  265 (793)
T PLN00181        208 LFCPVSSREEKS-----RTMSSL-----RHRVL----PPQ-ILLNWPKEASFCLWLLHPEPSCRPSMSELLQS  265 (793)
T ss_pred             HhhCCCchhhHH-----HHHHHH-----HHhhc----Chh-hhhcCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence            999988874220     011110     00000    110 01123345678889999999999999999863

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.90  E-value=2.7e-24  Score=195.33  Aligned_cols=202  Identities=20%  Similarity=0.218  Sum_probs=152.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..-+.++..-||+|||.. +|..+.......++.+.+..++.|+++||.|+|++   +++||||||.|.|++.+|
T Consensus        63 ivrl~dvlhsdkkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ng  138 (292)
T KOG0662|consen   63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNG  138 (292)
T ss_pred             eeehhhhhccCceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCC
Confidence            88898888899999999999965 89999988877899999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      .+|++|||+++.++-.-. ......-|..|.+|.++.+ +.|+...|+||-|||+.|+.. |++.|... ...++....-
T Consensus       139 elkladfglarafgipvr-cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~-dvddqlkrif  216 (292)
T KOG0662|consen  139 ELKLADFGLARAFGIPVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-DVDDQLKRIF  216 (292)
T ss_pred             cEEecccchhhhcCCceE-eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC-cHHHHHHHHH
Confidence            999999999998754332 2233456889999998866 478999999999999999987 55555443 3333332222


Q ss_pred             HHHHhhhcccccccc---cc-------------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          629 WVYNCFVAGEFNKLV---EE-------------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~---~~-------------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      +......+..++.+-   +-             .+-+.....=++++.+.|.-+|.+|.++++.++
T Consensus       217 ~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  217 RLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             HHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence            222222222222111   10             111222334467777888999999999998875

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.90  E-value=1.2e-23  Score=232.24  Aligned_cols=192  Identities=20%  Similarity=0.113  Sum_probs=132.5

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEec
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLE-----------------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHC  537 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~  537 (702)
                      ++..+|||||+++++|.++++...                       ...++..+..++.|++.+|+|||+.   +|+||
T Consensus       257 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHr  333 (507)
T PLN03224        257 KGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRI---GIVHR  333 (507)
T ss_pred             CCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHC---CeecC
Confidence            356899999999999999986421                       1235677888999999999999999   99999


Q ss_pred             CCCCCcEEEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCC--------------------C--Cccc
Q 038002          538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL--------------------I--TVKS  595 (702)
Q Consensus       538 dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--------------------~--~~~~  595 (702)
                      ||||+||+++.++.+||+|||++...............+++.|+|||.+....                    +  ..+.
T Consensus       334 DLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~  413 (507)
T PLN03224        334 DIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLF  413 (507)
T ss_pred             CCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCcc
Confidence            99999999999999999999999765332221112223478999999775322                    1  1347


Q ss_pred             cccchhHhHHHhhhCCc-CCcCCCCCcchhhhHH---HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCC---C
Q 038002          596 DVYSFGVVLLEIICCRS-NFEVNVSTADEVLLST---WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEP---N  668 (702)
Q Consensus       596 DiwSlGvil~elltG~~-Pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP---~  668 (702)
                      ||||+||++|+|+++.. |+........+.....   ..+........    +-.......+...+++.+||..+|   .
T Consensus       414 DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~----~~~~~d~~s~~~~dLi~~LL~~~~~~~~  489 (507)
T PLN03224        414 DSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKY----DFSLLDRNKEAGWDLACKLITKRDQANR  489 (507)
T ss_pred             chhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCC----CcccccccChHHHHHHHHHhccCCCCcc
Confidence            99999999999999875 6643211111100000   01111111111    111223346778889999999766   6


Q ss_pred             CCCCHHHHHHH
Q 038002          669 LRPSMKNVILM  679 (702)
Q Consensus       669 ~RPt~~evl~~  679 (702)
                      +|+|++|+++.
T Consensus       490 ~RlSa~eaL~H  500 (507)
T PLN03224        490 GRLSVGQALSH  500 (507)
T ss_pred             cCCCHHHHhCC
Confidence            89999999863

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1e-23  Score=216.47  Aligned_cols=234  Identities=22%  Similarity=0.225  Sum_probs=173.1

Q ss_pred             cceEEEeEE--EEEeeeehhhhHhhee--------------------------eEEEEEec----CCeeEEEEecCCCCC
Q 038002          448 KRKLLTVLA--GCLGSITFLCFLIAIS--------------------------SLLVYKHR----SSKKLLVYEFMSKGS  495 (702)
Q Consensus       448 ~~~l~~g~~--v~~~~~~~~~~avki~--------------------------~l~~~~~~----~~~~~lV~e~~~~gs  495 (702)
                      .+.+|+|-|  |.+|..+...|||||-                          .++..-..    -.+++||++|.+.||
T Consensus       216 ~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GS  295 (513)
T KOG2052|consen  216 QEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGS  295 (513)
T ss_pred             EEEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCc
Confidence            467899988  9999999999999932                          22211111    347899999999999


Q ss_pred             HHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhc-----CCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc-
Q 038002          496 LADLLFNLETRPLWRDRVRIALDVARGLLYLHDE-----CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG-  569 (702)
Q Consensus       496 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-----~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-  569 (702)
                      |.|+|...  .++.+..++++..++.||++||..     ..+.|.|||||..|||+..++...|+|+|+|......... 
T Consensus       296 L~DyL~r~--tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~i  373 (513)
T KOG2052|consen  296 LYDYLNRN--TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTI  373 (513)
T ss_pred             HHHHHhhc--cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcc
Confidence            99999763  689999999999999999999975     3568999999999999999999999999999887554322 


Q ss_pred             --eeeceeccccccCcccccCCC----C--CccccccchhHhHHHhhhC----------CcCCcCCCCCcchhhhHHHHH
Q 038002          570 --IVAGVRGSRGYMAPEWQNSGL----I--TVKSDVYSFGVVLLEIICC----------RSNFEVNVSTADEVLLSTWVY  631 (702)
Q Consensus       570 --~~~~~~gt~~y~aPE~~~~~~----~--~~~~DiwSlGvil~elltG----------~~Pf~~~~~~~~~~~~~~~~~  631 (702)
                        .....+||.+|||||++....    +  -..+||||||.++||++..          +.||......+...   +...
T Consensus       374 di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~---eeMr  450 (513)
T KOG2052|consen  374 DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSF---EEMR  450 (513)
T ss_pred             cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCH---HHHh
Confidence              123567999999999885431    1  1468999999999999742          36665432221110   0011


Q ss_pred             Hhhhcccccccccc-ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCC
Q 038002          632 NCFVAGEFNKLVEE-EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEI  686 (702)
Q Consensus       632 ~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~  686 (702)
                      ...-...+...++. -...+....+.++|+.||..+|.-|-|+-.+-+.|.++.+.
T Consensus       451 kVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~  506 (513)
T KOG2052|consen  451 KVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS  506 (513)
T ss_pred             cceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence            11112222222222 23456788999999999999999999999999999887643

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.89  E-value=4.8e-23  Score=226.90  Aligned_cols=193  Identities=24%  Similarity=0.284  Sum_probs=152.3

Q ss_pred             eeeEEEEEe-----cCCeeEEEEecCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKH-----RSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~-----~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      ++.++++|.     .++.++||||||.+||..|+++.. +.++.|..+..|++.++.|+.+||.+   .++|||||-.||
T Consensus        78 v~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~Ni  154 (953)
T KOG0587|consen   78 VATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNV  154 (953)
T ss_pred             cceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceE
Confidence            555554443     388999999999999999999865 34688999999999999999999999   999999999999


Q ss_pred             EEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccC-----CCCCccccccchhHhHHHhhhCCcCCcCCCC
Q 038002          545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-----GLITVKSDVYSFGVVLLEIICCRSNFEVNVS  619 (702)
Q Consensus       545 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~  619 (702)
                      |++.++.+||+|||.+..+.... .......||+.|||||++.-     ..|+.++|+||||++..||.-|.+|+.....
T Consensus       155 LLT~e~~VKLvDFGvSaQldsT~-grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP  233 (953)
T KOG0587|consen  155 LLTENAEVKLVDFGVSAQLDSTV-GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP  233 (953)
T ss_pred             EEeccCcEEEeeeeeeeeeeccc-ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch
Confidence            99999999999999998764322 23445779999999998742     3577899999999999999999999964422


Q ss_pred             CcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          620 TADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..        +.-.+.+..-+.+   .-+..-++++.++|..||..|.++||++.++++
T Consensus       234 mr--------aLF~IpRNPPPkL---krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  234 MR--------ALFLIPRNPPPKL---KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             hh--------hhccCCCCCCccc---cchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            11        0000111111111   125567889999999999999999999998875

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.89  E-value=3.1e-23  Score=209.65  Aligned_cols=191  Identities=26%  Similarity=0.303  Sum_probs=150.2

Q ss_pred             eeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCc
Q 038002          472 SSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWR  551 (702)
Q Consensus       472 ~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~  551 (702)
                      +++.+.+......+++|||+++++|.+++.... .+++..+..++.++++++.+||+.   +++|+||+|+||+++.++.
T Consensus        50 ~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~  125 (244)
T smart00220       50 VRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRG-RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGH  125 (244)
T ss_pred             HHHHhheeeCCEEEEEEeCCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCc
Confidence            445556667789999999999999999997654 388999999999999999999999   9999999999999999999


Q ss_pred             EEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHH
Q 038002          552 AKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVY  631 (702)
Q Consensus       552 ~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~  631 (702)
                      ++|+|||.+.......  ......++..|++||.+....++.++||||||+++++|++|..||......   ...    .
T Consensus       126 ~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~---~~~----~  196 (244)
T smart00220      126 VKLADFGLARQLDPGG--LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL---LEL----F  196 (244)
T ss_pred             EEEccccceeeecccc--ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH---HHH----H
Confidence            9999999998764432  233455788999999998888899999999999999999999999653111   111    1


Q ss_pred             HhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          632 NCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       632 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ...........   .........+.+++.+||..+|++||++.++++
T Consensus       197 ~~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      197 KKIGKPKPPFP---PPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHhccCCCCc---cccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            11111111100   000014568889999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.89  E-value=9.5e-24  Score=196.22  Aligned_cols=142  Identities=30%  Similarity=0.386  Sum_probs=120.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFN---LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  547 (702)
                      ++.+++...++...++.||.|.. ||+.+-.+   .+...++...-+|+..+++||.|||++  ..+||||+||+|||++
T Consensus       107 ~V~FyGa~~regdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn  183 (282)
T KOG0984|consen  107 TVHFYGALFREGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILIN  183 (282)
T ss_pred             EEEeehhhhccccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEc
Confidence            67888888889999999999965 88776543   344688899999999999999999998  6999999999999999


Q ss_pred             CCCcEEEecccceeecCCCCCceeeceeccccccCccccc----CCCCCccccccchhHhHHHhhhCCcCCcCC
Q 038002          548 DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN----SGLITVKSDVYSFGVVLLEIICCRSNFEVN  617 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DiwSlGvil~elltG~~Pf~~~  617 (702)
                      .+|++|++|||.+-.+...-.  .+--.|-..|+|||.+.    ...|+-++||||||+.+.||.+++.||+..
T Consensus       184 ~~GqVKiCDFGIsG~L~dSiA--kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  184 YDGQVKICDFGISGYLVDSIA--KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             cCCcEEEcccccceeehhhhH--HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence            999999999999987643322  12234778999999764    347899999999999999999999999765

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.88  E-value=1.7e-23  Score=217.57  Aligned_cols=228  Identities=18%  Similarity=0.126  Sum_probs=168.9

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------------eeeEEEEEecCCeeEEE
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      .|......|+|.|  |+.+....  ..||||                                +++|+-.|...+++|||
T Consensus       433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClV  512 (752)
T KOG0670|consen  433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLV  512 (752)
T ss_pred             eeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEE
Confidence            3444556788888  77776554  678887                                44555667779999999


Q ss_pred             EecCCCCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC-CcEEEecccceeecC
Q 038002          488 YEFMSKGSLADLLFNLET--RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS-WRAKISDFGLAKLLM  564 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Dfg~a~~~~  564 (702)
                      +|-+ ..+|.+.|++.+.  .+....+..++.|+..||..|...   ||+|.||||+|||+++. ..+||||||.|....
T Consensus       513 FE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~  588 (752)
T KOG0670|consen  513 FEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGSASFAS  588 (752)
T ss_pred             ehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCccccccc
Confidence            9999 4599999988764  377889999999999999999998   99999999999999765 468999999998764


Q ss_pred             CCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh--------------HHHH
Q 038002          565 PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL--------------STWV  630 (702)
Q Consensus       565 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~--------------~~~~  630 (702)
                      .+.   .+....+..|.|||++.+.+|+...|+||+||.||||.||+..|.+.....--...              ..+.
T Consensus       589 ene---itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~  665 (752)
T KOG0670|consen  589 ENE---ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFK  665 (752)
T ss_pred             ccc---ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchh
Confidence            433   34455677899999999999999999999999999999999999765221100000              0000


Q ss_pred             HHhh--------------hccc---ccccccc---------------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          631 YNCF--------------VAGE---FNKLVEE---------------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       631 ~~~~--------------~~~~---~~~~~~~---------------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .+++              ...+   +...+.+               .-.......+.+|+..||..||++|.|..+.|+
T Consensus       666 dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  666 DQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK  745 (752)
T ss_pred             hhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence            0000              0000   0000000               123456778999999999999999999999875

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.87  E-value=5.7e-23  Score=203.10  Aligned_cols=191  Identities=23%  Similarity=0.219  Sum_probs=144.5

Q ss_pred             cCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccc
Q 038002          480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGL  559 (702)
Q Consensus       480 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~  559 (702)
                      +....|+|||+|. .+|.+.+.   ..++-+.+..++.|++.|++|||+.   ||+||||||+||++..+..+||.|||+
T Consensus        92 ~~~e~y~v~e~m~-~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~  164 (369)
T KOG0665|consen   92 EFQEVYLVMELMD-ANLCQVIL---MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGL  164 (369)
T ss_pred             HHHhHHHHHHhhh-hHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchh
Confidence            3567899999995 48998886   2577788899999999999999999   999999999999999999999999999


Q ss_pred             eeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH----------
Q 038002          560 AKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW----------  629 (702)
Q Consensus       560 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~----------  629 (702)
                      |+.-...  ...+....+..|.|||++.+-.+.+.+||||+||++.||++|..-|.+....+.-....+.          
T Consensus       165 ar~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~  242 (369)
T KOG0665|consen  165 ARTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMK  242 (369)
T ss_pred             hcccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHH
Confidence            9864332  3566778899999999998888999999999999999999999998754221110000000          


Q ss_pred             ---------HH--Hhhhcccccccccc-------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          630 ---------VY--NCFVAGEFNKLVEE-------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       630 ---------~~--~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                               ..  +....-.+...+..       +.++.....+.+++.+||..||++|.+++++|+.
T Consensus       243 qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  243 QLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             HhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence                     00  00000111111111       2233446678899999999999999999999985

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=8.3e-24  Score=203.82  Aligned_cols=193  Identities=20%  Similarity=0.244  Sum_probs=142.4

Q ss_pred             CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          482 SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       482 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      .++|+|+|.|. .+|..+|-... .++...+.-+++||++||+|||+.   +|+||||||.|.|++.+-.+||+|||+++
T Consensus       130 qEiYV~TELmQ-SDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLAR  204 (449)
T KOG0664|consen  130 QELYVLTELMQ-SDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLAR  204 (449)
T ss_pred             HHHHHHHHHHH-hhhhheeccCC-CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccccccc
Confidence            35678888884 47877776543 678888888999999999999999   99999999999999999999999999999


Q ss_pred             ecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH-----------
Q 038002          562 LLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW-----------  629 (702)
Q Consensus       562 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~-----------  629 (702)
                      ....+.....+...-|..|.|||++.+ +.|+.+.||||.|||+.||+-.+..|...... ++..+...           
T Consensus       205 vee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi-qQL~lItdLLGTPs~EaMr  283 (449)
T KOG0664|consen  205 TWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI-EQLQMIIDLLGTPSQEAMK  283 (449)
T ss_pred             ccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH-HHHHHHHHHhCCCcHHHHH
Confidence            877666666677778999999998876 57999999999999999999888888654222 22111110           


Q ss_pred             -----HHHhhhcc-----ccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038002          630 -----VYNCFVAG-----EFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML  680 (702)
Q Consensus       630 -----~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  680 (702)
                           ....+.++     .+..+..-.-+.....+...+...++..||++|.+.++.+..+
T Consensus       284 ~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~  344 (449)
T KOG0664|consen  284 YACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR  344 (449)
T ss_pred             HHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence                 01111111     1111111111223344566777789999999999999988765

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.86  E-value=2.6e-22  Score=211.39  Aligned_cols=138  Identities=25%  Similarity=0.291  Sum_probs=125.4

Q ss_pred             eeeEEEEEecCCeeEEEEecC-CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFM-SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~-~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |++++.+|++++.+||+||-. ++.+|.++|.... ++++.++..|+.|++.|+++||++   ||||||||-+|+.++.+
T Consensus       631 IlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~  706 (772)
T KOG1152|consen  631 ILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSN  706 (772)
T ss_pred             hhhhhheeecCCeeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecC
Confidence            899999999999999999987 6779999997665 899999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCC-CccccccchhHhHHHhhhCCcCCc
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLI-TVKSDVYSFGVVLLEIICCRSNFE  615 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltG~~Pf~  615 (702)
                      |.+||+|||.+......+   ...++||..|.|||++.+..| ...-|||++|++||.++..+.||.
T Consensus       707 g~~klidfgsaa~~ksgp---fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  707 GFVKLIDFGSAAYTKSGP---FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             CeEEEeeccchhhhcCCC---cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            999999999998764333   456789999999999998876 466799999999999999999985

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.86  E-value=1.3e-21  Score=197.45  Aligned_cols=191  Identities=22%  Similarity=0.276  Sum_probs=150.3

Q ss_pred             EEEecCCeeEEEEecCCCCCHHHHhhc-----CC--CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          476 VYKHRSSKKLLVYEFMSKGSLADLLFN-----LE--TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       476 ~~~~~~~~~~lV~e~~~~gsL~~~l~~-----~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      ..-++...++++|.++.-|+|..+|..     ..  ..++..+...++.|++.|++|||++   +|||.||...|.+||+
T Consensus       355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd  431 (563)
T KOG1024|consen  355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDD  431 (563)
T ss_pred             EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehh
Confidence            455678899999999999999999982     21  2356677888999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCceee-ceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhh
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVA-GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLL  626 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~  626 (702)
                      .-++||+|-.+++.+......... ....+..||+||.+.+..|+.++|+|||||++|||+| |+.|+...+..+     
T Consensus       432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE-----  506 (563)
T KOG1024|consen  432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE-----  506 (563)
T ss_pred             heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-----
Confidence            999999999999866544332222 2234568999999999999999999999999999998 889985431111     


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                         .....+.+.     .-..+.+.++++..++.-||...|++||+++|++.-|.+
T Consensus       507 ---m~~ylkdGy-----RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse  554 (563)
T KOG1024|consen  507 ---MEHYLKDGY-----RLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSE  554 (563)
T ss_pred             ---HHHHHhccc-----eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence               111111111     112345567889999999999999999999999998864

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.86  E-value=4e-21  Score=189.24  Aligned_cols=161  Identities=36%  Similarity=0.542  Sum_probs=140.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC-C
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD-S  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~-~  549 (702)
                      |.+++.++......+++||++++++|.+++......+++..+..++.++++++++||+.   +++|+||+|.||+++. +
T Consensus        53 i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~  129 (215)
T cd00180          53 IVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDN  129 (215)
T ss_pred             eeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCC
Confidence            77888888888999999999999999999987644688999999999999999999999   9999999999999999 8


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.++|+||+.+........ ......+...|++||..... ..+.+.|+|++|+++++|                     
T Consensus       130 ~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------  187 (215)
T cd00180         130 GKVKLADFGLSKLLTSDKS-LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------  187 (215)
T ss_pred             CcEEEecCCceEEccCCcc-hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------
Confidence            9999999999987644321 12234578899999988776 888999999999999998                     


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML  680 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  680 (702)
                                              ..+.+++.+|++.||++||+++++++.|
T Consensus       188 ------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 ------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             ------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                                    5678888999999999999999998753

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.86  E-value=2.4e-22  Score=189.47  Aligned_cols=199  Identities=20%  Similarity=0.285  Sum_probs=149.5

Q ss_pred             eeeEEE--EEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLV--YKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~--~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |++|+.  .-.....+-||+||+++.+...+..    .++..++..++.|++.||.|+|+.   ||.|||+||.|+++|.
T Consensus        95 Ii~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh  167 (338)
T KOG0668|consen   95 IIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDH  167 (338)
T ss_pred             eeehhhhhcCccccCchhHhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeech
Confidence            667763  3455788899999999988877763    567788899999999999999999   9999999999999987


Q ss_pred             CC-cEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          549 SW-RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       549 ~~-~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                      .. .++|+|+|+|.++........  ...+..|--||.+-. ..|+..-|+|||||++..|+..+.||-...+..++...
T Consensus       168 ~~rkLrlIDWGLAEFYHp~~eYnV--RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVk  245 (338)
T KOG0668|consen  168 ELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVK  245 (338)
T ss_pred             hhceeeeeecchHhhcCCCceeee--eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHH
Confidence            54 599999999998866554332  345778899997754 57889999999999999999999999776555544322


Q ss_pred             HHHH------------HHhhhcc------------ccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          627 STWV------------YNCFVAG------------EFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       627 ~~~~------------~~~~~~~------------~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ...+            ++....+            .+..++..+-.....++.++++.+.|..|-.+|||+.|.+.
T Consensus       246 IakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  246 IAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             HHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence            1111            0011111            22222222223334578899999999999999999999875

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=99.85  E-value=1.7e-21  Score=171.90  Aligned_cols=110  Identities=29%  Similarity=0.522  Sum_probs=85.2

Q ss_pred             ecCCccccCcCcceeeeeecCCccEEEeecCccceEEeeeeeeeeccCcceEEEEEEccCCcEEEEEecccCCCCcceEE
Q 038002          206 WANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLYSHHFKNDGNSTVGI  285 (702)
Q Consensus       206 w~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~Ld~dG~lr~y~~~~~~~~~~~w~~  285 (702)
                      ||+|+|+|..+++.|.+.....-.+.+..+..+.+      +.+...+.+.++|++||.+|++++|.|....+.   |.+
T Consensus         1 wrsG~WnG~~f~g~p~~~~~~~~~~~fv~~~~e~~------~t~~~~~~s~~~r~~ld~~G~l~~~~w~~~~~~---W~~   71 (110)
T PF00954_consen    1 WRSGPWNGQRFSGIPEMSSNSLYNYSFVSNNEEVY------YTYSLSNSSVLSRLVLDSDGQLQRYIWNESTQS---WSV   71 (110)
T ss_pred             CCccccCCeEECCcccccccceeEEEEEECCCeEE------EEEecCCCceEEEEEEeeeeEEEEEEEecCCCc---EEE
Confidence            89999999988887765522222222232233322      444566888999999999999999999755554   999


Q ss_pred             EEeecccccccccCCCCCccccCCCCCCCCCccCCCCCccccC
Q 038002          286 EWSALEKQCVVKGFCGLNSYCSTSTNISTKGDCHCFRGFNFIN  328 (702)
Q Consensus       286 ~w~~p~~~Cd~~g~CG~~g~C~~~~~~~~~~~C~C~~GF~~~~  328 (702)
                      .|++|.++||+|+.||+||+|+.    +..+.|.||+||+|++
T Consensus        72 ~~~~p~d~Cd~y~~CG~~g~C~~----~~~~~C~Cl~GF~P~n  110 (110)
T PF00954_consen   72 FWSAPKDQCDVYGFCGPNGICNS----NNSPKCSCLPGFEPKN  110 (110)
T ss_pred             EEEecccCCCCccccCCccEeCC----CCCCceECCCCcCCCc
Confidence            99999999999999999999965    3578899999999975

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.85  E-value=5.7e-22  Score=191.40  Aligned_cols=188  Identities=19%  Similarity=0.290  Sum_probs=136.6

Q ss_pred             EEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE--eCCCcEE
Q 038002          476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI--DDSWRAK  553 (702)
Q Consensus       476 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll--~~~~~~k  553 (702)
                      ..|+..+.+++++||++.|+|..-+...  .+-+....+++.|+++||.|||++   ++||||||.+||||  .+..++|
T Consensus        89 vaFqt~d~YvF~qE~aP~gdL~snv~~~--GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvK  163 (378)
T KOG1345|consen   89 VAFQTSDAYVFVQEFAPRGDLRSNVEAA--GIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVK  163 (378)
T ss_pred             HHhhcCceEEEeeccCccchhhhhcCcc--cccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEE
Confidence            5577799999999999999999988653  477788889999999999999999   99999999999999  3345899


Q ss_pred             EecccceeecCCCCCceeeceeccccccCcccccC---C--CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          554 ISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS---G--LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       554 l~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~--~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      |+|||.....+    ........+..|.+||....   +  ...+.+|||.||+++|.++||..||+.. ...+.   .-
T Consensus       164 lcDFG~t~k~g----~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka-~~~d~---~Y  235 (378)
T KOG1345|consen  164 LCDFGLTRKVG----TTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKA-SIMDK---PY  235 (378)
T ss_pred             eeecccccccC----ceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhh-hccCc---hH
Confidence            99999987532    22233445678999996532   2  3457899999999999999999999743 22222   22


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      +.+..+..+......+  .-...++.+.++.++-|..+|++|--..++.+
T Consensus       236 ~~~~~w~~rk~~~~P~--~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk  283 (378)
T KOG1345|consen  236 WEWEQWLKRKNPALPK--KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKK  283 (378)
T ss_pred             HHHHHHhcccCccCch--hhcccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence            3333443333322111  12234667778888899999999944444433

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.83  E-value=4.5e-21  Score=196.67  Aligned_cols=229  Identities=20%  Similarity=0.213  Sum_probs=164.4

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-----hhhHhh--------------------------eeeEEEEEecCCeeEEEEe
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-----LCFLIA--------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-----~~~avk--------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      ..++...++|+|.|  |+++.+..     +.||+|                          |+.+...+++++...+|||
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp  115 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLP  115 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEec
Confidence            34455678889988  77766533     567776                          8888899999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC-CCcEEEecccceeecCCCC-
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD-SWRAKISDFGLAKLLMPNQ-  567 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~-  567 (702)
                      |++.-+..++..    .++..++..+++.++.||+++|.+   |||||||||.|+|.+. .++-.|+|||+|....... 
T Consensus       116 ~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~  188 (418)
T KOG1167|consen  116 YFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQ  188 (418)
T ss_pred             ccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHHHHhhhh
Confidence            999999999885    466889999999999999999999   9999999999999964 4678999999998211000 


Q ss_pred             ------------------------------------------CceeeceeccccccCcccccC-CCCCccccccchhHhH
Q 038002          568 ------------------------------------------TGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVL  604 (702)
Q Consensus       568 ------------------------------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil  604 (702)
                                                                ........||++|.|||++.. ...+++.||||.|||+
T Consensus       189 ~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~  268 (418)
T KOG1167|consen  189 TEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVIL  268 (418)
T ss_pred             hhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecccee
Confidence                                                      000113459999999998754 5678999999999999


Q ss_pred             HHhhhCCcCCcCCCCCcchhhhHHHHHH-------hhhccc------------------cccc-----cc-------c-c
Q 038002          605 LEIICCRSNFEVNVSTADEVLLSTWVYN-------CFVAGE------------------FNKL-----VE-------E-E  646 (702)
Q Consensus       605 ~elltG~~Pf~~~~~~~~~~~~~~~~~~-------~~~~~~------------------~~~~-----~~-------~-~  646 (702)
                      +.+++++.||-......+.......+..       ....+.                  +..+     ..       . .
T Consensus       269 Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~  348 (418)
T KOG1167|consen  269 LSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREI  348 (418)
T ss_pred             ehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecc
Confidence            9999999999654222211111000000       000000                  0000     00       0 0


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ........+.+++.+||+.||.+|.|+++.|+
T Consensus       349 ~~d~~~~~~~dlLdk~le~np~kRitAEeALk  380 (418)
T KOG1167|consen  349 GSDVFPALLLDLLDKCLELNPQKRITAEDALK  380 (418)
T ss_pred             ccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence            11122337889999999999999999999886

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.80  E-value=3.3e-20  Score=198.75  Aligned_cols=193  Identities=20%  Similarity=0.237  Sum_probs=144.9

Q ss_pred             eeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCc
Q 038002          472 SSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWR  551 (702)
Q Consensus       472 ~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~  551 (702)
                      +.+++.+...+..++.||||.+|+|.+.-+-.+ .+++.++....++.++||+|||+.   +-+|||||-.||++.+.|.
T Consensus        75 vay~gsylr~dklwicMEycgggslQdiy~~Tg-plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gD  150 (829)
T KOG0576|consen   75 VAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGD  150 (829)
T ss_pred             HHHHhhhhhhcCcEEEEEecCCCcccceeeecc-cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCc
Confidence            333444555889999999999999999876544 789999999999999999999999   9999999999999999999


Q ss_pred             EEEecccceeecCCCCCceeeceeccccccCcccc---cCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          552 AKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQ---NSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       552 ~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      +|++|||.+..+...- .....+.||+.|||||+.   +.+.|...+|||++|+...|+---+.|......      .. 
T Consensus       151 vklaDfgvsaqitati-~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp------mr-  222 (829)
T KOG0576|consen  151 VKLADFGVSAQITATI-AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP------MR-  222 (829)
T ss_pred             eeecccCchhhhhhhh-hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch------HH-
Confidence            9999999987653221 123457899999999965   466889999999999999999877776532211      00 


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       +...+..... +.....-...-.+.+.++++.+|..+|.+||+++.++.
T Consensus       223 -~l~LmTkS~~-qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  223 -ALFLMTKSGF-QPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             -HHHHhhccCC-CCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence             1111111111 11111123345677888888999999999999987654

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.79  E-value=5e-19  Score=177.07  Aligned_cols=143  Identities=27%  Similarity=0.367  Sum_probs=124.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      +++++..+......++++|++++++|.+++......+++..+..++.+++.++.+||+.   +++|+||+|+||+++.++
T Consensus        59 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~  135 (225)
T smart00221       59 IVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDG  135 (225)
T ss_pred             hhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCC
Confidence            66677778888999999999999999999987653388999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccc-cCCCCCccccccchhHhHHHhhhCCcCCcC
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNFEV  616 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlGvil~elltG~~Pf~~  616 (702)
                      .++|+|||.+...............++..|++||.. ....++.++|+|+||++++||++|+.||..
T Consensus       136 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      136 LVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             CEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            999999999988754431123345678889999988 666788899999999999999999999964

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.78  E-value=3.2e-19  Score=201.45  Aligned_cols=183  Identities=21%  Similarity=0.260  Sum_probs=145.4

Q ss_pred             EEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecC
Q 038002          485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLM  564 (702)
Q Consensus       485 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~  564 (702)
                      +-+||||++ +|..++.... ++...++..++.|++.|++|||+.   ||.||||||+|+++..+|.+||+|||.+..+.
T Consensus       397 ~~~mE~~~~-Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~  471 (601)
T KOG0590|consen  397 LQSMEYCPY-DLFSLVMSNG-KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFR  471 (601)
T ss_pred             hhhhhcccH-HHHHHHhccc-ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeec
Confidence            334999999 9999997763 788899999999999999999999   99999999999999999999999999998775


Q ss_pred             CCCC---ceeeceeccccccCcccccCCCCCc-cccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccc
Q 038002          565 PNQT---GIVAGVRGSRGYMAPEWQNSGLITV-KSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFN  640 (702)
Q Consensus       565 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~-~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  640 (702)
                      ....   ......+|+.+|+|||.+.+..|.+ ..||||.|+++..|++|+.||......+...      ..........
T Consensus       472 ~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~------~~~~~~~~~~  545 (601)
T KOG0590|consen  472 YPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF------KTNNYSDQRN  545 (601)
T ss_pred             cCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch------hhhccccccc
Confidence            4333   3445688999999999998888875 5799999999999999999998663332221      0000111111


Q ss_pred             ccccc-ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          641 KLVEE-EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       641 ~~~~~-~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ....+ .+......+...+|.+||+.||.+|.|+++|++
T Consensus       546 ~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  546 IFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             cccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            11111 345566778899999999999999999999986

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.74  E-value=1.3e-17  Score=176.98  Aligned_cols=200  Identities=20%  Similarity=0.160  Sum_probs=145.9

Q ss_pred             eeeEEEEE-ecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYK-HRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~-~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      +..+...+ ..+...|+||+.+ |.+|.++..... .+++...++.++.|++.+|++||+.   |++||||||+|+++..
T Consensus        82 ~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~  157 (322)
T KOG1164|consen   82 FPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQ  157 (322)
T ss_pred             CCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecC
Confidence            34445555 4777899999999 889999986655 6799999999999999999999999   9999999999999975


Q ss_pred             C-----CcEEEeccccee--ecCCCCC-------ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCC
Q 038002          549 S-----WRAKISDFGLAK--LLMPNQT-------GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF  614 (702)
Q Consensus       549 ~-----~~~kl~Dfg~a~--~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf  614 (702)
                      .     ..+.|.|||+++  .+.....       ......+||..|.++....+...+.+.|+||++.++.|++.|..||
T Consensus       158 ~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW  237 (322)
T KOG1164|consen  158 SSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPW  237 (322)
T ss_pred             CCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCC
Confidence            4     469999999998  3322211       1123466999999999999999999999999999999999999999


Q ss_pred             cCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          615 EVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      .......................      .....   ...+.++..-+-..+..++|....+...|+..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~  297 (322)
T KOG1164|consen  238 EALEMTDLKSKFEKDPRKLLTDR------FGDLK---PEEFAKILEYIDSLDYEDKPDYEKLAELLKDV  297 (322)
T ss_pred             ccccccchHHHHHHHhhhhcccc------ccCCC---hHHHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence            65432222111111111110000      11112   23344444444557999999999999988664

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.74  E-value=4.3e-18  Score=169.18  Aligned_cols=170  Identities=21%  Similarity=0.205  Sum_probs=147.5

Q ss_pred             cccccceEEEeEE--EEEeeee--hhhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          444 KVNDKRKLLTVLA--GCLGSIT--FLCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~--~~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      .++.-++||+|.|  .+.|.-.  +++||||                          |...+-+.+++.+-.||+|.+ |
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-G  107 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-G  107 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-C
Confidence            4566789999999  4445432  3899998                          888888889999999999999 8


Q ss_pred             CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC-----CCcEEEecccceeecCCCCC
Q 038002          494 GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD-----SWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       494 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~-----~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      .||+|++.-.+.+++...++.++.|++.-++++|++   .+|.|||||+|+||..     ...+.|+|||+|+.+....+
T Consensus       108 PSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T  184 (449)
T KOG1165|consen  108 PSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT  184 (449)
T ss_pred             cCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence            999999998888999999999999999999999999   9999999999999943     33589999999998754433


Q ss_pred             c------eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCC
Q 038002          569 G------IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVN  617 (702)
Q Consensus       569 ~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~  617 (702)
                      .      ......||..||+-....++..+.+.|+-|||-++...|-|..||..-
T Consensus       185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL  239 (449)
T KOG1165|consen  185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL  239 (449)
T ss_pred             cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence            2      234567999999999999999999999999999999999999999865

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.73  E-value=4.6e-18  Score=161.97  Aligned_cols=172  Identities=23%  Similarity=0.187  Sum_probs=147.4

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      ..+++..++||.|+|  .|+|....  +.||+|                          |..+..++.++.+-.+|||.+
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL   93 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL   93 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc
Confidence            456778899999999  77776543  888888                          777778899999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe---CCCcEEEecccceeecCCCCC
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID---DSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                       |.||++++.-...+++..+++-++-|++.-++|+|.+   ++|||||||+|+|..   ...++.++|||+++.+....+
T Consensus        94 -GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t  169 (341)
T KOG1163|consen   94 -GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT  169 (341)
T ss_pred             -CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence             8999999987777899999999999999999999999   999999999999994   345699999999997754332


Q ss_pred             c------eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCC
Q 038002          569 G------IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVN  617 (702)
Q Consensus       569 ~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~  617 (702)
                      .      ......||..|.+-....+...+.+.|+-|+|.+|..+.-|..||+..
T Consensus       170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl  224 (341)
T KOG1163|consen  170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL  224 (341)
T ss_pred             cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence            1      223567999999988888788899999999999999999999999865

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.69  E-value=1.1e-16  Score=172.90  Aligned_cols=207  Identities=24%  Similarity=0.397  Sum_probs=156.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCe-EecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQI-IHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~i-vH~dlkp~NIll~~~  549 (702)
                      +.++++..-++...++|.+||..|+|.|.+.....++++.-...++++|+.||+|||..   .| .|+.++..|-++|..
T Consensus         9 ~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~s~nClvd~~   85 (484)
T KOG1023|consen    9 LNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALKSSNCLVDSR   85 (484)
T ss_pred             hhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeeccccceeeee
Confidence            35666777778999999999999999999998777899999999999999999999998   55 999999999999999


Q ss_pred             CcEEEecccceeecCCCC-CceeeceeccccccCcccccCC-------CCCccccccchhHhHHHhhhCCcCCcCCCCCc
Q 038002          550 WRAKISDFGLAKLLMPNQ-TGIVAGVRGSRGYMAPEWQNSG-------LITVKSDVYSFGVVLLEIICCRSNFEVNVSTA  621 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~  621 (702)
                      ..+||+|||+........ ........-..-|.|||.++..       ..+.++||||||++++|+++.+.||.......
T Consensus        86 w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~  165 (484)
T KOG1023|consen   86 WVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVE  165 (484)
T ss_pred             EEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccC
Confidence            999999999998764311 1111122245579999988653       14678999999999999999999998753333


Q ss_pred             chhhhHHHHHHhhhccccccccccccC--HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          622 DEVLLSTWVYNCFVAGEFNKLVEEEVD--KITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      +..   +.+.. ... .....+.+.+.  .+..+.+..++..||..+|++||+++++-..++.+..
T Consensus       166 ~~~---eii~~-~~~-~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~  226 (484)
T KOG1023|consen  166 DPD---EIILR-VKK-GGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK  226 (484)
T ss_pred             ChH---HHHHH-HHh-cCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence            221   11111 111 11112222111  1444579999999999999999999999999887654

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.64  E-value=4.1e-15  Score=156.43  Aligned_cols=205  Identities=26%  Similarity=0.328  Sum_probs=151.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLET--RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |+.+...+......++++|++.+++|.+++.....  .+.......++.|++.+++|+|+.   +++|||+||+||+++.
T Consensus        60 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~  136 (384)
T COG0515          60 IVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDR  136 (384)
T ss_pred             eeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecC
Confidence            56677777777778999999999999977766542  688899999999999999999999   9999999999999999


Q ss_pred             CC-cEEEecccceeecCCCCCc-----eeeceeccccccCcccccC---CCCCccccccchhHhHHHhhhCCcCCcCCCC
Q 038002          549 SW-RAKISDFGLAKLLMPNQTG-----IVAGVRGSRGYMAPEWQNS---GLITVKSDVYSFGVVLLEIICCRSNFEVNVS  619 (702)
Q Consensus       549 ~~-~~kl~Dfg~a~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~elltG~~Pf~~~~~  619 (702)
                      .+ .++++|||.+.........     ......|+..|++||.+..   .......|+||+|++++++++|..||.....
T Consensus       137 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~  216 (384)
T COG0515         137 DGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKN  216 (384)
T ss_pred             CCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCc
Confidence            88 7999999999865443321     2356779999999998877   5788999999999999999999999765422


Q ss_pred             CcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          620 TADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ................. .................+.+++..++..+|..|.++.+....
T Consensus       217 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         217 SSATSQTLKIILELPTP-SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             cccHHHHHHHHHhcCCc-ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            10011111111111100 000011111112234577888888999999999998887764

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.64  E-value=6.2e-17  Score=171.37  Aligned_cols=173  Identities=22%  Similarity=0.267  Sum_probs=131.1

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEeccc
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLE--TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFG  558 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg  558 (702)
                      ....|+.|++|...+|.++|...+  ...++...+.++.|++.|++|   +   +.+|+|+||.||++..+..+||.|||
T Consensus       328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFg  401 (516)
T KOG1033|consen  328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFG  401 (516)
T ss_pred             ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhh
Confidence            346899999999999999996543  357788999999999999999   6   99999999999999999999999999


Q ss_pred             ceeecCCCC-----CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHH
Q 038002          559 LAKLLMPNQ-----TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYN  632 (702)
Q Consensus       559 ~a~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~  632 (702)
                      +........     ....+...||..||+||.+.+..|+.++||||||+||+|++. -..+++-           .....
T Consensus       402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er-----------~~t~~  470 (516)
T KOG1033|consen  402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER-----------IATLT  470 (516)
T ss_pred             heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH-----------HHhhh
Confidence            998775544     223445679999999999999999999999999999999986 3333321           11122


Q ss_pred             hhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 038002          633 CFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKN  675 (702)
Q Consensus       633 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~e  675 (702)
                      .+..+.+++..-.+     .+.-..++.+++...|.+||++.+
T Consensus       471 d~r~g~ip~~~~~d-----~p~e~~ll~~lls~~p~~RP~~~~  508 (516)
T KOG1033|consen  471 DIRDGIIPPEFLQD-----YPEEYTLLQQLLSPSPEERPSAIE  508 (516)
T ss_pred             hhhcCCCChHHhhc-----CcHHHHHHHHhcCCCcccCchHHH
Confidence            22333333111111     123346778899999999994433

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.64  E-value=2.8e-16  Score=152.06  Aligned_cols=194  Identities=22%  Similarity=0.284  Sum_probs=144.6

Q ss_pred             eeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCC-CCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          472 SSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR-PLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       472 ~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~-~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      ..+++.+....++.+|..||+.|+|...|++.... .+..++.+++.++++|++|||+.. +-|.---|....+++|++.
T Consensus       250 lpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedl  328 (448)
T KOG0195|consen  250 LPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDL  328 (448)
T ss_pred             hhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchh
Confidence            34456777889999999999999999999877543 678899999999999999999972 2344456889999999998


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCC---ccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT---VKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      +.+|.- +-+++.     .......-.|.|++||.++.++-+   .++|+|||.+++|||.|.+.||..-...+-...+ 
T Consensus       329 tarism-ad~kfs-----fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki-  401 (448)
T KOG0195|consen  329 TARISM-ADTKFS-----FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI-  401 (448)
T ss_pred             hhheec-ccceee-----eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh-
Confidence            877752 111111     111122347889999988765433   6789999999999999999999754222111111 


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                                 ..+-+...+++..+..+.+++.-|+..||.+||.++.|+-.||+..
T Consensus       402 -----------aleglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  402 -----------ALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             -----------hhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence                       1122233566677888999999999999999999999999999754

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.61  E-value=4.5e-17  Score=183.55  Aligned_cols=187  Identities=25%  Similarity=0.287  Sum_probs=133.5

Q ss_pred             ecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEeccc
Q 038002          479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFG  558 (702)
Q Consensus       479 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg  558 (702)
                      ..++..|||-+|+.. +|.|.|.... .+..-+..-|+.|++.||..+|+.   ||+|||||.||||+..-.-+.|+||.
T Consensus        91 ~t~kAAylvRqyvkh-nLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFA  165 (1431)
T KOG1240|consen   91 VTDKAAYLVRQYVKH-NLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFA  165 (1431)
T ss_pred             HhhHHHHHHHHHHhh-hhhhhhccch-HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhccc
Confidence            457778899999965 9999986654 677888888999999999999999   99999999999999999999999998


Q ss_pred             ceeecC--CCCCc----eeeceeccccccCcccccC----------CC-CCccccccchhHhHHHhhh-CCcCCcCCCCC
Q 038002          559 LAKLLM--PNQTG----IVAGVRGSRGYMAPEWQNS----------GL-ITVKSDVYSFGVVLLEIIC-CRSNFEVNVST  620 (702)
Q Consensus       559 ~a~~~~--~~~~~----~~~~~~gt~~y~aPE~~~~----------~~-~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~  620 (702)
                      .-+...  .+...    ...+...-.-|+|||.+-.          .. .+++.||||+||++.||++ |++||...   
T Consensus       166 sFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS---  242 (1431)
T KOG1240|consen  166 SFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS---  242 (1431)
T ss_pred             ccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH---
Confidence            765331  11111    1112222335999996532          12 5688999999999999998 68888643   


Q ss_pred             cchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          621 ADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                          .+..     ++.+. ........+..+...+++++..|++.||++|.++++.++--.++
T Consensus       243 ----QL~a-----Yr~~~-~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~  295 (1431)
T KOG1240|consen  243 ----QLLA-----YRSGN-ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGL  295 (1431)
T ss_pred             ----HHHh-----HhccC-ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence                1111     11111 00000111112233788899999999999999999999886654

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.60  E-value=5.4e-15  Score=150.39  Aligned_cols=185  Identities=21%  Similarity=0.230  Sum_probs=131.7

Q ss_pred             ecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE--eCCC--cEEE
Q 038002          479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI--DDSW--RAKI  554 (702)
Q Consensus       479 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll--~~~~--~~kl  554 (702)
                      -++...||||..++. +|.+++....  .+.....-++.|+++|+.|||++   ||.|||+|.+|||+  |+++  .+.|
T Consensus       313 g~~~tlylvMkrY~~-tLr~yl~~~~--~s~r~~~~~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVv  386 (598)
T KOG4158|consen  313 GEPKTLYLVMKRYRQ-TLREYLWTRH--RSYRTGRVILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVV  386 (598)
T ss_pred             CCCceEEEehhcchh-hHHHHHhcCC--CchHHHHHHHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEE
Confidence            457889999999966 9999997653  67777888999999999999999   99999999999999  4444  4789


Q ss_pred             ecccceeecCCCC-----CceeeceeccccccCcccccCCC------CCccccccchhHhHHHhhhCCcCCcCCCCCcch
Q 038002          555 SDFGLAKLLMPNQ-----TGIVAGVRGSRGYMAPEWQNSGL------ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE  623 (702)
Q Consensus       555 ~Dfg~a~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~  623 (702)
                      +|||.+-.-....     .......-|....||||+....+      .-.|+|.|+.|.+.||++....||....    +
T Consensus       387 aDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG----e  462 (598)
T KOG4158|consen  387 ADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG----E  462 (598)
T ss_pred             cccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccc----h
Confidence            9999886432211     11112344677789999875422      2268999999999999999999997531    1


Q ss_pred             hhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          624 VLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                      ..+....   +.+.+++.     .+......+.+++...|+.||.+|++..-....|.
T Consensus       463 m~L~~r~---Yqe~qLPa-----lp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~  512 (598)
T KOG4158|consen  463 MLLDTRT---YQESQLPA-----LPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN  512 (598)
T ss_pred             heechhh---hhhhhCCC-----CcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence            1111111   12222222     22334456667777789999999999766555543

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.59  E-value=4.1e-16  Score=168.28  Aligned_cols=182  Identities=23%  Similarity=0.205  Sum_probs=144.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      ++++...++.+...++++++..+|.|...+.+.. ...+.....+...++-+++++|+.   +|+|+|+|++||+++.+|
T Consensus        59 ~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~-~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~G  134 (612)
T KOG0603|consen   59 LVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEV-MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEG  134 (612)
T ss_pred             eeeeeeeeccccchhHhhhhcccchhhhccccCC-chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccC
Confidence            5778889999999999999999999999887665 566677777888999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      ++++.|||+++..-..+..     +||..|||||++.  ....++|.||||++.+||++|..||...     ..      
T Consensus       135 hi~~tdfglske~v~~~~~-----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~-----~~------  196 (612)
T KOG0603|consen  135 HIKLTDFGLSKEAVKEKIA-----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD-----TM------  196 (612)
T ss_pred             ccccCCchhhhHhHhhhhc-----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH-----HH------
Confidence            9999999999876443332     7899999999988  5678999999999999999999999641     00      


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCH--HHHHHHHh
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSM--KNVILMLE  681 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~--~evl~~Le  681 (702)
                       ..+..      .....+......+.+++..++..+|..|--.  ..+.+.++
T Consensus       197 -~~Il~------~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~  242 (612)
T KOG0603|consen  197 -KRILK------AELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQ  242 (612)
T ss_pred             -HHHhh------hccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhc
Confidence             00000      0113455666777778888888899888654  34444443

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.57  E-value=2.4e-15  Score=153.14  Aligned_cols=161  Identities=21%  Similarity=0.285  Sum_probs=105.4

Q ss_pred             eEEEEecCCCCCHHHHhhc---CCCC---CCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecc
Q 038002          484 KLLVYEFMSKGSLADLLFN---LETR---PLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDF  557 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~---~~~~---~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df  557 (702)
                      .+++|+-+ .++|.+++..   ....   .....++.+..|+++.+++||..   |++|+||||+|++++.+|.++|+||
T Consensus       114 ~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi~~~nfll~~~G~v~Lg~F  189 (288)
T PF14531_consen  114 RFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDIKPENFLLDQDGGVFLGDF  189 (288)
T ss_dssp             EEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEE-TTS-EEE--G
T ss_pred             hhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecccceeeEEEcCCCCEEEcCh
Confidence            46788888 4588887642   1111   22344456778999999999999   9999999999999999999999999


Q ss_pred             cceeecCCCCCceeeceeccccccCcccccC--------CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          558 GLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS--------GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       558 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      +.....+...   .. ...+..|.+||....        -.++.+.|.|+||+++|.|++++.||...........    
T Consensus       190 ~~~~r~g~~~---~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~----  261 (288)
T PF14531_consen  190 SSLVRAGTRY---RC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW----  261 (288)
T ss_dssp             GGEEETTEEE---EG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG----
T ss_pred             HHHeecCcee---ec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc----
Confidence            8877543211   11 234577999996532        2578899999999999999999999976522211110    


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCC
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLR  670 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~R  670 (702)
                              .+     .... +.++.+..||..+|+.||++|
T Consensus       262 --------~f-----~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  262 --------DF-----SRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             --------GG-----TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             --------cc-----hhcC-CcCHHHHHHHHHHccCCcccC
Confidence                    01     1223 678889999999999999988

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.55  E-value=8.9e-15  Score=155.45  Aligned_cols=97  Identities=22%  Similarity=0.134  Sum_probs=77.1

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCC-CCCcEEEeCCCcEEEecccc
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI-KLRNILIDDSWRAKISDFGL  559 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dl-kp~NIll~~~~~~kl~Dfg~  559 (702)
                      .+..||||||++|++|... ...    .   ...++.|++++|+|||++   ||+|||| ||+|||++.++.+||+|||+
T Consensus        90 ~~~~~LVmE~~~G~~L~~~-~~~----~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGl  158 (365)
T PRK09188         90 TGKDGLVRGWTEGVPLHLA-RPH----G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQL  158 (365)
T ss_pred             cCCcEEEEEccCCCCHHHh-Ccc----c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECcc
Confidence            3568999999999999732 111    1   146788999999999999   9999999 99999999999999999999


Q ss_pred             eeecCCCCCc-------eeeceeccccccCcccccC
Q 038002          560 AKLLMPNQTG-------IVAGVRGSRGYMAPEWQNS  588 (702)
Q Consensus       560 a~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~  588 (702)
                      ++.+......       ......+++.|.|||.+..
T Consensus       159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             ceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            9977543321       1235668889999998754

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.52  E-value=6.1e-15  Score=170.03  Aligned_cols=169  Identities=18%  Similarity=0.106  Sum_probs=139.1

Q ss_pred             CcccccccceEEEeEE--EEEeeeeh-hhhHhh---------------------------eeeEEEEEecCCeeEEEEec
Q 038002          441 GNDKVNDKRKLLTVLA--GCLGSITF-LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       441 ~~~~~~~~~~l~~g~~--v~~~~~~~-~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      +.+++...+.+|+|++  ||.|.... ..||+|                           |..+...+.-.+.-+||+||
T Consensus       696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey  775 (974)
T KOG1166|consen  696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEY  775 (974)
T ss_pred             cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeec
Confidence            5566777789999998  99998766 788888                           22222333447777999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe-------CCCcEEEecccceeec
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID-------DSWRAKISDFGLAKLL  563 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~-------~~~~~kl~Dfg~a~~~  563 (702)
                      .+.|+|.+++...+ .+++..++.++.|+++-+++||..   +||||||||+|+||.       ++.-++|+|||.+..+
T Consensus       776 ~~~Gtlld~~N~~~-~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm  851 (974)
T KOG1166|consen  776 SPYGTLLDLINTNK-VMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM  851 (974)
T ss_pred             cccccHHHhhccCC-CCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence            99999999998443 799999999999999999999999   999999999999993       3445999999998755


Q ss_pred             CCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcC
Q 038002          564 MPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSN  613 (702)
Q Consensus       564 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~P  613 (702)
                      ..-.. .......+|-.+-.+|...+++++..+|.|.|+.+++-||.|+..
T Consensus       852 ~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~  902 (974)
T KOG1166|consen  852 KLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM  902 (974)
T ss_pred             eEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence            33222 245567789999999999999999999999999999999999854

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.45  E-value=1.5e-13  Score=134.12  Aligned_cols=75  Identities=20%  Similarity=0.199  Sum_probs=64.7

Q ss_pred             eEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhh-hhcCCCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          484 KLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYL-HDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L-H~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      .+|||||+++++|...+... ..++..++..++.|++.+|++| |+.   ||+||||||+||+++ ++.++|+|||++..
T Consensus        92 ~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~-~~~v~LiDFG~a~~  166 (190)
T cd05147          92 HVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH-DGKLYIIDVSQSVE  166 (190)
T ss_pred             CEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-CCcEEEEEcccccc
Confidence            38999999998876654333 3688899999999999999999 688   999999999999998 47899999999975


Q ss_pred             c
Q 038002          563 L  563 (702)
Q Consensus       563 ~  563 (702)
                      .
T Consensus       167 ~  167 (190)
T cd05147         167 H  167 (190)
T ss_pred             C
Confidence            4

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.44  E-value=8.3e-14  Score=137.77  Aligned_cols=102  Identities=13%  Similarity=0.168  Sum_probs=78.8

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccce
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA  560 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a  560 (702)
                      ....+|||||++|.+|.++..     .++    ....+++.+|..+|+.   |++|||+||+||+++.++ ++|+|||..
T Consensus       115 ~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i~liDfg~~  181 (232)
T PRK10359        115 AHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-LRIIDLSGK  181 (232)
T ss_pred             cCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-EEEEECCCc
Confidence            356899999999999988742     222    2456999999999999   999999999999999988 999999987


Q ss_pred             eecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhh
Q 038002          561 KLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII  608 (702)
Q Consensus       561 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell  608 (702)
                      .........             ..+.....+..++|+|+||+.+..+.
T Consensus       182 ~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        182 RCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             ccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence            654221110             01344455668999999999987654

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.42  E-value=1.6e-13  Score=155.39  Aligned_cols=199  Identities=22%  Similarity=0.214  Sum_probs=131.1

Q ss_pred             ccccceEEEeEE--EEEeeee--hhhhHhheeeEEE----EEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHH
Q 038002          445 VNDKRKLLTVLA--GCLGSIT--FLCFLIAISSLLV----YKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIA  516 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~--~~~~avki~~l~~----~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~  516 (702)
                      +...|.+..|+.  ||.....  ...+|+||.+=-.    ....-+..+.|      |+=...++..+ .++.       
T Consensus        85 f~~IklisngAygavylvrh~~trqrfa~kiNkq~lilRnilt~a~npfvv------gDc~tllk~~g-~lPv-------  150 (1205)
T KOG0606|consen   85 FNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNLILRNILTFAGNPFVV------GDCATLLKNIG-PLPV-------  150 (1205)
T ss_pred             cceeEeeccCCCCceeeeeccccccchhhcccccchhhhccccccCCccee------chhhhhcccCC-CCcc-------
Confidence            334455555544  7777554  3677777432111    11112233333      44455555433 2222       


Q ss_pred             HHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC--------------ceeeceeccccccC
Q 038002          517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT--------------GIVAGVRGSRGYMA  582 (702)
Q Consensus       517 ~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~--------------~~~~~~~gt~~y~a  582 (702)
                       +++.+++|||..   +|+|||+||+|.+|..-|++|+.|||+.+.......              .....++||+.|+|
T Consensus       151 -dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyia  226 (1205)
T KOG0606|consen  151 -DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIA  226 (1205)
T ss_pred             -hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccC
Confidence             237899999999   999999999999999999999999999975422110              11234789999999


Q ss_pred             cccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHc
Q 038002          583 PEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLC  662 (702)
Q Consensus       583 PE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  662 (702)
                      ||++..+.|...+|+|++|+|+||.+.|..||..+..++   .+...+...+   .+.     +-+.....+..+++.++
T Consensus       227 PeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee---lfg~visd~i---~wp-----E~dea~p~Ea~dli~~L  295 (1205)
T KOG0606|consen  227 PEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE---LFGQVISDDI---EWP-----EEDEALPPEAQDLIEQL  295 (1205)
T ss_pred             hhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH---HHhhhhhhhc---ccc-----ccCcCCCHHHHHHHHHH
Confidence            999999999999999999999999999999998663221   1221111111   111     11233445677778888


Q ss_pred             ccCCCCCCCC
Q 038002          663 IQDEPNLRPS  672 (702)
Q Consensus       663 L~~dP~~RPt  672 (702)
                      |+.+|.+|--
T Consensus       296 L~qnp~~Rlg  305 (1205)
T KOG0606|consen  296 LRQNPLCRLG  305 (1205)
T ss_pred             HHhChHhhcc
Confidence            9999999953

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.41  E-value=4.5e-13  Score=131.03  Aligned_cols=76  Identities=20%  Similarity=0.159  Sum_probs=64.9

Q ss_pred             eEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          484 KLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      .+|||||++|+++....... ..++..+...++.|++.++.+||+ .   ||+||||||+||+++ ++.++|+|||++..
T Consensus        92 ~~lVmE~~~g~~~~~~~l~~-~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~-~~~~~liDFG~a~~  166 (190)
T cd05145          92 NVLVMEFIGDDGSPAPRLKD-VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH-DGKPYIIDVSQAVE  166 (190)
T ss_pred             CEEEEEEecCCCchhhhhhh-ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-CCCEEEEEccccee
Confidence            48999999988654432222 357788999999999999999999 8   999999999999999 78999999999987


Q ss_pred             cC
Q 038002          563 LM  564 (702)
Q Consensus       563 ~~  564 (702)
                      ..
T Consensus       167 ~~  168 (190)
T cd05145         167 LD  168 (190)
T ss_pred             cC
Confidence            54

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.40  E-value=6.1e-13  Score=128.90  Aligned_cols=132  Identities=15%  Similarity=0.112  Sum_probs=97.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCC-CCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI-KLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dl-kp~NIll~~~  549 (702)
                      |.+++.+    +..+++|||+.|.+|.+.+..        ....++.|++++|+++|++   ||+|||| ||+|||++.+
T Consensus        64 vP~ll~~----~~~~lvmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~  128 (218)
T PRK12274         64 TPRLLHW----DGRHLDRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQED  128 (218)
T ss_pred             CCEEEEE----cCEEEEEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCC
Confidence            4455544    456999999999999764321        1235778999999999999   9999999 7999999999


Q ss_pred             CcEEEecccceeecCCCCCc----e--------eeceeccccccCcccccC-CCCC-ccccccchhHhHHHhhhCCcCCc
Q 038002          550 WRAKISDFGLAKLLMPNQTG----I--------VAGVRGSRGYMAPEWQNS-GLIT-VKSDVYSFGVVLLEIICCRSNFE  615 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~----~--------~~~~~gt~~y~aPE~~~~-~~~~-~~~DiwSlGvil~elltG~~Pf~  615 (702)
                      +.++|+|||++.........    .        ..-...++.|+.|+...- ...+ ...+.++-|..+|.++|++.++-
T Consensus       129 g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~  208 (218)
T PRK12274        129 GSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW  208 (218)
T ss_pred             CCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence            99999999999865433310    0        001225777888874322 1233 56788899999999999999886


Q ss_pred             CC
Q 038002          616 VN  617 (702)
Q Consensus       616 ~~  617 (702)
                      .+
T Consensus       209 ~~  210 (218)
T PRK12274        209 ED  210 (218)
T ss_pred             cc
Confidence            54

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.25  E-value=1.4e-12  Score=147.84  Aligned_cols=197  Identities=23%  Similarity=0.282  Sum_probs=149.5

Q ss_pred             heeeEEEEEecCCeeEEEEecCCCCCHHHHhh-cCCCCCCHHHHHHHHHHHHHHHHhhh-hcCCCCeEecCCCCCcEEEe
Q 038002          470 AISSLLVYKHRSSKKLLVYEFMSKGSLADLLF-NLETRPLWRDRVRIALDVARGLLYLH-DECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       470 ki~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~-~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~~~~ivH~dlkp~NIll~  547 (702)
                      +++.+++...+.+..++++||..++++.+.+. ......+...+..++.|+..++.|+| ..   ++.|+||||+|.+++
T Consensus        82 n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~  158 (601)
T KOG0590|consen   82 NTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLD  158 (601)
T ss_pred             cccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhc
Confidence            35666777788999999999999999999994 33335777788889999999999999 87   999999999999999


Q ss_pred             CCC-cEEEecccceeecCC-CC-Cceeeceec-cccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcc
Q 038002          548 DSW-RAKISDFGLAKLLMP-NQ-TGIVAGVRG-SRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTAD  622 (702)
Q Consensus       548 ~~~-~~kl~Dfg~a~~~~~-~~-~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~  622 (702)
                      ..+ .++++|||+|..+.. .. .......+| ++.|.|||...+. ...+..|+||.|+++..+++|..|+........
T Consensus       159 ~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~  238 (601)
T KOG0590|consen  159 ESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG  238 (601)
T ss_pred             cCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc
Confidence            999 999999999998866 33 333445678 9999999988774 556889999999999999999999976533221


Q ss_pred             hhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          623 EVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .  ...|     ....  ................+++.+++..+|..|.+.+++..
T Consensus       239 ~--~~~~-----~~~~--~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  239 R--YSSW-----KSNK--GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             c--ceee-----cccc--cccccCccccCChhhhhcccccccCCchhccccccccc
Confidence            1  1111     1110  00001112233556677778889899999999887653

>smart00090 RIO RIO-like kinase

Probab=99.24  E-value=1.3e-11  Score=124.56  Aligned_cols=76  Identities=22%  Similarity=0.287  Sum_probs=64.9

Q ss_pred             eeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCC-eEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          483 KKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ-IIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       483 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      ..++||||+++.+|...+.... .....++..++.||+.+|++||++   + |+|+||||+||+++ ++.++|+|||.+.
T Consensus       122 ~~~lV~E~~~g~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NIli~-~~~i~LiDFg~a~  196 (237)
T smart00090      122 RNVLVMEFIGGDGLPAPRLKDV-EPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNILVH-DGKVVIIDVSQSV  196 (237)
T ss_pred             CceEEEEEecCCcccccccccC-CcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhEEEE-CCCEEEEEChhhh
Confidence            4589999999988877653332 455667788999999999999999   9 99999999999999 8899999999987


Q ss_pred             ec
Q 038002          562 LL  563 (702)
Q Consensus       562 ~~  563 (702)
                      ..
T Consensus       197 ~~  198 (237)
T smart00090      197 EL  198 (237)
T ss_pred             cc
Confidence            54

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.23  E-value=1.9e-11  Score=122.23  Aligned_cols=194  Identities=21%  Similarity=0.282  Sum_probs=130.9

Q ss_pred             HhheeeEE--EEEecCCeeEEEEecCCCCCHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCC
Q 038002          468 LIAISSLL--VYKHRSSKKLLVYEFMSKGSLADLLFNLE---TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR  542 (702)
Q Consensus       468 avki~~l~--~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~  542 (702)
                      .||..++.  ..+++..+..++.|||..|+|..+|++..   ..+....-.+|+.||+.||.|||+ |.+.|+|+++.-+
T Consensus       129 lvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~PpiihgnlTc~  207 (458)
T KOG1266|consen  129 LVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDPPIIHGNLTCD  207 (458)
T ss_pred             HHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCCccccCCcchh
Confidence            44444444  23346778899999999999999998643   246677778899999999999999 5779999999999


Q ss_pred             cEEEeCCCcEEEecccceeecC--C-CCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCC
Q 038002          543 NILIDDSWRAKISDFGLAKLLM--P-NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVS  619 (702)
Q Consensus       543 NIll~~~~~~kl~Dfg~a~~~~--~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~  619 (702)
                      .|++..++-+||.--.-.....  . ..........+-++|.+||.-.....+.++|||+||+..+||..+..--....+
T Consensus       208 tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS  287 (458)
T KOG1266|consen  208 TIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSES  287 (458)
T ss_pred             heeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcc
Confidence            9999999999886322111100  0 001111234467899999987777788899999999999999888764322211


Q ss_pred             Cc-chhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          620 TA-DEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       620 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .. .+......+ ..     +..           ..=..++.+|++..|..||+|.+++..
T Consensus       288 ~~~~ee~ia~~i-~~-----len-----------~lqr~~i~kcl~~eP~~rp~ar~llfH  331 (458)
T KOG1266|consen  288 KVEVEENIANVI-IG-----LEN-----------GLQRGSITKCLEGEPNGRPDARLLLFH  331 (458)
T ss_pred             eeehhhhhhhhe-ee-----ccC-----------ccccCcCcccccCCCCCCcchhhhhcC
Confidence            11 111111000 00     000           111245566999999999999988753

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.19  E-value=4.2e-11  Score=119.06  Aligned_cols=78  Identities=26%  Similarity=0.448  Sum_probs=68.4

Q ss_pred             EEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEe
Q 038002          476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS  555 (702)
Q Consensus       476 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~  555 (702)
                      .++...+..++||||++|++|.+++....    . ++..++.+++.+|++||+.   +++|+|++|.||+++ ++.++|+
T Consensus        66 ~~~~~~~~~~lv~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~li  136 (211)
T PRK14879         66 VYFVDPENFIIVMEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLI  136 (211)
T ss_pred             EEEEeCCCCEEEEEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEE
Confidence            44556678899999999999999986533    1 7888999999999999999   999999999999999 7899999


Q ss_pred             cccceee
Q 038002          556 DFGLAKL  562 (702)
Q Consensus       556 Dfg~a~~  562 (702)
                      |||.+..
T Consensus       137 Df~~a~~  143 (211)
T PRK14879        137 DFGLAEF  143 (211)
T ss_pred             ECCcccC
Confidence            9998764

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.14  E-value=7.9e-11  Score=133.80  Aligned_cols=75  Identities=27%  Similarity=0.445  Sum_probs=65.7

Q ss_pred             EEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEE
Q 038002          475 LVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKI  554 (702)
Q Consensus       475 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl  554 (702)
                      ..+...+...++||||+++++|.+++.         ....++.|++++|++||+.   +|+||||||+||++ +++.++|
T Consensus       402 ~~~~~~~~~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~l  468 (535)
T PRK09605        402 VIYDVDPEEKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYL  468 (535)
T ss_pred             EEEEEeCCCCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEE
Confidence            344555667899999999999999885         3567899999999999999   99999999999999 5779999


Q ss_pred             ecccceee
Q 038002          555 SDFGLAKL  562 (702)
Q Consensus       555 ~Dfg~a~~  562 (702)
                      +|||+++.
T Consensus       469 iDFGla~~  476 (535)
T PRK09605        469 IDFGLGKY  476 (535)
T ss_pred             EeCccccc
Confidence            99999875

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.14  E-value=7.4e-11  Score=116.19  Aligned_cols=74  Identities=26%  Similarity=0.429  Sum_probs=64.1

Q ss_pred             EEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEec
Q 038002          477 YKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISD  556 (702)
Q Consensus       477 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D  556 (702)
                      ++...+..++||||++|++|.+++.....        .++.+++.+|++||+.   +++|+|++|+||+++ ++.++++|
T Consensus        65 ~~~~~~~~~lv~e~~~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liD  132 (199)
T TIGR03724        65 YDVDPDNKTIVMEYIEGKPLKDVIEEGND--------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLID  132 (199)
T ss_pred             EEEECCCCEEEEEEECCccHHHHHhhcHH--------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEE
Confidence            33456677999999999999998754321        7899999999999999   999999999999999 78999999


Q ss_pred             ccceee
Q 038002          557 FGLAKL  562 (702)
Q Consensus       557 fg~a~~  562 (702)
                      ||++..
T Consensus       133 fg~a~~  138 (199)
T TIGR03724       133 FGLGKY  138 (199)
T ss_pred             CCCCcC
Confidence            998764

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.08  E-value=1.5e-10  Score=114.02  Aligned_cols=73  Identities=21%  Similarity=0.230  Sum_probs=62.9

Q ss_pred             CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          482 SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       482 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      ...++||||++|++|.++...       .....++.+++.++.++|+.   +|+|+||||+||++++++.++|+|||++.
T Consensus       104 ~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~~~~~~liDfg~~~  173 (198)
T cd05144         104 NRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDDDEKIYIIDWPQMV  173 (198)
T ss_pred             CCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcCCCcEEEEECCccc
Confidence            456999999999999876431       33567889999999999999   99999999999999999999999999997


Q ss_pred             ecC
Q 038002          562 LLM  564 (702)
Q Consensus       562 ~~~  564 (702)
                      ...
T Consensus       174 ~~~  176 (198)
T cd05144         174 STD  176 (198)
T ss_pred             cCC
Confidence            553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK10345 hypothetical protein; Provisional

Probab=99.07  E-value=4.4e-10  Score=110.87  Aligned_cols=83  Identities=18%  Similarity=0.141  Sum_probs=65.3

Q ss_pred             eeeEEEEEecCC---eeE-EEEec--CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHH-HhhhhcCCCCeEecCCCCCc
Q 038002          471 ISSLLVYKHRSS---KKL-LVYEF--MSKGSLADLLFNLETRPLWRDRVRIALDVARGL-LYLHDECEVQIIHCDIKLRN  543 (702)
Q Consensus       471 i~~l~~~~~~~~---~~~-lV~e~--~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL-~~LH~~~~~~ivH~dlkp~N  543 (702)
                      |++++++++++.   ..+ +|+||  +++++|.+++.+.  .+++.  ..++.|++.++ +|||++   +|+||||||+|
T Consensus        63 Ivr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~N  135 (210)
T PRK10345         63 IPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQN  135 (210)
T ss_pred             cceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHH
Confidence            788888888763   434 78999  6679999999663  35444  35678888777 999999   99999999999


Q ss_pred             EEEeC----CCcEEEecccce
Q 038002          544 ILIDD----SWRAKISDFGLA  560 (702)
Q Consensus       544 Ill~~----~~~~kl~Dfg~a  560 (702)
                      ||++.    +..++|+|++.+
T Consensus       136 ILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        136 ILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             EEEeccCCCCCcEEEEECCCC
Confidence            99974    347999995433

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=99.04  E-value=2.2e-10  Score=90.71  Aligned_cols=55  Identities=31%  Similarity=0.372  Sum_probs=44.6

Q ss_pred             eeeEEeeeccCCCCcccc--ccCCHHhhhhhccCCceeeEEEec----CCceeeccccccc
Q 038002          355 YNITSLKITWLGGLPYAK--LSVSKKDCSKSCLNDCYFGAAFYS----DGACSKHKFPLMF  409 (702)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~--~~~s~~~C~~~Cl~nCsC~a~~~~----~~~C~~~~~~l~~  409 (702)
                      ++|.+++.+++|+.....  ...++++|+++||+||||+||+|.    +++|+.|.+.|.+
T Consensus         5 d~F~~l~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~~~~~C~lW~~~L~d   65 (66)
T PF08276_consen    5 DGFLKLPNMKLPDFDNAIVDSSVSLEECEKACLSNCSCTAYAYSNLSGGGGCLLWYGDLVD   65 (66)
T ss_pred             CEEEEECCeeCCCCcceeeecCCCHHHHHhhcCCCCCEeeEEeeccCCCCEEEEEcCEeec
Confidence            467777788888875443  235999999999999999999995    3789999988765

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

Probab=99.02  E-value=4.4e-10  Score=94.13  Aligned_cols=72  Identities=19%  Similarity=0.269  Sum_probs=57.3

Q ss_pred             eeeeEEeeeccCCCCccccccCCHHhhhhhccCCceeeEEEec--CCceeecccccccccccCCccceEEEeec
Q 038002          354 FYNITSLKITWLGGLPYAKLSVSKKDCSKSCLNDCYFGAAFYS--DGACSKHKFPLMFATKDQYASAILFIKWS  425 (702)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~nCsC~a~~~~--~~~C~~~~~~l~~~~~~~~~~~~~~lKv~  425 (702)
                      ...|..+..+++++..+.....++++|++.||+||+|.||+|.  +++|++|..++.+.......+..+|||++
T Consensus        11 ~~~f~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~nCsC~a~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~yiKv~   84 (84)
T cd01098          11 TDGFLKLPDVKLPDNASAITAISLEECREACLSNCSCTAYAYNNGSGGCLLWNGLLNNLRSLSSGGGTLYLRLA   84 (84)
T ss_pred             CCEEEEeCCeeCCCchhhhccCCHHHHHHHHhcCCCcceeeecCCCCeEEEEeceecceEeecCCCcEEEEEeC
Confidence            3467788888888776544334999999999999999999995  58999999888886655444678999974

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.97  E-value=5.8e-10  Score=108.59  Aligned_cols=74  Identities=22%  Similarity=0.268  Sum_probs=59.2

Q ss_pred             eeEEEEecCCCCCHHHH-hhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeCCCcEEEecccce
Q 038002          483 KKLLVYEFMSKGSLADL-LFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDDSWRAKISDFGLA  560 (702)
Q Consensus       483 ~~~lV~e~~~~gsL~~~-l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a  560 (702)
                      ..++||||++++++... +....  . ..++..++.+++.++.++|. .   +|+|+||||+||+++ ++.++|+|||.+
T Consensus        89 ~~~lv~e~~~g~~~~~~~l~~~~--~-~~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~-~~~~~liDfg~a  161 (187)
T cd05119          89 RHVLVMEFIGGDGIPAPRLKDVR--L-LEDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD-DGKVYIIDVPQA  161 (187)
T ss_pred             CCEEEEEEeCCCCccChhhhhhh--h-cccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-CCcEEEEECccc
Confidence            46899999999543321 11111  1 15678899999999999999 8   999999999999999 889999999999


Q ss_pred             eec
Q 038002          561 KLL  563 (702)
Q Consensus       561 ~~~  563 (702)
                      ...
T Consensus       162 ~~~  164 (187)
T cd05119         162 VEI  164 (187)
T ss_pred             ccc
Confidence            754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.90  E-value=3.9e-09  Score=98.13  Aligned_cols=85  Identities=24%  Similarity=0.280  Sum_probs=71.8

Q ss_pred             heeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          470 AISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       470 ki~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      .+.+++.+...++..+++|||++++.+..+        +......++.+++++|++||.....+++|+|++|+||++++.
T Consensus        54 ~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~  125 (155)
T cd05120          54 PVPKVLASGESDGWSYLLMEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG  125 (155)
T ss_pred             CCCeEEEEcCCCCccEEEEEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECC
Confidence            366777777778899999999998877654        456667788999999999999644479999999999999998


Q ss_pred             CcEEEecccceee
Q 038002          550 WRAKISDFGLAKL  562 (702)
Q Consensus       550 ~~~kl~Dfg~a~~  562 (702)
                      +.++++||+.+..
T Consensus       126 ~~~~l~Df~~~~~  138 (155)
T cd05120         126 KILGIIDWEYAGY  138 (155)
T ss_pred             cEEEEEecccccC
Confidence            9999999998864

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=98.89  E-value=7.3e-09  Score=92.10  Aligned_cols=88  Identities=26%  Similarity=0.445  Sum_probs=67.1

Q ss_pred             eEEEccCCcEEEEcCC-CCeeeeeccccC-CcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCccCCCCeEEee
Q 038002           92 TLALTMDGKLILKTEE-SKEKPIADLVFD-EPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSS  169 (702)
Q Consensus        92 ~l~~~~~g~L~l~~~~-~~~~w~~~~~~~-~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~L~S~  169 (702)
                      ++.++.||+||+++.. +.++|++++... .....+.|+++|||||++.++.++|+|  .++                  
T Consensus        23 ~~~~q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S--~t~------------------   82 (114)
T smart00108       23 TLIMQNDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWSS--NTT------------------   82 (114)
T ss_pred             ccCCCCCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEEe--ccc------------------
Confidence            5667889999999765 478999987432 234789999999999999988999998  110                  


Q ss_pred             ccCCCCcccceEeeeccCCceeeeeccccccccceeecCC
Q 038002          170 VTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANG  209 (702)
Q Consensus       170 ~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g  209 (702)
                           ...|.+.+.|+.+|++++|..     ...+.|++.
T Consensus        83 -----~~~~~~~~~L~ddGnlvl~~~-----~~~~~W~Sf  112 (114)
T smart00108       83 -----GANGNYVLVLLDDGNLVIYDS-----DGNFLWQSF  112 (114)
T ss_pred             -----CCCCceEEEEeCCCCEEEECC-----CCCEEeCCC
Confidence                 135678999999999999832     224678764

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.87  E-value=5.7e-09  Score=105.64  Aligned_cols=71  Identities=21%  Similarity=0.228  Sum_probs=60.3

Q ss_pred             eEEEEecCCC-CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          484 KLLVYEFMSK-GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       484 ~~lV~e~~~~-gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      .++|||+++| .+|.+++...  .++..    .+.||+.+|++||++   ||+|+||||+|||++.++.++|+|||.+..
T Consensus       121 ~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        121 ADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             eeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            3599999997 6999998653  34433    357899999999999   999999999999999989999999998875


Q ss_pred             c
Q 038002          563 L  563 (702)
Q Consensus       563 ~  563 (702)
                      .
T Consensus       192 ~  192 (239)
T PRK01723        192 R  192 (239)
T ss_pred             C
Confidence            3

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=98.83  E-value=1.2e-08  Score=90.94  Aligned_cols=89  Identities=25%  Similarity=0.428  Sum_probs=67.9

Q ss_pred             eEEEcc-CCcEEEEcCC-CCeeeeecccc-CCcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCccCCCCeEEe
Q 038002           92 TLALTM-DGKLILKTEE-SKEKPIADLVF-DEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLS  168 (702)
Q Consensus        92 ~l~~~~-~g~L~l~~~~-~~~~w~~~~~~-~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~L~S  168 (702)
                      ++.++. ||+||+++.. +.++|++++.. ......+.|+++|||||++.++.++|+|=-  .                 
T Consensus        23 ~~~~q~~dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~~--~-----------------   83 (116)
T cd00028          23 KLIMQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWSSNT--T-----------------   83 (116)
T ss_pred             cCCCCCCeEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEEEecc--c-----------------
Confidence            455676 9999999765 47899998753 245678999999999999998999999811  0                 


Q ss_pred             eccCCCCcccceEeeeccCCceeeeeccccccccceeecCCc
Q 038002          169 SVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGT  210 (702)
Q Consensus       169 ~~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~  210 (702)
                           . +.+.+.+.|+.+|++++|...     ..+.|++..
T Consensus        84 -----~-~~~~~~~~L~ddGnlvl~~~~-----~~~~W~Sf~  114 (116)
T cd00028          84 -----R-VNGNYVLVLLDDGNLVLYDSD-----GNFLWQSFD  114 (116)
T ss_pred             -----C-CCCceEEEEeCCCCEEEECCC-----CCEEEcCCC
Confidence                 0 257789999999999998432     356788653

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.77  E-value=1.1e-08  Score=111.39  Aligned_cols=186  Identities=22%  Similarity=0.197  Sum_probs=138.0

Q ss_pred             EEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHH----HHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          474 LLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR----GLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       474 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~----aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      ....++.++..++-+|.+. .+|.++.......++....+..+.+..+    ||.++|..   +++|-|+||.||+...+
T Consensus       183 ~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~  258 (524)
T KOG0601|consen  183 DSPAWEGSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSD  258 (524)
T ss_pred             cCcccccCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccc
Confidence            4456678899999999995 6888888776655788888888888888    99999999   99999999999999988


Q ss_pred             -CcEEEecccceeecCCCCCc----eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          550 -WRAKISDFGLAKLLMPNQTG----IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       550 -~~~kl~Dfg~a~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                       ...+++|||+...+......    ......|...|++||..+ ..++.+.|||++|.++.+..++..+....-..    
T Consensus       259 ~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~----  333 (524)
T KOG0601|consen  259 WTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNS----  333 (524)
T ss_pred             cceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCC----
Confidence             88999999999987654421    122345778899999765 46789999999999999999988776433100    


Q ss_pred             hhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 038002          625 LLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVI  677 (702)
Q Consensus       625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl  677 (702)
                           .|.......    +..++......++...+..|++.+|..|++.+.+.
T Consensus       334 -----~W~~~r~~~----ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~  377 (524)
T KOG0601|consen  334 -----SWSQLRQGY----IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT  377 (524)
T ss_pred             -----Ccccccccc----CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence                 111111111    11122222344455588889999999999877665

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.77  E-value=4.1e-09  Score=120.24  Aligned_cols=181  Identities=20%  Similarity=0.190  Sum_probs=134.7

Q ss_pred             ecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEeccc
Q 038002          479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFG  558 (702)
Q Consensus       479 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg  558 (702)
                      .-....+||++|+.+++|...|+..+ ..+.+.+......+.+++++||..   .+.|+|++|.|++...++..++.||+
T Consensus       874 ~~rsP~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~  949 (1205)
T KOG0606|consen  874 PCRSPLPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFG  949 (1205)
T ss_pred             CCCCCcchhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccc
Confidence            34778899999999999999998766 455555666777889999999998   79999999999999999999999998


Q ss_pred             ceeecCC---------------------CC---------CceeeceeccccccCcccccCCCCCccccccchhHhHHHhh
Q 038002          559 LAKLLMP---------------------NQ---------TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII  608 (702)
Q Consensus       559 ~a~~~~~---------------------~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell  608 (702)
                      .......                     ..         ........+|+.|.+||...+......+|+|++|++++|.+
T Consensus       950 t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l 1029 (1205)
T KOG0606|consen  950 TLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVL 1029 (1205)
T ss_pred             cccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhh
Confidence            4332110                     00         01112356899999999999999999999999999999999


Q ss_pred             hCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 038002          609 CCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMK  674 (702)
Q Consensus       609 tG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~  674 (702)
                      +|..||.......        +.+.+..+.+.-.   ..+.+...+..+++.+.+..+|.+|-.+.
T Consensus      1030 ~g~pp~na~tpq~--------~f~ni~~~~~~~p---~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1030 TGIPPFNAETPQQ--------IFENILNRDIPWP---EGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             cCCCCCCCcchhh--------hhhccccCCCCCC---CCccccChhhhhhhhhhhccCchhccCcc
Confidence            9999997542111        1122222222111   23444556677777778899999997766

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

Probab=98.75  E-value=1.3e-08  Score=83.33  Aligned_cols=63  Identities=11%  Similarity=0.065  Sum_probs=48.2

Q ss_pred             eEEeeeccCCCCccccccCCHHhhhhhccC---CceeeEEEec--CCceeeccccc-ccccccCCccceEEEe
Q 038002          357 ITSLKITWLGGLPYAKLSVSKKDCSKSCLN---DCYFGAAFYS--DGACSKHKFPL-MFATKDQYASAILFIK  423 (702)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~---nCsC~a~~~~--~~~C~~~~~~l-~~~~~~~~~~~~~~lK  423 (702)
                      |.++..++.|+...    .+++||+++|++   ||+|.||+|.  +++|..|..++ .+.+.....+..+|+|
T Consensus        11 fl~~~~~klpd~~~----~s~~eC~~~Cl~~~~nCsC~Aya~~~~~~gC~~W~~~l~~d~~~~~~~g~~Ly~r   79 (80)
T cd00129          11 TLIKIALKIKTTKA----NTADECANRCEKNGLPFSCKAFVFAKARKQCLWFPFNSMSGVRKEFSHGFDLYEN   79 (80)
T ss_pred             EEEeecccCCcccc----cCHHHHHHHHhcCCCCCCceeeeccCCCCCeEEecCcchhhHHhccCCCceeEeE
Confidence            34444455554432    489999999999   9999999994  45899999999 7776666567788887

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.74  E-value=1.1e-07  Score=98.80  Aligned_cols=193  Identities=13%  Similarity=0.148  Sum_probs=125.1

Q ss_pred             eEEEEecCCCCC-HHHHhhcCC-----CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecc
Q 038002          484 KLLVYEFMSKGS-LADLLFNLE-----TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDF  557 (702)
Q Consensus       484 ~~lV~e~~~~gs-L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df  557 (702)
                      .-++|+.+++.. ...++.-..     ....|.-.++.++.++.+.+.||.+   |.+-||+.++|+|+.+++.+.|.|-
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVds  161 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDS  161 (637)
T ss_pred             eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcc
Confidence            667777776642 222221111     1267899999999999999999999   9999999999999999999999986


Q ss_pred             cceeecCCCCCceeeceeccccccCccccc-----CCCCCccccccchhHhHHHhhhC-CcCCcCCCCCc-----chhhh
Q 038002          558 GLAKLLMPNQTGIVAGVRGSRGYMAPEWQN-----SGLITVKSDVYSFGVVLLEIICC-RSNFEVNVSTA-----DEVLL  626 (702)
Q Consensus       558 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltG-~~Pf~~~~~~~-----~~~~~  626 (702)
                      ..-...  ..........|...|.+||.-.     +-.-+...|.|.||+++++++.| ++||.......     .+..+
T Consensus       162 Dsfqi~--~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~I  239 (637)
T COG4248         162 DSFQIN--ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDI  239 (637)
T ss_pred             cceeec--cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhh
Confidence            554443  1222234466889999999543     33456789999999999999987 99997642211     11111


Q ss_pred             HH--HHHHhh-hccccccccccccC-HHHHHHHHHHHHHcccC--CCCCCCCHHHHHHHHhCC
Q 038002          627 ST--WVYNCF-VAGEFNKLVEEEVD-KITLERMVKTGLLCIQD--EPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       627 ~~--~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~li~~cL~~--dP~~RPt~~evl~~Le~~  683 (702)
                      ..  +.+... ..+.....  .+.+ ......+..+..+|+..  ++.-|||++..+..|..+
T Consensus       240 a~g~f~ya~~~~~g~~p~P--~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al  300 (637)
T COG4248         240 AHGRFAYASDQRRGLKPPP--RSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL  300 (637)
T ss_pred             hcceeeechhccCCCCCCC--CCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence            11  111110 01111110  0111 12344556666677754  467899999998888654

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.68  E-value=3.3e-08  Score=108.90  Aligned_cols=78  Identities=26%  Similarity=0.317  Sum_probs=61.9

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHH-HHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccc
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR-GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGL  559 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~-aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~  559 (702)
                      .+..+|||||++|++|.++........   ....++.+++. .+..+|..   |++|+|+||.||+++.++.++++|||+
T Consensus       230 ~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~  303 (437)
T TIGR01982       230 TSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGI  303 (437)
T ss_pred             cCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCC
Confidence            445689999999999998875332122   23456666665 46788998   999999999999999999999999999


Q ss_pred             eeecC
Q 038002          560 AKLLM  564 (702)
Q Consensus       560 a~~~~  564 (702)
                      +..+.
T Consensus       304 ~~~l~  308 (437)
T TIGR01982       304 VGRLS  308 (437)
T ss_pred             eeECC
Confidence            98764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.53  E-value=5.6e-08  Score=107.27  Aligned_cols=154  Identities=18%  Similarity=0.197  Sum_probs=102.7

Q ss_pred             HHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCcee--------eceeccccccCcc
Q 038002          513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIV--------AGVRGSRGYMAPE  584 (702)
Q Consensus       513 ~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~--------~~~~gt~~y~aPE  584 (702)
                      ..=+.+++.|+.|+|..  .++||++|.|++|.++.++..||+.|+++...........        .-..-...|.|||
T Consensus       102 f~nl~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE  179 (700)
T KOG2137|consen  102 FANLGNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPE  179 (700)
T ss_pred             hhhhhcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccch
Confidence            33345666999999998  5999999999999999999999999998876543111100        1122456799999


Q ss_pred             cccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcc
Q 038002          585 WQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCI  663 (702)
Q Consensus       585 ~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL  663 (702)
                      ++.+...+.++|+||+|+++|.+.. |+.-+....... ......      ...+..   ..-+..+.+.++.+=+.+++
T Consensus       180 ~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~-~~~~~~------~~~~~~---~~~~s~~~p~el~~~l~k~l  249 (700)
T KOG2137|consen  180 YLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL-SYSFSR------NLLNAG---AFGYSNNLPSELRESLKKLL  249 (700)
T ss_pred             hhccccccccccceeeeeEEEEEecCCcchhhccCCcc-hhhhhh------cccccc---cccccccCcHHHHHHHHHHh
Confidence            9998888999999999999999994 544443321111 000000      000000   01122344556666666789


Q ss_pred             cCCCCCCCCHHHHHH
Q 038002          664 QDEPNLRPSMKNVIL  678 (702)
Q Consensus       664 ~~dP~~RPt~~evl~  678 (702)
                      ..++.-||++.++..
T Consensus       250 ~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  250 NGDSAVRPTLDLLLS  264 (700)
T ss_pred             cCCcccCcchhhhhc
Confidence            999999997776543

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.50  E-value=2.9e-07  Score=89.34  Aligned_cols=84  Identities=17%  Similarity=0.181  Sum_probs=63.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHH-HhhcCCCCCCHHHHHHHHHHHHHHHHhh-hhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLAD-LLFNLETRPLWRDRVRIALDVARGLLYL-HDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~~~~~~~i~~qi~~aL~~L-H~~~~~~ivH~dlkp~NIll~~  548 (702)
                      +.+.+..    ...+|||||+.+..+.. .+++.  .++..+...+..+++.+|..| |+.   +|+||||++.||++++
T Consensus        90 vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~--~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDLs~~NIL~~~  160 (197)
T cd05146          90 CPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA--KLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADLSEYNMLWHD  160 (197)
T ss_pred             CCeEEEe----cCCEEEEEEcCCCCccchhhhcc--ccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEC
Confidence            4555543    56789999997654422 22221  344556677889999999998 888   9999999999999974


Q ss_pred             CCcEEEecccceeecC
Q 038002          549 SWRAKISDFGLAKLLM  564 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~  564 (702)
                       +.+.|+|||.+....
T Consensus       161 -~~v~iIDF~qav~~~  175 (197)
T cd05146         161 -GKVWFIDVSQSVEPT  175 (197)
T ss_pred             -CcEEEEECCCceeCC
Confidence             689999999887653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.49  E-value=1.8e-07  Score=89.38  Aligned_cols=71  Identities=23%  Similarity=0.220  Sum_probs=54.7

Q ss_pred             CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcC--CCCeEecCCCCCcEEEeCCCcEEEecccc
Q 038002          482 SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC--EVQIIHCDIKLRNILIDDSWRAKISDFGL  559 (702)
Q Consensus       482 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--~~~ivH~dlkp~NIll~~~~~~kl~Dfg~  559 (702)
                      +..++||||++|.++.+.-         .....++.+++++|+.||...  ..+++|+|++|.||+++ ++.++++||+.
T Consensus        64 ~~~~lv~e~i~G~~l~~~~---------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~  133 (170)
T cd05151          64 ETGVLITEFIEGSELLTED---------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEY  133 (170)
T ss_pred             CCCeEEEEecCCCcccccc---------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccc
Confidence            3468999999998876530         111345678999999999982  12359999999999999 66899999998


Q ss_pred             eee
Q 038002          560 AKL  562 (702)
Q Consensus       560 a~~  562 (702)
                      +..
T Consensus       134 a~~  136 (170)
T cd05151         134 AGM  136 (170)
T ss_pred             ccC
Confidence            763

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.46  E-value=5e-07  Score=84.89  Aligned_cols=75  Identities=29%  Similarity=0.447  Sum_probs=64.2

Q ss_pred             EEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEe
Q 038002          476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS  555 (702)
Q Consensus       476 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~  555 (702)
                      .++-+.+...|+|||++|..|.+.+...        ...++..+-.-+.-||..   ||+|+||.++||++.... +.++
T Consensus        66 v~dvD~~~~~I~me~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~I  133 (204)
T COG3642          66 VYDVDPDNGLIVMEYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFI  133 (204)
T ss_pred             EEEEcCCCCEEEEEEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEE
Confidence            3455677888999999999999998654        256777888889999999   999999999999998764 9999


Q ss_pred             cccceee
Q 038002          556 DFGLAKL  562 (702)
Q Consensus       556 Dfg~a~~  562 (702)
                      |||++..
T Consensus       134 DfGLg~~  140 (204)
T COG3642         134 DFGLGEF  140 (204)
T ss_pred             ECCcccc
Confidence            9999874

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.41  E-value=1.4e-06  Score=96.08  Aligned_cols=129  Identities=17%  Similarity=0.227  Sum_probs=97.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |.+++...+.++..|||+|-+.  .|..++++..    .......+.||+.||.|||..|  +++|++|.-..|+|+..|
T Consensus        71 Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~----~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~G  142 (690)
T KOG1243|consen   71 ILSYLDTTEEEGTLYLVTERVR--PLETVLKELG----KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESG  142 (690)
T ss_pred             hhhhhhhhcccCceEEEeeccc--cHHHHHHHhH----HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCC
Confidence            7788888899999999999994  5777776543    5666677899999999998764  999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhC
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICC  610 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG  610 (702)
                      .-||++|..+........ ......---.|..|+.+....  -..|.|-||++++|++.|
T Consensus       143 eWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  143 EWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             cEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence            999999988764322111 011111222466666443221  456999999999999998

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.36  E-value=1.4e-06  Score=89.28  Aligned_cols=78  Identities=19%  Similarity=0.193  Sum_probs=65.9

Q ss_pred             CeeEEEEecCCCC-CHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC-------CCcE
Q 038002          482 SKKLLVYEFMSKG-SLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD-------SWRA  552 (702)
Q Consensus       482 ~~~~lV~e~~~~g-sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~-------~~~~  552 (702)
                      ...+||||++++. +|.+++... ....+......++.+++..++-||..   ||+|+|+++.|||++.       +..+
T Consensus       108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~  184 (268)
T PRK15123        108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLKL  184 (268)
T ss_pred             ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCceE
Confidence            4678999999986 899998642 22456677788999999999999999   9999999999999975       4679


Q ss_pred             EEecccceee
Q 038002          553 KISDFGLAKL  562 (702)
Q Consensus       553 kl~Dfg~a~~  562 (702)
                      .|+||+.+..
T Consensus       185 ~LIDl~r~~~  194 (268)
T PRK15123        185 SVIDLHRAQI  194 (268)
T ss_pred             EEEECCcccc
Confidence            9999998753

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.36  E-value=2.2e-07  Score=101.31  Aligned_cols=183  Identities=21%  Similarity=0.162  Sum_probs=126.3

Q ss_pred             EEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC-CcEEE
Q 038002          476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS-WRAKI  554 (702)
Q Consensus       476 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl  554 (702)
                      ..+......|+=-||++++++...+.- ...+++..++.+..|++.++.++|+.   .++|+|+||+||++..+ +.-++
T Consensus       333 ~~W~~~r~~~ip~e~~~~~s~~l~~~~-~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~  408 (524)
T KOG0601|consen  333 SSWSQLRQGYIPLEFCEGGSSSLRSVT-SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKL  408 (524)
T ss_pred             CCccccccccCchhhhcCcchhhhhHH-HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhc
Confidence            334445566799999999998887732 22477888899999999999999998   99999999999999876 78899


Q ss_pred             ecccceeecCCCCCceeeceeccccc-cCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHh
Q 038002          555 SDFGLAKLLMPNQTGIVAGVRGSRGY-MAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNC  633 (702)
Q Consensus       555 ~Dfg~a~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~  633 (702)
                      .||+.+..+.-..   ......+..| .+++......+..++|++|||.-+.|.+++..--....           .+..
T Consensus       409 ~~~~~~t~~~~~~---~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~-----------~~~~  474 (524)
T KOG0601|consen  409 GDFGCWTRLAFSS---GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV-----------QSLT  474 (524)
T ss_pred             cccccccccceec---ccccccccccccchhhccccccccccccccccccccccccCcccCcccc-----------ccee
Confidence            9999886432111   1111223334 35555566788899999999999999998875432210           0001


Q ss_pred             hhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          634 FVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       634 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      +..+...     ..+ ...+.+..+.+.++..++..||.+.++..+.+-
T Consensus       475 i~~~~~p-----~~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~  517 (524)
T KOG0601|consen  475 IRSGDTP-----NLP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEF  517 (524)
T ss_pred             eeccccc-----CCC-chHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence            1111111     111 122556666667999999999999888776654

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.34  E-value=1.7e-06  Score=80.88  Aligned_cols=84  Identities=21%  Similarity=0.324  Sum_probs=67.6

Q ss_pred             EEEecCCeeEEEEecCCC-CCHHHHhhcCCCCCCHHHH-HHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCc--
Q 038002          476 VYKHRSSKKLLVYEFMSK-GSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWR--  551 (702)
Q Consensus       476 ~~~~~~~~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~~-~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~--  551 (702)
                      .+|-+...-.|+|||++| .++.+++..........+. ..++..|-+.+.-||.+   +|+||||..+||++..++.  
T Consensus        77 l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~  153 (229)
T KOG3087|consen   77 LIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQI  153 (229)
T ss_pred             EEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcC
Confidence            455666677899999987 5888888766544444444 78899999999999999   9999999999999966553  


Q ss_pred             -EEEecccceee
Q 038002          552 -AKISDFGLAKL  562 (702)
Q Consensus       552 -~kl~Dfg~a~~  562 (702)
                       +.++|||++..
T Consensus       154 ~~~lIdfgls~~  165 (229)
T KOG3087|consen  154 TPILIDFGLSSV  165 (229)
T ss_pred             ceEEEeecchhc
Confidence             58999999864

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=98.29  E-value=7.9e-06  Score=72.38  Aligned_cols=100  Identities=23%  Similarity=0.255  Sum_probs=70.2

Q ss_pred             CeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEe-cCCCCCCCCCceEEEccCCcEEEEcCCCCeeeeeccccCC
Q 038002           42 HSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTA-NRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDE  120 (702)
Q Consensus        42 ~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~A-n~~~~~~~~~~~l~~~~~g~L~l~~~~~~~~w~~~~~~~~  120 (702)
                      +.+.+.+|.+.|-|..+|+.   -| |.  ...+++|.. +..... ...+.++|+.||||||+|..+.++|.|..  ..
T Consensus        12 ~p~~~~s~~~~L~l~~dGnL---vl-~~--~~~~~iWss~~t~~~~-~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~--~p   82 (114)
T PF01453_consen   12 SPLTSSSGNYTLILQSDGNL---VL-YD--SNGSVIWSSNNTSGRG-NSGCYLVLQDDGNLVLYDSSGNVLWQSFD--YP   82 (114)
T ss_dssp             EEEEECETTEEEEEETTSEE---EE-EE--TTTEEEEE--S-TTSS--SSEEEEEETTSEEEEEETTSEEEEESTT--SS
T ss_pred             cccccccccccceECCCCeE---EE-Ec--CCCCEEEEecccCCcc-ccCeEEEEeCCCCEEEEeecceEEEeecC--CC
Confidence            45656558899999988863   22 22  235779999 433321 15789999999999999998999999843  45


Q ss_pred             cceeEEEec--CcCEEEeecCCceEeeecCCCc
Q 038002          121 PASFASMLD--SGNFVLYSNRSGIIWESFSTPT  151 (702)
Q Consensus       121 ~~~~~~l~d--~Gnlvl~~~~~~~~WqSFd~PT  151 (702)
                      ..+.+..++  +||++ +.....+.|.|=+.|+
T Consensus        83 tdt~L~~q~l~~~~~~-~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   83 TDTLLPGQKLGDGNVT-GKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             S-EEEEEET--TSEEE-EESTSSEEEESS----
T ss_pred             ccEEEeccCcccCCCc-cccceEEeECCCCCCC
Confidence            677888888  99999 8777889999866653

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.26  E-value=2.4e-06  Score=84.52  Aligned_cols=78  Identities=28%  Similarity=0.315  Sum_probs=67.5

Q ss_pred             CeeEEEEecCCCC-CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC---cEEEecc
Q 038002          482 SKKLLVYEFMSKG-SLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW---RAKISDF  557 (702)
Q Consensus       482 ~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~---~~kl~Df  557 (702)
                      ...+||+|++++. +|.+++.... ..+......++.++++.++-||++   ||+|+|+++.|||++.+.   .+.++||
T Consensus        90 ~~s~lite~l~~~~~L~~~~~~~~-~~~~~~~~~ll~~l~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDl  165 (206)
T PF06293_consen   90 YRSYLITEALPGAQDLRDLLQQWE-QLDPSQRRELLRALARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDL  165 (206)
T ss_pred             eeEEEEEEeCCCcccHHHHHHhhc-ccchhhHHHHHHHHHHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcc
Confidence            3568999999984 8999997644 266677888999999999999999   999999999999998887   8999999


Q ss_pred             cceeec
Q 038002          558 GLAKLL  563 (702)
Q Consensus       558 g~a~~~  563 (702)
                      +.++..
T Consensus       166 d~~~~~  171 (206)
T PF06293_consen  166 DRMRFR  171 (206)
T ss_pred             hhceeC
Confidence            987753

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.02  E-value=7.6e-06  Score=79.17  Aligned_cols=83  Identities=24%  Similarity=0.324  Sum_probs=53.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCC--CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHh-hhhcCCCCeEecCCCCCcEEEe
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMS--KGSLADLLFNLETRPLWRDRVRIALDVARGLLY-LHDECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~--~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~-LH~~~~~~ivH~dlkp~NIll~  547 (702)
                      +.+.+.+.    ..+|||||++  |..+..+....   ++..+...++.+++..+.. +|..   ||+||||.+.||+++
T Consensus        72 vP~p~~~~----~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~  141 (188)
T PF01163_consen   72 VPKPYDYN----RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVD  141 (188)
T ss_dssp             S--EEEEE----TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEE
T ss_pred             CCcEEEEe----CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEee
Confidence            45554332    4579999998  65555443221   1134556677888885555 5788   999999999999999


Q ss_pred             CCCcEEEecccceeecC
Q 038002          548 DSWRAKISDFGLAKLLM  564 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~  564 (702)
                      ++ .+.|+|||.+....
T Consensus       142 ~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  142 DG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             TT-CEEE--GTTEEETT
T ss_pred             cc-eEEEEecCcceecC
Confidence            88 99999999887653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.96  E-value=1.7e-05  Score=79.13  Aligned_cols=90  Identities=23%  Similarity=0.283  Sum_probs=68.0

Q ss_pred             eeeEEEEEecC---CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcC-----------------
Q 038002          471 ISSLLVYKHRS---SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC-----------------  530 (702)
Q Consensus       471 i~~l~~~~~~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----------------  530 (702)
                      +.+++.+....   +..++||||++|.+|.+.+..  ..++..+...++.++++.|+.||+..                 
T Consensus        59 vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~  136 (223)
T cd05154          59 VPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLE  136 (223)
T ss_pred             CCCEEEECCCCCccCCceEEEEEeCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHH
Confidence            34455555443   367999999999988876542  24677777788888888888888521                 


Q ss_pred             ------------------------------------CCCeEecCCCCCcEEEeC--CCcEEEecccceee
Q 038002          531 ------------------------------------EVQIIHCDIKLRNILIDD--SWRAKISDFGLAKL  562 (702)
Q Consensus       531 ------------------------------------~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~a~~  562 (702)
                                                          ...++|+|++|.||+++.  ++.+.|+||+.+..
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         137 RQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                                                246899999999999988  56789999987764

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.94  E-value=2e-05  Score=88.16  Aligned_cols=75  Identities=23%  Similarity=0.188  Sum_probs=54.4

Q ss_pred             CCeeEEEEecCCCCCHHHHh--hcCCC---CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC----c
Q 038002          481 SSKKLLVYEFMSKGSLADLL--FNLET---RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW----R  551 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l--~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~----~  551 (702)
                      ....+|||||++|+.|.++-  ...+.   .+....+..++.|+       +..   |++|+|+||.||+++.++    +
T Consensus       233 st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f~~---GffHaDpHPGNIlv~~~g~~~~~  302 (537)
T PRK04750        233 CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------FRD---GFFHADMHPGNIFVSYDPPENPR  302 (537)
T ss_pred             CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------HhC---CeeeCCCChHHeEEecCCCCCCe
Confidence            56778999999999998753  22211   12222333344444       346   999999999999999888    9


Q ss_pred             EEEecccceeecCC
Q 038002          552 AKISDFGLAKLLMP  565 (702)
Q Consensus       552 ~kl~Dfg~a~~~~~  565 (702)
                      ++++|||+...+..
T Consensus       303 i~llDFGivg~l~~  316 (537)
T PRK04750        303 YIALDFGIVGSLNK  316 (537)
T ss_pred             EEEEecceEEECCH
Confidence            99999999987643

>smart00473 PAN_AP divergent subfamily of APPLE domains

Probab=97.86  E-value=3.2e-05  Score=63.20  Aligned_cols=67  Identities=22%  Similarity=0.254  Sum_probs=44.6

Q ss_pred             eeEEeeeccCCCCcccc-ccCCHHhhhhhccC-CceeeEEEec--CCceeecc-cccccccccCCccceEEE
Q 038002          356 NITSLKITWLGGLPYAK-LSVSKKDCSKSCLN-DCYFGAAFYS--DGACSKHK-FPLMFATKDQYASAILFI  422 (702)
Q Consensus       356 ~~~~~~~~~~~~~~~~~-~~~s~~~C~~~Cl~-nCsC~a~~~~--~~~C~~~~-~~l~~~~~~~~~~~~~~l  422 (702)
                      .|..++++.+++..... ...++++|++.|++ +|+|.||.|.  ++.|.+|. .++.+.......+..+|.
T Consensus         5 ~f~~~~~~~l~~~~~~~~~~~s~~~C~~~C~~~~~~C~s~~y~~~~~~C~l~~~~~~~~~~~~~~~~~~~y~   76 (78)
T smart00473        5 CFVRLPNTKLPGFSRIVISVASLEECASKCLNSNCSCRSFTYNNGTKGCLLWSESSLGDARLFPSGGVDLYE   76 (78)
T ss_pred             eeEEecCccCCCCcceeEcCCCHHHHHHHhCCCCCceEEEEEcCCCCEEEEeeCCccccceecccCCceeEE
Confidence            45566666666443322 22399999999999 9999999995  67999998 555554433333334443

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.74  E-value=4.2e-05  Score=74.85  Aligned_cols=68  Identities=21%  Similarity=0.216  Sum_probs=53.9

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccce
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA  560 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a  560 (702)
                      ....+|||||++|..|.+...     +++    .+...+.+++.-||+.   |++|+|.+|.|+++++++ ++++||+..
T Consensus       115 ~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~~-i~iID~~~k  181 (229)
T PF06176_consen  115 TSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNNG-IRIIDTQGK  181 (229)
T ss_pred             eeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECCc-EEEEECccc
Confidence            456679999999988876542     222    2445677889999999   999999999999998654 999999865


Q ss_pred             e
Q 038002          561 K  561 (702)
Q Consensus       561 ~  561 (702)
                      +
T Consensus       182 ~  182 (229)
T PF06176_consen  182 R  182 (229)
T ss_pred             c
Confidence            4

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=97.71  E-value=0.00034  Score=75.34  Aligned_cols=113  Identities=21%  Similarity=0.316  Sum_probs=89.4

Q ss_pred             cCCeeEEEEecCCC-CCHHHHhhcCC--------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          480 RSSKKLLVYEFMSK-GSLADLLFNLE--------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       480 ~~~~~~lV~e~~~~-gsL~~~l~~~~--------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      .+..++|||+|+++ ++|.++.+...              .+.++...+.++.|+..||.++|+.   |+.-+-|.|.+|
T Consensus       348 ~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kI  424 (655)
T KOG3741|consen  348 GDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKI  424 (655)
T ss_pred             CcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHe
Confidence            46788999999986 68888765321              2356889999999999999999999   999999999999


Q ss_pred             EEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcC
Q 038002          545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSN  613 (702)
Q Consensus       545 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~P  613 (702)
                      +++.+.+++|+..|....+..+..               |-+.   --.+-|.=.||.+++.|.||...
T Consensus       425 lv~G~~RIriS~C~i~Dvl~~d~~---------------~~le---~~Qq~D~~~lG~ll~aLAt~~~n  475 (655)
T KOG3741|consen  425 LVTGKMRIRISGCGIMDVLQEDPT---------------EPLE---SQQQNDLRDLGLLLLALATGTEN  475 (655)
T ss_pred             EeeCcceEEEecccceeeecCCCC---------------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence            999999999998888776644431               1111   12456888899999999999654

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.59  E-value=7.4e-05  Score=74.67  Aligned_cols=73  Identities=18%  Similarity=0.131  Sum_probs=53.2

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccce
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA  560 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a  560 (702)
                      -++..+|||+++|-.|...-      ++.+..-.++..|++-+.-+-..   ||+|||+++-||+++++|.+.++||--+
T Consensus       179 ~nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~dg~~~vIDwPQ~  249 (304)
T COG0478         179 WNRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTEDGDIVVIDWPQA  249 (304)
T ss_pred             cccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecCCCEEEEeCccc
Confidence            56778999999996665432      22333444555555555544455   9999999999999999999999999765


Q ss_pred             ee
Q 038002          561 KL  562 (702)
Q Consensus       561 ~~  562 (702)
                      ..
T Consensus       250 v~  251 (304)
T COG0478         250 VP  251 (304)
T ss_pred             cc
Confidence            53

>PRK09902 hypothetical protein; Provisional

Probab=97.51  E-value=0.00032  Score=68.53  Aligned_cols=79  Identities=22%  Similarity=0.119  Sum_probs=66.0

Q ss_pred             CCeeEEEEecCCC-CCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCc--EEEec
Q 038002          481 SSKKLLVYEFMSK-GSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWR--AKISD  556 (702)
Q Consensus       481 ~~~~~lV~e~~~~-gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~--~kl~D  556 (702)
                      .-+.+||+|-+++ -+|.+++.+.. .+.+..+...++.++++.++-||+.   |+.|+|+-+.||+++.++.  ++++|
T Consensus        97 ~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lID  173 (216)
T PRK09902         97 EWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLD  173 (216)
T ss_pred             ceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEE
Confidence            3457899998864 59999886543 2567778889999999999999999   9999999999999986677  99999


Q ss_pred             ccceee
Q 038002          557 FGLAKL  562 (702)
Q Consensus       557 fg~a~~  562 (702)
                      |.-++.
T Consensus       174 lEk~r~  179 (216)
T PRK09902        174 LEKSRR  179 (216)
T ss_pred             hhccch
Confidence            986653

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins

Probab=96.87  E-value=0.00098  Score=53.85  Aligned_cols=30  Identities=23%  Similarity=0.320  Sum_probs=26.5

Q ss_pred             CHHhhhhhccCCceeeEEEec--CCceeeccc
Q 038002          376 SKKDCSKSCLNDCYFGAAFYS--DGACSKHKF  405 (702)
Q Consensus       376 s~~~C~~~Cl~nCsC~a~~~~--~~~C~~~~~  405 (702)
                      +.++|++.|+.||+|.||.|.  .+.|+.+..
T Consensus        26 s~~~Cq~~C~~~~~C~afT~~~~~~~C~lk~~   57 (73)
T cd01100          26 SAEQCQAACTADPGCLAFTYNTKSKKCFLKSS   57 (73)
T ss_pred             CHHHHHHHcCCCCCceEEEEECCCCeEEcccC
Confidence            899999999999999999994  468988754

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.79  E-value=0.0035  Score=60.89  Aligned_cols=87  Identities=25%  Similarity=0.317  Sum_probs=66.9

Q ss_pred             eeEEEEEecCCeeEEEEecCCCCCHHHH---hhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          472 SSLLVYKHRSSKKLLVYEFMSKGSLADL---LFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       472 ~~l~~~~~~~~~~~lV~e~~~~gsL~~~---l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      .++++.+    ..++|.||...+++...   +.+. ...+|..+.+|+.++++.+.+|+......+.-.|++|+|+-+++
T Consensus        23 pk~lG~C----G~~~v~E~~~~~~~~~~~~~l~~~-~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~   97 (188)
T PF12260_consen   23 PKLLGSC----GRFYVVEYVGAGSLYGIYRPLSQF-LQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVND   97 (188)
T ss_pred             CCeeeEC----CCEEEEEeecCccccccccccccc-cccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeC
Confidence            4555555    23678999987765432   1111 14789999999999999999999854447999999999999999


Q ss_pred             CCcEEEecccceeec
Q 038002          549 SWRAKISDFGLAKLL  563 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~  563 (702)
                      ++++|++|...+...
T Consensus        98 ~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   98 DGRLKLIDLDDVFVE  112 (188)
T ss_pred             CCcEEEEechhcchh
Confidence            999999999877644

Proteins in this uncharacterised family are described as transmembrane proteins.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.69  E-value=0.0031  Score=70.46  Aligned_cols=84  Identities=20%  Similarity=0.292  Sum_probs=59.5

Q ss_pred             EEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEec
Q 038002          477 YKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISD  556 (702)
Q Consensus       477 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D  556 (702)
                      +.+-.+..+|+|||++|-.+.++........+.........++.  +..+-..   |++|.|.+|.||+++.++++.+.|
T Consensus       234 ~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~~q~~~d---gffHaDpHpGNi~v~~~g~i~~lD  308 (517)
T COG0661         234 YWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--LRQLLRD---GFFHADPHPGNILVRSDGRIVLLD  308 (517)
T ss_pred             ehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--HHHHHhc---CccccCCCccceEEecCCcEEEEc
Confidence            34447888999999999999998543333455333332222211  2222224   999999999999999999999999


Q ss_pred             ccceeecCC
Q 038002          557 FGLAKLLMP  565 (702)
Q Consensus       557 fg~a~~~~~  565 (702)
                      ||+...+..
T Consensus       309 fGi~g~l~~  317 (517)
T COG0661         309 FGIVGRLDP  317 (517)
T ss_pred             CcceecCCH
Confidence            999887643

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=96.57  E-value=0.004  Score=69.31  Aligned_cols=84  Identities=19%  Similarity=0.198  Sum_probs=59.4

Q ss_pred             EEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC----CCcE
Q 038002          477 YKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD----SWRA  552 (702)
Q Consensus       477 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~----~~~~  552 (702)
                      +..-....+|+||||+|..+.|.-.-....++...+..-+.+...-+-+  ..   |++|+|-+|.||++..    ++.+
T Consensus       270 y~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf--~~---GffHaDPHPGNilv~~~~~~~~~i  344 (538)
T KOG1235|consen  270 YWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIF--KT---GFFHADPHPGNILVRPNPEGDEEI  344 (538)
T ss_pred             hhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHH--hc---CCccCCCCCCcEEEecCCCCCccE
Confidence            3444678899999999998887654444456666544433333222222  22   8999999999999984    6789


Q ss_pred             EEecccceeecCC
Q 038002          553 KISDFGLAKLLMP  565 (702)
Q Consensus       553 kl~Dfg~a~~~~~  565 (702)
                      .+.|||+...+..
T Consensus       345 vllDhGl~~~is~  357 (538)
T KOG1235|consen  345 VLLDHGLYAVISH  357 (538)
T ss_pred             EEEcccccccccH
Confidence            9999999887643

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=96.50  E-value=0.01  Score=60.30  Aligned_cols=30  Identities=27%  Similarity=0.339  Sum_probs=26.6

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      ..++|+|+.|.||+++++..+.|+||+.+.
T Consensus       163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             eEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            369999999999999998778899998765

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.45  E-value=0.0063  Score=60.50  Aligned_cols=77  Identities=22%  Similarity=0.220  Sum_probs=56.3

Q ss_pred             CeeEEEEecCCCCC-HHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeCCCcEEEecccc
Q 038002          482 SKKLLVYEFMSKGS-LADLLFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDDSWRAKISDFGL  559 (702)
Q Consensus       482 ~~~~lV~e~~~~gs-L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~  559 (702)
                      .+-.|||||+.... -.-.|+..  .+...+...+..++++.+.-|-. .   ++||+||+.=|||+. ++.+.|+|++-
T Consensus       139 ~~nVLvMEfIg~~g~pAP~LkDv--~~e~~e~~~~~~~~v~~~~~l~~~a---~LVHgDLSEyNiL~~-~~~p~iID~~Q  212 (268)
T COG1718         139 RNNVLVMEFIGDDGLPAPRLKDV--PLELEEAEGLYEDVVEYMRRLYKEA---GLVHGDLSEYNILVH-DGEPYIIDVSQ  212 (268)
T ss_pred             cCCeEEEEeccCCCCCCCCcccC--CcCchhHHHHHHHHHHHHHHHHHhc---CcccccchhhheEEE-CCeEEEEECcc
Confidence            34579999995431 11112111  23334677788899999988877 5   999999999999999 78999999998


Q ss_pred             eeecC
Q 038002          560 AKLLM  564 (702)
Q Consensus       560 a~~~~  564 (702)
                      |....
T Consensus       213 aV~~~  217 (268)
T COG1718         213 AVTID  217 (268)
T ss_pred             ccccC
Confidence            87653

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=96.30  E-value=0.023  Score=57.02  Aligned_cols=29  Identities=17%  Similarity=0.232  Sum_probs=25.8

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      ..++|+|+.|.||++++++ +.|+||+.+.
T Consensus       153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       153 STCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             CceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            3678999999999999888 9999998765

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=95.76  E-value=0.026  Score=56.26  Aligned_cols=31  Identities=39%  Similarity=0.446  Sum_probs=21.8

Q ss_pred             CCeEecCCCCCcEEEe-CCCcEEEecccceee
Q 038002          532 VQIIHCDIKLRNILID-DSWRAKISDFGLAKL  562 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~-~~~~~kl~Dfg~a~~  562 (702)
                      ..++|+|+.|.||+++ +++.+.|+||+.+..
T Consensus       166 ~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             EEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             cEEEEeccccccceeeeccceeEEEecccceE
Confidence            4899999999999999 666678999987653

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=95.56  E-value=0.004  Score=69.02  Aligned_cols=135  Identities=20%  Similarity=0.080  Sum_probs=99.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCC-CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKG-SLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      .+..++-++.++...++++++.++ +-...+......+...+...+.+.-.+++++||+.   .=+|+|    ||+..+ 
T Consensus       296 ~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-  367 (829)
T KOG0576|consen  296 VVRYLEDYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-  367 (829)
T ss_pred             cccccccCCcccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-
Confidence            455556677788999999999887 33222222222344455556777778899999997   568888    777655 


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCc
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFE  615 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~  615 (702)
                      +..|..||+....+.+..  ......+++.++|||+.....+..+.|.|++|+-..++.-|.+|-.
T Consensus       368 ~~~~~~~~~v~~~L~~~~--~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  368 EEVKLLDFAVPPQLTRTM--KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             cccccccccCCcccCccc--ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence            678999999887664433  3445678999999999999999999999999998888877777654

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=95.56  E-value=0.021  Score=67.75  Aligned_cols=166  Identities=19%  Similarity=0.169  Sum_probs=111.8

Q ss_pred             EEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCC---cEEEeCCCcEEEe--cccce
Q 038002          486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR---NILIDDSWRAKIS--DFGLA  560 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~---NIll~~~~~~kl~--Dfg~a  560 (702)
                      +..|++..-++...+.... ..+....+.+..++.+||+++|+.   ...|.-+..+   +...+..+.+.+.  ||+..
T Consensus       263 v~~~~~s~~~~~~~~q~v~-~i~~~~~r~~~~~~~~GL~~~h~~---~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss  338 (1351)
T KOG1035|consen  263 VLQEICSKVELRSLLQSVG-SIPLETLRILHQKLLEGLAYLHSL---SLEHVVLSASSSKESTVDGEGVVAISLSDFDSS  338 (1351)
T ss_pred             HHHhhcCccchHHHHhhcc-ccCHHHHHHHHHHHhhhHHHHHHh---ccceeEEecccccccccCccceeecchhhhccc
Confidence            3457788888888887665 688888999999999999999998   5555555444   4444556666666  88877


Q ss_pred             eecCCCCCceeeceeccccccCcccccCCCCC--ccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccc
Q 038002          561 KLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT--VKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGE  638 (702)
Q Consensus       561 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  638 (702)
                      ...........  ...+..+.+||........  ...|+|.+|..+..+..|..+-.....                   
T Consensus       339 ~~l~d~~~~~~--~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~-------------------  397 (1351)
T KOG1035|consen  339 KPLPDNEKSFS--DLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAV-------------------  397 (1351)
T ss_pred             ccCCCcccchh--hcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccccc-------------------
Confidence            76543332221  2234567788876655444  447999999999999988765432210                   


Q ss_pred             cccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038002          639 FNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML  680 (702)
Q Consensus       639 ~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  680 (702)
                      ...+++...    ...+.+...+|+..++++|+++.+++...
T Consensus       398 ~~~~l~~~~----~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~  435 (1351)
T KOG1035|consen  398 PVSLLDVLS----TSELLDALPKCLDEDSEERLSALELLTHP  435 (1351)
T ss_pred             hhhhhcccc----chhhhhhhhhhcchhhhhccchhhhhhch
Confidence            001111111    11455667779999999999999999765

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=95.20  E-value=0.039  Score=55.69  Aligned_cols=31  Identities=26%  Similarity=0.409  Sum_probs=26.3

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      ..++|+|+.|.||+++++...-|+||+.+..
T Consensus       164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~  194 (235)
T cd05155         164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV  194 (235)
T ss_pred             ceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence            3699999999999998776667999997753

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=94.56  E-value=0.026  Score=58.12  Aligned_cols=74  Identities=18%  Similarity=0.152  Sum_probs=53.1

Q ss_pred             cCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccc
Q 038002          480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGL  559 (702)
Q Consensus       480 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~  559 (702)
                      +.++.++|||++.|-.|...-+-.    +..   .+...+..-+--|..+   |+||+|..-=||++++++.++++||--
T Consensus       179 D~~RH~Vvmelv~g~Pl~~v~~v~----d~~---~ly~~lm~~Iv~la~~---GlIHgDFNEFNimv~dd~~i~vIDFPQ  248 (465)
T KOG2268|consen  179 DHNRHCVVMELVDGYPLRQVRHVE----DPP---TLYDDLMGLIVRLANH---GLIHGDFNEFNIMVKDDDKIVVIDFPQ  248 (465)
T ss_pred             cccceeeHHHhhcccceeeeeecC----ChH---HHHHHHHHHHHHHHHc---CceecccchheeEEecCCCEEEeechH
Confidence            356789999999997776543221    222   2333344445556677   999999999999999999999999965


Q ss_pred             eeec
Q 038002          560 AKLL  563 (702)
Q Consensus       560 a~~~  563 (702)
                      ....
T Consensus       249 mvS~  252 (465)
T KOG2268|consen  249 MVST  252 (465)
T ss_pred             hhcc
Confidence            5443

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=94.53  E-value=0.0034  Score=75.66  Aligned_cols=133  Identities=13%  Similarity=0.008  Sum_probs=98.2

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCCCC---CCHHHHHHHHHHHHHHHHhhhhcCC--CCeEecCCCCCcEEEeCCCcEEEe
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLETR---PLWRDRVRIALDVARGLLYLHDECE--VQIIHCDIKLRNILIDDSWRAKIS  555 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~~~---~~~~~~~~i~~qi~~aL~~LH~~~~--~~ivH~dlkp~NIll~~~~~~kl~  555 (702)
                      ....+.+++++.+|.+.+.|-+...+   ++...+.....+.+.+..-.|....  --.+|+++|+-|.++..+..+|+.
T Consensus      1303 s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~g 1382 (2724)
T KOG1826|consen 1303 STEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLG 1382 (2724)
T ss_pred             ChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCccccc
Confidence            56678899999999999998765433   2222222223333555555554421  146899999999999999999999


Q ss_pred             cccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCC
Q 038002          556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF  614 (702)
Q Consensus       556 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf  614 (702)
                      ++|+.+.. .......+...+++.|+.|++...-.++.++|+|..|+.+|+.-.|..+|
T Consensus      1383 k~gLdKIk-np~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1383 KGGLDKIK-NPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred             cccccccc-CchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence            99999843 22333345566788999999888888888999999999999998888777

>PLN02876 acyl-CoA dehydrogenase

Probab=93.44  E-value=0.26  Score=59.30  Aligned_cols=30  Identities=30%  Similarity=0.532  Sum_probs=24.6

Q ss_pred             CeEecCCCCCcEEEeCC-Cc-EEEecccceee
Q 038002          533 QIIHCDIKLRNILIDDS-WR-AKISDFGLAKL  562 (702)
Q Consensus       533 ~ivH~dlkp~NIll~~~-~~-~kl~Dfg~a~~  562 (702)
                      .++|+|+++.||+++.+ .. .-|.||.++..
T Consensus       226 ~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~  257 (822)
T PLN02876        226 GIVHGDFRIDNLVFHPTEDRVIGILDWELSTL  257 (822)
T ss_pred             ceEecCcccccEEEcCCCCeEEEEEeeecccc
Confidence            59999999999999753 33 57999988765

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=93.40  E-value=0.16  Score=53.38  Aligned_cols=75  Identities=19%  Similarity=0.203  Sum_probs=58.1

Q ss_pred             cCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccc
Q 038002          480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGL  559 (702)
Q Consensus       480 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~  559 (702)
                      +....|++|++- |++|.-.     ....++++..++.+.+.-+.-+...  ...-|||+.-.||||+ +|++.|+||-+
T Consensus       297 e~~y~yl~~kdh-gt~is~i-----k~~~~~e~lsff~s~~sil~~lekk--f~fehrnlt~~niLId-~GnvtLIDfkl  367 (488)
T COG5072         297 ETLYLYLHFKDH-GTPISII-----KADRSEEELSFFWSCISILDILEKK--FPFEHRNLTLDNILID-EGNVTLIDFKL  367 (488)
T ss_pred             CceEEEEEEecC-Cceeeee-----ecccHHHHHHHHHHHHHHHhhhhhc--CCcccccccccceeee-cCceEEEEeee
Confidence            345566777775 4444321     1345788999999988888888776  5889999999999999 99999999999


Q ss_pred             eeec
Q 038002          560 AKLL  563 (702)
Q Consensus       560 a~~~  563 (702)
                      ++.-
T Consensus       368 sRl~  371 (488)
T COG5072         368 SRLS  371 (488)
T ss_pred             eecc
Confidence            9853

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=92.96  E-value=0.15  Score=48.19  Aligned_cols=101  Identities=16%  Similarity=0.133  Sum_probs=63.1

Q ss_pred             ccceEEEeEE--EEEeeeehhhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCCCCHHH
Q 038002          447 DKRKLLTVLA--GCLGSITFLCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSKGSLAD  498 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~~~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~gsL~~  498 (702)
                      ..+.|++|.+  ||++......+|+|                          -.+++.|    +..++.|||+.|..|.+
T Consensus        26 v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~y----g~~~i~me~i~G~~L~~  101 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFY----GEDFIRMEYIDGRPLGK  101 (201)
T ss_pred             hhhhhhcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEe----chhhhhhhhhcCcchhh
Confidence            3455666654  88877776666666                          1222222    23345599999988877


Q ss_pred             HhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCC-CCcEEEeCCCcEEEecccceee
Q 038002          499 LLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIK-LRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       499 ~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlk-p~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      .-...    +    .+-...+++.---|...   ||-|+.|+ |..+++-.+..+.|+||..|..
T Consensus       102 ~~~~~----~----rk~l~~vlE~a~~LD~~---GI~H~El~~~~k~vlv~~~~~~iIDFd~At~  155 (201)
T COG2112         102 LEIGG----D----RKHLLRVLEKAYKLDRL---GIEHGELSRPWKNVLVNDRDVYIIDFDSATF  155 (201)
T ss_pred             hhhcc----c----HHHHHHHHHHHHHHHHh---ccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence            65422    1    12233455554445555   99999986 5555555555999999998874

>PRK10593 hypothetical protein; Provisional

Probab=92.72  E-value=0.47  Score=49.69  Aligned_cols=28  Identities=21%  Similarity=0.364  Sum_probs=21.6

Q ss_pred             CCCeEecCCCCCcEEEeCC-Cc-EEEeccc
Q 038002          531 EVQIIHCDIKLRNILIDDS-WR-AKISDFG  558 (702)
Q Consensus       531 ~~~ivH~dlkp~NIll~~~-~~-~kl~Dfg  558 (702)
                      ...++|||+.+.||+++.+ +. +.|+|..
T Consensus       192 ~psLlHGDlw~gNvl~~~~~~~i~~liDPa  221 (297)
T PRK10593        192 NCVLVHGNFTLRSMLKDPRSDQLLAMLNPG  221 (297)
T ss_pred             CCeeEeCCCCcccEEECCCCCceEEEECch
Confidence            4589999999999999865 33 5677654

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=91.96  E-value=0.82  Score=44.71  Aligned_cols=80  Identities=21%  Similarity=0.217  Sum_probs=56.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCC------CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSK------GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~------gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |.+++++-+++.-.-+|+|.+..      .+|.+++++..  ++. +   +...+-+-.++|-++   .|+.+|++|.||
T Consensus        79 i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~--~~~-~---~~~~L~~f~~~l~~~---~Iv~~dl~~~NI  149 (199)
T PF10707_consen   79 IPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG--LTE-E---LRQALDEFKRYLLDH---HIVIRDLNPHNI  149 (199)
T ss_pred             cccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC--ccH-H---HHHHHHHHHHHHHHc---CCeecCCCcccE
Confidence            67888999999999999998743      47888885543  443 2   333334445677777   999999999999


Q ss_pred             EEeCCC----cEEEec-ccc
Q 038002          545 LIDDSW----RAKISD-FGL  559 (702)
Q Consensus       545 ll~~~~----~~kl~D-fg~  559 (702)
                      ++....    .+.|+| ||.
T Consensus       150 v~~~~~~~~~~lvlIDG~G~  169 (199)
T PF10707_consen  150 VVQRRDSGEFRLVLIDGLGE  169 (199)
T ss_pred             EEEecCCCceEEEEEeCCCC
Confidence            994332    467776 443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=91.21  E-value=0.44  Score=50.02  Aligned_cols=32  Identities=28%  Similarity=0.412  Sum_probs=28.9

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                      ..++|||+++.||+++....+-|+||+++..-
T Consensus       198 ~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG  229 (321)
T COG3173         198 PVLVHGDYRPGNLIIDPGRPTGVLDWELATLG  229 (321)
T ss_pred             ceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence            47999999999999999988999999998753

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=89.90  E-value=0.54  Score=47.17  Aligned_cols=30  Identities=23%  Similarity=0.356  Sum_probs=26.6

Q ss_pred             CCeEecCCCCCcEEEeC-CCcEEEeccccee
Q 038002          532 VQIIHCDIKLRNILIDD-SWRAKISDFGLAK  561 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~-~~~~kl~Dfg~a~  561 (702)
                      ..++|+|+.+.||++++ ++.+.|+||..+.
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            37999999999999998 5789999998765

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=89.46  E-value=0.65  Score=48.63  Aligned_cols=31  Identities=29%  Similarity=0.373  Sum_probs=27.3

Q ss_pred             CCCeEecCCCCCcEEEeCC----CcEEEeccccee
Q 038002          531 EVQIIHCDIKLRNILIDDS----WRAKISDFGLAK  561 (702)
Q Consensus       531 ~~~ivH~dlkp~NIll~~~----~~~kl~Dfg~a~  561 (702)
                      ...++|+|+.|.||+++++    +.++++||..+.
T Consensus       178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            4589999999999999875    789999998775

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=89.24  E-value=1  Score=44.33  Aligned_cols=101  Identities=18%  Similarity=0.071  Sum_probs=62.4

Q ss_pred             cCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccc
Q 038002          480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGL  559 (702)
Q Consensus       480 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~  559 (702)
                      ++...-+|.|+|-..           +..   -..++..-+.+|.-.|+.. .+.+|||..|+||+-|..|.+||.|-+.
T Consensus       125 n~~~yGvIlE~Cy~~-----------~i~---~~N~i~agi~~L~~fH~~~-~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  125 NNYKYGVILERCYKI-----------KIN---FSNFITAGIKDLMDFHSEN-QHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             CCceeEEEEeeccCc-----------ccc---hhHHHHHhHHHHHHhhccC-CCeecCCCChhheeecCCCCEEecChhh
Confidence            556667899998431           111   1122233356788888542 4899999999999999999999999653


Q ss_pred             eeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCC
Q 038002          560 AKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCR  611 (702)
Q Consensus       560 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~  611 (702)
                      -..             .+..|.--|   ....+.++.+-+|=.-+++++...
T Consensus       190 Ll~-------------~~V~~vN~~---Y~~lT~~aE~~~fv~s~l~~v~~~  225 (308)
T PF07387_consen  190 LLE-------------NQVNMVNIE---YESLTQEAEVKVFVKSCLKLVEKQ  225 (308)
T ss_pred             hhh-------------heeeEEeee---ccccChHHHHHHHHHHHHHHHHHH
Confidence            321             011122211   123456677777766777776544

The function of this family is unknown.

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=89.21  E-value=0.49  Score=49.76  Aligned_cols=30  Identities=30%  Similarity=0.370  Sum_probs=27.0

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      .+++|+|+++.||+++.++...|+||+.+.
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            499999999999999998877899998765

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK05231 homoserine kinase; Provisional

Probab=88.97  E-value=0.71  Score=48.79  Aligned_cols=30  Identities=27%  Similarity=0.359  Sum_probs=26.2

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      .+++|+|+.|.||+++.+...-|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            389999999999999977666899999775

>smart00223 APPLE APPLE domain

Probab=88.59  E-value=0.47  Score=38.78  Aligned_cols=43  Identities=16%  Similarity=0.188  Sum_probs=31.6

Q ss_pred             eccCCCCccccccC-CHHhhhhhccCCceeeEEEe--cCC---ceeecc
Q 038002          362 ITWLGGLPYAKLSV-SKKDCSKSCLNDCYFGAAFY--SDG---ACSKHK  404 (702)
Q Consensus       362 ~~~~~~~~~~~~~~-s~~~C~~~Cl~nCsC~a~~~--~~~---~C~~~~  404 (702)
                      ++++.+.+...... +.++|++.|..+=.|.+|.|  .+.   .|+.+.
T Consensus         8 ~~df~G~Dl~~~~~~~~~~Cq~~Ct~~~~C~~FTf~~~~~~~~~C~LK~   56 (79)
T smart00223        8 NVDFRGSDINTVYVPSAQVCQKRCTSHPRCLFFTFSTNEPPEEKCLLKD   56 (79)
T ss_pred             CccccCceeeeeecCCHHHHHHhhcCCCCccEEEeeCCCCCCCEeEeCc
Confidence            45555555444333 99999999999999999999  344   687764

Four-fold repeat in plasma kallikrein and coagulation factor XI. Factor XI apple 3 mediates binding to platelets. Factor XI apple 1 binds high-molecular-mass kininogen. Apple 4 in factor XI mediates dimer formation and binds to factor XIIa. Mutations in apple 4 cause factor XI deficiency, an inherited bleeding disorder.

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=88.06  E-value=0.92  Score=47.65  Aligned_cols=29  Identities=28%  Similarity=0.381  Sum_probs=25.5

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      .+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            48999999999999988 678999998654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=86.92  E-value=0.74  Score=48.01  Aligned_cols=30  Identities=30%  Similarity=0.375  Sum_probs=26.8

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      .+++|+|+.|.||++++++.+.|+||+.+.
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            379999999999999998778899998765

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=86.74  E-value=1.9  Score=45.74  Aligned_cols=76  Identities=20%  Similarity=0.249  Sum_probs=55.6

Q ss_pred             eeEEEEecCCCCCH-HHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          483 KKLLVYEFMSKGSL-ADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       483 ~~~lV~e~~~~gsL-~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      ..+|||+|+-.-.. .-.|+.  ..++...+..+-.|++.-+.-|-+.|  ++||.||+--|+|+. +|.+.|+|.+-+.
T Consensus       238 ~hVLVM~FlGrdgw~aPkLKd--~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Lyh-dG~lyiIDVSQSV  312 (520)
T KOG2270|consen  238 NHVLVMEFLGRDGWAAPKLKD--ASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLYH-DGKLYIIDVSQSV  312 (520)
T ss_pred             cceEeeeeccCCCCcCccccc--ccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheEE-CCEEEEEEccccc
Confidence            34799999943211 111221  13666778888889999999888876  899999999999875 5689999988766


Q ss_pred             ec
Q 038002          562 LL  563 (702)
Q Consensus       562 ~~  563 (702)
                      ..
T Consensus       313 E~  314 (520)
T KOG2270|consen  313 EH  314 (520)
T ss_pred             cC
Confidence            43

>PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A

Probab=85.41  E-value=0.51  Score=34.57  Aligned_cols=22  Identities=23%  Similarity=0.409  Sum_probs=17.5

Q ss_pred             CHHhhhhhccCCceeeEEEecC
Q 038002          376 SKKDCSKSCLNDCYFGAAFYSD  397 (702)
Q Consensus       376 s~~~C~~~Cl~nCsC~a~~~~~  397 (702)
                      +.++|.+.|..+=.|.+|.|..
T Consensus        17 s~~~C~~~C~~~~~C~~~~~~~   38 (51)
T PF14295_consen   17 SPEECQAACAADPGCQAFTFNP   38 (51)
T ss_dssp             -HHHHHHHHHTSTT--EEEEET
T ss_pred             CHHHHHHHccCCCCCCEEEEEC
Confidence            8999999999999999999943

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=84.99  E-value=1.7  Score=46.04  Aligned_cols=28  Identities=39%  Similarity=0.522  Sum_probs=25.6

Q ss_pred             eEecCCCCCcEEEeCCCc-EEEeccccee
Q 038002          534 IIHCDIKLRNILIDDSWR-AKISDFGLAK  561 (702)
Q Consensus       534 ivH~dlkp~NIll~~~~~-~kl~Dfg~a~  561 (702)
                      +||+|+.|.||+++.+.. ..++||+.+.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccc
Confidence            999999999999998885 8999999775

>PRK10271 thiK thiamine kinase; Provisional

Probab=84.99  E-value=0.79  Score=44.18  Aligned_cols=29  Identities=21%  Similarity=0.268  Sum_probs=25.6

Q ss_pred             CeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          533 QIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       533 ~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      ..+|+|+.|.||++.+++ ++|+||+.+..
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCcccC
Confidence            679999999999998877 89999998753

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=84.24  E-value=1.1  Score=46.97  Aligned_cols=37  Identities=32%  Similarity=0.388  Sum_probs=23.5

Q ss_pred             HHHHHHHHHHHHHhhhhc-CCCCeEecCCCCCcEEEeC
Q 038002          512 RVRIALDVARGLLYLHDE-CEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       512 ~~~i~~qi~~aL~~LH~~-~~~~ivH~dlkp~NIll~~  548 (702)
                      +..++.||+.-.--.-+. |....+|-||||+|||+-+
T Consensus       277 vkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFd  314 (434)
T PF05445_consen  277 VKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFD  314 (434)
T ss_pred             HHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEec
Confidence            344666775543212222 2348999999999999943

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=82.98  E-value=0.84  Score=36.79  Aligned_cols=30  Identities=23%  Similarity=0.443  Sum_probs=25.8

Q ss_pred             CHHhhhhhccCCce-eeEEEec--CCceeeccc
Q 038002          376 SKKDCSKSCLNDCY-FGAAFYS--DGACSKHKF  405 (702)
Q Consensus       376 s~~~C~~~Cl~nCs-C~a~~~~--~~~C~~~~~  405 (702)
                      ++++|...|+.+-. |.+|.|.  ...|.+...
T Consensus        24 s~~~C~~~C~~~~~~C~s~~y~~~~~~C~L~~~   56 (79)
T PF00024_consen   24 SLEECAQLCLNEPRRCKSFNYDPSSKTCYLSSS   56 (79)
T ss_dssp             SHHHHHHHHHHSTT-ESEEEEETTTTEEEEECS
T ss_pred             CHHHHHhhcCcCcccCCeEEEECCCCEEEEcCC
Confidence            99999999999999 9999994  458887643

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs It has been shown that, the N-terminal N domains of members of the plasminogen/hepatocyte growth factor family, the apple domains of the plasma prekallikrein/coagulation factor XI family, and domains of various nematode proteins belong to the same module superfamily, the PAN module []. PAN contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge that links the N and C termini of the domain.; PDB: 1GP9_C 2QJ2_B 1GMO_H 1NK1_B 3MKP_B 1BHT_B 3HN4_A 1GMN_A 3HMS_A 3HMT_B ....

>TIGR02721 ycfN_thiK thiamine kinase

Probab=82.59  E-value=1  Score=45.99  Aligned_cols=30  Identities=20%  Similarity=0.316  Sum_probs=25.9

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      ..++|+|+.|.||++++++ +.|+||..+..
T Consensus       146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             CeeecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence            3699999999999999877 78999987753

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	702
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-36
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		3e-36
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		3e-27
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		4e-27
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		4e-23
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		7e-23
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		3e-22
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-20
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		4e-15
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		4e-15
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		9e-15
3a4o_X	286	Lyn Kinase Domain Length = 286		1e-14
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-14
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-14
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-14
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-14
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		2e-14
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		2e-14
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		2e-14
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-14
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		2e-14
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		2e-14
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		2e-14
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		2e-14
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		3e-14
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		9e-14
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-13
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-13
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-13
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-13
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		2e-13
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		2e-13
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-13
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		3e-13
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		4e-13
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		4e-13
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		6e-13
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		6e-13
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		6e-13
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		6e-13
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		6e-13
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		7e-13
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		7e-13
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		9e-13
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		1e-12
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-12
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-12
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-12
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-12
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		1e-12
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		2e-12
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		2e-12
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		2e-12
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		2e-12
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		3e-12
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		3e-12
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		3e-12
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		3e-12
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		3e-12
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		3e-12
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		3e-12
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		3e-12
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		3e-12
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		3e-12
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		3e-12
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		4e-12
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		5e-12
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-12
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		6e-12
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		6e-12
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-12
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-12
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		6e-12
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		9e-12
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		1e-11
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		1e-11
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		2e-11
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		2e-11
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-11
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		3e-11
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		3e-11
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		3e-11
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		3e-11
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		4e-11
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		4e-11
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		4e-11
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		5e-11
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		8e-11
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		8e-11
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		8e-11
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		9e-11
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		1e-10
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		1e-10
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		1e-10
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-10
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-10
1fvr_A	327	Tie2 Kinase Domain Length = 327		2e-10
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		2e-10
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-10
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-10
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-10
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		2e-10
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-10
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		3e-10
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		3e-10
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		3e-10
3a7f_A	303	Human Mst3 Kinase Length = 303		3e-10
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		3e-10
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		4e-10
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		4e-10
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		4e-10
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		5e-10
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		5e-10
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-10
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		5e-10
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		5e-10
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		5e-10
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		6e-10
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		6e-10
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		6e-10
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		7e-10
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		7e-10
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		8e-10
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		9e-10
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		9e-10
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-10
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		9e-10
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-09
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		1e-09
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-09
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		1e-09
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		1e-09
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		1e-09
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		1e-09
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		1e-09
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		1e-09
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-09
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		1e-09
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		1e-09
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		1e-09
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		1e-09
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		1e-09
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-09
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		1e-09
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		1e-09
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		1e-09
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		1e-09
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		1e-09
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		1e-09
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-09
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-09
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		1e-09
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		1e-09
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-09
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		1e-09
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		1e-09
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-09
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		2e-09
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-09
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		2e-09
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		2e-09
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		2e-09
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-09
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		2e-09
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		2e-09
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		2e-09
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		2e-09
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		2e-09
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		3e-09
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-09
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-09
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		4e-09
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		4e-09
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		4e-09
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		4e-09
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		4e-09
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		4e-09
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		4e-09
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		4e-09
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		4e-09
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		5e-09
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		5e-09
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		5e-09
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		5e-09
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		5e-09
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-09
4h58_A	275	Braf In Complex With Compound 3 Length = 275		5e-09
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-09
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		5e-09
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		5e-09
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		5e-09
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		5e-09
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		5e-09
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		5e-09
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		6e-09
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		6e-09
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		6e-09
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-09
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		6e-09
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-09
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		6e-09
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		6e-09
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		6e-09
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-09
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		6e-09
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		6e-09
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		6e-09
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		6e-09
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		6e-09
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		6e-09
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		7e-09
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-09
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		7e-09
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		7e-09
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-09
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		7e-09
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		7e-09
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		7e-09
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		7e-09
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		8e-09
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		8e-09
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-09
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		8e-09
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		9e-09
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		9e-09
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		9e-09
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		9e-09
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		9e-09
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		9e-09
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-08
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		1e-08
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		1e-08
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		1e-08
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-08
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		1e-08
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		1e-08
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		1e-08
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		1e-08
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		1e-08
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		1e-08
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		1e-08
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		1e-08
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		1e-08
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		1e-08
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		1e-08
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-08
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		2e-08
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-08
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		2e-08
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		2e-08
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		2e-08
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		2e-08
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-08
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-08
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		2e-08
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		2e-08
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		2e-08
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		2e-08
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		3e-08
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		3e-08
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		3e-08
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		3e-08
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		3e-08
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-08
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		3e-08
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		3e-08
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-08
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-08
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		3e-08
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		3e-08
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		3e-08
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		3e-08
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		3e-08
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		3e-08
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		3e-08
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		3e-08
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		3e-08
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		3e-08
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		3e-08
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		3e-08
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		3e-08
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		3e-08
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		3e-08
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		4e-08
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		4e-08
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		4e-08
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		4e-08
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		4e-08
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		4e-08
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		4e-08
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-08
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		4e-08
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		4e-08
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-08
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		4e-08
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		4e-08
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-08
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		4e-08
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		5e-08
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		5e-08
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		5e-08
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		6e-08
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		6e-08
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		6e-08
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		6e-08
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		7e-08
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		7e-08
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		7e-08
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		7e-08
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		7e-08
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		7e-08
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		7e-08
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		8e-08
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		8e-08
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		8e-08
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-07
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		1e-07
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-07
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		1e-07
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		1e-07
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		1e-07
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		1e-07
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-07
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-07
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		1e-07
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		1e-07
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-07
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-07
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-07
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		1e-07
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		1e-07
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-07
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		1e-07
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		1e-07
3b2t_A	311	Structure Of Phosphotransferase Length = 311		1e-07
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		2e-07
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		2e-07
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		2e-07
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		2e-07
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		2e-07
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-07
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		2e-07
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		2e-07
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		2e-07
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		2e-07
4fl3_A	635	Structural And Biophysical Characterization Of The		2e-07
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		2e-07
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-07
4fl2_A	636	Structural And Biophysical Characterization Of The		2e-07
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-07
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		2e-07
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		2e-07
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		2e-07
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-07
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-07
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-07
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-07
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-07
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-07
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-07
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		2e-07
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-07
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-07
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		2e-07
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		3e-07
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-07
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		3e-07
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		3e-07
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		3e-07
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		3e-07
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		3e-07
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		3e-07
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		3e-07
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-07
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		4e-07
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		4e-07
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		4e-07
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		4e-07
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		4e-07
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		4e-07
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		4e-07
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		4e-07
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		4e-07
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		4e-07
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-07
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		4e-07
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		4e-07
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		4e-07
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-07
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		4e-07
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-07
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-07
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		4e-07
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		4e-07
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		5e-07
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		5e-07
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		5e-07
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		5e-07
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		5e-07
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		5e-07
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-07
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		5e-07
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		5e-07
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		5e-07
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		5e-07
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		6e-07
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		6e-07
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		6e-07
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		6e-07
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		6e-07
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		7e-07
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		7e-07
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		7e-07
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		7e-07
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		7e-07
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		7e-07
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		7e-07
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		8e-07
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		8e-07
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		8e-07
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		8e-07
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		8e-07
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		8e-07
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		8e-07
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		8e-07
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		8e-07
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		9e-07
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		9e-07
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		9e-07
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		9e-07
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		9e-07
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		9e-07
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		9e-07
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		9e-07
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		9e-07
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		1e-06
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		1e-06
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		1e-06
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		1e-06
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		1e-06
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-06
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		1e-06
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		1e-06
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		1e-06
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		1e-06
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		1e-06
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-06
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		1e-06
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		1e-06
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		1e-06
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		1e-06
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		1e-06
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		1e-06
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		1e-06
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		1e-06
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		1e-06
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		1e-06
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		1e-06
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		1e-06
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		1e-06
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-06
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		2e-06
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-06
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-06
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-06
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-06
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-06
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-06
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		2e-06
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-06
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-06
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-06
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-06
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-06
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-06
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-06
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-06
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		2e-06
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		2e-06
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-06
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-06
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-06
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-06
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-06
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-06
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-06
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		2e-06
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-06
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-06
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-06
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-06
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		2e-06
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		2e-06
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-06
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-06
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-06
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-06
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-06
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-06
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-06
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		2e-06
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-06
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-06
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-06
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		2e-06
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-06
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-06
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		2e-06
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		2e-06
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-06
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-06
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-06
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		2e-06
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		2e-06
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		2e-06
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-06
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		2e-06
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-06
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		2e-06
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		2e-06
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		2e-06
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		2e-06
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		2e-06
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		2e-06
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-06
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		3e-06
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		3e-06
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		3e-06
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		3e-06
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		3e-06
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		3e-06
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		3e-06
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		3e-06
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		3e-06
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		3e-06
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		3e-06
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		4e-06
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		4e-06
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		4e-06
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		4e-06
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		4e-06
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-06
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		4e-06
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-06
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		4e-06
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		4e-06
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		4e-06
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		4e-06
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		4e-06
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		4e-06
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		4e-06
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		4e-06
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-06
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		4e-06
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		4e-06
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		4e-06
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		5e-06
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		5e-06
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		5e-06
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		5e-06
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		5e-06
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		5e-06
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		6e-06
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		6e-06
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		6e-06
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		6e-06
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		6e-06
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		6e-06
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		6e-06
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-06
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		7e-06
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		7e-06
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		7e-06
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		7e-06
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		7e-06
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		7e-06
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		7e-06
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		7e-06
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		7e-06
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		7e-06
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		7e-06
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		8e-06
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		8e-06
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		8e-06
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		8e-06
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		8e-06
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		8e-06
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		8e-06
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		8e-06
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		8e-06
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		9e-06
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		9e-06
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		9e-06
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		9e-06
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		9e-06
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		9e-06
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		1e-05
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		1e-05
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		1e-05
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-05
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		1e-05
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-05
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		1e-05
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-05
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		1e-05
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		1e-05
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		1e-05
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		1e-05
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		1e-05
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		1e-05
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		1e-05
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-05
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-05
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-05
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		1e-05
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		1e-05
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-05
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-05
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-05
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		2e-05
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-05
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-05
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-05
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		2e-05
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		2e-05
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-05
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		2e-05
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-05
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-05
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-05
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		2e-05
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		2e-05
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		2e-05
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-05
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		2e-05
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		2e-05
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-05
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		2e-05
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		2e-05
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		2e-05
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-05
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		2e-05
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		3e-05
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-05
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		3e-05
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		3e-05
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		3e-05
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		3e-05
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		3e-05
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		3e-05
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		3e-05
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		3e-05
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		3e-05
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		3e-05
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		3e-05
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		3e-05
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		3e-05
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		3e-05
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		4e-05
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		4e-05
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		4e-05
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		4e-05
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		4e-05
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		5e-05
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		5e-05
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		5e-05
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		5e-05
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		5e-05
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		5e-05
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		5e-05
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		5e-05
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		6e-05
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		6e-05
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		6e-05
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		7e-05
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		7e-05
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		7e-05
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		7e-05
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		7e-05
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		7e-05
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		7e-05
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		7e-05
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		8e-05
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		8e-05
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		9e-05
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		9e-05
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		9e-05
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		9e-05
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-04
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		1e-04
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		1e-04
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		1e-04
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-04
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		1e-04
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-04
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		2e-04
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		2e-04
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-04
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		2e-04
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		2e-04
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		2e-04
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		2e-04
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-04
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		2e-04
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		2e-04
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		2e-04
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-04
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		2e-04
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-04
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		2e-04
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		2e-04
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		2e-04
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		2e-04
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-04
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-04
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-04
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		2e-04
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		2e-04
4exu_A	371	Mapk13, Inactive Form Length = 371		2e-04
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		2e-04
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		2e-04
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		2e-04
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		2e-04
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		2e-04
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		2e-04
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-04
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		3e-04
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		3e-04
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-04
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		3e-04
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		3e-04
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		3e-04
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-04
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		3e-04
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-04
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-04
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-04
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		4e-04
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		5e-04
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		5e-04
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		5e-04
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		5e-04
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		6e-04
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		6e-04
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		6e-04
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		6e-04
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		6e-04
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		6e-04
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		6e-04
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		6e-04
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		6e-04
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		6e-04
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		7e-04
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		7e-04
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		7e-04
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		7e-04
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		7e-04
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		7e-04
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		8e-04
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		8e-04
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		8e-04
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		8e-04
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		8e-04
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		8e-04
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		8e-04
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		8e-04
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		8e-04
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		8e-04
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		8e-04
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		8e-04
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-04
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		8e-04
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		8e-04
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		8e-04
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		8e-04
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		9e-04
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		9e-04
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  151 bits (381), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 128/209 (61%), Gaps = 8/209 (3%)
Query: 482 SKKLLVYEFMSKGSLADLLFNL-ETRPL--WRDRVRIALDVARGLLYLHDECEVQIIHCD 538
           +++LLVY +M+ GS+A  L    E++P   W  R RIAL  ARGL YLHD C+ +IIH D
Sbjct: 108 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRD 167
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           +K  NIL+D+ + A + DFGLAKL+      +   VRG+ G++APE+ ++G  + K+DV+
Sbjct: 168 VKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVF 227
Query: 599 SFGVVLLEIICCRSNFEV-NVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD----KITLE 653
            +GV+LLE+I  +  F++  ++  D+V+L  WV       +   LV+ ++        +E
Sbjct: 228 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVE 287
Query: 654 RMVKTGLLCIQDEPNLRPSMKNVILMLEG 682
           ++++  LLC Q  P  RP M  V+ MLEG
Sbjct: 288 QLIQVALLCTQSSPMERPKMSEVVRMLEG 316

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  150 bits (378), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 127/209 (60%), Gaps = 8/209 (3%)
Query: 482 SKKLLVYEFMSKGSLADLLFNL-ETRPL--WRDRVRIALDVARGLLYLHDECEVQIIHCD 538
           +++LLVY +M+ GS+A  L    E++P   W  R RIAL  ARGL YLHD C+ +IIH D
Sbjct: 100 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRD 159
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           +K  NIL+D+ + A + DFGLAKL+      +   VRG  G++APE+ ++G  + K+DV+
Sbjct: 160 VKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVF 219
Query: 599 SFGVVLLEIICCRSNFEV-NVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD----KITLE 653
            +GV+LLE+I  +  F++  ++  D+V+L  WV       +   LV+ ++        +E
Sbjct: 220 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVE 279
Query: 654 RMVKTGLLCIQDEPNLRPSMKNVILMLEG 682
           ++++  LLC Q  P  RP M  V+ MLEG
Sbjct: 280 QLIQVALLCTQSSPMERPKMSEVVRMLEG 308

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  120 bits (301), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 127/230 (55%), Gaps = 12/230 (5%)
Query: 465 LCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLF--NLETRPL-WRDRVRIALDVAR 521
            C    + SL+ +    ++ +L+Y++M  G+L   L+  +L T  + W  R+ I +  AR
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGY 580
           GL YLH      IIH D+K  NIL+D+++  KI+DFG++K     +QT +   V+G+ GY
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 581 MAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFN 640
           + PE+   G +T KSDVYSFGVVL E++C RS   V     + V L+ W       G+  
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVESHNNGQLE 266
Query: 641 KLVEEEV-DKITLERMVK---TGLLCIQDEPNLRPSMKNVILMLEGTMEI 686
           ++V+  + DKI  E + K   T + C+      RPSM +V+  LE  + +
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 126/230 (54%), Gaps = 12/230 (5%)
Query: 465 LCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLF--NLETRPL-WRDRVRIALDVAR 521
            C    + SL+ +    ++ +L+Y++M  G+L   L+  +L T  + W  R+ I +  AR
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGY 580
           GL YLH      IIH D+K  NIL+D+++  KI+DFG++K      QT +   V+G+ GY
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 581 MAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFN 640
           + PE+   G +T KSDVYSFGVVL E++C RS   V     + V L+ W       G+  
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVESHNNGQLE 266
Query: 641 KLVEEEV-DKITLERMVK---TGLLCIQDEPNLRPSMKNVILMLEGTMEI 686
           ++V+  + DKI  E + K   T + C+      RPSM +V+  LE  + +
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  106 bits (265), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 108/202 (53%), Gaps = 12/202 (5%)
Query: 486 LVYEFMSKGSLADLLFNLE-TRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           LVY +M  GSL D L  L+ T PL W  R +IA   A G+ +LH   E   IH DIK  N
Sbjct: 107 LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSAN 163
Query: 544 ILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           IL+D+++ AKISDFGLA+      QT + + + G+  YMAPE    G IT KSD+YSFGV
Sbjct: 164 ILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGV 222
Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE---EVDKITLERMVKTG 659
           VLLEII       V+     ++LL                +++   + D  ++E M    
Sbjct: 223 VLLEIITGLP--AVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVA 280
Query: 660 LLCIQDEPNLRPSMKNVILMLE 681
             C+ ++ N RP +K V  +L+
Sbjct: 281 SQCLHEKKNKRPDIKKVQQLLQ 302

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  105 bits (263), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 486 LVYEFMSKGSLADLLFNLE-TRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           LVY +M  GSL D L  L+ T PL W  R +IA   A G+ +LH   E   IH DIK  N
Sbjct: 107 LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSAN 163
Query: 544 ILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           IL+D+++ AKISDFGLA+      QT +   + G+  YMAPE    G IT KSD+YSFGV
Sbjct: 164 ILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGV 222
Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE---EVDKITLERMVKTG 659
           VLLEII       V+     ++LL                +++   + D  ++E M    
Sbjct: 223 VLLEIITGLP--AVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVA 280
Query: 660 LLCIQDEPNLRPSMKNVILMLE 681
             C+ ++ N RP +K V  +L+
Sbjct: 281 SQCLHEKKNKRPDIKKVQQLLQ 302

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 106/202 (52%), Gaps = 12/202 (5%)
Query: 486 LVYEFMSKGSLADLLFNLE-TRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           LVY +M  GSL D L  L+ T PL W  R +IA   A G+ +LH   E   IH DIK  N
Sbjct: 101 LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSAN 157
Query: 544 ILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           IL+D+++ AKISDFGLA+      Q  +   + G+  YMAPE    G IT KSD+YSFGV
Sbjct: 158 ILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGV 216
Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE---EVDKITLERMVKTG 659
           VLLEII       V+     ++LL                +++   + D  ++E M    
Sbjct: 217 VLLEIITGLP--AVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVA 274
Query: 660 LLCIQDEPNLRPSMKNVILMLE 681
             C+ ++ N RP +K V  +L+
Sbjct: 275 SQCLHEKKNKRPDIKKVQQLLQ 296

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 103/202 (50%), Gaps = 12/202 (5%)
Query: 486 LVYEFMSKGSLADLLFNLE-TRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           LVY +   GSL D L  L+ T PL W  R +IA   A G+ +LH   E   IH DIK  N
Sbjct: 98  LVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLH---ENHHIHRDIKSAN 154
Query: 544 ILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           IL+D+++ AKISDFGLA+      Q    + + G+  Y APE    G IT KSD+YSFGV
Sbjct: 155 ILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGV 213
Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE---EVDKITLERMVKTG 659
           VLLEII       V+     ++LL                +++   + D  ++E      
Sbjct: 214 VLLEIITGLP--AVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVA 271
Query: 660 LLCIQDEPNLRPSMKNVILMLE 681
             C+ ++ N RP +K V  +L+
Sbjct: 272 SQCLHEKKNKRPDIKKVQQLLQ 293

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 460 GSITFLCFLIAISSLLVYKHRSSKKL----------LVYEFMSKGSLADLLFNLE--TRP 507
           GS++   FL   + +   +H    KL          ++ EFM+KGSL D L + E   +P
Sbjct: 223 GSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 282
Query: 508 LWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ 567
           L +  +  +  +A G+ ++    +   IH D++  NIL+  S   KI+DFGLA+++  N+
Sbjct: 283 LPK-LIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338
Query: 568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC 609
                G +    + APE  N G  T+KSDV+SFG++L+EI+ 
Sbjct: 339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 16/162 (9%)
Query: 460 GSITFLCFLIAISSLLVYKHRSSKKL----------LVYEFMSKGSLADLLFNLE--TRP 507
           GS++   FL   + +   +H    KL          ++ EFM+KGSL D L + E   +P
Sbjct: 50  GSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 109
Query: 508 LWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ 567
           L +  +  +  +A G+ ++        IH D++  NIL+  S   KI+DFGLA+++  N+
Sbjct: 110 LPK-LIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 165
Query: 568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC 609
                G +    + APE  N G  T+KSDV+SFG++L+EI+ 
Sbjct: 166 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+M+KGSL D L + E R L   + V +A  VA G+ Y+     +  IH D++  NI
Sbjct: 80  IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANI 136
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ +    KI+DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++L
Sbjct: 137 LVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 196
Query: 605 LEII 608
            E++
Sbjct: 197 TELV 200

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 74/130 (56%), Gaps = 4/130 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCD 538
           R     ++ E+M+KGSL D L + E  + L    +  +  +A G+ Y+  +     IH D
Sbjct: 79  REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRD 135
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           ++  N+L+ +S   KI+DFGLA+++  N+     G +    + APE  N G  T+KSDV+
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVW 195
Query: 599 SFGVVLLEII 608
           SFG++L EI+
Sbjct: 196 SFGILLYEIV 205

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 460 GSITFLCFLIAISSLLVYKHRSSKKL----------LVYEFMSKGSLADLLFNLETRPLW 509
           GS++   FL   + +   +H+   +L          ++ E+M  GSL D L       L 
Sbjct: 56  GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLT 115
Query: 510 RDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT 568
            +++  +A  +A G+ ++    E   IH D++  NIL+ D+   KI+DFGLA+L+  N+ 
Sbjct: 116 INKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX 172
Query: 569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC 609
               G +    + APE  N G  T+KSDV+SFG++L EI+ 
Sbjct: 173 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 460 GSITFLCFLIAISSLLVYKHRSSKKL----------LVYEFMSKGSLADLLFNLETRPLW 509
           GS++   FL   + +   +H+   +L          ++ E+M  GSL D L       L 
Sbjct: 54  GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLT 113
Query: 510 RDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT 568
            +++  +A  +A G+ ++    E   IH D++  NIL+ D+   KI+DFGLA+L+  N+ 
Sbjct: 114 INKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX 170
Query: 569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC 609
               G +    + APE  N G  T+KSDV+SFG++L EI+ 
Sbjct: 171 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ E+M  GSL D L       L  +++  +A  +A G+ ++    E   IH D++  NI
Sbjct: 93  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANI 149
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ D+   KI+DFGLA+L+  N+     G +    + APE  N G  T+KSDV+SFG++L
Sbjct: 150 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 209
Query: 605 LEIIC 609
            EI+ 
Sbjct: 210 TEIVT 214

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ E+M  GSL D L       L  +++  +A  +A G+ ++    E   IH D++  NI
Sbjct: 84  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANI 140
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ D+   KI+DFGLA+L+  N+     G +    + APE  N G  T+KSDV+SFG++L
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 605 LEIIC 609
            EI+ 
Sbjct: 201 TEIVT 205

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 486 LVYEFMSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ EFM+KGSL D L + E  + L    +  +  +A G+ Y+  +     IH D++  N+
Sbjct: 84  IITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANV 140
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ +S   KI+DFGLA+++  N+     G +    + APE  N G  T+KS+V+SFG++L
Sbjct: 141 LVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILL 200
Query: 605 LEII 608
            EI+
Sbjct: 201 YEIV 204

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ E+M  GSL D L       L  +++  +A  +A G+ ++    E   IH D++  NI
Sbjct: 84  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANI 140
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ D+   KI+DFGLA+L+  N+     G +    + APE  N G  T+KSDV+SFG++L
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 605 LEIIC 609
            EI+ 
Sbjct: 201 TEIVT 205

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ E+M  GSL D L       L  +++  +A  +A G+ ++    E   IH D++  NI
Sbjct: 85  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANI 141
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ D+   KI+DFGLA+L+  N+     G +    + APE  N G  T+KSDV+SFG++L
Sbjct: 142 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 201
Query: 605 LEIIC 609
            EI+ 
Sbjct: 202 TEIVT 206

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ E+M  GSL D L       L  +++  +A  +A G+ ++    E   IH D++  NI
Sbjct: 94  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANI 150
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ D+   KI+DFGLA+L+  N+     G +    + APE  N G  T+KSDV+SFG++L
Sbjct: 151 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 210
Query: 605 LEIIC 609
            EI+ 
Sbjct: 211 TEIVT 215

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ E+M  GSL D L       L  +++  +A  +A G+ ++    E   IH D++  NI
Sbjct: 86  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANI 142
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ D+   KI+DFGLA+L+  N+     G +    + APE  N G  T+KSDV+SFG++L
Sbjct: 143 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 202
Query: 605 LEIIC 609
            EI+ 
Sbjct: 203 TEIVT 207

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ E+M  GSL D L       L  +++  +A  +A G+ ++    E   IH D++  NI
Sbjct: 89  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANI 145
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ D+   KI+DFGLA+L+  N+     G +    + APE  N G  T+KSDV+SFG++L
Sbjct: 146 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 205
Query: 605 LEIIC 609
            EI+ 
Sbjct: 206 TEIVT 210

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ E+M  GSL D L       L  +++  +A  +A G+ ++    E   IH D++  NI
Sbjct: 90  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANI 146
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ D+   KI+DFGLA+L+  N+     G +    + APE  N G  T+KSDV+SFG++L
Sbjct: 147 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 206
Query: 605 LEIIC 609
            EI+ 
Sbjct: 207 TEIVT 211

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ E+M  GSL D L       L  +++  +A  +A G+ ++    E   IH D++  NI
Sbjct: 79  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANI 135
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ D+   KI+DFGLA+L+  N+     G +    + APE  N G  T+KSDV+SFG++L
Sbjct: 136 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 195
Query: 605 LEIIC 609
            EI+ 
Sbjct: 196 TEIVT 200

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ E+M  GSL D L       L  +++  +A  +A G+ ++    E   IH D++  NI
Sbjct: 84  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANI 140
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ D+   KI+DFGLA+L+  N+     G +    + APE  N G  T+KSDV+SFG++L
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 605 LEIIC 609
            EI+ 
Sbjct: 201 TEIVT 205

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ E+M  GSL D L       L  +++  +A  +A G+ ++    E   IH +++  NI
Sbjct: 80  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNLRAANI 136
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ D+   KI+DFGLA+L+  N+     G +    + APE  N G  T+KSDV+SFG++L
Sbjct: 137 LVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 196
Query: 605 LEIIC 609
            EI+ 
Sbjct: 197 TEIVT 201

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWR--DRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           +V E+MSKGSL D L   ET    R    V +A  +A G+ Y+     +  +H D++  N
Sbjct: 338 IVTEYMSKGSLLDFLKG-ETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAAN 393
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++
Sbjct: 394 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 453
Query: 604 LLEI 607
           L E+
Sbjct: 454 LTEL 457

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWR--DRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           +V E+MSKGSL D L   ET    R    V +A  +A G+ Y+     +  +H D++  N
Sbjct: 255 IVTEYMSKGSLLDFLKG-ETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAAN 310
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 370
Query: 604 LLEI 607
           L E+
Sbjct: 371 LTEL 374

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWR--DRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           +V E+MSKGSL D L   ET    R    V +A  +A G+ Y+     +  +H D++  N
Sbjct: 255 IVTEYMSKGSLLDFLKG-ETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAAN 310
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 370
Query: 604 LLEI 607
           L E+
Sbjct: 371 LTEL 374

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ E+M  GSL D L       L  +++  +A  +A G+ ++    E   IH D++  NI
Sbjct: 84  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANI 140
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ D+   KI+DFGLA+L+   +     G +    + APE  N G  T+KSDV+SFG++L
Sbjct: 141 LVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 605 LEIIC 609
            EI+ 
Sbjct: 201 TEIVT 205

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRI--ALDVARGLLYLHDECEVQIIHCDIKLRN 543
           +V E++S+GSL  LL     R    +R R+  A DVA+G+ YLH+     I+H D+K  N
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPN 169
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           +L+D  +  K+ DFGL++L   +         G+  +MAPE         KSDVYSFGV+
Sbjct: 170 LLVDKKYTVKVCDFGLSRLKA-SXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVI 228
Query: 604 LLEI 607
           L E+
Sbjct: 229 LWEL 232

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWR--DRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           +V E+MSKGSL D L   ET    R    V +A  +A G+ Y+     +  +H D++  N
Sbjct: 255 IVGEYMSKGSLLDFLKG-ETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAAN 310
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 370
Query: 604 LLEI 607
           L E+
Sbjct: 371 LTEL 374

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWR--DRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           +V E+MSKGSL D L   ET    R    V +A  +A G+ Y+     +  +H D++  N
Sbjct: 79  IVTEYMSKGSLLDFLKG-ETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAAN 134
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++
Sbjct: 135 ILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 194
Query: 604 LLEI 607
           L E+
Sbjct: 195 LTEL 198

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWR--DRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           +V E+MSKGSL D L   ET    R    V +A  +A G+ Y+     +  +H D++  N
Sbjct: 82  IVTEYMSKGSLLDFLKG-ETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAAN 137
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++
Sbjct: 138 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 197
Query: 604 LLEI 607
           L E+
Sbjct: 198 LTEL 201

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRI--ALDVARGLLYLHDECEVQIIHCDIKLRN 543
           +V E++S+GSL  LL     R    +R R+  A DVA+G+ YLH+     I+H ++K  N
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPN 169
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           +L+D  +  K+ DFGL++L         +   G+  +MAPE         KSDVYSFGV+
Sbjct: 170 LLVDKKYTVKVCDFGLSRLKASTFLSSKSAA-GTPEWMAPEVLRDEPSNEKSDVYSFGVI 228
Query: 604 LLEI 607
           L E+
Sbjct: 229 LWEL 232

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+MSKGSL D L     + L   + V +A  +A G+ Y+     +  +H D++  NI
Sbjct: 89  IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANI 145
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++L
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 605 LEI 607
            E+
Sbjct: 206 TEL 208

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+MSKGSL D L     + L   + V +A  +A G+ Y+     +  +H D++  NI
Sbjct: 89  IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANI 145
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++L
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 605 LEI 607
            E+
Sbjct: 206 TEL 208

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+MSKGSL D L     + L   + V +A  +A G+ Y+     +  +H D++  NI
Sbjct: 89  IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANI 145
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++L
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 605 LEI 607
            E+
Sbjct: 206 TEL 208

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+MSKGSL D L     + L   + V +A  +A G+ Y+     +  +H D++  NI
Sbjct: 89  IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANI 145
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++L
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 605 LEI 607
            E+
Sbjct: 206 TEL 208

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+MSKGSL D L     + L   + V +A  +A G+ Y+     +  +H D++  NI
Sbjct: 78  IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANI 134
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++L
Sbjct: 135 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 194
Query: 605 LEI 607
            E+
Sbjct: 195 TEL 197

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+MSKGSL D L     + L   + V +A  +A G+ Y+     +  +H D++  NI
Sbjct: 80  IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANI 136
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++L
Sbjct: 137 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 196
Query: 605 LEI 607
            E+
Sbjct: 197 TEL 199

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 26/162 (16%)
Query: 460 GSITFLCFLIAISSLLVYKHRSSKKL----------LVYEFMSKGSLADLLFNLE--TRP 507
           GS++   FL   + +   +H    KL          ++ EFM+KGSL D L + E   +P
Sbjct: 217 GSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQP 276
Query: 508 LWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ 567
           L +  +  +  +A G+ ++    +   IH D++  NIL+  S   KI+DFGLA++     
Sbjct: 277 LPK-LIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARV----- 327
Query: 568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC 609
                G +    + APE  N G  T+KSDV+SFG++L+EI+ 
Sbjct: 328 -----GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+MSKGSL D L     + L   + V +A  +A G+ Y+     +  +H D++  NI
Sbjct: 89  IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANI 145
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++L
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 605 LEI 607
            E+
Sbjct: 206 TEL 208

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+MSKGSL D L     + L   + V +A  +A G+ Y+     +  +H D++  NI
Sbjct: 256 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANI 312
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ ++   K++DFGL +L+  N+     G +    + APE    G  T+KSDV+SFG++L
Sbjct: 313 LVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 372
Query: 605 LEI 607
            E+
Sbjct: 373 TEL 375

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 18/137 (13%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
            + E++  G+L  ++ +++++  W  RV  A D+A G+ YLH    + IIH D+   N L
Sbjct: 84  FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCL 140
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVR--------------GSRGYMAPEWQNSGLI 591
           + ++    ++DFGLA+L++  +T    G+R              G+  +MAPE  N    
Sbjct: 141 VRENKNVVVADFGLARLMVDEKTQ-PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSY 199
Query: 592 TVKSDVYSFGVVLLEII 608
             K DV+SFG+VL EII
Sbjct: 200 DEKVDVFSFGIVLCEII 216

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 16/160 (10%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV+EFM  G L+D L            + + LDV  G+ YL + C   +IH D+  RN L
Sbjct: 99  LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCL 155
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
           + ++   K+SDFG+ + ++ +Q     G +    + +PE  +    + KSDV+SFGV++ 
Sbjct: 156 VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 215
Query: 606 EIIC-------CRSNFEV--NVSTADEV----LLSTWVYN 632
           E+          RSN EV  ++ST   +    L ST VY 
Sbjct: 216 EVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ 255

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 16/160 (10%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV+EFM  G L+D L            + + LDV  G+ YL + C   +IH D+  RN L
Sbjct: 79  LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCL 135
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
           + ++   K+SDFG+ + ++ +Q     G +    + +PE  +    + KSDV+SFGV++ 
Sbjct: 136 VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 195
Query: 606 EIIC-------CRSNFEV--NVSTADEV----LLSTWVYN 632
           E+          RSN EV  ++ST   +    L ST VY 
Sbjct: 196 EVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ 235

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 16/160 (10%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV+EFM  G L+D L            + + LDV  G+ YL + C   +IH D+  RN L
Sbjct: 77  LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCL 133
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
           + ++   K+SDFG+ + ++ +Q     G +    + +PE  +    + KSDV+SFGV++ 
Sbjct: 134 VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 193
Query: 606 EIIC-------CRSNFEV--NVSTADEV----LLSTWVYN 632
           E+          RSN EV  ++ST   +    L ST VY 
Sbjct: 194 EVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ 233

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 16/160 (10%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV+EFM  G L+D L            + + LDV  G+ YL + C   +IH D+  RN L
Sbjct: 82  LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCL 138
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
           + ++   K+SDFG+ + ++ +Q     G +    + +PE  +    + KSDV+SFGV++ 
Sbjct: 139 VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 198
Query: 606 EIIC-------CRSNFEV--NVSTADEV----LLSTWVYN 632
           E+          RSN EV  ++ST   +    L ST VY 
Sbjct: 199 EVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ 238

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+MSKGSL D L     + L   + V +A  +A G+ Y+     +  +H D+   NI
Sbjct: 89  IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLAAANI 145
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++L
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 605 LEI 607
            E+
Sbjct: 206 TEL 208

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ YL  +   + +H D+  RN 
Sbjct: 107 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNC 163
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 164 MLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 223
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 224 VLLWELMTRGAPPYPDVNTFD 244

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWR--DRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           +V E+M+KGSL D L   ET    R    V ++  +A G+ Y+     +  +H D++  N
Sbjct: 86  IVTEYMNKGSLLDFLKG-ETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAAN 141
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++
Sbjct: 142 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 201
Query: 604 LLEI 607
           L E+
Sbjct: 202 LTEL 205

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+MSKG L D L     + L   + V +A  +A G+ Y+     +  +H D++  NI
Sbjct: 89  IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANI 145
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++L
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 605 LEI 607
            E+
Sbjct: 206 TEL 208

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+MSKG L D L     + L   + V +A  +A G+ Y+     +  +H D++  NI
Sbjct: 89  IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANI 145
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++L
Sbjct: 146 LVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 205
Query: 605 LEI 607
            E+
Sbjct: 206 TEL 208

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWR--DRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           +V E+M+KGSL D L   ET    R    V ++  +A G+ Y+     +  +H D++  N
Sbjct: 86  IVTEYMNKGSLLDFLKG-ETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAAN 141
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++
Sbjct: 142 ILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 201
Query: 604 LLEI 607
           L E+
Sbjct: 202 LTEL 205

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ +L  +   + +H D+  RN 
Sbjct: 109 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNC 165
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ ++  +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 166 MLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 225
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 226 VLLWELMTRGAPPYPDVNTFD 246

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ YL  +   + +H D+  RN 
Sbjct: 106 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNC 162
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 163 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 222
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 223 VLLWELMTRGAPPYPDVNTFD 243

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ YL  +   + +H D+  RN 
Sbjct: 107 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNC 163
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 164 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 223
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 224 VLLWELMTRGAPPYPDVNTFD 244

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ YL  +   + +H D+  RN 
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNC 164
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 165 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 224
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 225 VLLWELMTRGAPPYPDVNTFD 245

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ YL  +   + +H D+  RN 
Sbjct: 100 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNC 156
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 157 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 216
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 217 VLLWELMTRGAPPYPDVNTFD 237

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ YL  +   + +H D+  RN 
Sbjct: 103 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNC 159
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 160 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 219
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 220 VLLWELMTRGAPPYPDVNTFD 240

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ YL  +   + +H D+  RN 
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNC 164
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 165 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 224
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 225 VLLWELMTRGAPPYPDVNTFD 245

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ YL  +   + +H D+  RN 
Sbjct: 126 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNC 182
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 183 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 242
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 243 VLLWELMTRGAPPYPDVNTFD 263

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ YL  +   + +H D+  RN 
Sbjct: 127 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNC 183
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 184 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 243
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 244 VLLWELMTRGAPPYPDVNTFD 264

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ YL  +   + +H D+  RN 
Sbjct: 105 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNC 161
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 162 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 221
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 222 VLLWELMTRGAPPYPDVNTFD 242

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV+EFM  G L+D L            + + LDV  G+ YL    E  +IH D+  RN L
Sbjct: 79  LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCL 135
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
           + ++   K+SDFG+ + ++ +Q     G +    + +PE  +    + KSDV+SFGV++ 
Sbjct: 136 VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 195
Query: 606 EIIC-------CRSNFEV--NVSTADEV----LLSTWVYN 632
           E+          RSN EV  ++ST   +    L ST VY 
Sbjct: 196 EVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ 235

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV EFM  G L+D L            + + LDV  G+ YL + C   +IH D+  RN L
Sbjct: 80  LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCL 136
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
           + ++   K+SDFG+ + ++ +Q     G +    + +PE  +    + KSDV+SFGV++ 
Sbjct: 137 VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 196
Query: 606 EIIC-------CRSNFEV--NVSTADEV----LLSTWVYN 632
           E+          RSN EV  ++ST   +    L ST VY 
Sbjct: 197 EVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ 236

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ +L  +   + +H D+  RN 
Sbjct: 167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNC 223
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 224 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 283
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 284 VLLWELMTRGAPPYPDVNTFD 304

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ +L  +   + +H D+  RN 
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNC 164
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 165 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 224
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 225 VLLWELMTRGAPPYPDVNTFD 245

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ +L  +   + +H D+  RN 
Sbjct: 113 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNC 169
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 170 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 229
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 230 VLLWELMTRGAPPYPDVNTFD 250

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ +L  +   + +H D+  RN 
Sbjct: 106 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNC 162
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 163 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 222
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 223 VLLWELMTRGAPPYPDVNTFD 243

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ +L  +   + +H D+  RN 
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNC 164
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 165 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 224
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 225 VLLWELMTRGAPPYPDVNTFD 245

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ +L  +   + +H D+  RN 
Sbjct: 109 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNC 165
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 166 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 225
Query: 602 VVLLEIICCRSNFEVNVSTAD 622
           V+L E++   +    +V+T D
Sbjct: 226 VLLWELMTRGAPPYPDVNTFD 246

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 26/161 (16%)
Query: 485 LLVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLLYLHDECEVQIIHCDIKLR 542
             V EF++ G   DL+F+++ +R     R R  A ++   L++LHD+    II+ D+KL 
Sbjct: 100 FFVMEFVNGG---DLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLD 153
Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLITVKSDV 597
           N+L+D     K++DFG+ K       GI  GV      G+  Y+APE     L     D 
Sbjct: 154 NVLLDHEGHCKLADFGMCK------EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDW 207
Query: 598 YSFGVVLLEIICCRSNFEVNVSTA-------DEVLLSTWVY 631
           ++ GV+L E++C  + FE             DEV+  TW++
Sbjct: 208 WAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLH 248

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 19/235 (8%)
Query: 451 LLTVLAGCL--GSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPL 508
           ++ +L  C   G +  +        LL +  R ++ +L    ++ G   + L   + RPL
Sbjct: 97  IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPS-LAPGQDPEGLDKEDGRPL 155
Query: 509 -WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ 567
             RD +  +  VA+G+ +L  +     IH D+  RN+L+ +   AKI DFGLA+ +M + 
Sbjct: 156 ELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 212
Query: 568 TGIVAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL 626
             IV G  R    +MAPE     + TV+SDV+S+G++L EI      F + ++    +L+
Sbjct: 213 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPYPGILV 266
Query: 627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
           ++  Y     G   ++ +       +  +++    C   EP  RP+ + +   L+
Sbjct: 267 NSKFYKLVKDG--YQMAQPAFAPKNIYSIMQA---CWALEPTHRPTFQQICSFLQ 316

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS 549
           +M  G L   + + +  P  +D +   L VARG+ YL    E + +H D+  RN ++D+S
Sbjct: 104 YMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDES 160
Query: 550 WRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFGVVLLE 606
           +  K++DFGLA+ ++  +   V   R +R    + A E   +   T KSDV+SFGV+L E
Sbjct: 161 FTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWE 220
Query: 607 II 608
           ++
Sbjct: 221 LL 222

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 38/250 (15%)
Query: 464 FLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVR 514
           F C  +    LL    +    L+V E M+ G L   L +L            P  ++ ++
Sbjct: 77  FTCHHVV--RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 515 IALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGV 574
           +A ++A G+ YL+ +   + +H D+  RN ++   +  KI DFG+ + +           
Sbjct: 135 MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX----R 187
Query: 575 RGSRG-----YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW 629
           +G +G     +MAPE    G+ T  SD++SFGVVL EI          +S  +E +L   
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS--NEQVLKFV 245
Query: 630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPIL 689
           +   ++    N            ER+     +C Q  PN+RP+   ++ +L+  +     
Sbjct: 246 MDGGYLDQPDN----------CPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHP--- 292
Query: 690 AFPPLSHVNS 699
           +FP +S  +S
Sbjct: 293 SFPEVSFFHS 302

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 17/194 (8%)
Query: 490 FMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD 548
           F+ + + ADL    + RPL  RD +  +  VA+G+ +L  +     IH D+  RN+L+ +
Sbjct: 132 FLRRKAEADL-DKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTN 187
Query: 549 SWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
              AKI DFGLA+ +M +   IV G  R    +MAPE     + TV+SDV+S+G++L EI
Sbjct: 188 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
Query: 608 ICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEP 667
                 F + ++    +L+++  Y     G   ++ +       +  +++    C   EP
Sbjct: 248 ------FSLGLNPYPGILVNSKFYKLVKDG--YQMAQPAFAPKNIYSIMQA---CWALEP 296
Query: 668 NLRPSMKNVILMLE 681
             RP+ + +   L+
Sbjct: 297 THRPTFQQICSFLQ 310

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 17/194 (8%)
Query: 490 FMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD 548
           F+ + + ADL    + RPL  RD +  +  VA+G+ +L  +     IH D+  RN+L+ +
Sbjct: 140 FLRRKAEADLD-KEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTN 195
Query: 549 SWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
              AKI DFGLA+ +M +   IV G  R    +MAPE     + TV+SDV+S+G++L EI
Sbjct: 196 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
Query: 608 ICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEP 667
                 F + ++    +L+++  Y     G   ++ +       +  +++    C   EP
Sbjct: 256 ------FSLGLNPYPGILVNSKFYKLVKDG--YQMAQPAFAPKNIYSIMQA---CWALEP 304
Query: 668 NLRPSMKNVILMLE 681
             RP+ + +   L+
Sbjct: 305 THRPTFQQICSFLQ 318

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 485 LLVYEFMSKGSLADLLFN----LETRPLW---------RDRVRIALDVARGLLYLHDECE 531
           L++ E+   G L + L      LET P +         RD +  +  VA+G+ +L  +  
Sbjct: 126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK-- 183
Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEWQNSGL 590
              IH D+  RN+L+ +   AKI DFGLA+ +M +   IV G  R    +MAPE     +
Sbjct: 184 -NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 242
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI 650
            TV+SDV+S+G++L EI      F + ++    +L+++  Y     G   ++ +      
Sbjct: 243 YTVQSDVWSYGILLWEI------FSLGLNPYPGILVNSKFYKLVKDG--YQMAQPAFAPK 294
Query: 651 TLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
            +  +++    C   EP  RP+ + +   L+
Sbjct: 295 NIYSIMQA---CWALEPTHRPTFQQICSFLQ 322

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 485 LLVYEFMSKGSLADLLFN----LETRPLW---------RDRVRIALDVARGLLYLHDECE 531
           L++ E+   G L + L      LET P +         RD +  +  VA+G+ +L  +  
Sbjct: 126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK-- 183
Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEWQNSGL 590
              IH D+  RN+L+ +   AKI DFGLA+ +M +   IV G  R    +MAPE     +
Sbjct: 184 -NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 242
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI 650
            TV+SDV+S+G++L EI      F + ++    +L+++  Y     G   ++ +      
Sbjct: 243 YTVQSDVWSYGILLWEI------FSLGLNPYPGILVNSKFYKLVKDG--YQMAQPAFAPK 294
Query: 651 TLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
            +  +++    C   EP  RP+ + +   L+
Sbjct: 295 NIYSIMQA---CWALEPTHRPTFQQICSFLQ 322

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 19/132 (14%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECE-------VQIIHCD 538
           LV E++  G L D L           R R  LD +R LLY    C+        + +H D
Sbjct: 90  LVMEYLPSGCLRDFL----------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 139
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSD 596
           +  RNIL++     KI+DFGLAKLL  ++   V    G     + APE  +  + + +SD
Sbjct: 140 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 199
Query: 597 VYSFGVVLLEII 608
           V+SFGVVL E+ 
Sbjct: 200 VWSFGVVLYELF 211

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 19/132 (14%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECE-------VQIIHCD 538
           LV E++  G L D L           R R  LD +R LLY    C+        + +H D
Sbjct: 87  LVMEYLPSGCLRDFL----------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 136
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSD 596
           +  RNIL++     KI+DFGLAKLL  ++   V    G     + APE  +  + + +SD
Sbjct: 137 LAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSD 196
Query: 597 VYSFGVVLLEII 608
           V+SFGVVL E+ 
Sbjct: 197 VWSFGVVLYELF 208

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 19/132 (14%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECE-------VQIIHCD 538
           LV E++  G L D L           R R  LD +R LLY    C+        + +H D
Sbjct: 91  LVMEYLPSGCLRDFL----------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 140
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSD 596
           +  RNIL++     KI+DFGLAKLL  ++   V    G     + APE  +  + + +SD
Sbjct: 141 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 200
Query: 597 VYSFGVVLLEII 608
           V+SFGVVL E+ 
Sbjct: 201 VWSFGVVLYELF 212

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 19/132 (14%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECE-------VQIIHCD 538
           LV E++  G L D L           R R  LD +R LLY    C+        + +H D
Sbjct: 103 LVMEYLPSGCLRDFL----------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 152
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSD 596
           +  RNIL++     KI+DFGLAKLL  ++   V    G     + APE  +  + + +SD
Sbjct: 153 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 212
Query: 597 VYSFGVVLLEII 608
           V+SFGVVL E+ 
Sbjct: 213 VWSFGVVLYELF 224

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 21/138 (15%)
Query: 486 LVYEFMSKGSLADLL-FNLETRPLWRDRVRIALDVARGLLYLHDEC-------EVQIIHC 537
           L+  F  KGSL+D L  N+ +   W +   IA  +ARGL YLH++        +  I H 
Sbjct: 99  LITAFHEKGSLSDFLKANVVS---WNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHR 155
Query: 538 DIKLRNILIDDSWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPE-------WQNSG 589
           DIK +N+L+ ++  A I+DFGLA K       G   G  G+R YMAPE       +Q   
Sbjct: 156 DIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDA 215
Query: 590 LITVKSDVYSFGVVLLEI 607
            + +  D+Y+ G+VL E+
Sbjct: 216 FLRI--DMYAMGLVLWEL 231

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 94/200 (47%), Gaps = 25/200 (12%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV EF   G L  +L      P     V  A+ +ARG+ YLHDE  V IIH D+K  NIL
Sbjct: 83  LVMEFARGGPLNRVLSGKRIPP--DILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNIL 140
Query: 546 I-------DDSWRA-KISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
           I       D S +  KI+DFGLA+      T + A   G+  +MAPE   + + +  SDV
Sbjct: 141 ILQKVENGDLSNKILKITDFGLAREWH-RTTKMSAA--GAYAWMAPEVIRASMFSKGSDV 197
Query: 598 YSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVK 657
           +S+GV+L E++      EV     D + ++  V         NKL    +     E   K
Sbjct: 198 WSYGVLLWELLTG----EVPFRGIDGLAVAYGV-------AMNKLA-LPIPSTCPEPFAK 245
Query: 658 TGLLCIQDEPNLRPSMKNVI 677
               C   +P+ RPS  N++
Sbjct: 246 LMEDCWNPDPHSRPSFTNIL 265

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 36/243 (14%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVAR 521
           +  LL    +    L+V E M+ G L   L +L            P  ++ +++A ++A 
Sbjct: 82  VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-- 579
           G+ YL+ +   + +H D+  RN ++   +  KI DFG+ + +           +G +G  
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX----RKGGKGLL 194
Query: 580 ---YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVA 636
              +MAPE    G+ T  SD++SFGVVL EI          +S  +E +L   +   ++ 
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS--NEQVLKFVMDGGYLD 252
Query: 637 GEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPPLSH 696
              N            ER+     +C Q  P +RP+   ++ +L+  +     +FP +S 
Sbjct: 253 QPDN----------CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP---SFPEVSF 299
Query: 697 VNS 699
            +S
Sbjct: 300 FHS 302

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V ++    SL   L   ET+   +  + IA   ARG+ YLH +    IIH D+K  NI 
Sbjct: 84  IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIF 140
Query: 546 IDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           + +    KI DFGLA +    + +     + GS  +MAPE    Q+S   + +SDVY+FG
Sbjct: 141 LHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 200
Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
           +VL E++  +  +  N++  D+++    V    ++ + +K     V     +RM +    
Sbjct: 201 IVLYELMTGQLPYS-NINNRDQII--EMVGRGSLSPDLSK-----VRSNCPKRMKRLMAE 252
Query: 662 CIQDEPNLRPSMKNVILMLE 681
           C++ + + RPS   ++  +E
Sbjct: 253 CLKKKRDERPSFPRILAEIE 272

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 38/250 (15%)
Query: 464 FLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVR 514
           F C  +    LL    +    L+V E M+ G L   L +L            P  ++ ++
Sbjct: 74  FTCHHVV--RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 131
Query: 515 IALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGV 574
           +A ++A G+ YL+ +   + +H D+  RN ++   +  KI DFG+ + +           
Sbjct: 132 MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX----R 184
Query: 575 RGSRG-----YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW 629
           +G +G     +MAPE    G+ T  SD++SFGVVL EI          +S  +E +L   
Sbjct: 185 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS--NEQVLKFV 242
Query: 630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPIL 689
           +   ++    N            ER+     +C Q  P +RP+   ++ +L+  +     
Sbjct: 243 MDGGYLDQPDN----------CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP--- 289
Query: 690 AFPPLSHVNS 699
           +FP +S  +S
Sbjct: 290 SFPEVSFFHS 299

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 15/173 (8%)
Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG 569
           RD +  +  VA+G+ +L  +     IH D+  RN+L+ +   AKI DFGLA+ +M +   
Sbjct: 166 RDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 570 IVAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST 628
           IV G  R    +MAPE     + TV+SDV+S+G++L EI      F + ++    +L+++
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI------FSLGLNPYPGILVNS 276
Query: 629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
             Y     G   ++ +       +  +++    C   EP  RP+ + +   L+
Sbjct: 277 KFYKLVKDG--YQMAQPAFAPKNIYSIMQA---CWALEPTHRPTFQQICSFLQ 324

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 36/243 (14%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVAR 521
           +  LL    +    L+V E M+ G L   L +L            P  ++ +++A ++A 
Sbjct: 82  VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-- 579
           G+ YL+ +   + +H D+  RN ++   +  KI DFG+ + +   +T      +G +G  
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETAYYR--KGGKGLL 194
Query: 580 ---YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVA 636
              +MAPE    G+ T  SD++SFGVVL EI          +S  +E +L   +   ++ 
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS--NEQVLKFVMDGGYLD 252
Query: 637 GEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPPLSH 696
              N            ER+     +C Q  P +RP+   ++ +L+  +     +FP +S 
Sbjct: 253 QPDN----------CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP---SFPEVSF 299
Query: 697 VNS 699
            +S
Sbjct: 300 FHS 302

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 38/250 (15%)
Query: 464 FLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVR 514
           F C  +    LL    +    L+V E M+ G L   L +L            P  ++ ++
Sbjct: 78  FTCHHVV--RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 135
Query: 515 IALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGV 574
           +A ++A G+ YL+ +   + +H ++  RN ++   +  KI DFG+ + +   +T      
Sbjct: 136 MAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYR-- 188
Query: 575 RGSRG-----YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW 629
           +G +G     +MAPE    G+ T  SD++SFGVVL EI          +S  +E +L   
Sbjct: 189 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS--NEQVLKFV 246
Query: 630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPIL 689
           +   ++    N            ER+     +C Q  PN+RP+   ++ +L+  +     
Sbjct: 247 MDGGYLDQPDN----------CPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHP--- 293
Query: 690 AFPPLSHVNS 699
           +FP +S  +S
Sbjct: 294 SFPEVSFFHS 303

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 38/250 (15%)
Query: 464 FLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVR 514
           F C  +    LL    +    L+V E M+ G L   L +L            P  ++ ++
Sbjct: 77  FTCHHVV--RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 515 IALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGV 574
           +A ++A G+ YL+ +   + +H ++  RN ++   +  KI DFG+ + +   +T      
Sbjct: 135 MAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYR-- 187
Query: 575 RGSRG-----YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW 629
           +G +G     +MAPE    G+ T  SD++SFGVVL EI          +S  +E +L   
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS--NEQVLKFV 245
Query: 630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPIL 689
           +   ++    N            ER+     +C Q  PN+RP+   ++ +L+  +     
Sbjct: 246 MDGGYLDQPDN----------CPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHP--- 292
Query: 690 AFPPLSHVNS 699
           +FP +S  +S
Sbjct: 293 SFPEVSFFHS 302

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 111/250 (44%), Gaps = 38/250 (15%)
Query: 464 FLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVR 514
           F C  +    LL    +    L+V E M+ G L   L +L            P  ++ ++
Sbjct: 76  FTCHHVV--RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 133
Query: 515 IALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGV 574
           +A ++A G+ YL+ +   + +H D+  RN ++   +  KI DFG+ + +   +T      
Sbjct: 134 MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYR-- 186
Query: 575 RGSRG-----YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW 629
           +G +G     +MAPE    G+ T  SD++SFGVVL EI          +S  +E +L   
Sbjct: 187 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS--NEQVLKFV 244
Query: 630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPIL 689
           +   ++    N            ER+     +C Q  P +RP+   ++ +L+  +     
Sbjct: 245 MDGGYLDQPDN----------CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP--- 291
Query: 690 AFPPLSHVNS 699
           +FP +S  +S
Sbjct: 292 SFPEVSFFHS 301

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 24/179 (13%)
Query: 511 DRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI 570
           D +  A  +++G+ YL    E++++H D+  RNIL+ +  + KISDFGL++ +    +  
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS-- 205
Query: 571 VAGVRGSRGYMAPEWQN-----SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL 625
              V+ S+G +  +W         + T +SDV+SFGV+L EI+    N    +       
Sbjct: 206 --XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--- 260
Query: 626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM 684
               ++N    G       E  D  + E M +  L C + EP+ RP   ++   LE  M
Sbjct: 261 ----LFNLLKTGHRM----ERPDNCS-EEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 85/173 (49%), Gaps = 35/173 (20%)
Query: 460 GSITFLCFLIA----ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFN---LETRPLW--- 509
           G +  LC L      I+ L   +HR    L + E+   G+L D L     LET P +   
Sbjct: 74  GELEVLCKLGHHPNIINLLGACEHRGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIA 132
Query: 510 ---------RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA 560
                    +  +  A DVARG+ YL    + Q IH D+  RNIL+ +++ AKI+DFGL+
Sbjct: 133 NSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLS 189
Query: 561 KLLMPNQTGIVAGVRGSRG-----YMAPEWQNSGLITVKSDVYSFGVVLLEII 608
           +       G    V+ + G     +MA E  N  + T  SDV+S+GV+L EI+
Sbjct: 190 R-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 85/173 (49%), Gaps = 35/173 (20%)
Query: 460 GSITFLCFLIA----ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFN---LETRPLW--- 509
           G +  LC L      I+ L   +HR    L + E+   G+L D L     LET P +   
Sbjct: 64  GELEVLCKLGHHPNIINLLGACEHRGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIA 122
Query: 510 ---------RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA 560
                    +  +  A DVARG+ YL    + Q IH D+  RNIL+ +++ AKI+DFGL+
Sbjct: 123 NSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLS 179
Query: 561 KLLMPNQTGIVAGVRGSRG-----YMAPEWQNSGLITVKSDVYSFGVVLLEII 608
           +       G    V+ + G     +MA E  N  + T  SDV+S+GV+L EI+
Sbjct: 180 R-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 225

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 36/243 (14%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVAR 521
           +  LL    +    L+V E M+ G L   L +L            P  ++ +++A ++A 
Sbjct: 82  VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-- 579
           G+ YL+ +   + +H D+  RN ++   +  KI DFG+ + +   +T      +G +G  
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYR--KGGKGLL 194
Query: 580 ---YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVA 636
              +MAPE    G+ T  SD++SFGVVL EI          +S  +E +L   +   ++ 
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS--NEQVLKFVMDGGYLD 252
Query: 637 GEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPPLSH 696
              N            ER+     +C Q  P +RP+   ++ +L+  +     +FP +S 
Sbjct: 253 QPDN----------CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP---SFPEVSF 299
Query: 697 VNS 699
            +S
Sbjct: 300 FHS 302

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V ++    SL   L   ET+   +  + IA   ARG+ YLH +    IIH D+K  NI 
Sbjct: 96  IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIF 152
Query: 546 IDDSWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           + +    KI DFGLA +    + +     + GS  +MAPE    Q+S   + +SDVY+FG
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
           +VL E++  +  +  N++  D+++    V    ++ + +K     V     +RM +    
Sbjct: 213 IVLYELMTGQLPYS-NINNRDQII--EMVGRGSLSPDLSK-----VRSNCPKRMKRLMAE 264
Query: 662 CIQDEPNLRPSMKNVILMLE 681
           C++ + + RPS   ++  +E
Sbjct: 265 CLKKKRDERPSFPRILAEIE 284

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V ++    SL   L   ET+   +  + IA   ARG+ YLH +    IIH D+K  NI 
Sbjct: 96  IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIF 152
Query: 546 IDDSWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           + +    KI DFGLA +    + +     + GS  +MAPE    Q+S   + +SDVY+FG
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
           +VL E++  +  +  N++  D+++    V    ++ + +K     V     +RM +    
Sbjct: 213 IVLYELMTGQLPYS-NINNRDQII--EMVGRGSLSPDLSK-----VRSNCPKRMKRLMAE 264
Query: 662 CIQDEPNLRPSMKNVILMLE 681
           C++ + + RPS   ++  +E
Sbjct: 265 CLKKKRDERPSFPRILAEIE 284

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 24/179 (13%)
Query: 511 DRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI 570
           D +  A  +++G+ YL    E++++H D+  RNIL+ +  + KISDFGL++ +    +  
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS-- 205
Query: 571 VAGVRGSRGYMAPEWQN-----SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL 625
              V+ S+G +  +W         + T +SDV+SFGV+L EI+    N    +       
Sbjct: 206 --YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--- 260
Query: 626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM 684
               ++N    G       E  D  + E M +  L C + EP+ RP   ++   LE  M
Sbjct: 261 ----LFNLLKTGHRM----ERPDNCS-EEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 24/179 (13%)
Query: 511 DRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI 570
           D +  A  +++G+ YL    E+ ++H D+  RNIL+ +  + KISDFGL++ +    +  
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS-- 205
Query: 571 VAGVRGSRGYMAPEWQN-----SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL 625
              V+ S+G +  +W         + T +SDV+SFGV+L EI+    N    +       
Sbjct: 206 --XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--- 260
Query: 626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM 684
               ++N    G       E  D  + E M +  L C + EP+ RP   ++   LE  M
Sbjct: 261 ----LFNLLKTGHRM----ERPDNCS-EEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 470 AISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHD 528
           +I  L  Y   S+   LV E    G +   L N   +P   +  R  +  +  G+LYLH 
Sbjct: 72  SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHS 130
Query: 529 ECEVQIIHCDIKLRNILIDDSWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQN 587
                I+H D+ L N+L+  +   KI+DFGLA +L MP++      + G+  Y++PE   
Sbjct: 131 H---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIAT 185
Query: 588 SGLITVKSDVYSFGVVLLEIICCRSNFEVNV--STADEVLLSTWVYNCFVAGEFNKLVEE 645
                ++SDV+S G +   ++  R  F+ +   +T ++V+L+ +    F++ E   L+ +
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQ 245
Query: 646 EVDKITLERMVKTGLLCIQDEP 667
            + +   +R+  + +L   D P
Sbjct: 246 LLRRNPADRLSLSSVL---DHP 264

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 486 LVYEFMSKGSLADLL-FNLETRPLWRDRVRIALDVARGLLYLHDEC--------EVQIIH 536
           L+  F  KGSL D L  N+ T   W +   +A  ++RGL YLH++         +  I H
Sbjct: 90  LITAFHDKGSLTDYLKGNIIT---WNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAH 146
Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQ-TGIVAGVRGSRGYMAPE-------WQNS 588
            D K +N+L+     A ++DFGLA    P +  G   G  G+R YMAPE       +Q  
Sbjct: 147 RDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRD 206
Query: 589 GLITVKSDVYSFGVVLLEII 608
             + +  D+Y+ G+VL E++
Sbjct: 207 AFLRI--DMYAMGLVLWELV 224

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 27/202 (13%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIH 536
           + +K  ++ E++  GS  DLL   E  PL  D  +IA    ++ +GL YLH E +   IH
Sbjct: 96  KDTKLWIIMEYLGGGSALDLL---EPGPL--DETQIATILREILKGLDYLHSEKK---IH 147
Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSD 596
            DIK  N+L+ +    K++DFG+A  L   Q      V G+  +MAPE         K+D
Sbjct: 148 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKAD 206
Query: 597 VYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYN-CFVAGEFNKLVEEEVDKITLERM 655
           ++S G+  +E+   R     +     +VL      N   + G ++K ++E V+       
Sbjct: 207 IWSLGITAIEL--ARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA------ 258
Query: 656 VKTGLLCIQDEPNLRPSMKNVI 677
                 C+  EP+ RP+ K ++
Sbjct: 259 ------CLNKEPSFRPTAKELL 274

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 27/202 (13%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIH 536
           + +K  ++ E++  GS  DLL   E  PL  D  +IA    ++ +GL YLH E +   IH
Sbjct: 91  KDTKLWIIMEYLGGGSALDLL---EPGPL--DETQIATILREILKGLDYLHSEKK---IH 142
Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSD 596
            DIK  N+L+ +    K++DFG+A  L   Q      V G+  +MAPE         K+D
Sbjct: 143 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKAD 201
Query: 597 VYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYN-CFVAGEFNKLVEEEVDKITLERM 655
           ++S G+  +E+   R     +     +VL      N   + G ++K ++E V+       
Sbjct: 202 IWSLGITAIEL--ARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA------ 253
Query: 656 VKTGLLCIQDEPNLRPSMKNVI 677
                 C+  EP+ RP+ K ++
Sbjct: 254 ------CLNKEPSFRPTAKELL 269

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 509 WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT 568
           + D +  A  VA+G+ +L  +     +H D+  RN+L+      KI DFGLA+ +M +  
Sbjct: 171 FEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 569 GIVAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
            +V G  R    +MAPE    G+ T+KSDV+S+G++L EI 
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 27/202 (13%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIH 536
           + +K  ++ E++  GS  DLL   E  PL  D  +IA    ++ +GL YLH E +   IH
Sbjct: 76  KDTKLWIIMEYLGGGSALDLL---EPGPL--DETQIATILREILKGLDYLHSEKK---IH 127
Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSD 596
            DIK  N+L+ +    K++DFG+A  L   Q      V G+  +MAPE         K+D
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKAD 186
Query: 597 VYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYN-CFVAGEFNKLVEEEVDKITLERM 655
           ++S G+  +E+   R     +     +VL      N   + G ++K ++E V+       
Sbjct: 187 IWSLGITAIEL--ARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA------ 238
Query: 656 VKTGLLCIQDEPNLRPSMKNVI 677
                 C+  EP+ RP+ K ++
Sbjct: 239 ------CLNKEPSFRPTAKELL 254

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRD-RVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+M+KGSL D L +     L  D  ++ +LDV   + YL        +H D+  RN+
Sbjct: 83  IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNV 139
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ +   AK+SDFGL K     Q      V+    + APE       + KSDV+SFG++L
Sbjct: 140 LVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEALREAAFSTKSDVWSFGILL 195
Query: 605 LEI 607
            EI
Sbjct: 196 WEI 198

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 27/202 (13%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIH 536
           + +K  ++ E++  GS  DLL   E  PL  D  +IA    ++ +GL YLH E +   IH
Sbjct: 76  KDTKLWIIMEYLGGGSALDLL---EPGPL--DETQIATILREILKGLDYLHSEKK---IH 127
Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSD 596
            DIK  N+L+ +    K++DFG+A  L   Q      V G+  +MAPE         K+D
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKAD 186
Query: 597 VYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYN-CFVAGEFNKLVEEEVDKITLERM 655
           ++S G+  +E+   R     +     +VL      N   + G ++K ++E V+       
Sbjct: 187 IWSLGITAIEL--ARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA------ 238
Query: 656 VKTGLLCIQDEPNLRPSMKNVI 677
                 C+  EP+ RP+ K ++
Sbjct: 239 ------CLNKEPSFRPTAKELL 254

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIA--LDVARGLLYLHDECEVQIIHCDIKLRN 543
           LV E+   GSL ++L   E  P +     ++  L  ++G+ YLH      +IH D+K  N
Sbjct: 77  LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 136
Query: 544 IL-IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +L +      KI DFG A  +  + T      +GS  +MAPE       + K DV+S+G+
Sbjct: 137 LLLVAGGTVLKICDFGTACDIQTHMTN----NKGSAAWMAPEVFEGSNYSEKCDVFSWGI 192
Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLC 662
           +L E+I  R  F+     A  ++   W  +        K + + ++ +           C
Sbjct: 193 ILWEVITRRKPFDEIGGPAFRIM---WAVHNGTRPPLIKNLPKPIESLMTR--------C 241
Query: 663 IQDEPNLRPSMKNVILMLEGTM 684
              +P+ RPSM+ ++ ++   M
Sbjct: 242 WSKDPSQRPSMEEIVKIMTHLM 263

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 490 FMSKGSLADLLFNLETRPLWRDRVRI------ALDVARGLLYLHDECEVQIIHCDIKLRN 543
           F+ + SL+D+        L++D + +      +  VA+G+ +L      + IH D+  RN
Sbjct: 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 223
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           IL+ +    KI DFGLA+ +  +   +  G  R    +MAPE     + T++SDV+SFGV
Sbjct: 224 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 283
Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLC 662
           +L EI    ++    V   +E         C    E  ++        T   M +T L C
Sbjct: 284 LLWEIFSLGASPYPGVKIDEEF--------CRRLKEGTRM---RAPDYTTPEMYQTMLDC 332
Query: 663 IQDEPNLRPSMKNVILML 680
              EP+ RP+   ++  L
Sbjct: 333 WHGEPSQRPTFSELVEHL 350

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 490 FMSKGSLADLLFNLETRPLWRDRVRI------ALDVARGLLYLHDECEVQIIHCDIKLRN 543
           F+ + SL+D+        L++D + +      +  VA+G+ +L      + IH D+  RN
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 230
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           IL+ +    KI DFGLA+ +  +   +  G  R    +MAPE     + T++SDV+SFGV
Sbjct: 231 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 290
Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLC 662
           +L EI    ++    V   +E         C    E  ++        T   M +T L C
Sbjct: 291 LLWEIFSLGASPYPGVKIDEEF--------CRRLKEGTRM---RAPDYTTPEMYQTMLDC 339
Query: 663 IQDEPNLRPSMKNVILML 680
              EP+ RP+   ++  L
Sbjct: 340 WHGEPSQRPTFSELVEHL 357

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 490 FMSKGSLADLLFNLETRPLWRDRVRI------ALDVARGLLYLHDECEVQIIHCDIKLRN 543
           F+ + SL+D+        L++D + +      +  VA+G+ +L      + IH D+  RN
Sbjct: 165 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 221
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           IL+ +    KI DFGLA+ +  +   +  G  R    +MAPE     + T++SDV+SFGV
Sbjct: 222 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 281
Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLC 662
           +L EI    ++    V   +E         C    E  ++        T   M +T L C
Sbjct: 282 LLWEIFSLGASPYPGVKIDEEF--------CRRLKEGTRM---RAPDYTTPEMYQTMLDC 330
Query: 663 IQDEPNLRPSMKNVILML 680
              EP+ RP+   ++  L
Sbjct: 331 WHGEPSQRPTFSELVEHL 348

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRD-RVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+M+KGSL D L +     L  D  ++ +LDV   + YL        +H D+  RN+
Sbjct: 264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNV 320
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ +   AK+SDFGL K     Q      V+    + APE       + KSDV+SFG++L
Sbjct: 321 LVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEALREKKFSTKSDVWSFGILL 376
Query: 605 LEI 607
            EI
Sbjct: 377 WEI 379

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 490 FMSKGSLADLLFNLETRPLWRDRVRI------ALDVARGLLYLHDECEVQIIHCDIKLRN 543
           F+ + SL+D+        L++D + +      +  VA+G+ +L      + IH D+  RN
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 228
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           IL+ +    KI DFGLA+ +  +   +  G  R    +MAPE     + T++SDV+SFGV
Sbjct: 229 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 288
Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLC 662
           +L EI    ++    V   +E         C    E  ++        T   M +T L C
Sbjct: 289 LLWEIFSLGASPYPGVKIDEEF--------CRRLKEGTRM---RAPDYTTPEMYQTMLDC 337
Query: 663 IQDEPNLRPSMKNVILML 680
              EP+ RP+   ++  L
Sbjct: 338 WHGEPSQRPTFSELVEHL 355

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIA--LDVARGLLYLHDECEVQIIHCDIKLRN 543
           LV E+   GSL ++L   E  P +     ++  L  ++G+ YLH      +IH D+K  N
Sbjct: 76  LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135
Query: 544 IL-IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +L +      KI DFG A  +  + T      +GS  +MAPE       + K DV+S+G+
Sbjct: 136 LLLVAGGTVLKICDFGTACDIQTHMTN----NKGSAAWMAPEVFEGSNYSEKCDVFSWGI 191
Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLC 662
           +L E+I  R  F+     A  ++   W  +        K + + ++ +           C
Sbjct: 192 ILWEVITRRKPFDEIGGPAFRIM---WAVHNGTRPPLIKNLPKPIESLMTR--------C 240
Query: 663 IQDEPNLRPSMKNVILMLEGTM 684
              +P+ RPSM+ ++ ++   M
Sbjct: 241 WSKDPSQRPSMEEIVKIMTHLM 262

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           +  +  VA+G+ +L      + IH D+  RNIL+ +    KI DFGLA+ +  +   +  
Sbjct: 151 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 573 G-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVY 631
           G  R    +MAPE     + T++SDV+SFGV+L EI    ++    V   +E        
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF------- 260
Query: 632 NCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML 680
            C    E  ++        T   M +T L C   EP+ RP+   ++  L
Sbjct: 261 -CRRLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 35/173 (20%)
Query: 460 GSITFLCFL----IAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFN---LETRPLW--- 509
           G +  LC L      I+ L   +HR    L + E+   G+L D L     LET P +   
Sbjct: 71  GELEVLCKLGHHPNIINLLGACEHRGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIA 129
Query: 510 ---------RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA 560
                    +  +  A DVARG+ YL    + Q IH ++  RNIL+ +++ AKI+DFGL+
Sbjct: 130 NSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLS 186
Query: 561 KLLMPNQTGIVAGVRGSRG-----YMAPEWQNSGLITVKSDVYSFGVVLLEII 608
           +       G    V+ + G     +MA E  N  + T  SDV+S+GV+L EI+
Sbjct: 187 R-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 232

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEV 532
           L Y + +   L LV   M+ G L   ++++        R V  A ++  GL  LH E   
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE--- 305
Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           +I++ D+K  NIL+DD    +ISD GLA  +   QT  + G  G+ GYMAPE   +   T
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNERYT 363
Query: 593 VKSDVYSFGVVLLEIICCRSNFE 615
              D ++ G +L E+I  +S F+
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPFQ 386

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEV 532
           L Y + +   L LV   M+ G L   ++++        R V  A ++  GL  LH E   
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE--- 305
Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           +I++ D+K  NIL+DD    +ISD GLA  +   QT  + G  G+ GYMAPE   +   T
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNERYT 363
Query: 593 VKSDVYSFGVVLLEIICCRSNFE 615
              D ++ G +L E+I  +S F+
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPFQ 386

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRD-RVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+M+KGSL D L +     L  D  ++ +LDV   + YL        +H D+  RN+
Sbjct: 92  IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNV 148
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ +   AK+SDFGL K     Q      V+    + APE       + KSDV+SFG++L
Sbjct: 149 LVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEALREKKFSTKSDVWSFGILL 204
Query: 605 LEI 607
            EI
Sbjct: 205 WEI 207

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRD-RVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+M+KGSL D L +     L  D  ++ +LDV   + YL        +H D+  RN+
Sbjct: 77  IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNV 133
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ +   AK+SDFGL K     Q      V+    + APE       + KSDV+SFG++L
Sbjct: 134 LVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEALREKKFSTKSDVWSFGILL 189
Query: 605 LEI 607
            EI
Sbjct: 190 WEI 192

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            ++ E+M+ G L + L  +  R   +  + +  DV   + YL  +   Q +H D+  RN 
Sbjct: 95  FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNC 151
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L++D    K+SDFGL++ ++ ++     G +    +  PE       + KSD+++FGV++
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 211
Query: 605 LEIICC-RSNFE--VNVSTADEVLLSTWVYNCFVAGE 638
            EI    +  +E   N  TA+ +     +Y   +A E
Sbjct: 212 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE 248

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-V 574
           +  VA+G+ +L      + IH D+  RNIL+ +    KI DFGLA+ +  +   +  G  
Sbjct: 145 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
           R    +MAPE     + T++SDV+SFGV+L EI    ++    V   +E         C 
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------CR 253
Query: 635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML 680
              E  ++        T   M +T L C   EP+ RP+   ++  L
Sbjct: 254 RLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 23/170 (13%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           +  +  VA+G+ +L      + IH D+  RNIL+ +    KI DFGLA+ +  +   +  
Sbjct: 147 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 573 G-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVY 631
           G  R    +MAPE     + T++SDV+SFGV+L EI      F +  S    V +     
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI------FSLGASPYPGVKIDE--- 254
Query: 632 NCFVAGEFNKLVEE----EVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
                 EF + ++E         T   M +T L C   EP+ RP+   ++
Sbjct: 255 ------EFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-V 574
           +  VA+G+ +L      + IH D+  RNIL+ +    KI DFGLA+ +  +   +  G  
Sbjct: 145 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
           R    +MAPE     + T++SDV+SFGV+L EI    ++    V   +E         C 
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------CR 253
Query: 635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML 680
              E  ++        T   M +T L C   EP+ RP+   ++  L
Sbjct: 254 RLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-V 574
           +  VA+G+ +L      + IH D+  RNIL+ +    KI DFGLA+ +  +   +  G  
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
           R    +MAPE     + T++SDV+SFGV+L EI    ++    V   +E         C 
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------CR 262
Query: 635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML 680
              E  ++        T   M +T L C   EP+ RP+   ++  L
Sbjct: 263 RLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRV--RIALDVARGLLYLHDECEVQIIHCDIKLRNILI 546
           E M  GSL  +L   +  P   + +  ++++ V RGL YL ++   QI+H D+K  NIL+
Sbjct: 94  EHMDGGSLDQVLKEAKRIP---EEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILV 148
Query: 547 DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLE 606
           +     K+ DFG++  L+     +     G+R YMAPE       +V+SD++S G+ L+E
Sbjct: 149 NSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVE 205
Query: 607 IICCR 611
           +   R
Sbjct: 206 LAVGR 210

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL  +   + IH D+  RNIL
Sbjct: 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 177
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 178 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 237
Query: 604 LLEI 607
           L E+
Sbjct: 238 LYEL 241

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL  +   + IH D+  RNIL
Sbjct: 97  LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 153
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 154 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 213
Query: 604 LLEI 607
           L E+
Sbjct: 214 LYEL 217

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL  +   + IH D+  RNIL
Sbjct: 108 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 164
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 165 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 224
Query: 604 LLEI 607
           L E+
Sbjct: 225 LYEL 228

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL  +   + IH D+  RNIL
Sbjct: 88  LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 144
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 145 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 204
Query: 604 LLEI 607
           L E+
Sbjct: 205 LYEL 208

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL  +   + IH D+  RNIL
Sbjct: 90  LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 146
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 147 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 206
Query: 604 LLEI 607
           L E+
Sbjct: 207 LYEL 210

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL  +   + IH D+  RNIL
Sbjct: 89  LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 145
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 146 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 205
Query: 604 LLEI 607
           L E+
Sbjct: 206 LYEL 209

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            ++ E+M+ G L + L  +  R   +  + +  DV   + YL  +   Q +H D+  RN 
Sbjct: 95  FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNC 151
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L++D    K+SDFGL++ ++ ++     G +    +  PE       + KSD+++FGV++
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 211
Query: 605 LEIICC-RSNFE--VNVSTADEVLLSTWVYNCFVAGE 638
            EI    +  +E   N  TA+ +     +Y   +A E
Sbjct: 212 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE 248

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-V 574
           +  VA+G+ +L      + IH D+  RNIL+ +    KI DFGLA+ +  +   +  G  
Sbjct: 154 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
           R    +MAPE     + T++SDV+SFGV+L EI    ++    V   +E         C 
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------CR 262
Query: 635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML 680
              E  ++        T   M +T L C   EP+ RP+   ++  L
Sbjct: 263 RLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL  +   + IH D+  RNIL
Sbjct: 95  LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 151
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 152 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 211
Query: 604 LLEI 607
           L E+
Sbjct: 212 LYEL 215

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL  +   + IH D+  RNIL
Sbjct: 96  LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 152
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 153 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 212
Query: 604 LLEI 607
           L E+
Sbjct: 213 LYEL 216

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-V 574
           +  VA+G+ +L      + IH D+  RNIL+ +    KI DFGLA+ +  +   +  G  
Sbjct: 154 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
           R    +MAPE     + T++SDV+SFGV+L EI    ++    V   +E         C 
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------CR 262
Query: 635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML 680
              E  ++        T   M +T L C   EP+ RP+   ++  L
Sbjct: 263 RLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL  +   + IH D+  RNIL
Sbjct: 93  LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 149
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 150 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 209
Query: 604 LLEI 607
           L E+
Sbjct: 210 LYEL 213

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-V 574
           +  VA+G+ +L      + IH D+  RNIL+ +    KI DFGLA+ +  +   +  G  
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
           R    +MAPE     + T++SDV+SFGV+L EI    ++    V   +E         C 
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------CR 258
Query: 635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
              E  ++        T   M +T L C   EP+ RP+   ++
Sbjct: 259 RLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL  +   + IH D+  RNIL
Sbjct: 108 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 164
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 165 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 224
Query: 604 LLEI 607
           L E+
Sbjct: 225 LYEL 228

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL  +   + IH D+  RNIL
Sbjct: 90  LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 146
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 147 VENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 206
Query: 604 LLEII 608
           L E+ 
Sbjct: 207 LYELF 211

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 8/147 (5%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNL-ETRPLWRDRVRI--ALDVARGLLYLHDEC 530
           L Y   +   L LV   M+ G +   ++N+ E  P +++   I     +  GL +LH   
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH--- 306
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           +  II+ D+K  N+L+DD    +ISD GLA  L   QT    G  G+ G+MAPE      
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEE 365
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVN 617
                D ++ GV L E+I  R  F   
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPFRAR 392

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL  +   + IH D+  RNIL
Sbjct: 94  LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 150
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 151 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 210
Query: 604 LLEI 607
           L E+
Sbjct: 211 LYEL 214

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 10/133 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ EF+  GSL + L   + +   + +++ A+ + +G+ YL      Q +H D+  RN+L
Sbjct: 102 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVL 158
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG----YMAPEWQNSGLITVKSDVYSFG 601
           ++   + KI DFGL K +  ++      V+  R     + APE        + SDV+SFG
Sbjct: 159 VESEHQVKIGDFGLTKAIETDKEXXT--VKDDRDSPVFWYAPECLMQSKFYIASDVWSFG 216
Query: 602 VVLLEIIC-CRSN 613
           V L E++  C S+
Sbjct: 217 VTLHELLTYCDSD 229

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL  +   + IH D+  RNIL
Sbjct: 90  LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 146
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 147 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 206
Query: 604 LLEI 607
           L E+
Sbjct: 207 LYEL 210

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 25/201 (12%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIH 536
           + SK  ++ E++  GS  DLL     R    D  +IA    ++ +GL YLH E +   IH
Sbjct: 92  KGSKLWIIMEYLGGGSALDLL-----RAGPFDEFQIATMLKEILKGLDYLHSEKK---IH 143
Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSD 596
            DIK  N+L+ +    K++DFG+A  L   Q      V G+  +MAPE         K+D
Sbjct: 144 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDSKAD 202
Query: 597 VYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMV 656
           ++S G+  +E+         ++     + L        + G+F K  +E +D        
Sbjct: 203 IWSLGITAIELAKGEPP-NSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDA------- 254
Query: 657 KTGLLCIQDEPNLRPSMKNVI 677
                C+  +P+ RP+ K ++
Sbjct: 255 -----CLNKDPSFRPTAKELL 270

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-V 574
           +  VA+G+ +L      + IH D+  RNIL+ +    KI DFGLA+ +  +   +  G  
Sbjct: 145 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
           R    +MAPE     + T++SDV+SFGV+L EI    ++    V   +E         C 
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------CR 253
Query: 635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML 680
              E  ++        T   M +T L C   EP+ RP+   ++  L
Sbjct: 254 RLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ EF+  GSL + L   + +   + +++ A+ + +G+ YL      Q +H D+  RN+L
Sbjct: 90  LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVL 146
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG----YMAPEWQNSGLITVKSDVYSFG 601
           ++   + KI DFGL K +  ++      V+  R     + APE        + SDV+SFG
Sbjct: 147 VESEHQVKIGDFGLTKAIETDKEXXT--VKDDRDSPVFWYAPECLMQSKFYIASDVWSFG 204
Query: 602 VVLLEII 608
           V L E++
Sbjct: 205 VTLHELL 211

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 8/147 (5%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNL-ETRPLWRDRVRI--ALDVARGLLYLHDEC 530
           L Y   +   L LV   M+ G +   ++N+ E  P +++   I     +  GL +LH   
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH--- 306
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           +  II+ D+K  N+L+DD    +ISD GLA  L   QT    G  G+ G+MAPE      
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEE 365
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVN 617
                D ++ GV L E+I  R  F   
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPFRAR 392

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-V 574
           +  VA+G+ +L      + IH D+  RNIL+ +    KI DFGLA+ +  +   +  G  
Sbjct: 145 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
           R    +MAPE     + T++SDV+SFGV+L EI    ++    V   +E         C 
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------CR 253
Query: 635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML 680
              E  ++        T   M +T L C   EP+ RP+   ++  L
Sbjct: 254 RLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 8/147 (5%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNL-ETRPLWRDRVRI--ALDVARGLLYLHDEC 530
           L Y   +   L LV   M+ G +   ++N+ E  P +++   I     +  GL +LH   
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH--- 306
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           +  II+ D+K  N+L+DD    +ISD GLA  L   QT    G  G+ G+MAPE      
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEE 365
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVN 617
                D ++ GV L E+I  R  F   
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPFRAR 392

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 8/147 (5%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNL-ETRPLWRDRVRI--ALDVARGLLYLHDEC 530
           L Y   +   L LV   M+ G +   ++N+ E  P +++   I     +  GL +LH   
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH--- 306
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           +  II+ D+K  N+L+DD    +ISD GLA  L   QT    G  G+ G+MAPE      
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEE 365
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVN 617
                D ++ GV L E+I  R  F   
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPFRAR 392

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-V 574
           +  VA+G+ +L      + IH D+  RNIL+ +    KI DFGLA+ +  +   +  G  
Sbjct: 154 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
           R    +MAPE     + T++SDV+SFGV+L EI    ++    V   +E         C 
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------CR 262
Query: 635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML 680
              E  ++        T   M +T L C   EP+ RP+   ++  L
Sbjct: 263 RLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-V 574
           +  VA+G+ +L      + IH D+  RNIL+ +    KI DFGLA+ +  +   +  G  
Sbjct: 156 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
           R    +MAPE     + T++SDV+SFGV+L EI    ++    V   +E         C 
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------CR 264
Query: 635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML 680
              E  ++        T   M +T L C   EP+ RP+   ++  L
Sbjct: 265 RLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            ++ E+M+ G L + L  +  R   +  + +  DV   + YL  +   Q +H D+  RN 
Sbjct: 75  FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNC 131
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L++D    K+SDFGL++ ++ ++     G +    +  PE       + KSD+++FGV++
Sbjct: 132 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 191
Query: 605 LEIICC-RSNFE--VNVSTADEVLLSTWVYNCFVAGE 638
            EI    +  +E   N  TA+ +     +Y   +A E
Sbjct: 192 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE 228

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            ++ E+M+ G L + L  +  R   +  + +  DV   + YL  +   Q +H D+  RN 
Sbjct: 86  FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNC 142
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L++D    K+SDFGL++ ++ ++     G +    +  PE       + KSD+++FGV++
Sbjct: 143 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 202
Query: 605 LEIICC-RSNFE--VNVSTADEVLLSTWVYNCFVAGE 638
            EI    +  +E   N  TA+ +     +Y   +A E
Sbjct: 203 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE 239

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            ++ E+M+ G L + L  +  R   +  + +  DV   + YL  +   Q +H D+  RN 
Sbjct: 79  FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNC 135
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L++D    K+SDFGL++ ++ ++     G +    +  PE       + KSD+++FGV++
Sbjct: 136 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 195
Query: 605 LEIICC-RSNFE--VNVSTADEVLLSTWVYNCFVAGE 638
            EI    +  +E   N  TA+ +     +Y   +A E
Sbjct: 196 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE 232

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ EF+  GSL + L   + R      ++    + +G+ YL  +   + IH D+  RNIL
Sbjct: 93  LIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 149
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 150 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 209
Query: 604 LLEI 607
           L E+
Sbjct: 210 LYEL 213

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            ++ E+M+ G L + L  +  R   +  + +  DV   + YL  +   Q +H D+  RN 
Sbjct: 80  FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNC 136
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L++D    K+SDFGL++ ++ ++     G +    +  PE       + KSD+++FGV++
Sbjct: 137 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 196
Query: 605 LEIICC-RSNFE--VNVSTADEVLLSTWVYNCFVAGE 638
            EI    +  +E   N  TA+ +     +Y   +A E
Sbjct: 197 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE 233

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-V 574
           +  VA+G+ +L      + IH D+  RNIL+ +    KI DFGLA+ +  +   +  G  
Sbjct: 191 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
           R    +MAPE     + T++SDV+SFGV+L EI    ++    V   +E         C 
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--------CR 299
Query: 635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
              E  ++        T   M +T L C   EP+ RP+   ++
Sbjct: 300 RLKEGTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 339

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 37/231 (16%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVAR 521
           +  LL    +    L++ E M++G L   L +L            P     +++A ++A 
Sbjct: 75  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 134
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-- 579
           G+ YL+     + +H D+  RN ++ + +  KI DFG+ + +           +G +G  
Sbjct: 135 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX----RKGGKGLL 187
Query: 580 ---YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFV- 635
              +M+PE    G+ T  SDV+SFGVVL EI          +S  ++VL        FV 
Sbjct: 188 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-EQVLR-------FVM 239
Query: 636 -AGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME 685
             G  +K   +    + LE M     +C Q  P +RPS   +I  ++  ME
Sbjct: 240 EGGLLDK--PDNCPDMLLELM----RMCWQYNPKMRPSFLEIISSIKEEME 284

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD 548
           E M  GSL D +     R   +   ++++ V +GL YL ++   +I+H D+K  NIL++ 
Sbjct: 146 EHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNS 202
Query: 549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               K+ DFG++  L+     +     G+R YM+PE       +V+SD++S G+ L+E+ 
Sbjct: 203 RGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 259
Query: 609 CCRSNFEVNVSTADEVLLSTWVYNCFVAGE 638
             R  + +    A E+ L   ++ C V G+
Sbjct: 260 VGR--YPIPPPDAKELEL---MFGCQVEGD 284

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            ++ E+M+ G L + L  +  R   +  + +  DV   + YL  +   Q +H D+  RN 
Sbjct: 80  FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNC 136
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L++D    K+SDFGL++ ++ ++     G +    +  PE       + KSD+++FGV++
Sbjct: 137 LVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 196
Query: 605 LEIICC-RSNFE--VNVSTADEVLLSTWVYNCFVAGE 638
            EI    +  +E   N  TA+ +     +Y   +A E
Sbjct: 197 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE 233

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V ++    SL   L   ET+      + IA   A+G+ YLH +    IIH D+K  NI 
Sbjct: 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIF 164
Query: 546 IDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           + +    KI DFGLA +    + +  V    GS  +MAPE    Q++   + +SDVYS+G
Sbjct: 165 LHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYG 224
Query: 602 VVLLEIICCRSNFEVNVSTADEVL-----------LSTWVYNCFVAGEFNKLVEEEVDKI 650
           +VL E++     +  +++  D+++           LS    NC  A    +LV + V K+
Sbjct: 225 IVLYELMTGELPYS-HINNRDQIIFMVGRGYASPDLSKLYKNCPKA--MKRLVADCVKKV 281
Query: 651 TLER 654
             ER
Sbjct: 282 KEER 285

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVAR 521
           +  LL    +    L++ E M++G L   L +L            P     +++A ++A 
Sbjct: 84  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-- 579
           G+ YL+     + +H D+  RN ++ + +  KI DFG+ + +           +G +G  
Sbjct: 144 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX----RKGGKGLL 196
Query: 580 ---YMAPEWQNSGLITVKSDVYSFGVVLLEI 607
              +M+PE    G+ T  SDV+SFGVVL EI
Sbjct: 197 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E++   +L D++      P+   R + +  D  + L + H      IIH D+K  NI
Sbjct: 93  IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 545 LIDDSWRAKISDFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           LI  +   K+ DFG+A+ +    N     A V G+  Y++PE      +  +SDVYS G 
Sbjct: 148 LISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 603 VLLEIICCRSNF 614
           VL E++     F
Sbjct: 208 VLYEVLTGEPPF 219

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           R    ++V E+M  GSL   L   + +      V +   V  G+ YL D   +  +H D+
Sbjct: 121 RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDL 177
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RN+L+D +   K+SDFGL+++L   P+      G +    + APE       +  SDV
Sbjct: 178 AARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDV 237
Query: 598 YSFGVVLLEIIC 609
           +SFGVV+ E++ 
Sbjct: 238 WSFGVVMWEVLA 249

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L     R      ++    + +G+ YL  +   + IH D+  RNIL
Sbjct: 93  LIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL 149
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 150 VENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 209
Query: 604 LLEI 607
           L E+
Sbjct: 210 LYEL 213

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 486 LVYEFMSKGSLADLLFN----LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKL 541
           +V E++S G L + L +    LE   L    + +  DV  G+ +L      Q IH D+  
Sbjct: 80  IVTEYISNGCLLNYLRSHGKGLEPSQL----LEMCYDVCEGMAFLESH---QFIHRDLAA 132
Query: 542 RNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFG 601
           RN L+D     K+SDFG+ + ++ +Q     G +    + APE  +    + KSDV++FG
Sbjct: 133 RNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFG 192
Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
           +++ E+         ++ T  EV+L           + ++L    +   T+ +++ +   
Sbjct: 193 ILMWEVFSL-GKMPYDLYTNSEVVLKV--------SQGHRLYRPHLASDTIYQIMYS--- 240
Query: 662 CIQDEPNLRPSMKNVILMLEGTME 685
           C  + P  RP+ + ++  +E   E
Sbjct: 241 CWHELPEKRPTFQQLLSSIEPLRE 264

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V ++    SL   L  +ET+      + IA   A+G+ YLH +    IIH D+K  NI 
Sbjct: 85  IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIF 141
Query: 546 IDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           + +    KI DFGLA +    + +     + GS  +MAPE    Q+    + +SDVY+FG
Sbjct: 142 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 201
Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
           +VL E++  +  +  N++  D+++    V   +++ + +K V     K     M +    
Sbjct: 202 IVLYELMTGQLPYS-NINNRDQIIFM--VGRGYLSPDLSK-VRSNCPKAMKRLMAE---- 253
Query: 662 CIQDEPNLRPSMKNVILMLE 681
           C++ + + RP    ++  +E
Sbjct: 254 CLKKKRDERPLFPQILASIE 273

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 85  REPPFYIITEFMTYGNLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEKK---N 136
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 197 KSDVWAFGVLLWEI 210

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V ++    SL   L  +ET+      + IA   A+G+ YLH +    IIH D+K  NI 
Sbjct: 82  IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIF 138
Query: 546 IDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           + +    KI DFGLA +    + +     + GS  +MAPE    Q+    + +SDVY+FG
Sbjct: 139 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 198
Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
           +VL E++  +  +  N++  D+++    V   +++ + +K V     K     M +    
Sbjct: 199 IVLYELMTGQLPYS-NINNRDQIIFM--VGRGYLSPDLSK-VRSNCPKAMKRLMAE---- 250
Query: 662 CIQDEPNLRPSMKNVILMLE 681
           C++ + + RP    ++  +E
Sbjct: 251 CLKKKRDERPLFPQILASIE 270

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 81  REPPFYIIIEFMTYGNLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEKK---N 132
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 193 KSDVWAFGVLLWEI 206

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V ++    SL   L  +ET+      + IA   A+G+ YLH +    IIH D+K  NI 
Sbjct: 85  IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIF 141
Query: 546 IDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           + +    KI DFGLA +    + +     + GS  +MAPE    Q+    + +SDVY+FG
Sbjct: 142 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 201
Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
           +VL E++  +  +  N++  D+++    V   +++ + +K V     K     M +    
Sbjct: 202 IVLYELMTGQLPYS-NINNRDQIIFM--VGRGYLSPDLSK-VRSNCPKAMKRLMAE---- 253
Query: 662 CIQDEPNLRPSMKNVILMLE 681
           C++ + + RP    ++  +E
Sbjct: 254 CLKKKRDERPLFPQILASIE 273

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S+  +++ EFM  GSL   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 105 KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDL 161
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM-----PNQTGIVAGVRGSRGYMAPEWQNSGLITVK 594
             RNIL++ +   K+SDFGL++ L      P  T  + G    R + APE       T  
Sbjct: 162 AARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR-WTAPEAIQYRKFTSA 220
Query: 595 SDVYSFGVVLLEII 608
           SDV+S+G+V+ E++
Sbjct: 221 SDVWSYGIVMWEVM 234

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 82  REPPFYIITEFMTYGNLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEKK---N 133
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSI 193
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 194 KSDVWAFGVLLWEI 207

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 81  REPPFYIITEFMTYGNLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEKK---N 132
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSI 192
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 193 KSDVWAFGVLLWEI 206

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 85  REPPFYIIIEFMTYGNLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEKK---N 136
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 197 KSDVWAFGVLLWEI 210

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 93  REPPFYIITEFMTYGNLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEKK---N 144
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 204
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 205 KSDVWAFGVLLWEI 218

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V ++    SL   L  +ET+      + IA   A+G+ YLH +    IIH D+K  NI 
Sbjct: 80  IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIF 136
Query: 546 IDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           + +    KI DFGLA +    + +     + GS  +MAPE    Q+    + +SDVY+FG
Sbjct: 137 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
           +VL E++  +  +  N++  D+++    V   +++ + +K V     K     M +    
Sbjct: 197 IVLYELMTGQLPYS-NINNRDQIIFM--VGRGYLSPDLSK-VRSNCPKAMKRLMAE---- 248
Query: 662 CIQDEPNLRPSMKNVILMLE 681
           C++ + + RP    ++  +E
Sbjct: 249 CLKKKRDERPLFPQILASIE 268

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 85  REPPFYIITEFMTYGNLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEKK---N 136
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 197 KSDVWAFGVLLWEI 210

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   ++V E+M  GSL   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDL 173
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNILI+ +   K+SDFGLA++L   P       G +    + +PE       T  SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 598 YSFGVVLLEII 608
           +S+G+VL E++
Sbjct: 234 WSYGIVLWEVM 244

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V ++    SL   L  +ET+      + IA   A+G+ YLH +    IIH D+K  NI 
Sbjct: 80  IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIF 136
Query: 546 IDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           + +    KI DFGLA +    + +     + GS  +MAPE    Q+    + +SDVY+FG
Sbjct: 137 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
           +VL E++  +  +  N++  D+++    V   +++ + +K V     K     M +    
Sbjct: 197 IVLYELMTGQLPYS-NINNRDQIIFM--VGRGYLSPDLSK-VRSNCPKAMKRLMAE---- 248
Query: 662 CIQDEPNLRPSMKNVILMLE 681
           C++ + + RP    ++  +E
Sbjct: 249 CLKKKRDERPLFPQILASIE 268

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 78  REPPFYIIIEFMTYGNLLDYL-----RECNRQEVSAVVLLYMATQISSAMEYLEKK---N 129
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 190 KSDVWAFGVLLWEI 203

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 84  REPPFYIITEFMTYGNLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEKK---N 135
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 195
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 196 KSDVWAFGVLLWEI 209

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E++   +L D++      P+   R + +  D  + L + H      IIH D+K  NI
Sbjct: 93  IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 545 LIDDSWRAKISDFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +I  +   K+ DFG+A+ +    N     A V G+  Y++PE      +  +SDVYS G 
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 603 VLLEIICCRSNF 614
           VL E++     F
Sbjct: 208 VLYEVLTGEPPF 219

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 80  REPPFYIITEFMTYGNLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEKK---N 131
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 192 KSDVWAFGVLLWEI 205

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E++   +L D++      P+   R + +  D  + L + H      IIH D+K  NI
Sbjct: 93  IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 545 LIDDSWRAKISDFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +I  +   K+ DFG+A+ +    N     A V G+  Y++PE      +  +SDVYS G 
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 603 VLLEIICCRSNF 614
           VL E++     F
Sbjct: 208 VLYEVLTGEPPF 219

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E++   +L D++      P+   R + +  D  + L + H      IIH D+K  NI
Sbjct: 93  IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 545 LIDDSWRAKISDFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +I  +   K+ DFG+A+ +    N     A V G+  Y++PE      +  +SDVYS G 
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 603 VLLEIICCRSNF 614
           VL E++     F
Sbjct: 208 VLYEVLTGEPPF 219

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 80  REPPFYIITEFMTYGNLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEKK---N 131
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 192 KSDVWAFGVLLWEI 205

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYM 581
           G+ + HD   ++I+H DIK +NILID +   KI DFG+AK L          V G+  Y 
Sbjct: 123 GIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYF 179
Query: 582 APEWQNSGLITVKSDVYSFGVVLLEIICCRSNF--EVNVSTA 621
           +PE          +D+YS G+VL E++     F  E  VS A
Sbjct: 180 SPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA 221

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V ++    SL   L  +ET+      + IA   A+G+ YLH +    IIH D+K  NI 
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIF 164
Query: 546 IDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           + +    KI DFGLA +    + +     + GS  +MAPE    Q+    + +SDVY+FG
Sbjct: 165 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 224
Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
           +VL E++  +  +  N++  D+++    V   +++ + +K V     K     M +    
Sbjct: 225 IVLYELMTGQLPYS-NINNRDQIIF--MVGRGYLSPDLSK-VRSNCPKAMKRLMAE---- 276
Query: 662 CIQDEPNLRPSMKNVILMLE 681
           C++ + + RP    ++  +E
Sbjct: 277 CLKKKRDERPLFPQILASIE 296

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 85  REPPFYIITEFMTYGNLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEKK---N 136
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 197 KSDVWAFGVLLWEI 210

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 82  REPPFYIITEFMTYGNLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEKK---N 133
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 194 KSDVWAFGVLLWEI 207

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           R    ++V E+M  GSL   L   + +      V +   V  G+ YL D   +  +H D+
Sbjct: 121 RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDL 177
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RN+L+D +   K+SDFGL+++L   P+      G +    + APE       +  SDV
Sbjct: 178 AARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDV 237
Query: 598 YSFGVVLLEIIC 609
           +SFGVV+ E++ 
Sbjct: 238 WSFGVVMWEVLA 249

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 78  REPPFYIITEFMTYGNLLDYL-----RECNRQEVSAVVLLYMATQISSAMEYLEKK---N 129
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 190 KSDVWAFGVLLWEI 203

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL  +   + IH ++  RNIL
Sbjct: 91  LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRNLATRNIL 147
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +++  R KI DFGL K+L  ++        G     + APE       +V SDV+SFGVV
Sbjct: 148 VENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 207
Query: 604 LLEII 608
           L E+ 
Sbjct: 208 LYELF 212

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 80  REPPFYIIIEFMTYGNLLDYL-----RECNRQEVSAVVLLYMATQISSAMEYLEKK---N 131
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 192 KSDVWAFGVLLWEI 205

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 82  REPPFYIITEFMTYGNLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEKK---N 133
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 194 KSDVWAFGVLLWEI 207

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD 548
           E M  GSL D +     R   +   ++++ V +GL YL ++   +I+H D+K  NIL++ 
Sbjct: 111 EHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNS 167
Query: 549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               K+ DFG++  L+     +     G+R YM+PE       +V+SD++S G+ L+E+ 
Sbjct: 168 RGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 224
Query: 609 CCRSNFEVNVSTADEVLLSTWVYNCFVAGE 638
             R  + +    A E+ L   ++ C V G+
Sbjct: 225 VGR--YPIPPPDAKELEL---MFGCQVEGD 249

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E++   +L D++      P+   R + +  D  + L + H      IIH D+K  NI
Sbjct: 93  IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 545 LIDDSWRAKISDFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +I  +   K+ DFG+A+ +    N     A V G+  Y++PE      +  +SDVYS G 
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 603 VLLEIICCRSNF 614
           VL E++     F
Sbjct: 208 VLYEVLTGEPPF 219

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 80  REPPFYIITEFMTYGNLLDYL-----RECNRQEVSAVVLLYMATQISSAMEYLEKK---N 131
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 192 KSDVWAFGVLLWEI 205

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V ++    SL   L  +ET+      + IA   A+G+ YLH +    IIH D+K  NI 
Sbjct: 107 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIF 163
Query: 546 IDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           + +    KI DFGLA +    + +     + GS  +MAPE    Q+    + +SDVY+FG
Sbjct: 164 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 223
Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
           +VL E++  +  +  N++  D+++    V   +++ + +K V     K     M +    
Sbjct: 224 IVLYELMTGQLPYS-NINNRDQIIF--MVGRGYLSPDLSK-VRSNCPKAMKRLMAE---- 275
Query: 662 CIQDEPNLRPSMKNVILMLE 681
           C++ + + RP    ++  +E
Sbjct: 276 CLKKKRDERPLFPQILASIE 295

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVAR 521
           +  LL    +    L++ E M++G L   L +L            P     +++A ++A 
Sbjct: 90  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 149
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-- 579
           G+ YL+     + +H D+  RN ++ + +  KI DFG+ + +   +T      +G +G  
Sbjct: 150 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYR--KGGKGLL 202
Query: 580 ---YMAPEWQNSGLITVKSDVYSFGVVLLEI 607
              +M+PE    G+ T  SDV+SFGVVL EI
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVAR 521
           +  LL    +    L++ E M++G L   L +L            P     +++A ++A 
Sbjct: 84  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-- 579
           G+ YL+     + +H D+  RN ++ + +  KI DFG+ + +   +T      +G +G  
Sbjct: 144 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYR--KGGKGLL 196
Query: 580 ---YMAPEWQNSGLITVKSDVYSFGVVLLEI 607
              +M+PE    G+ T  SDV+SFGVVL EI
Sbjct: 197 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 85  REPPFYIITEFMTYGNLLDYL-----RECNRQEVSAVVLLYMATQISSAMEYLEKK---N 136
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 197 KSDVWAFGVLLWEI 210

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 80  REPPFYIITEFMTYGNLLDYL-----RECNRQEVSAVVLLYMATQISSAMEYLEKK---N 131
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 192 KSDVWAFGVLLWEI 205

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD 548
           E M  GSL D +     R   +   ++++ V +GL YL ++   +I+H D+K  NIL++ 
Sbjct: 84  EHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNS 140
Query: 549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               K+ DFG++  L+     +     G+R YM+PE       +V+SD++S G+ L+E+ 
Sbjct: 141 RGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 609 CCRSNFEVNVSTADEVLLSTWVYNCFVAGE 638
             R  + +    A E+ L   ++ C V G+
Sbjct: 198 VGR--YPIPPPDAKELEL---MFGCQVEGD 222

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVAR 521
           +  LL    +    L++ E M++G L   L +L            P     +++A ++A 
Sbjct: 83  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-- 579
           G+ YL+     + +H D+  RN ++ + +  KI DFG+ + +   +T      +G +G  
Sbjct: 143 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYR--KGGKGLL 195
Query: 580 ---YMAPEWQNSGLITVKSDVYSFGVVLLEI 607
              +M+PE    G+ T  SDV+SFGVVL EI
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVAR 521
           +  LL    +    L++ E M++G L   L +L            P     +++A ++A 
Sbjct: 77  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-- 579
           G+ YL+     + +H D+  RN ++ + +  KI DFG+ + +   +T      +G +G  
Sbjct: 137 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYR--KGGKGLL 189
Query: 580 ---YMAPEWQNSGLITVKSDVYSFGVVLLEI 607
              +M+PE    G+ T  SDV+SFGVVL EI
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD 548
           E M  GSL D +     R   +   ++++ V +GL YL ++   +I+H D+K  NIL++ 
Sbjct: 84  EHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNS 140
Query: 549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               K+ DFG++  L+     +     G+R YM+PE       +V+SD++S G+ L+E+ 
Sbjct: 141 RGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 609 CCRSNFEVNVSTADEVLLSTWVYNCFVAGE 638
             R  + +    A E+ L   ++ C V G+
Sbjct: 198 VGR--YPIPPPDAKELEL---MFGCQVEGD 222

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVAR 521
           +  LL    +    L++ E M++G L   L +L            P     +++A ++A 
Sbjct: 81  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 140
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-- 579
           G+ YL+     + +H D+  RN ++ + +  KI DFG+ + +   +T      +G +G  
Sbjct: 141 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYR--KGGKGLL 193
Query: 580 ---YMAPEWQNSGLITVKSDVYSFGVVLLEI 607
              +M+PE    G+ T  SDV+SFGVVL EI
Sbjct: 194 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 80  REPPFYIIIEFMTYGNLLDYL-----RECNRQEVSAVVLLYMATQISSAMEYLEKK---N 131
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 192 KSDVWAFGVLLWEI 205

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +++ E+M  G+L   L   +        V +   +A G+ YL     +  +H D+  RNI
Sbjct: 122 MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNI 178
Query: 545 LIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           L++ +   K+SDFGL+++L   P  T   +G +    + APE  +    T  SDV+SFG+
Sbjct: 179 LVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGI 238
Query: 603 VLLEIICCR-------SNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERM 655
           V+ E++          SN EV  +  D   L T + +C  A                  +
Sbjct: 239 VMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPM-DCPSA------------------I 279
Query: 656 VKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP 687
            +  + C Q E   RP   +++ +L+  +  P
Sbjct: 280 YQLMMQCWQQERARRPKFADIVSILDKLIRAP 311

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCD 538
           +S+K  ++ E++  GS  DLL   +  PL    +   L ++ +GL YLH E +   IH D
Sbjct: 88  KSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHSERK---IHRD 141
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           IK  N+L+ +    K++DFG+A  L   Q      V G+  +MAPE         K+D++
Sbjct: 142 IKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDFKADIW 200
Query: 599 SFGVVLLEI 607
           S G+  +E+
Sbjct: 201 SLGITAIEL 209

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E++   +L D++      P+   R + +  D  + L + H      IIH D+K  NI
Sbjct: 110 IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 164
Query: 545 LIDDSWRAKISDFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +I  +   K+ DFG+A+ +    N     A V G+  Y++PE      +  +SDVYS G 
Sbjct: 165 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 224
Query: 603 VLLEIICCRSNF 614
           VL E++     F
Sbjct: 225 VLYEVLTGEPPF 236

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 130 ADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIC 186
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
Query: 613 NF 614
            F
Sbjct: 247 IF 248

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   ++V E+M  GSL   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGFVHRDL 173
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNILI+ +   K+SDFGL+++L   P       G +    + +PE       T  SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 598 YSFGVVLLEII 608
           +S+G+VL E++
Sbjct: 234 WSYGIVLWEVM 244

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVAR 521
           +  LL    +    L++ E M++G L   L +L            P     +++A ++A 
Sbjct: 83  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-- 579
           G+ YL+     + +H D+  RN ++ + +  KI DFG+ + +   +T      +G +G  
Sbjct: 143 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYR--KGGKGLL 195
Query: 580 ---YMAPEWQNSGLITVKSDVYSFGVVLLEI 607
              +M+PE    G+ T  SDV+SFGVVL EI
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------TRPLWRDRVRIALDVAR 521
           +  LL    +    L++ E M++G L   L +L            P     +++A ++A 
Sbjct: 90  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-- 579
           G+ YL+     + +H D+  RN ++ + +  KI DFG+ + +   +T      +G +G  
Sbjct: 150 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYR--KGGKGLL 202
Query: 580 ---YMAPEWQNSGLITVKSDVYSFGVVLLEI 607
              +M+PE    G+ T  SDV+SFGVVL EI
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVAR 521
           +  LL    +    L++ E M++G L   L +L            P     +++A ++A 
Sbjct: 112 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 171
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-- 579
           G+ YL+     + +H D+  RN ++ + +  KI DFG+ + +   +T      +G +G  
Sbjct: 172 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYR--KGGKGLL 224
Query: 580 ---YMAPEWQNSGLITVKSDVYSFGVVLLEI 607
              +M+PE    G+ T  SDV+SFGVVL EI
Sbjct: 225 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQIIHCDI 539
           +V E+M  G+L D L     R   R+ V       +A  ++  + YL  +     IH D+
Sbjct: 105 IVTEYMPYGNLLDYL-----RECNREEVTAVVLLYMATQISSAMEYLEKK---NFIHRDL 156
Query: 540 KLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
             RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++KSDV++
Sbjct: 157 AARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWA 216
Query: 600 FGVVLLEI 607
           FGV+L EI
Sbjct: 217 FGVLLWEI 224

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD 548
           E M  GSL D +     R   +   ++++ V +GL YL ++   +I+H D+K  NIL++ 
Sbjct: 84  EHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNS 140
Query: 549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               K+ DFG++  L+     +     G+R YM+PE       +V+SD++S G+ L+E+ 
Sbjct: 141 RGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 609 CCRSNFEVNVSTADEVLLSTWVYNCFVAGE 638
             R  + +    A E+ L   ++ C V G+
Sbjct: 198 VGR--YPIPPPDAKELEL---MFGCQVEGD 222

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD 548
           E M  GSL D +     R   +   ++++ V +GL YL ++   +I+H D+K  NIL++ 
Sbjct: 84  EHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNS 140
Query: 549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               K+ DFG++  L+     +     G+R YM+PE       +V+SD++S G+ L+E+ 
Sbjct: 141 RGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 609 CCRSNFEVNVSTADEVLLSTWVYNCFVAGE 638
             R  + +    A E+ L   ++ C V G+
Sbjct: 198 VGR--YPIPPPDAKELEL---MFGCQVEGD 222

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 514 RIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG 573
           +IA+ + + L +LH   ++ +IH D+K  N+LI+   + K+ DFG++  L+ +    +  
Sbjct: 157 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 574 VRGSRGYMAPEWQNSGL----ITVKSDVYSFGVVLLEIICCRSNFE 615
             G + YMAPE  N  L     +VKSD++S G+ ++E+   R  ++
Sbjct: 215 --GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 78  REPPFYIITEFMTYGNLLDYL-----RECNRQEVSAVVLLYMATQISSAMEYLEKK---N 129
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 190 KSDVWAFGVLLWEI 203

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------TRPLWRDRVRIALDVAR 521
           +  LL    +    L++ E M++G L   L +L            P     +++A ++A 
Sbjct: 80  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 139
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-- 579
           G+ YL+     + +H D+  RN ++ + +  KI DFG+ + +   +T      +G +G  
Sbjct: 140 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYR--KGGKGLL 192
Query: 580 ---YMAPEWQNSGLITVKSDVYSFGVVLLEI 607
              +M+PE    G+ T  SDV+SFGVVL EI
Sbjct: 193 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 467 FLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLL 524
           FL+ + S        S+   V E+++ G   DL+F+++  R L  +  R  + +++  L 
Sbjct: 114 FLVGLHSCF---QTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAEISLALN 167
Query: 525 YLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL-LMPNQTGIVAGVRGSRGYMAP 583
           YLH   E  II+ D+KL N+L+D     K++D+G+ K  L P  T   +   G+  Y+AP
Sbjct: 168 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAP 222
Query: 584 EWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTAD 622
           E           D ++ GV++ E++  RS F++ V ++D
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI-VGSSD 260

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 37/231 (16%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVAR 521
           +  LL    +    L++ E M++G L   L +L            P     +++A ++A 
Sbjct: 77  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-- 579
           G+ YL+     + +H D+  RN  + + +  KI DFG+ + +   +T      +G +G  
Sbjct: 137 GMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY--ETDYYR--KGGKGLL 189
Query: 580 ---YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFV- 635
              +M+PE    G+ T  SDV+SFGVVL EI          +S  ++VL        FV 
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-EQVLR-------FVM 241
Query: 636 -AGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME 685
             G  +K   +    + LE M     +C Q  P +RPS   +I  ++  ME
Sbjct: 242 EGGLLDK--PDNCPDMLLELM----RMCWQYNPKMRPSFLEIISSIKEEME 286

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   ++V E+M  GSL   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDL 173
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNILI+ +   K+SDFGL+++L   P       G +    + +PE       T  SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 598 YSFGVVLLEII 608
           +S+G+VL E++
Sbjct: 234 WSYGIVLWEVM 244

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   ++V E+M  GSL   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDL 173
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNILI+ +   K+SDFGL+++L   P       G +    + +PE       T  SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 598 YSFGVVLLEII 608
           +S+G+VL E++
Sbjct: 234 WSYGIVLWEVM 244

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V ++    SL   L  +ET+      + IA   A+G+ YLH +    IIH D+K  NI 
Sbjct: 80  IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIF 136
Query: 546 IDDSWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           + +    KI DFGLA +    + +     + GS  +MAPE    Q+    + +SDVY+FG
Sbjct: 137 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
Query: 602 VVLLEIICCRSNFEVNVSTADEVLL 626
           +VL E++  +  +  N++  D+++ 
Sbjct: 197 IVLYELMTGQLPYS-NINNRDQIIF 220

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   ++V E+M  GSL   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDL 173
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNILI+ +   K+SDFGL+++L   P       G +    + +PE       T  SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 598 YSFGVVLLEII 608
           +S+G+VL E++
Sbjct: 234 WSYGIVLWEVM 244

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   ++V E+M  GSL   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDL 173
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNILI+ +   K+SDFGL+++L   P       G +    + +PE       T  SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 598 YSFGVVLLEII 608
           +S+G+VL E++
Sbjct: 234 WSYGIVLWEVM 244

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   ++V E+M  GSL   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 115 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDL 171
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNILI+ +   K+SDFGL+++L   P       G +    + +PE       T  SDV
Sbjct: 172 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 231
Query: 598 YSFGVVLLEII 608
           +S+G+VL E++
Sbjct: 232 WSYGIVLWEVM 242

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   ++V E+M  GSL   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 88  KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDL 144
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNILI+ +   K+SDFGL+++L   P       G +    + +PE       T  SDV
Sbjct: 145 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 204
Query: 598 YSFGVVLLEII 608
           +S+G+VL E++
Sbjct: 205 WSYGIVLWEVM 215

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 511 DRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI 570
           D +  +  VARG+ +L      + IH D+  RNIL+ ++   KI DFGLA+ +  N   +
Sbjct: 200 DLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYV 256
Query: 571 VAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
             G  R    +MAPE     + + KSDV+S+GV+L EI 
Sbjct: 257 RKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIF 295

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   ++V E+M  GSL   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 105 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDL 161
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNILI+ +   K+SDFGL+++L   P       G +    + +PE       T  SDV
Sbjct: 162 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 221
Query: 598 YSFGVVLLEII 608
           +S+G+VL E++
Sbjct: 222 WSYGIVLWEVM 232

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV + M  G L D +     R   +D +   + +A+G+ YL D   V+++H D+  RN+L
Sbjct: 95  LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED---VRLVHRDLAARNVL 151
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVA-GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           +      KI+DFGLA+LL  ++T   A G +    +MA E       T +SDV+S+GV +
Sbjct: 152 VKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTV 211
Query: 605 LEII 608
            E++
Sbjct: 212 WELM 215

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V ++    SL   L  +ET+      + IA   A+G+ YLH +    IIH D+K  NI 
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIF 164
Query: 546 IDDSWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           + +    KI DFGLA +    + +     + GS  +MAPE    Q+    + +SDVY+FG
Sbjct: 165 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 224
Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
           +VL E++  +  +  N++  D+++    V   +++ + +K V     K     M +    
Sbjct: 225 IVLYELMTGQLPYS-NINNRDQIIF--MVGRGYLSPDLSK-VRSNCPKAMKRLMAE---- 276
Query: 662 CIQDEPNLRPSMKNVILMLE 681
           C++ + + RP    ++  +E
Sbjct: 277 CLKKKRDERPLFPQILASIE 296

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   ++V E+M  GSL   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDL 173
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNILI+ +   K+SDFGL ++L   P       G +    + +PE       T  SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 598 YSFGVVLLEII 608
           +S+G+VL E++
Sbjct: 234 WSYGIVLWEVM 244

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V ++    SL   L  +ET+      + IA   A+G+ YLH +    IIH D+K  NI 
Sbjct: 100 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIF 156
Query: 546 IDDSWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           + +    KI DFGLA +    + +     + GS  +MAPE    Q+    + +SDVY+FG
Sbjct: 157 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 216
Query: 602 VVLLEIICCRSNFEVNVSTADEVLL 626
           +VL E++  +  +  N++  D+++ 
Sbjct: 217 IVLYELMTGQLPYS-NINNRDQIIF 240

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 467 FLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLL 524
           FL+ + S        S+   V E+++ G   DL+F+++  R L  +  R  + +++  L 
Sbjct: 82  FLVGLHSCF---QTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAEISLALN 135
Query: 525 YLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL-LMPNQTGIVAGVRGSRGYMAP 583
           YLH   E  II+ D+KL N+L+D     K++D+G+ K  L P  T   +   G+  Y+AP
Sbjct: 136 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAP 190
Query: 584 EWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTAD 622
           E           D ++ GV++ E++  RS F++ V ++D
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI-VGSSD 228

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 326 REPPFYIITEFMTYGNLLDYL-----RECNRQEVNAVVLLYMATQISSAMEYLEKK---N 377
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH ++  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 438 KSDVWAFGVLLWEI 451

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 15/167 (8%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-V 574
           +  VA+G+ +L  +     IH D+  RNIL+      KI DFGLA+ +  +   +V G  
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
           R    +MAPE   + + T +SDV+S+G+ L E+      F +  S    + + +  Y   
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL------FSLGSSPYPGMPVDSKFYKMI 284
Query: 635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
             G   +++  E     +  ++KT   C   +P  RP+ K ++ ++E
Sbjct: 285 KEG--FRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 326

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 467 FLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLL 524
           FL+ + S        S+   V E+++ G   DL+F+++  R L  +  R  + +++  L 
Sbjct: 71  FLVGLHSCF---QTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAEISLALN 124
Query: 525 YLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL-LMPNQTGIVAGVRGSRGYMAP 583
           YLH   E  II+ D+KL N+L+D     K++D+G+ K  L P  T   +   G+  Y+AP
Sbjct: 125 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAP 179
Query: 584 EWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTAD 622
           E           D ++ GV++ E++  RS F++ V ++D
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI-VGSSD 217

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 467 FLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLL 524
           FL+ + S        S+   V E+++ G   DL+F+++  R L  +  R  + +++  L 
Sbjct: 67  FLVGLHSCF---QTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAEISLALN 120
Query: 525 YLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL-LMPNQTGIVAGVRGSRGYMAP 583
           YLH   E  II+ D+KL N+L+D     K++D+G+ K  L P  T   +   G+  Y+AP
Sbjct: 121 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAP 175
Query: 584 EWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTAD 622
           E           D ++ GV++ E++  RS F++ V ++D
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI-VGSSD 213

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 514 RIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG 573
           +IA+ + + L +LH   ++ +IH D+K  N+LI+   + K+ DFG++  L+ +    +  
Sbjct: 113 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 574 VRGSRGYMAPEWQNSGL----ITVKSDVYSFGVVLLEIICCRSNFE 615
             G + YMAPE  N  L     +VKSD++S G+ ++E+   R  ++
Sbjct: 171 --GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR------IALDVARGLLYLHDECEVQ 533
           R     ++ EFM+ G+L D L     R   R  V       +A  ++  + YL  +    
Sbjct: 287 REPPFYIITEFMTYGNLLDYL-----RECNRQEVSAVVLLYMATQISSAMEYLEKK---N 338
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            IH ++  RN L+ ++   K++DFGL++L+  +     AG +    + APE       ++
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 398
Query: 594 KSDVYSFGVVLLEI 607
           KSDV++FGV+L EI
Sbjct: 399 KSDVWAFGVLLWEI 412

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIX 166
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 613 NF 614
            F
Sbjct: 227 IF 228

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           R    ++V EFM  G+L   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 115 RGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLAD---MGYVHRDL 171
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNIL++ +   K+SDFGL++++   P       G +    + APE       T  SDV
Sbjct: 172 AARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDV 231
Query: 598 YSFGVVLLEII 608
           +S+G+V+ E++
Sbjct: 232 WSYGIVMWEVM 242

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 519 VARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGS 577
           VA+G+ +L  +     IH D+  RNIL+      KI DFGLA+ +  +   +V G  R  
Sbjct: 154 VAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 578 RGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAG 637
             +MAPE   + + T +SDV+S+G+ L E+      F +  S    + + +  Y     G
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWEL------FSLGSSPYPGMPVDSKFYKMIKEG 264
Query: 638 EFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
              +++  E     +  ++KT   C   +P  RP+ K ++ ++E
Sbjct: 265 --FRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 303

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 519 VARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP--NQTGIVAGVRG 576
           + RGL Y+H      ++H D+K  N+LI+ +   KI DFGLA++  P  + TG +     
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +R Y APE   NS   T   D++S G +L E++  R  F
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIC 166
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 613 NF 614
            F
Sbjct: 227 IF 228

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIC 170
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 613 NF 614
            F
Sbjct: 231 IF 232

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 15/167 (8%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-V 574
           +  VA+G+ +L  +     IH D+  RNIL+      KI DFGLA+ +  +   +V G  
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
           R    +MAPE   + + T +SDV+S+G+ L E+      F +  S    + + +  Y   
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL------FSLGSSPYPGMPVDSKFYKMI 284
Query: 635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
             G   +++  E     +  ++KT   C   +P  RP+ K ++ ++E
Sbjct: 285 KEG--FRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 326

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIC 166
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 613 NF 614
            F
Sbjct: 227 IF 228

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 19/138 (13%)
Query: 486 LVYEFMSKGSLADLL---------------FNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L                N E +   +D V  A  VARG+ YL  + 
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK- 169
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPEWQNSG 589
             + IH D+  RN+L+ +    KI+DFGLA+ +   +        R    +MAPE     
Sbjct: 170 --KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDR 227
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T +SDV+SFGV+L EI
Sbjct: 228 IYTHQSDVWSFGVLLWEI 245

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 112 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKIC 168
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 613 NF 614
            F
Sbjct: 229 IF 230

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 19/138 (13%)
Query: 486 LVYEFMSKGSLADLL---------------FNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L                N E +   +D V  A  VARG+ YL  + 
Sbjct: 152 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK- 210
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPEWQNSG 589
             + IH D+  RN+L+ +    KI+DFGLA+ +   +        R    +MAPE     
Sbjct: 211 --KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 268
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T +SDV+SFGV+L EI
Sbjct: 269 IYTHQSDVWSFGVLLWEI 286

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIC 170
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 613 NF 614
            F
Sbjct: 231 IF 232

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 112 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKIC 168
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 613 NF 614
            F
Sbjct: 229 IF 230

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 112 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKIC 168
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 613 NF 614
            F
Sbjct: 229 IF 230

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 108 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKIC 164
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
Query: 613 NF 614
            F
Sbjct: 225 IF 226

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 115 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKIC 171
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 172 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
Query: 613 NF 614
            F
Sbjct: 232 IF 233

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 108 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKIC 164
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
Query: 613 NF 614
            F
Sbjct: 225 IF 226

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 116 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKIC 172
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 173 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 232
Query: 613 NF 614
            F
Sbjct: 233 IF 234

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 107 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKIC 163
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 164 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 223
Query: 613 NF 614
            F
Sbjct: 224 IF 225

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKIC 170
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 613 NF 614
            F
Sbjct: 231 IF 232

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 118 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKIC 174
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 175 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 234
Query: 613 NF 614
            F
Sbjct: 235 IF 236

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKIC 166
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 613 NF 614
            F
Sbjct: 227 IF 228

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKIC 166
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 613 NF 614
            F
Sbjct: 227 IF 228

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
            VA+G+ +L  +     IH D+  RNIL+      KI DFGLA+ +  +   +V G  R 
Sbjct: 171 QVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 227
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVA 636
              +MAPE   + + T +SDV+S+G+ L E+      F +  S    + + +  Y     
Sbjct: 228 PVKWMAPESIFNCVYTFESDVWSYGIFLWEL------FSLGSSPYPGMPVDSKFYKMIKE 281
Query: 637 GEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
           G   +++  E     +  ++KT   C   +P  RP+ K ++ ++E
Sbjct: 282 G--FRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 321

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKIC 170
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 613 NF 614
            F
Sbjct: 231 IF 232

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD 548
           E M  GSL D +     R   +   ++++ V +GL YL ++   +I+H D+K  NIL++ 
Sbjct: 84  EHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNS 140
Query: 549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               K+ DFG++  L+     +     G+R YM+PE       +V+SD++S G+ L+E+ 
Sbjct: 141 RGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 609 CCR 611
             R
Sbjct: 198 VGR 200

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 130 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKIC 186
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
Query: 613 NF 614
            F
Sbjct: 247 IF 248

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
            VA+G+ +L  +     IH D+  RNIL+      KI DFGLA+ +  +   +V G  R 
Sbjct: 169 QVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 225
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVA 636
              +MAPE   + + T +SDV+S+G+ L E+      F +  S    + + +  Y     
Sbjct: 226 PVKWMAPESIFNCVYTFESDVWSYGIFLWEL------FSLGSSPYPGMPVDSKFYKMIKE 279
Query: 637 GEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
           G   +++  E     +  ++KT   C   +P  RP+ K ++ ++E
Sbjct: 280 G--FRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 319

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 19/138 (13%)
Query: 486 LVYEFMSKGSLADLL---------------FNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L                N E +   +D V  A  VARG+ YL  + 
Sbjct: 111 VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK- 169
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPEWQNSG 589
             + IH D+  RN+L+ +    KI+DFGLA+ +   +        R    +MAPE     
Sbjct: 170 --KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 227
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T +SDV+SFGV+L EI
Sbjct: 228 IYTHQSDVWSFGVLLWEI 245

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKIC 170
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 171 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 613 NF 614
            F
Sbjct: 231 IF 232

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
            DL   L+T+ L  D +   L  + RGL Y+H      ++H D+K  N+L++ +   KI 
Sbjct: 115 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKIC 171
Query: 556 DFGLAKLLMP--NQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRS 612
           DFGLA++  P  + TG +     +R Y APE   NS   T   D++S G +L E++  R 
Sbjct: 172 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
Query: 613 NF 614
            F
Sbjct: 232 IF 233

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD 548
           E M  GSL D +     R   +   ++++ V +GL YL ++   +I+H D+K  NIL++ 
Sbjct: 103 EHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNS 159
Query: 549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               K+ DFG++  L+ +         G+R YM+PE       +V+SD++S G+ L+E+ 
Sbjct: 160 RGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 216
Query: 609 CCR 611
             R
Sbjct: 217 VGR 219

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 19/138 (13%)
Query: 486 LVYEFMSKGSLADLL---------------FNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L                N E +   +D V  A  VARG+ YL  + 
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK- 169
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPEWQNSG 589
             + IH D+  RN+L+ +    KI+DFGLA+ +   +        R    +MAPE     
Sbjct: 170 --KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 227
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T +SDV+SFGV+L EI
Sbjct: 228 IYTHQSDVWSFGVLLWEI 245

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 19/138 (13%)
Query: 486 LVYEFMSKGSLADLL---------------FNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L                N E +   +D V  A  VARG+ YL  + 
Sbjct: 100 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK- 158
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPEWQNSG 589
             + IH D+  RN+L+ +    KI+DFGLA+ +   +        R    +MAPE     
Sbjct: 159 --KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 216
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T +SDV+SFGV+L EI
Sbjct: 217 IYTHQSDVWSFGVLLWEI 234

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 19/138 (13%)
Query: 486 LVYEFMSKGSLADLL---------------FNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L                N E +   +D V  A  VARG+ YL  + 
Sbjct: 103 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK- 161
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPEWQNSG 589
             + IH D+  RN+L+ +    KI+DFGLA+ +   +        R    +MAPE     
Sbjct: 162 --KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 219
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T +SDV+SFGV+L EI
Sbjct: 220 IYTHQSDVWSFGVLLWEI 237

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 19/138 (13%)
Query: 486 LVYEFMSKGSLADLL---------------FNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L                N E +   +D V  A  VARG+ YL  + 
Sbjct: 96  VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK- 154
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPEWQNSG 589
             + IH D+  RN+L+ +    KI+DFGLA+ +   +        R    +MAPE     
Sbjct: 155 --KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 212
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T +SDV+SFGV+L EI
Sbjct: 213 IYTHQSDVWSFGVLLWEI 230

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 19/138 (13%)
Query: 486 LVYEFMSKGSLADLL---------------FNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L                N E +   +D V  A  VARG+ YL  + 
Sbjct: 104 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK- 162
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPEWQNSG 589
             + IH D+  RN+L+ +    KI+DFGLA+ +   +        R    +MAPE     
Sbjct: 163 --KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 220
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T +SDV+SFGV+L EI
Sbjct: 221 IYTHQSDVWSFGVLLWEI 238

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S+  +++ EFM  GSL   L   + +      V +   +A G+ YL D   +  +H  +
Sbjct: 79  KSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRAL 135
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM-----PNQTGIVAGVRGSRGYMAPEWQNSGLITVK 594
             RNIL++ +   K+SDFGL++ L      P  T  + G    R + APE       T  
Sbjct: 136 AARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR-WTAPEAIQYRKFTSA 194
Query: 595 SDVYSFGVVLLEII 608
           SDV+S+G+V+ E++
Sbjct: 195 SDVWSYGIVMWEVM 208

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 19/138 (13%)
Query: 486 LVYEFMSKGSLADLL---------------FNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L                N E +   +D V  A  VARG+ YL  + 
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK- 169
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGYMAPEWQNSG 589
             + IH D+  RN+L+ +    KI+DFGLA+ +   +        R    +MAPE     
Sbjct: 170 --KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 227
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T +SDV+SFGV+L EI
Sbjct: 228 IYTHQSDVWSFGVLLWEI 245

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   ++V E M  GSL   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 117 KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGAVHRDL 173
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNILI+ +   K+SDFGL+++L   P       G +    + +PE       T  SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 598 YSFGVVLLEII 608
           +S+G+VL E++
Sbjct: 234 WSYGIVLWEVM 244

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 20/153 (13%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLL--FNLETRPLWRDRVRIALDVARGLLYLHD 528
           I+S +  +H S++  L+  +   GSL D L    L+T       +RI L +A GL +LH 
Sbjct: 97  IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC----LRIVLSIASGLAHLHI 152
Query: 529 EC-----EVQIIHCDIKLRNILIDDSWRAKISDFGLAKL--LMPNQTGIVAGVR-GSRGY 580
           E      +  I H D+K +NIL+  + +  I+D GLA +     NQ  +    R G++ Y
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 212
Query: 581 MAPEWQNSGLIT------VKSDVYSFGVVLLEI 607
           MAPE  +  +         + D+++FG+VL E+
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   ++V E M  GSL   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 88  KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDL 144
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNILI+ +   K+SDFGL+++L   P       G +    + +PE       T  SDV
Sbjct: 145 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 204
Query: 598 YSFGVVLLEII 608
           +S+G+VL E++
Sbjct: 205 WSYGIVLWEVM 215

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD 548
           E M  GSL D +     R   +   ++++ V +GL YL ++   +I+H D+K  NIL++ 
Sbjct: 87  EHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNS 143
Query: 549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               K+ DFG++  L+           G+R YM+PE       +V+SD++S G+ L+E+ 
Sbjct: 144 RGEIKLCDFGVSGQLIDEMANEFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 200
Query: 609 CCR 611
             R
Sbjct: 201 VGR 203

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   ++V E M  GSL   L   + +      V +   +A G+ YL D   +  +H D+
Sbjct: 117 KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDL 173
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNILI+ +   K+SDFGL+++L   P       G +    + +PE       T  SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 598 YSFGVVLLEII 608
           +S+G+VL E++
Sbjct: 234 WSYGIVLWEVM 244

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +S   ++V E+M  GSL   L   + +      V +   ++ G+ YL D   +  +H D+
Sbjct: 94  KSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSD---MGYVHRDL 150
Query: 540 KLRNILIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
             RNILI+ +   K+SDFGL+++L   P       G +    + APE       T  SDV
Sbjct: 151 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDV 210
Query: 598 YSFGVVLLEII 608
           +S+G+V+ E++
Sbjct: 211 WSYGIVMWEVV 221

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 20/153 (13%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLL--FNLETRPLWRDRVRIALDVARGLLYLHD 528
           I+S +  +H S++  L+  +   GSL D L    L+T       +RI L +A GL +LH 
Sbjct: 68  IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC----LRIVLSIASGLAHLHI 123
Query: 529 EC-----EVQIIHCDIKLRNILIDDSWRAKISDFGLAKL--LMPNQTGIVAGVR-GSRGY 580
           E      +  I H D+K +NIL+  + +  I+D GLA +     NQ  +    R G++ Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 581 MAPEWQNSGLIT------VKSDVYSFGVVLLEI 607
           MAPE  +  +         + D+++FG+VL E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 12/137 (8%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V EF+  G L   L +      W  ++R+ LD+A G+ Y+ ++    I+H D++  NI 
Sbjct: 98  MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIF 156
Query: 546 ---IDDSWR--AKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE--WQNSGLITVKSDVY 598
              +D++    AK++DFGL++         V+G+ G+  +MAPE         T K+D Y
Sbjct: 157 LQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY 212
Query: 599 SFGVVLLEIICCRSNFE 615
           SF ++L  I+     F+
Sbjct: 213 SFAMILYTILTGEGPFD 229

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 20/153 (13%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLL--FNLETRPLWRDRVRIALDVARGLLYLHD 528
           I+S +  +H S++  L+  +   GSL D L    L+T       +RI L +A GL +LH 
Sbjct: 68  IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC----LRIVLSIASGLAHLHI 123
Query: 529 EC-----EVQIIHCDIKLRNILIDDSWRAKISDFGLAKL--LMPNQTGIVAGVR-GSRGY 580
           E      +  I H D+K +NIL+  + +  I+D GLA +     NQ  +    R G++ Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 581 MAPEWQNSGLIT------VKSDVYSFGVVLLEI 607
           MAPE  +  +         + D+++FG+VL E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +++ E+M  GSL   L   + R      V +   +  G+ YL D   +  +H D+  RNI
Sbjct: 85  MIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYVHRDLAARNI 141
Query: 545 LIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           L++ +   K+SDFG++++L   P       G +    + APE       T  SDV+S+G+
Sbjct: 142 LVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGI 201
Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD-KITLERMVKTGLL 661
           V+ E++        ++S  D +           A E    +   +D  I L +++   L 
Sbjct: 202 VMWEVMSYGERPYWDMSNQDVIK----------AIEEGYRLPPPMDCPIALHQLM---LD 248
Query: 662 CIQDEPNLRPSMKNVILMLEGTMEIP 687
           C Q E + RP    ++ ML+  +  P
Sbjct: 249 CWQKERSDRPKFGQIVNMLDKLIRNP 274

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 473 SLLVYKHRSSKKL-LVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGLLYLHDE 529
           + L Y  ++  +L  V E+ + G   +L F+L   R    DR R    ++   L YLH  
Sbjct: 73  TALKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSALDYLH-- 127
Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPE 584
            E  +++ D+KL N+++D     KI+DFGL K       GI  G       G+  Y+APE
Sbjct: 128 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK------EGIKDGATMKXFCGTPEYLAPE 181
Query: 585 WQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
                      D +  GVV+ E++C R  F
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 91/222 (40%), Gaps = 38/222 (17%)
Query: 485 LLVYEFMSKGSL----------ADLLFNLE---TRPLWRDRV-RIALDVARGLLYLHDEC 530
           L+V+E+M  G L          A LL   E     PL   ++  +A  VA G++YL    
Sbjct: 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---A 175
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEW 585
            +  +H D+  RN L+      KI DFG+++ +       V G     +R    +M PE 
Sbjct: 176 GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR----WMPPES 231
Query: 586 QNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE 645
                 T +SDV+SFGVVL EI          +S  + +       +C   G      E 
Sbjct: 232 ILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-------DCITQGR-----EL 279
Query: 646 EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP 687
           E  +     +      C Q EP  R S+K+V   L+   + P
Sbjct: 280 ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 473 SLLVYKHRSSKKL-LVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGLLYLHDE 529
           + L Y  ++  +L  V E+ + G   +L F+L   R    DR R    ++   L YLH  
Sbjct: 72  TALKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSALDYLH-- 126
Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPE 584
            E  +++ D+KL N+++D     KI+DFGL K       GI  G       G+  Y+APE
Sbjct: 127 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK------EGIKDGATMKXFCGTPEYLAPE 180
Query: 585 WQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
                      D +  GVV+ E++C R  F
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 519 VARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP--NQTGIVAGVRG 576
           + RGL Y+H      ++H D+K  N+L++ +   KI DFGLA++  P  + TG +     
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +R Y APE   NS   T   D++S G +L E++  R  F
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP------LWRDRVRIALDVARGLLYLHDECEVQ 533
           +S  + ++ E M+ G L   L     RP         D + +A D+A G  YL    E  
Sbjct: 145 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 201
Query: 534 IIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-------YMAP 583
            IH DI  RN L+        AKI DFG+A+ +        AG     G       +M P
Sbjct: 202 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY------RAGYYRKGGCAMLPVKWMPP 255
Query: 584 EWQNSGLITVKSDVYSFGVVLLEI 607
           E    G+ T K+D +SFGV+L EI
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEI 279

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +++ E+M  GSL   L   + R      V +   +  G+ YL D   +  +H D+  RNI
Sbjct: 106 MIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNI 162
Query: 545 LIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           L++ +   K+SDFG++++L   P       G +    + APE       T  SDV+S+G+
Sbjct: 163 LVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGI 222
Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD-KITLERMVKTGLL 661
           V+ E++        ++S  D +           A E    +   +D  I L +++   L 
Sbjct: 223 VMWEVMSYGERPYWDMSNQDVIK----------AIEEGYRLPPPMDCPIALHQLM---LD 269
Query: 662 CIQDEPNLRPSMKNVILMLEGTMEIP 687
           C Q E + RP    ++ ML+  +  P
Sbjct: 270 CWQKERSDRPKFGQIVNMLDKLIRNP 295

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 473 SLLVYKHRSSKKL-LVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGLLYLHDE 529
           + L Y  ++  +L  V E+ + G   +L F+L   R    DR R    ++   L YLH  
Sbjct: 71  TALKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSALDYLH-- 125
Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPE 584
            E  +++ D+KL N+++D     KI+DFGL K       GI  G       G+  Y+APE
Sbjct: 126 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK------EGIKDGATMKXFCGTPEYLAPE 179
Query: 585 WQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
                      D +  GVV+ E++C R  F
Sbjct: 180 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 87/214 (40%), Gaps = 44/214 (20%)
Query: 410 ATKDQYASAILFIKWSSGQANLSTHRIAPPIGNDKV--NDKRKLLTVLAGCLGSITFLCF 467
           AT   YA  IL       +  ++   +A  +  ++V  N +   LT L     +   LCF
Sbjct: 174 ATGRYYAMKIL-----KKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 228
Query: 468 LIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGLLY 525
                              V E+ + G   +L F+L   R    DR R    ++   L Y
Sbjct: 229 -------------------VMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSALDY 266
Query: 526 LHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGY 580
           LH   E  +++ D+KL N+++D     KI+DFGL K       GI  G       G+  Y
Sbjct: 267 LH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK------EGIKDGATMKTFCGTPEY 318
Query: 581 MAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +APE           D +  GVV+ E++C R  F
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP------LWRDRVRIALDVARGLLYLHDECEVQ 533
           +S  + ++ E M+ G L   L     RP         D + +A D+A G  YL    E  
Sbjct: 122 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 178
Query: 534 IIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-------YMAP 583
            IH DI  RN L+        AKI DFG+A+ +        AG     G       +M P
Sbjct: 179 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY------RAGYYRKGGCAMLPVKWMPP 232
Query: 584 EWQNSGLITVKSDVYSFGVVLLEI 607
           E    G+ T K+D +SFGV+L EI
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEI 256

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 473 SLLVYKHRSSKKL-LVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGLLYLHDE 529
           + L Y  ++  +L  V E+ + G   +L F+L   R    DR R    ++   L YLH  
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSALDYLH-- 265
Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPE 584
            E  +++ D+KL N+++D     KI+DFGL K       GI  G       G+  Y+APE
Sbjct: 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK------EGIKDGATMKTFCGTPEYLAPE 319
Query: 585 WQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
                      D +  GVV+ E++C R  F
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 13/134 (9%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALD----VARGLLYLHDECEVQIIHCDIKLRNI 544
           EF  KG+L   +       L  D+V +AL+    + +G+ Y+H +   ++IH D+K  NI
Sbjct: 114 EFCDKGTLEQWIEKRRGEKL--DKV-LALELFEQITKGVDYIHSK---KLIHRDLKPSNI 167
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
            + D+ + KI DFGL   L  +  G     +G+  YM+PE  +S     + D+Y+ G++L
Sbjct: 168 FLVDTKQVKIGDFGLVTSLKND--GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLIL 225
Query: 605 LEII-CCRSNFEVN 617
            E++  C + FE +
Sbjct: 226 AELLHVCDTAFETS 239

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +++ E+M  GSL   L   + R      V +   +  G+ YL D   +  +H D+  RNI
Sbjct: 91  MIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYVHRDLAARNI 147
Query: 545 LIDDSWRAKISDFGLAKLLM--PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           L++ +   K+SDFG++++L   P       G +    + APE       T  SDV+S+G+
Sbjct: 148 LVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGI 207
Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD-KITLERMVKTGLL 661
           V+ E++        ++S  D +           A E    +   +D  I L +++   L 
Sbjct: 208 VMWEVMSYGERPYWDMSNQDVIK----------AIEEGYRLPPPMDCPIALHQLM---LD 254
Query: 662 CIQDEPNLRPSMKNVILMLEGTMEIP 687
           C Q E + RP    ++ ML+  +  P
Sbjct: 255 CWQKERSDRPKFGQIVNMLDKLIRNP 280

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP------LWRDRVRIALDVARGLLYLHDECEVQ 533
           +S  + ++ E M+ G L   L     RP         D + +A D+A G  YL    E  
Sbjct: 119 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 175
Query: 534 IIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRG-SRGYMAPEWQNSG 589
            IH DI  RN L+        AKI DFG+A+ +         G       +M PE    G
Sbjct: 176 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG 235
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T K+D +SFGV+L EI
Sbjct: 236 IFTSKTDTWSFGVLLWEI 253

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E +  G     L     R   +  +++  D A G+ YL  +C    IH D+  RN L
Sbjct: 189 IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCL 245
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR----GYMAPEWQNSGLITVKSDVYSFG 601
           + +    KISDFG+++       G+ A   G R     + APE  N G  + +SDV+SFG
Sbjct: 246 VTEKNVLKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFG 302
Query: 602 VVLLE 606
           ++L E
Sbjct: 303 ILLWE 307

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 12/126 (9%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V EF+  G+L D++ +  TR        + L V R L YLH++    +IH DIK  +IL
Sbjct: 119 VVMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSIL 173
Query: 546 IDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +    R K+SDFG    +   +P +  +V    G+  +MAPE  +      + D++S G+
Sbjct: 174 LTSDGRIKLSDFGFCAQVSKEVPKRKXLV----GTPYWMAPEVISRLPYGTEVDIWSLGI 229
Query: 603 VLLEII 608
           +++E+I
Sbjct: 230 MVIEMI 235

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E +  G     L     R   +  +++  D A G+ YL  +C    IH D+  RN L
Sbjct: 189 IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCL 245
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR----GYMAPEWQNSGLITVKSDVYSFG 601
           + +    KISDFG+++       G+ A   G R     + APE  N G  + +SDV+SFG
Sbjct: 246 VTEKNVLKISDFGMSR---EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFG 302
Query: 602 VVLLE 606
           ++L E
Sbjct: 303 ILLWE 307

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           + +   V+ G+ YL    E   +H D+  RN+L+     AKISDFGL+K L  ++    A
Sbjct: 114 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKA 170
Query: 573 GVRGS--RGYMAPEWQNSGLITVKSDVYSFGVVLLE 606
              G     + APE  N    + KSDV+SFGV++ E
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP------LWRDRVRIALDVARGLLYLHDECEVQ 533
           +S  + ++ E M+ G L   L     RP         D + +A D+A G  YL    E  
Sbjct: 119 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 175
Query: 534 IIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRG-SRGYMAPEWQNSG 589
            IH DI  RN L+        AKI DFG+A+ +         G       +M PE    G
Sbjct: 176 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG 235
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T K+D +SFGV+L EI
Sbjct: 236 IFTSKTDTWSFGVLLWEI 253

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP------LWRDRVRIALDVARGLLYLHDECEVQ 533
           +S  + ++ E M+ G L   L     RP         D + +A D+A G  YL    E  
Sbjct: 96  QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 152
Query: 534 IIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRG-SRGYMAPEWQNSG 589
            IH DI  RN L+        AKI DFG+A+ +         G       +M PE    G
Sbjct: 153 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG 212
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T K+D +SFGV+L EI
Sbjct: 213 IFTSKTDTWSFGVLLWEI 230

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNILID 547
           E+   G+L DL+ + E     RD   R+   +   L Y+H +    IIH D+K  NI ID
Sbjct: 95  EYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFID 150
Query: 548 DSWRAKISDFGLAKLL-------------MPNQTGIVAGVRGSRGYMAPE-WQNSGLITV 593
           +S   KI DFGLAK +             +P  +  +    G+  Y+A E    +G    
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210
Query: 594 KSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLE 653
           K D+YS G++  E+I   S     V+   ++          V+ EF    ++  +K+ +E
Sbjct: 211 KIDMYSLGIIFFEMIYPFSTGMERVNILKKL--------RSVSIEFPPDFDD--NKMKVE 260
Query: 654 RMVKTGLLCIQDEPNLRPSMKNVI 677
           +  K   L I  +PN RP  + ++
Sbjct: 261 K--KIIRLLIDHDPNKRPGARTLL 282

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP------LWRDRVRIALDVARGLLYLHDECEVQ 533
           +S  + ++ E M+ G L   L     RP         D + +A D+A G  YL    E  
Sbjct: 104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 160
Query: 534 IIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRG-SRGYMAPEWQNSG 589
            IH DI  RN L+        AKI DFG+A+ +         G       +M PE    G
Sbjct: 161 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG 220
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T K+D +SFGV+L EI
Sbjct: 221 IFTSKTDTWSFGVLLWEI 238

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP------LWRDRVRIALDVARGLLYLHDECEVQ 533
           +S  + ++ E M+ G L   L     RP         D + +A D+A G  YL    E  
Sbjct: 119 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 175
Query: 534 IIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRG-SRGYMAPEWQNSG 589
            IH DI  RN L+        AKI DFG+A+ +         G       +M PE    G
Sbjct: 176 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG 235
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T K+D +SFGV+L EI
Sbjct: 236 IFTSKTDTWSFGVLLWEI 253

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP------LWRDRVRIALDVARGLLYLHDECEVQ 533
           +S  + ++ E M+ G L   L     RP         D + +A D+A G  YL    E  
Sbjct: 121 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 177
Query: 534 IIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRG-SRGYMAPEWQNSG 589
            IH DI  RN L+        AKI DFG+A+ +         G       +M PE    G
Sbjct: 178 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG 237
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T K+D +SFGV+L EI
Sbjct: 238 IFTSKTDTWSFGVLLWEI 255

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 27/203 (13%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV EF   GS+ DL+ N +   L  + +  I  ++ RGL +LH     ++IH DIK +N+
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNV 160
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-----WQNSGLITVKSDVYS 599
           L+ ++   K+ DFG++  L     G      G+  +MAPE              KSD++S
Sbjct: 161 LLTENAEVKLVDFGVSAQL-DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWS 219
Query: 600 FGVVLLEI------IC----CRSNFEVNVSTADEVLLSTWV--YNCFVAGEFNKLVEEEV 647
            G+  +E+      +C     R+ F +  + A  +    W   +  F+    + LV+   
Sbjct: 220 LGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIE---SCLVKNHS 276
Query: 648 DKITLERMVKTGLLCIQDEPNLR 670
            +   E+++K     I+D+PN R
Sbjct: 277 QRPATEQLMKHPF--IRDQPNER 297

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP------LWRDRVRIALDVARGLLYLHDECEVQ 533
           +S  + ++ E M+ G L   L     RP         D + +A D+A G  YL    E  
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 161
Query: 534 IIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRG-SRGYMAPEWQNSG 589
            IH DI  RN L+        AKI DFG+A+ +         G       +M PE    G
Sbjct: 162 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG 221
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T K+D +SFGV+L EI
Sbjct: 222 IFTSKTDTWSFGVLLWEI 239

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP------LWRDRVRIALDVARGLLYLHDECEVQ 533
           +S  + ++ E M+ G L   L     RP         D + +A D+A G  YL    E  
Sbjct: 111 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 167
Query: 534 IIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRG-SRGYMAPEWQNSG 589
            IH DI  RN L+        AKI DFG+A+ +         G       +M PE    G
Sbjct: 168 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG 227
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T K+D +SFGV+L EI
Sbjct: 228 IFTSKTDTWSFGVLLWEI 245

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP------LWRDRVRIALDVARGLLYLHDECEVQ 533
           +S  + ++ E M+ G L   L     RP         D + +A D+A G  YL    E  
Sbjct: 104 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 160
Query: 534 IIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRG-SRGYMAPEWQNSG 589
            IH DI  RN L+        AKI DFG+A+ +         G       +M PE    G
Sbjct: 161 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG 220
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T K+D +SFGV+L EI
Sbjct: 221 IFTSKTDTWSFGVLLWEI 238

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 91/222 (40%), Gaps = 38/222 (17%)
Query: 485 LLVYEFMSKGSL----------ADLLFNLE---TRPLWRDRV-RIALDVARGLLYLHDEC 530
           L+V+E+M  G L          A LL   E     PL   ++  +A  VA G++YL    
Sbjct: 90  LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---A 146
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEW 585
            +  +H D+  RN L+      KI DFG+++ +       V G     +R    +M PE 
Sbjct: 147 GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR----WMPPES 202
Query: 586 QNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE 645
                 T +SDV+SFGVVL EI          +S  + +       +C   G      E 
Sbjct: 203 ILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-------DCITQGR-----EL 250
Query: 646 EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP 687
           E  +     +      C Q EP  R S+K+V   L+   + P
Sbjct: 251 ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 292

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 23/140 (16%)
Query: 486 LVYEFMSKGSLADLL-----------FNLETRP----LWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L           +++   P     ++D V     +ARG+ YL  + 
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ- 176
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQN 587
             + IH D+  RN+L+ ++   KI+DFGLA+ +  N           R    +MAPE   
Sbjct: 177 --KCIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKNTTNGRLPVKWMAPEALF 232
Query: 588 SGLITVKSDVYSFGVVLLEI 607
             + T +SDV+SFGV++ EI
Sbjct: 233 DRVYTHQSDVWSFGVLMWEI 252

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           + +   V+ G+ YL    E   +H D+  RN+L+     AKISDFGL+K L  ++    A
Sbjct: 128 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 184
Query: 573 GVRGS--RGYMAPEWQNSGLITVKSDVYSFGVVLLE 606
              G     + APE  N    + KSDV+SFGV++ E
Sbjct: 185 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 220

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP------LWRDRVRIALDVARGLLYLHDECEVQ 533
           +S  + ++ E M+ G L   L     RP         D + +A D+A G  YL    E  
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 161
Query: 534 IIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRG-SRGYMAPEWQNSG 589
            IH DI  RN L+        AKI DFG+A+ +         G       +M PE    G
Sbjct: 162 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG 221
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T K+D +SFGV+L EI
Sbjct: 222 IFTSKTDTWSFGVLLWEI 239

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 23/140 (16%)
Query: 486 LVYEFMSKGSLADLL-----------FNLETRP----LWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L           +++   P     ++D V     +ARG+ YL  + 
Sbjct: 105 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ- 163
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQN 587
             + IH D+  RN+L+ ++   KI+DFGLA+ +  N           R    +MAPE   
Sbjct: 164 --KCIHRDLTARNVLVTENNVMKIADFGLARDI--NNIDYYKKTTNGRLPVKWMAPEALF 219
Query: 588 SGLITVKSDVYSFGVVLLEI 607
             + T +SDV+SFGV++ EI
Sbjct: 220 DRVYTHQSDVWSFGVLMWEI 239

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           + +   V+ G+ YL    E   +H D+  RN+L+     AKISDFGL+K L  ++    A
Sbjct: 130 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 573 GVRGS--RGYMAPEWQNSGLITVKSDVYSFGVVLLE 606
              G     + APE  N    + KSDV+SFGV++ E
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           + +   V+ G+ YL    E   +H D+  RN+L+     AKISDFGL+K L  ++    A
Sbjct: 130 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 573 GVRGS--RGYMAPEWQNSGLITVKSDVYSFGVVLLE 606
              G     + APE  N    + KSDV+SFGV++ E
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           + +   V+ G+ YL    E   +H D+  RN+L+     AKISDFGL+K L  ++    A
Sbjct: 110 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 166
Query: 573 GVRGS--RGYMAPEWQNSGLITVKSDVYSFGVVLLE 606
              G     + APE  N    + KSDV+SFGV++ E
Sbjct: 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 23/140 (16%)
Query: 486 LVYEFMSKGSLADLL-----------FNLETRP----LWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L           +++   P     ++D V     +ARG+ YL  + 
Sbjct: 107 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ- 165
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQN 587
             + IH D+  RN+L+ ++   KI+DFGLA+ +  N           R    +MAPE   
Sbjct: 166 --KCIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKKTTNGRLPVKWMAPEALF 221
Query: 588 SGLITVKSDVYSFGVVLLEI 607
             + T +SDV+SFGV++ EI
Sbjct: 222 DRVYTHQSDVWSFGVLMWEI 241

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP------LWRDRVRIALDVARGLLYLHDECEVQ 533
           +S  + ++ E M+ G L   L     RP         D + +A D+A G  YL    E  
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 161
Query: 534 IIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRG-SRGYMAPEWQNSG 589
            IH DI  RN L+        AKI DFG+A+ +         G       +M PE    G
Sbjct: 162 FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEG 221
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T K+D +SFGV+L EI
Sbjct: 222 IFTSKTDTWSFGVLLWEI 239

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           + +   V+ G+ YL    E   +H D+  RN+L+     AKISDFGL+K L  ++    A
Sbjct: 114 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 170
Query: 573 GVRGS--RGYMAPEWQNSGLITVKSDVYSFGVVLLE 606
              G     + APE  N    + KSDV+SFGV++ E
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 23/140 (16%)
Query: 486 LVYEFMSKGSLADLL-----------FNLETRP----LWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L           +++   P     ++D V     +ARG+ YL  + 
Sbjct: 110 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ- 168
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQN 587
             + IH D+  RN+L+ ++   KI+DFGLA+ +  N           R    +MAPE   
Sbjct: 169 --KCIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKKTTNGRLPVKWMAPEALF 224
Query: 588 SGLITVKSDVYSFGVVLLEI 607
             + T +SDV+SFGV++ EI
Sbjct: 225 DRVYTHQSDVWSFGVLMWEI 244

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV E++  GSL D L            +  A  +  G+ YLH +     IH D+  RN+L
Sbjct: 112 LVMEYVPLGSLRDYLPRHSIG--LAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVL 166
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +D+    KI DFGLAK +            G     + APE          SDV+SFGV 
Sbjct: 167 LDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 226
Query: 604 LLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE--EVDKITLE--RMVKT 658
           L E++  C S+        + + ++          E  +  E     DK   E   ++K 
Sbjct: 227 LYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKN 286
Query: 659 GLLCIQDEPNLRPSMKNVILMLEGTME 685
              C + E + RP+ +N+I +L+   E
Sbjct: 287 ---CWETEASFRPTFENLIPILKTVHE 310

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           + +   V+ G+ YL    E   +H D+  RN+L+     AKISDFGL+K L  ++    A
Sbjct: 108 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 164
Query: 573 GVRGS--RGYMAPEWQNSGLITVKSDVYSFGVVLLE 606
              G     + APE  N    + KSDV+SFGV++ E
Sbjct: 165 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 200

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           + +   V+ G+ YL    E   +H D+  RN+L+     AKISDFGL+K L  ++    A
Sbjct: 120 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176
Query: 573 GVRGS--RGYMAPEWQNSGLITVKSDVYSFGVVLLE 606
              G     + APE  N    + KSDV+SFGV++ E
Sbjct: 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           + +   V+ G+ YL    E   +H D+  RN+L+     AKISDFGL+K L  ++    A
Sbjct: 472 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528
Query: 573 GVRGS--RGYMAPEWQNSGLITVKSDVYSFGVVLLE 606
              G     + APE  N    + KSDV+SFGV++ E
Sbjct: 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 564

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 90/222 (40%), Gaps = 38/222 (17%)
Query: 485 LLVYEFMSKGSLADLLF-------------NLETRPLWRDRV-RIALDVARGLLYLHDEC 530
           L+V+E+M  G L   L              ++   PL   ++  +A  VA G++YL    
Sbjct: 96  LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---A 152
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEW 585
            +  +H D+  RN L+      KI DFG+++ +       V G     +R    +M PE 
Sbjct: 153 GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR----WMPPES 208
Query: 586 QNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE 645
                 T +SDV+SFGVVL EI          +S  + +       +C   G      E 
Sbjct: 209 ILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-------DCITQGR-----EL 256
Query: 646 EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP 687
           E  +     +      C Q EP  R S+K+V   L+   + P
Sbjct: 257 ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 298

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRP------LWRDRVRIALDVARGLLYLHDECEVQ 533
           +S  + ++ E M+ G L   L     RP         D + +A D+A G  YL    E  
Sbjct: 131 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENH 187
Query: 534 IIHCDIKLRNILID---DSWRAKISDFGLAKLLMPNQTGIVAGVRG-SRGYMAPEWQNSG 589
            IH DI  RN L+        AKI DFG+A+ +         G       +M PE    G
Sbjct: 188 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG 247
Query: 590 LITVKSDVYSFGVVLLEI 607
           + T K+D +SFGV+L EI
Sbjct: 248 IFTSKTDTWSFGVLLWEI 265

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           + +   V+ G+ YL    E   +H D+  RN+L+     AKISDFGL+K L  ++    A
Sbjct: 473 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 529
Query: 573 GVRGS--RGYMAPEWQNSGLITVKSDVYSFGVVLLE 606
              G     + APE  N    + KSDV+SFGV++ E
Sbjct: 530 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 565

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 19/156 (12%)
Query: 486 LVYEFMSKGSLADLL----FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKL 541
           L+ + +S G L D +    F  E     RD  R+   V   + YLHD   + I+H D+K 
Sbjct: 93  LIMQLVSGGELFDRIVEKGFYTE-----RDASRLIFQVLDAVKYLHD---LGIVHRDLKP 144
Query: 542 RNIL---IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
            N+L   +D+  +  ISDFGL+K+  P    +++   G+ GY+APE       +   D +
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 599 SFGVVLLEIICCRSNF--EVNVSTADEVLLSTWVYN 632
           S GV+   ++C    F  E +    +++L + + ++
Sbjct: 203 SIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 23/140 (16%)
Query: 486 LVYEFMSKGSLADLL-----------FNLETRP----LWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L           +++   P     ++D V     +ARG+ YL  + 
Sbjct: 164 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ- 222
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQN 587
             + IH D+  RN+L+ ++   KI+DFGLA+ +  N           R    +MAPE   
Sbjct: 223 --KCIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKKTTNGRLPVKWMAPEALF 278
Query: 588 SGLITVKSDVYSFGVVLLEI 607
             + T +SDV+SFGV++ EI
Sbjct: 279 DRVYTHQSDVWSFGVLMWEI 298

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 23/140 (16%)
Query: 486 LVYEFMSKGSLADLL-----------FNLETRP----LWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L           +++   P     ++D V     +ARG+ YL  + 
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ- 176
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQN 587
             + IH D+  RN+L+ ++   KI+DFGLA+ +  N           R    +MAPE   
Sbjct: 177 --KCIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDXXKKTTNGRLPVKWMAPEALF 232
Query: 588 SGLITVKSDVYSFGVVLLEI 607
             + T +SDV+SFGV++ EI
Sbjct: 233 DRVYTHQSDVWSFGVLMWEI 252

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 23/140 (16%)
Query: 486 LVYEFMSKGSLADLL-----------FNLETRP----LWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L           +++   P     ++D V     +ARG+ YL  + 
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ- 176
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQN 587
             + IH D+  RN+L+ ++   KI+DFGLA+ +  N           R    +MAPE   
Sbjct: 177 --KCIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDXXKKTTNGRLPVKWMAPEALF 232
Query: 588 SGLITVKSDVYSFGVVLLEI 607
             + T +SDV+SFGV++ EI
Sbjct: 233 DRVYTHQSDVWSFGVLMWEI 252

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 23/140 (16%)
Query: 486 LVYEFMSKGSLADLL-----------FNLETRP----LWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L           +++   P     ++D V     +ARG+ YL  + 
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ- 176
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQN 587
             + IH D+  RN+L+ ++   KI+DFGLA+ +  N           R    +MAPE   
Sbjct: 177 --KCIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 588 SGLITVKSDVYSFGVVLLEI 607
             + T +SDV+SFGV++ EI
Sbjct: 233 DRVYTHQSDVWSFGVLMWEI 252

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 23/140 (16%)
Query: 486 LVYEFMSKGSLADLL-----------FNLETRP----LWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L           +++   P     ++D V     +ARG+ YL  + 
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ- 176
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQN 587
             + IH D+  RN+L+ ++   KI+DFGLA+ +  N           R    +MAPE   
Sbjct: 177 --KCIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 588 SGLITVKSDVYSFGVVLLEI 607
             + T +SDV+SFGV++ EI
Sbjct: 233 DRVYTHQSDVWSFGVLMWEI 252

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 23/140 (16%)
Query: 486 LVYEFMSKGSLADLL-----------FNLETRP----LWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L           +++   P     ++D V     +ARG+ YL  + 
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ- 176
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQN 587
             + IH D+  RN+L+ ++   KI+DFGLA+ +  N           R    +MAPE   
Sbjct: 177 --KCIHRDLAARNVLVTENNVMKIADFGLARDI--NNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 588 SGLITVKSDVYSFGVVLLEI 607
             + T +SDV+SFGV++ EI
Sbjct: 233 DRVYTHQSDVWSFGVLMWEI 252

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 16/147 (10%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSL-----ADLLFNLETRPLWRDRVRIALDVARGLLYLHD 528
           L Y  ++  KL L+ +F+  G L      +++F  E    +   + +ALD      +LH 
Sbjct: 91  LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD------HLHS 144
Query: 529 ECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS 588
              + II+ D+K  NIL+D+    K++DFGL+K  + ++    +   G+  YMAPE  N 
Sbjct: 145 ---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNR 200
Query: 589 GLITVKSDVYSFGVVLLEIICCRSNFE 615
              T  +D +SFGV++ E++     F+
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQ 227

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 42/217 (19%)
Query: 485 LLVYEFMSKGSLADLLF------------NLETRPLWRDRVRIALDVARGLLYLHDECEV 532
           ++V+E+M  G L   L             N  T       + IA  +A G++YL  +   
Sbjct: 91  IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ--- 147
Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEWQN 587
             +H D+  RN L+ ++   KI DFG+++ +       V G     +R    +M PE   
Sbjct: 148 HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR----WMPPESIM 203
Query: 588 SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAG---EFNKLVE 644
               T +SDV+S GVVL EI          +S  +       V  C   G   +  +   
Sbjct: 204 YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-------VIECITQGRVLQRPRTCP 256
Query: 645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
           +EV ++ L         C Q EP++R ++K +  +L+
Sbjct: 257 QEVYELMLG--------CWQREPHMRKNIKGIHTLLQ 285

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V EF+  G L   L +      W  ++R+ LD+A G+ Y+ ++    I+H D++  NI 
Sbjct: 98  MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIF 156
Query: 546 ---IDDSWR--AKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE--WQNSGLITVKSDVY 598
              +D++    AK++DFG ++         V+G+ G+  +MAPE         T K+D Y
Sbjct: 157 LQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY 212
Query: 599 SFGVVLLEIICCRSNFE 615
           SF ++L  I+     F+
Sbjct: 213 SFAMILYTILTGEGPFD 229

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 75/138 (54%), Gaps = 10/138 (7%)
Query: 497 ADLLFNLETRPLWRDR-VRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKI 554
            DL ++L+    +++  V++ + ++   L YL ++   +IIH D+K  NIL+D+     I
Sbjct: 100 GDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHI 156
Query: 555 SDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW---QNSGLITVKSDVYSFGVVLLEIICCR 611
           +DF +A +L P +T I   + G++ YMAPE    +     +   D +S GV   E++  R
Sbjct: 157 TDFNIAAML-PRETQITT-MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
Query: 612 SNFEVNVSTADEVLLSTW 629
             + +  ST+ + ++ T+
Sbjct: 215 RPYHIRSSTSSKEIVHTF 232

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 19/156 (12%)
Query: 486 LVYEFMSKGSLADLL----FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKL 541
           L+ + +S G L D +    F  E     RD  R+   V   + YLHD   + I+H D+K 
Sbjct: 93  LIMQLVSGGELFDRIVEKGFYTE-----RDASRLIFQVLDAVKYLHD---LGIVHRDLKP 144
Query: 542 RNIL---IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
            N+L   +D+  +  ISDFGL+K+  P    +++   G+ GY+APE       +   D +
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 599 SFGVVLLEIICCRSNF--EVNVSTADEVLLSTWVYN 632
           S GV+   ++C    F  E +    +++L + + ++
Sbjct: 203 SIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 27/164 (16%)
Query: 447 DKRKLLTVLAGCLG-SITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLET 505
           D   L+ +L  CL  +I  +  L+    LL Y H     +        GS   LL N   
Sbjct: 75  DHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNI--------GS--QLLLN--- 121
Query: 506 RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP 565
              W       + +A+G++YL    E +++H D+  RN+L+      KI+DFGLA+LL  
Sbjct: 122 ---W------CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 169
Query: 566 NQTGIVA-GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
           ++    A G +    +MA E  +    T +SDV+S+GV + E++
Sbjct: 170 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 213

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 16/147 (10%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSL-----ADLLFNLETRPLWRDRVRIALDVARGLLYLHD 528
           L Y  ++  KL L+ +F+  G L      +++F  E    +   + +ALD      +LH 
Sbjct: 92  LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD------HLHS 145
Query: 529 ECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS 588
              + II+ D+K  NIL+D+    K++DFGL+K  + ++    +   G+  YMAPE  N 
Sbjct: 146 ---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNR 201
Query: 589 GLITVKSDVYSFGVVLLEIICCRSNFE 615
              T  +D +SFGV++ E++     F+
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPFQ 228

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 93/196 (47%), Gaps = 41/196 (20%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V+E +++G + ++      +PL  D+ R    D+ +G+ YLH +   +IIH DIK  N+
Sbjct: 115 MVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNL 168
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE--WQNSGLITVKS-DVYSFG 601
           L+ +    KI+DFG++         +++   G+  +MAPE   +   + + K+ DV++ G
Sbjct: 169 LVGEDGHIKIADFGVSNEFK-GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMG 227
Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
           V L                            CFV G+    ++E +  + L   +K+  L
Sbjct: 228 VTLY---------------------------CFVFGQC-PFMDERI--MCLHSKIKSQAL 257
Query: 662 CIQDEPNLRPSMKNVI 677
              D+P++   +K++I
Sbjct: 258 EFPDQPDIAEDLKDLI 273

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 19/156 (12%)
Query: 486 LVYEFMSKGSLADLL----FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKL 541
           L+ + +S G L D +    F  E     RD  R+   V   + YLHD   + I+H D+K 
Sbjct: 93  LIMQLVSGGELFDRIVEKGFYTE-----RDASRLIFQVLDAVKYLHD---LGIVHRDLKP 144
Query: 542 RNIL---IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
            N+L   +D+  +  ISDFGL+K+  P    +++   G+ GY+APE       +   D +
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 599 SFGVVLLEIICCRSNF--EVNVSTADEVLLSTWVYN 632
           S GV+   ++C    F  E +    +++L + + ++
Sbjct: 203 SIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 16/147 (10%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSL-----ADLLFNLETRPLWRDRVRIALDVARGLLYLHD 528
           L Y  ++  KL L+ +F+  G L      +++F  E    +   + +ALD      +LH 
Sbjct: 91  LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD------HLHS 144
Query: 529 ECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS 588
              + II+ D+K  NIL+D+    K++DFGL+K  + ++    +   G+  YMAPE  N 
Sbjct: 145 ---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNR 200
Query: 589 GLITVKSDVYSFGVVLLEIICCRSNFE 615
              T  +D +SFGV++ E++     F+
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQ 227

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 140 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKIL 196
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +  +     D++S G ++ E++  R
Sbjct: 197 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNMTV---DIWSVGCIMAELLTGR 249
Query: 612 SNF 614
           + F
Sbjct: 250 TLF 252

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 19/156 (12%)
Query: 486 LVYEFMSKGSLADLL----FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKL 541
           L+ + +S G L D +    F  E     RD  R+   V   + YLHD   + I+H D+K 
Sbjct: 93  LIMQLVSGGELFDRIVEKGFYTE-----RDASRLIFQVLDAVKYLHD---LGIVHRDLKP 144
Query: 542 RNIL---IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
            N+L   +D+  +  ISDFGL+K+  P    +++   G+ GY+APE       +   D +
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 599 SFGVVLLEIICCRSNF--EVNVSTADEVLLSTWVYN 632
           S GV+   ++C    F  E +    +++L + + ++
Sbjct: 203 SIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 27/164 (16%)
Query: 447 DKRKLLTVLAGCLG-SITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLET 505
           D   L+ +L  CL  +I  +  L+    LL Y H     +        GS   LL N   
Sbjct: 98  DHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNI--------GS--QLLLN--- 144
Query: 506 RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP 565
              W       + +A+G++YL    E +++H D+  RN+L+      KI+DFGLA+LL  
Sbjct: 145 ---W------CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 192
Query: 566 NQTGIVA-GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
           ++    A G +    +MA E  +    T +SDV+S+GV + E++
Sbjct: 193 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELM 236

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 16/151 (10%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I+S +  ++ S++  L+  +   GSL D L      P     +R+A+  A GL +LH E 
Sbjct: 68  IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP--HLALRLAVSAACGLAHLHVEI 125
Query: 531 -----EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR---GSRGYMA 582
                +  I H D K RN+L+  + +  I+D GLA +       +  G     G++ YMA
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 583 PEWQNSGLIT------VKSDVYSFGVVLLEI 607
           PE  +  + T        +D+++FG+VL EI
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V EF+  G L   L +      W  ++R+ LD+A G+ Y+ ++    I+H D++  NI 
Sbjct: 98  MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIF 156
Query: 546 ---IDDSWR--AKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE--WQNSGLITVKSDVY 598
              +D++    AK++DF L++         V+G+ G+  +MAPE         T K+D Y
Sbjct: 157 LQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTY 212
Query: 599 SFGVVLLEIICCRSNFE 615
           SF ++L  I+     F+
Sbjct: 213 SFAMILYTILTGEGPFD 229

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +LV E++  G L D + +        D +     +  G+ ++H   ++ I+H D+K  NI
Sbjct: 162 VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENI 218
Query: 545 LI--DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           L    D+ + KI DFGLA+   P +   V    G+  ++APE  N   ++  +D++S GV
Sbjct: 219 LCVNRDAKQIKIIDFGLARRYKPREKLKVNF--GTPEFLAPEVVNYDFVSFPTDMWSVGV 276
Query: 603 VLLEIICCRSNF--EVNVSTADEVLLSTWVYNCFVAGEFNKLVEE 645
           +   ++   S F  + +  T + +L   W        EF  + EE
Sbjct: 277 IAYMLLSGLSPFLGDNDAETLNNILACRW---DLEDEEFQDISEE 318

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 12/192 (6%)
Query: 421 FIKWSSGQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHR 480
           F K   G+  L+ H++A  I N +   K + L V+      I  L        + +Y+  
Sbjct: 29  FGKVKVGKHELTGHKVAVKILNRQ---KIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI 85
Query: 481 S--SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCD 538
           S  S   +V E++S G L D +     R   ++  R+   +  G+ Y H      ++H D
Sbjct: 86  STPSDIFMVMEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRD 141
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT-VKSDV 597
           +K  N+L+D    AKI+DFGL+ ++   +   +    GS  Y APE  +  L    + D+
Sbjct: 142 LKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRXSCGSPNYAAPEVISGRLYAGPEVDI 199
Query: 598 YSFGVVLLEIIC 609
           +S GV+L  ++C
Sbjct: 200 WSSGVILYALLC 211

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 23/140 (16%)
Query: 486 LVYEFMSKGSLADLL-----------FNLETRP----LWRDRVRIALDVARGLLYLHDEC 530
           ++ E+ SKG+L + L           +++   P     ++D V     +ARG+ YL  + 
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ- 176
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQN 587
             + IH D+  RN+L+ ++   +I+DFGLA+ +  N           R    +MAPE   
Sbjct: 177 --KCIHRDLAARNVLVTENNVMRIADFGLARDI--NNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 588 SGLITVKSDVYSFGVVLLEI 607
             + T +SDV+SFGV++ EI
Sbjct: 233 DRVYTHQSDVWSFGVLMWEI 252

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 8/106 (7%)
Query: 514 RIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG 573
           +IA+ + + L +LH   ++ +IH D+K  N+LI+   + K  DFG++  L+ +    +  
Sbjct: 140 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 574 VRGSRGYMAPEWQNSGL----ITVKSDVYSFGVVLLEIICCRSNFE 615
             G + Y APE  N  L     +VKSD++S G+  +E+   R  ++
Sbjct: 198 --GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYD 241

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +++ EFM  G+L   L   + +      V +   +A G+ YL    E+  +H D+  RNI
Sbjct: 93  MILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNI 149
Query: 545 LIDDSWRAKISDFGLAKLLM-----PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
           L++ +   K+SDFGL++ L      P +T  + G    R + APE       T  SD +S
Sbjct: 150 LVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIR-WTAPEAIAFRKFTSASDAWS 208
Query: 600 FGVVLLEII 608
           +G+V+ E++
Sbjct: 209 YGIVMWEVM 217

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 24/144 (16%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLH------DECEVQIIHCD 538
           LLV E+   GSL   L +L T   W    R+A  V RGL YLH      D  +  I H D
Sbjct: 88  LLVMEYYPNGSLXKYL-SLHTSD-WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRD 145
Query: 539 IKLRNILIDDSWRAKISDFGLA------KLLMPNQTGIVA-GVRGSRGYMAPEWQNSGLI 591
           +  RN+L+ +     ISDFGL+      +L+ P +    A    G+  YMAPE    G +
Sbjct: 146 LNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVL-EGAV 204
Query: 592 TVKS--------DVYSFGVVLLEI 607
            ++         D+Y+ G++  EI
Sbjct: 205 NLRDXESALKQVDMYALGLIYWEI 228

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 134 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 191 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 223

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 130 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 186
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 187 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 219

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 149 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 205
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 206 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 238

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 504 ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL 563
           E +  ++D V     +ARG+ YL  +   + IH D+  RN+L+ ++   KI+DFGLA+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 564 MPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
             N           R    +MAPE     + T +SDV+SFGV++ EI
Sbjct: 208 --NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 118 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 207

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 128 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 217

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 504 ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL 563
           E +  ++D V     +ARG+ YL  +   + IH D+  RN+L+ ++   KI+DFGLA+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 564 MPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
             N           R    +MAPE     + T +SDV+SFGV++ EI
Sbjct: 208 --NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 125 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 214

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 125 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 214

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 158 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 214
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 215 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 247

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 216

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 85/214 (39%), Gaps = 45/214 (21%)
Query: 410 ATKDQYASAILFIKWSSGQANLSTHRIAPPIGNDKV--NDKRKLLTVLAGCLGSITFLCF 467
           AT   YA  IL       +  ++   +A  +   +V  N +   LT L     +   LCF
Sbjct: 28  ATGRYYAMKIL-----RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82
Query: 468 LIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGLLY 525
                              V E+ + G   +L F+L   R    +R R    ++   L Y
Sbjct: 83  -------------------VMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 526 LHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGY 580
           LH      +++ DIKL N+++D     KI+DFGL K       GI  G       G+  Y
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKTFCGTPEY 171
Query: 581 MAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +APE           D +  GVV+ E++C R  F
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 85/214 (39%), Gaps = 45/214 (21%)
Query: 410 ATKDQYASAILFIKWSSGQANLSTHRIAPPIGNDKV--NDKRKLLTVLAGCLGSITFLCF 467
           AT   YA  IL       +  ++   +A  +   +V  N +   LT L     +   LCF
Sbjct: 28  ATGRYYAMKIL-----RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82
Query: 468 LIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGLLY 525
                              V E+ + G   +L F+L   R    +R R    ++   L Y
Sbjct: 83  -------------------VMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 526 LHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGY 580
           LH      +++ DIKL N+++D     KI+DFGL K       GI  G       G+  Y
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKXFCGTPEY 171
Query: 581 MAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +APE           D +  GVV+ E++C R  F
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 20/150 (13%)
Query: 473 SLLVYKHRSSKKL-LVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGLLYLHDE 529
           + L Y  ++  +L  V E+ + G   +L F+L   R    +R R    ++   L YLH  
Sbjct: 68  TALKYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPE 584
               +++ DIKL N+++D     KI+DFGL K       GI  G       G+  Y+APE
Sbjct: 125 ---DVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKTFCGTPEYLAPE 175
Query: 585 WQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
                      D +  GVV+ E++C R  F
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 85/214 (39%), Gaps = 45/214 (21%)
Query: 410 ATKDQYASAILFIKWSSGQANLSTHRIAPPIGNDKV--NDKRKLLTVLAGCLGSITFLCF 467
           AT   YA  IL       +  ++   +A  +   +V  N +   LT L     +   LCF
Sbjct: 31  ATGRYYAMKIL-----RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 85
Query: 468 LIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGLLY 525
                              V E+ + G   +L F+L   R    +R R    ++   L Y
Sbjct: 86  -------------------VMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSALEY 123
Query: 526 LHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGY 580
           LH      +++ DIKL N+++D     KI+DFGL K       GI  G       G+  Y
Sbjct: 124 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKTFCGTPEY 174
Query: 581 MAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +APE           D +  GVV+ E++C R  F
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 85/214 (39%), Gaps = 45/214 (21%)
Query: 410 ATKDQYASAILFIKWSSGQANLSTHRIAPPIGNDKV--NDKRKLLTVLAGCLGSITFLCF 467
           AT   YA  IL       +  ++   +A  +   +V  N +   LT L     +   LCF
Sbjct: 28  ATGRYYAMKIL-----RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82
Query: 468 LIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGLLY 525
                              V E+ + G   +L F+L   R    +R R    ++   L Y
Sbjct: 83  -------------------VMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 526 LHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGY 580
           LH      +++ DIKL N+++D     KI+DFGL K       GI  G       G+  Y
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKXFCGTPEY 171
Query: 581 MAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +APE           D +  GVV+ E++C R  F
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 12/104 (11%)
Query: 514 RIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG 573
           +I L   + L +L +   ++IIH DIK  NIL+D S   K+ DFG++  L+ +    +A 
Sbjct: 129 KITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS----IAK 182
Query: 574 VR--GSRGYMAPEWQNSGL----ITVKSDVYSFGVVLLEIICCR 611
            R  G R YMAPE  +         V+SDV+S G+ L E+   R
Sbjct: 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 25/167 (14%)
Query: 522 GLLYLHDECEVQIIHCDIKLRNILI-----DDSWRAKISDFGLAKLLMPNQTGIV--AGV 574
           GL +LH    + I+H D+K  NILI         +A ISDFGL K L   +      +GV
Sbjct: 130 GLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 575 RGSRGYMAPEWQNSGL---ITVKSDVYSFGVVLLEIICCRSN-FEVNVSTADEVLLSTWV 630
            G+ G++APE  +       T   D++S G V   +I   S+ F  ++     +LL    
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACS 246
Query: 631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
            +C    +   ++  E+    +E+M+         +P  RPS K+V+
Sbjct: 247 LDCLHPEKHEDVIAREL----IEKMIAM-------DPQKRPSAKHVL 282

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 85/214 (39%), Gaps = 45/214 (21%)
Query: 410 ATKDQYASAILFIKWSSGQANLSTHRIAPPIGNDKV--NDKRKLLTVLAGCLGSITFLCF 467
           AT   YA  IL       +  ++   +A  +   +V  N +   LT L     +   LCF
Sbjct: 28  ATGRYYAMKIL-----RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82
Query: 468 LIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGLLY 525
                              V E+ + G   +L F+L   R    +R R    ++   L Y
Sbjct: 83  -------------------VMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 526 LHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGY 580
           LH      +++ DIKL N+++D     KI+DFGL K       GI  G       G+  Y
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKXFCGTPEY 171
Query: 581 MAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +APE           D +  GVV+ E++C R  F
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 20/148 (13%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNL-ETRPLWRDRVRI-ALDVARGLLYLHDECE 531
           L Y  ++  +L  V E+ + G   +L F+L   R    +R R    ++   L YLH    
Sbjct: 75  LKYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSALEYLHSR-- 129
Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQ 586
             +++ DIKL N+++D     KI+DFGL K       GI  G       G+  Y+APE  
Sbjct: 130 -DVVYRDIKLENLMLDKDGHIKITDFGLCK------EGISDGATMKXFCGTPEYLAPEVL 182
Query: 587 NSGLITVKSDVYSFGVVLLEIICCRSNF 614
                    D +  GVV+ E++C R  F
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLPF 210

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 21  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQ 80
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 136
Query: 545 LIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 197 VLTAMLA 203

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV E++  GSL D L            +  A  +  G+ YLH +     IH ++  RN+L
Sbjct: 95  LVMEYVPLGSLRDYLPRHSIG--LAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVL 149
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +D+    KI DFGLAK +            G     + APE          SDV+SFGV 
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 604 LLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE--EVDKITLE--RMVKT 658
           L E++  C S+        + + ++          E  +  E     DK   E   ++K 
Sbjct: 210 LYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKN 269
Query: 659 GLLCIQDEPNLRPSMKNVILMLEGTME 685
              C + E + RP+ +N+I +L+   E
Sbjct: 270 ---CWETEASFRPTFENLIPILKTVHE 293

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 23/211 (10%)
Query: 486 LVYEFMSKGSLADLL----FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKL 541
           LV E++  GSL D L      L    L+      A  +  G+ YLH +     IH  +  
Sbjct: 90  LVMEYVPLGSLRDYLPRHCVGLAQLLLF------AQQICEGMAYLHAQ---HYIHRALAA 140
Query: 542 RNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYS 599
           RN+L+D+    KI DFGLAK +            G     + APE          SDV+S
Sbjct: 141 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWS 200
Query: 600 FGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEF----NKLVEEEVDKITLER 654
           FGV L E++  C SN   +    + +  +          E      +L   +     +  
Sbjct: 201 FGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYH 260
Query: 655 MVKTGLLCIQDEPNLRPSMKNVILMLEGTME 685
           ++K    C + E + RP+ +N++ +L+   E
Sbjct: 261 LMKN---CWETEASFRPTFQNLVPILQTAQE 288

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           DFGLA+      TG VA    +R Y APE   N+       D++S G ++ E++  R+ F
Sbjct: 168 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLR 542
           +V E+++ GSL D++   ET     D  +IA    +  + L +LH     Q+IH DIK  
Sbjct: 94  VVMEYLAGGSLTDVV--TET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSD 145
Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           NIL+      K++DFG    + P Q+     V G+  +MAPE         K D++S G+
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 603 VLLEII 608
           + +E+I
Sbjct: 205 MAIEMI 210

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 20  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQ 79
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 135
Query: 545 LIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 196 VLTAMLA 202

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 21  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQ 80
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 136
Query: 545 LIDDSWRAKISDFGLAKLL-MPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 197 VLTAMLA 203

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 39/218 (17%)
Query: 485 LLVYEFMSKGSL--------ADLLFNLETRPLW-------RDRVRIALDVARGLLYLHDE 529
           ++V+E+M  G L         D +  ++ +P            + IA  +A G++YL  +
Sbjct: 93  IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ 152
Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPE 584
                +H D+  RN L+  +   KI DFG+++ +       V G     +R    +M PE
Sbjct: 153 ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR----WMPPE 205
Query: 585 WQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE 644
                  T +SDV+SFGV+L EI          +S       +T V  C   G       
Sbjct: 206 SIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS-------NTEVIECITQGRV----- 253
Query: 645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG 682
            E  ++  + +    L C Q EP  R ++K +  +L  
Sbjct: 254 LERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHA 291

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 63/115 (54%), Gaps = 16/115 (13%)
Query: 514 RIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG 573
           ++ + + + L YL ++  V  IH D+K  NIL+D+  + K+ DFG++  L+ ++    + 
Sbjct: 128 KMTVAIVKALYYLKEKHGV--IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 574 VRGSRGYMAPEWQNSGLIT-----VKSDVYSFGVVLLEIIC-------CRSNFEV 616
             G   YMAPE  +    T     +++DV+S G+ L+E+         C+++FEV
Sbjct: 186 --GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV 238

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 23/211 (10%)
Query: 486 LVYEFMSKGSLADLL----FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKL 541
           LV E++  GSL D L      L    L+      A  +  G+ YLH +     IH  +  
Sbjct: 89  LVMEYVPLGSLRDYLPRHCVGLAQLLLF------AQQICEGMAYLHAQ---HYIHRALAA 139
Query: 542 RNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYS 599
           RN+L+D+    KI DFGLAK +            G     + APE          SDV+S
Sbjct: 140 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWS 199
Query: 600 FGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEF----NKLVEEEVDKITLER 654
           FGV L E++  C SN   +    + +  +          E      +L   +     +  
Sbjct: 200 FGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYH 259
Query: 655 MVKTGLLCIQDEPNLRPSMKNVILMLEGTME 685
           ++K    C + E + RP+ +N++ +L+   E
Sbjct: 260 LMKN---CWETEASFRPTFQNLVPILQTAQE 287

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 20  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 135
Query: 545 LIDDSWRAKISDFGLAKLL-MPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 196 VLTAMLA 202

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 94/234 (40%), Gaps = 43/234 (18%)
Query: 468 LIAISSLLVYKHRSSKKLLVYEFMSKGSLADLL---------FNLETRPLWRDRVRIALD 518
           L+ +S     K R    +++  FM  G L   L         FNL  + L    VR  +D
Sbjct: 90  LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL----VRFMVD 145
Query: 519 VARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR 578
           +A G+ YL        IH D+  RN ++ +     ++DFGL++        I +G    +
Sbjct: 146 IACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSR-------KIYSGDYYRQ 195
Query: 579 G--------YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV 630
           G        ++A E     L TV SDV++FGV + EI+         +  A+       +
Sbjct: 196 GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE-------I 248
Query: 631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM 684
           YN  + G   K   E      +E +      C   +P  RPS   + + LE  +
Sbjct: 249 YNYLIGGNRLKQPPE-----CMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 8/189 (4%)
Query: 425 SSGQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKK 484
           ++G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    
Sbjct: 18  AAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN 77
Query: 485 L--LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR 542
           +  L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  
Sbjct: 78  IQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPE 133
Query: 543 NILIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSF 600
           N+L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S 
Sbjct: 134 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 601 GVVLLEIIC 609
           G+VL  ++ 
Sbjct: 194 GIVLTAMLA 202

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADL-LFNLETRPLWRDRVRIALDVARGLLYLHDECEVQI 534
           VY++ +S+ +L+ E+ + G +  L L  L       D +R+   +  G+ YLH      I
Sbjct: 97  VYEN-TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NI 152
Query: 535 IHCDIKLRNILIDDSW---RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLI 591
           +H D+K +NIL+   +     KI DFG+++ +       +  + G+  Y+APE  N   I
Sbjct: 153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHACELREIMGTPEYLAPEILNYDPI 210
Query: 592 TVKSDVYSFGVVLLEIICCRSNF 614
           T  +D+++ G++   ++   S F
Sbjct: 211 TTATDMWNIGIIAYMLLTHTSPF 233

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A G+ YL D    +++H D+  RN+L+      KI+DFGLAKLL   +    A G +
Sbjct: 121 VQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 178 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 210

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 20  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 135
Query: 545 LIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 196 VLTAMLA 202

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLR 542
           +V E+++ GSL D++   ET     D  +IA    +  + L +LH     Q+IH DIK  
Sbjct: 94  VVMEYLAGGSLTDVV--TET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSD 145
Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           NIL+      K++DFG    + P Q+     V G+  +MAPE         K D++S G+
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 603 VLLEII 608
           + +E+I
Sbjct: 205 MAIEMI 210

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLR 542
           +V E+++ GSL D++   ET     D  +IA    +  + L +LH     Q+IH DIK  
Sbjct: 94  VVMEYLAGGSLTDVV--TET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSD 145
Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           NIL+      K++DFG    + P Q+     V G+  +MAPE         K D++S G+
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 603 VLLEII 608
           + +E+I
Sbjct: 205 MAIEMI 210

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 13/134 (9%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALD----VARGLLYLHDECEVQIIHCDIKLRNI 544
           EF  KG+L   +       L  D+V +AL+    + +G+ Y+H +   ++I+ D+K  NI
Sbjct: 100 EFCDKGTLEQWIEKRRGEKL--DKV-LALELFEQITKGVDYIHSK---KLINRDLKPSNI 153
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
            + D+ + KI DFGL   L  +  G     +G+  YM+PE  +S     + D+Y+ G++L
Sbjct: 154 FLVDTKQVKIGDFGLVTSLKND--GKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLIL 211
Query: 605 LEII-CCRSNFEVN 617
            E++  C + FE +
Sbjct: 212 AELLHVCDTAFETS 225

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLR 542
           +V E+++ GSL D++   ET     D  +IA    +  + L +LH     Q+IH DIK  
Sbjct: 95  VVMEYLAGGSLTDVV--TET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSD 146
Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           NIL+      K++DFG    + P Q+     V G+  +MAPE         K D++S G+
Sbjct: 147 NILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 603 VLLEII 608
           + +E+I
Sbjct: 206 MAIEMI 211

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 15/207 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV E++  GSL D L            +  A  +  G+ YLH +     IH ++  RN+L
Sbjct: 95  LVMEYVPLGSLRDYLPRHSIG--LAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVL 149
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG--YMAPEWQNSGLITVKSDVYSFGVV 603
           +D+    KI DFGLAK +            G     + APE          SDV+SFGV 
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 604 LLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE--EVDKITLE--RMVKT 658
           L E++  C S+        + + ++          E  +  E     DK   E   ++K 
Sbjct: 210 LYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKN 269
Query: 659 GLLCIQDEPNLRPSMKNVILMLEGTME 685
              C + E + RP+ +N+I +L+   E
Sbjct: 270 ---CWETEASFRPTFENLIPILKTVHE 293

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 21  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 80
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 136
Query: 545 LIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 197 VLTAMLA 203

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 20  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 135
Query: 545 LIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 196 VLTAMLA 202

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 118 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 174
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 175 DFGLARHTADEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 227
Query: 612 SNF 614
           + F
Sbjct: 228 TLF 230

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 20  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 135
Query: 545 LIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 196 VLTAMLA 202

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 10/144 (6%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDR-VRIAL-DVARGLLYLHDECE 531
           L Y  ++  KL L+ +F+  G   DL   L    ++ +  V+  L ++A GL +LH    
Sbjct: 95  LHYAFQTEGKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAELALGLDHLH---S 148
Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLI 591
           + II+ D+K  NIL+D+    K++DFGL+K  + ++    +   G+  YMAPE  N    
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC-GTVEYMAPEVVNRQGH 207
Query: 592 TVKSDVYSFGVVLLEIICCRSNFE 615
           +  +D +S+GV++ E++     F+
Sbjct: 208 SHSADWWSYGVLMFEMLTGSLPFQ 231

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 118 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 174
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 175 DFGLARHTADEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 227
Query: 612 SNF 614
           + F
Sbjct: 228 TLF 230

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +++ EFM  G+L   L   + +      V +   +A G+ YL    E+  +H D+  RNI
Sbjct: 91  MILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNI 147
Query: 545 LIDDSWRAKISDFGLAKLLM-----PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
           L++ +   K+SDFGL++ L      P  T  + G    R + APE       T  SD +S
Sbjct: 148 LVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIR-WTAPEAIAFRKFTSASDAWS 206
Query: 600 FGVVLLEII 608
           +G+V+ E++
Sbjct: 207 YGIVMWEVM 215

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 486 LVYEFMSKGSL---ADLLFNLETRPLWRDRVRIALDVARGLL----YLHDECEVQIIHCD 538
           ++YE+M   S+    +  F L+        +++   + + +L    Y+H+E    I H D
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRD 177
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW--QNSGLITVKSD 596
           +K  NIL+D + R K+SDFG ++ ++  +   + G RG+  +M PE+    S     K D
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESEYMVDKK---IKGSRGTYEFMPPEFFSNESSYNGAKVD 234
Query: 597 VYSFGVVL 604
           ++S G+ L
Sbjct: 235 IWSLGICL 242

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 37/207 (17%)
Query: 489 EFMSKGSLADLL----FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           E+    +L DL+     N +    WR    +   +   L Y+H +    IIH D+K  NI
Sbjct: 95  EYCENRTLYDLIHSENLNQQRDEYWR----LFRQILEALSYIHSQG---IIHRDLKPMNI 147
Query: 545 LIDDSWRAKISDFGLAKLL-------------MPNQTGIVAGVRGSRGYMAPE-WQNSGL 590
            ID+S   KI DFGLAK +             +P  +  +    G+  Y+A E    +G 
Sbjct: 148 FIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGH 207
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI 650
              K D+YS G++  E+I   S     V+   ++          V+ EF    ++  +K+
Sbjct: 208 YNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKL--------RSVSIEFPPDFDD--NKM 257
Query: 651 TLERMVKTGLLCIQDEPNLRPSMKNVI 677
            +E+  K   L I  +PN RP  + ++
Sbjct: 258 KVEK--KIIRLLIDHDPNKRPGARTLL 282

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 118 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 174
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 175 DFGLARHTADEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 227
Query: 612 SNF 614
           + F
Sbjct: 228 TLF 230

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H S++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 70  ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 127
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +   +   +   A + G+  Y+ PE     +
Sbjct: 128 --KVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANT 210

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 122 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKIL 178
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 179 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 231
Query: 612 SNF 614
           + F
Sbjct: 232 TLF 234

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 32/189 (16%)
Query: 447 DKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETR 506
           DK   LT L  C  ++  L F                   V E+++ G   DL+++++  
Sbjct: 77  DKPPFLTQLHSCFQTVDRLYF-------------------VMEYVNGG---DLMYHIQQV 114
Query: 507 PLWRD--RVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLM 564
             +++   V  A +++ GL +LH      II+ D+KL N+++D     KI+DFG+ K  M
Sbjct: 115 GKFKEPQAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHM 171
Query: 565 PNQTGIVA-GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE 623
               G+      G+  Y+APE           D +++GV+L E++  +  F  +    DE
Sbjct: 172 --MDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF--DGEDEDE 227
Query: 624 VLLSTWVYN 632
           +  S   +N
Sbjct: 228 LFQSIMEHN 236

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+  +G +   L  L      R    I  ++A  L Y H + 
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT-ELANALSYCHSK- 132
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +   +   +     + G+  Y+ PE     +
Sbjct: 133 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPPEMIEGRM 187
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANT 215

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 116 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKIL 172
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 173 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 225
Query: 612 SNF 614
           + F
Sbjct: 226 TLF 228

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 20  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 135
Query: 545 LIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 196 VLTAMLA 202

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 116 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKIL 172
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 173 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 225
Query: 612 SNF 614
           + F
Sbjct: 226 TLF 228

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 21  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 80
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 136
Query: 545 LIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 197 VLTAMLA 203

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 21  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 80
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 136
Query: 545 LIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 197 VLTAMLA 203

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 21  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 80
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 136
Query: 545 LIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 197 VLTAMLA 203

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 21  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 80
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 136
Query: 545 LIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 197 VLTAMLA 203

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +LV E    G L   L          +   +   V+ G+ YL    E   +H D+  RN+
Sbjct: 85  MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNV 141
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS--RGYMAPEWQNSGLITVKSDVYSFGV 602
           L+ +   AKISDFGL+K L  + +   A   G     + APE  N    + +SDV+S+GV
Sbjct: 142 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV 201
Query: 603 VLLEII 608
            + E +
Sbjct: 202 TMWEAL 207

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRD-----RVRIALDVARGLLYLHDECEVQIIHCDIK 540
           +V E+   G LA ++        + D     RV   L +A    +   +    ++H D+K
Sbjct: 84  IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 541 LRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSF 600
             N+ +D     K+ DFGLA++L  + T       G+  YM+PE  N      KSD++S 
Sbjct: 144 PANVFLDGKQNVKLGDFGLARIL-NHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 601 GVVLLEI 607
           G +L E+
Sbjct: 203 GCLLYEL 209

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 20  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 135
Query: 545 LIDDSWRAKISDFGLAKLL-MPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 196 VLTAMLA 202

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALD-VARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+   GS++D++  L  + L  D +   L    +GL YLH    ++ IH DIK  NI
Sbjct: 101 IVMEYCGAGSVSDII-RLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNI 156
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L++    AK++DFG+A  L  +       V G+  +MAPE          +D++S G+  
Sbjct: 157 LLNTEGHAKLADFGVAGQLT-DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITA 215
Query: 605 LEI 607
           +E+
Sbjct: 216 IEM 218

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 20  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 135
Query: 545 LIDDSWRAKISDFGLAKLL-MPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 196 VLTAMLA 202

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 113 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKIL 169
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 170 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 222
Query: 612 SNF 614
           + F
Sbjct: 223 TLF 225

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLW--RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           LV + +S G L D +     R ++  +D   +   V   + YLH   E  I+H D+K  N
Sbjct: 83  LVMQLVSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPEN 136
Query: 544 ILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSF 600
           +L    +++ +  I+DFGL+K+    Q GI++   G+ GY+APE       +   D +S 
Sbjct: 137 LLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSI 193
Query: 601 GVVLLEIICCRSNF 614
           GV+   ++C    F
Sbjct: 194 GVITYILLCGYPPF 207

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 21  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 80
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 81  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 136
Query: 545 LIDDSWRAKISDFGLAKLL-MPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 196
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 197 VLTAMLA 203

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 123 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 179
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 180 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 232
Query: 612 SNF 614
           + F
Sbjct: 233 TLF 235

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 117 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKIL 173
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 174 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 226
Query: 612 SNF 614
           + F
Sbjct: 227 TLF 229

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 20  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 135
Query: 545 LIDDSWRAKISDFGLAKLL-MPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 196 VLTAMLA 202

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 21/154 (13%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRD--RVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
            V E+++ G   DL+++++    +++   V  A ++A GL +L  +    II+ D+KL N
Sbjct: 98  FVMEYVNGG---DLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDN 151
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLITVKSDVY 598
           +++D     KI+DFG+ K        I  GV      G+  Y+APE           D +
Sbjct: 152 VMLDSEGHIKIADFGMCK------ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWW 205
Query: 599 SFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYN 632
           +FGV+L E++  ++ FE      DE+  S   +N
Sbjct: 206 AFGVLLYEMLAGQAPFE--GEDEDELFQSIMEHN 237

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 20  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQ 79
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 135
Query: 545 LIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 196 VLTAMLA 202

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 117 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 173
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 174 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 226
Query: 612 SNF 614
           + F
Sbjct: 227 TLF 229

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE       +  SD+++ G ++ +++     F
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 130
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +   +   +   A + G+  Y+ PE     +
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRM 185
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANT 213

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 20  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 79
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 80  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 135
Query: 545 LIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 195
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 196 VLTAMLA 202

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 123 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 179
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 180 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 232
Query: 612 SNF 614
           + F
Sbjct: 233 TLF 235

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 113 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 169
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 170 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 222
Query: 612 SNF 614
           + F
Sbjct: 223 TLF 225

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 117 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 173
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 174 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 226
Query: 612 SNF 614
           + F
Sbjct: 227 TLF 229

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 123 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 179
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 180 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 232
Query: 612 SNF 614
           + F
Sbjct: 233 TLF 235

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 21/154 (13%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRD--RVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
            V E+++ G   DL+++++    +++   V  A ++A GL +L  +    II+ D+KL N
Sbjct: 419 FVMEYVNGG---DLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDN 472
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLITVKSDVY 598
           +++D     KI+DFG+ K        I  GV      G+  Y+APE           D +
Sbjct: 473 VMLDSEGHIKIADFGMCK------ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWW 526
Query: 599 SFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYN 632
           +FGV+L E++  ++ FE      DE+  S   +N
Sbjct: 527 AFGVLLYEMLAGQAPFE--GEDEDELFQSIMEHN 558

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+  +G +   L  L      R    I  ++A  L Y H + 
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT-ELANALSYCHSK- 132
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 133 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGRM 187
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANT 215

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 118 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 174
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 175 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 227
Query: 612 SNF 614
           + F
Sbjct: 228 TLF 230

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 427 GQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKL- 485
           G+  L+ +R+       K+ D ++ +         I     L   + +  Y HR    + 
Sbjct: 19  GEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQ 78
Query: 486 -LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L  E+ S G L D +      P   D  R    +  G++YLH    + I H DIK  N+
Sbjct: 79  YLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGITHRDIKPENL 134
Query: 545 LIDDSWRAKISDFGLAKLLM-PNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
           L+D+    KISDFGLA +    N+  ++  + G+  Y+APE  +         DV+S G+
Sbjct: 135 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGI 194
Query: 603 VLLEIIC 609
           VL  ++ 
Sbjct: 195 VLTAMLA 201

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +++YEFMS G L + + +   +    + V     V +GL ++H   E   +H D+K  NI
Sbjct: 230 VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENI 286
Query: 545 LI--DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +     S   K+ DFGL   L P Q+  V    G+  + APE      +   +D++S GV
Sbjct: 287 MFTTKRSNELKLIDFGLTAHLDPKQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 344
Query: 603 VLLEIICCRSNF 614
           +   ++   S F
Sbjct: 345 LSYILLSGLSPF 356

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 122 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 178
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 179 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 231
Query: 612 SNF 614
           + F
Sbjct: 232 TLF 234

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 31/197 (15%)
Query: 430 NLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYE 489
            ++  R++P    +     R+   +L    G    +  + +  S       SS   LV++
Sbjct: 128 EVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES-------SSFMFLVFD 180
Query: 490 FMSKGSLADLLFNL------ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
            M KG L D L         ETR + R        +   + +LH      I+H D+K  N
Sbjct: 181 LMRKGELFDYLTEKVALSEKETRSIMRS-------LLEAVSFLHAN---NIVHRDLKPEN 230
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKS------DV 597
           IL+DD+ + ++SDFG +  L P +   +  + G+ GY+APE     +           D+
Sbjct: 231 ILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDL 288
Query: 598 YSFGVVLLEIICCRSNF 614
           ++ GV+L  ++     F
Sbjct: 289 WACGVILFTLLAGSPPF 305

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 131 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 187
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 188 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 240
Query: 612 SNF 614
           + F
Sbjct: 241 TLF 243

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 130 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 186
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 187 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 239
Query: 612 SNF 614
           + F
Sbjct: 240 TLF 242

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 116 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 172
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 173 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 225
Query: 612 SNF 614
           + F
Sbjct: 226 TLF 228

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 117 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 173
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 174 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 226
Query: 612 SNF 614
           + F
Sbjct: 227 TLF 229

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 17/139 (12%)
Query: 511 DRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK-LLMPNQTG 569
           D V +   +A G+ YL       ++H D+  RN+L+ D    KISD GL + +   +   
Sbjct: 146 DFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK 202
Query: 570 IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII-------CCRSNFEVNVSTAD 622
           ++        +MAPE    G  ++ SD++S+GVVL E+        C  SN +V     +
Sbjct: 203 LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN 262
Query: 623 EVLL------STWVYNCFV 635
             +L        WVY   +
Sbjct: 263 RQVLPCPDDCPAWVYALMI 281

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 110 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 166
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 167 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 219
Query: 612 SNF 614
           + F
Sbjct: 220 TLF 222

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 130 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 186
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 187 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 239
Query: 612 SNF 614
           + F
Sbjct: 240 TLF 242

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +++YEFMS G L + + +   +    + V     V +GL ++H   E   +H D+K  NI
Sbjct: 124 VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENI 180
Query: 545 LI--DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +     S   K+ DFGL   L P Q+  V    G+  + APE      +   +D++S GV
Sbjct: 181 MFTTKRSNELKLIDFGLTAHLDPKQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 238
Query: 603 VLLEIICCRSNF 614
           +   ++   S F
Sbjct: 239 LSYILLSGLSPF 250

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 113 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 169
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 170 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 222
Query: 612 SNF 614
           + F
Sbjct: 223 TLF 225

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 121 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 177
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 178 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 230
Query: 612 SNF 614
           + F
Sbjct: 231 TLF 233

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 113 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 169
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 170 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 222
Query: 612 SNF 614
           + F
Sbjct: 223 TLF 225

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 131 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 187
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 188 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 240
Query: 612 SNF 614
           + F
Sbjct: 241 TLF 243

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR 575
           A +V   L YLH +    II+ D+K  NIL+D +   KI+DFG AK + P+ T  +    
Sbjct: 112 AAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVTYXLC--- 164
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           G+  Y+APE  ++       D +SFG+++ E++   + F
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 17/139 (12%)
Query: 511 DRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK-LLMPNQTG 569
           D V +   +A G+ YL       ++H D+  RN+L+ D    KISD GL + +   +   
Sbjct: 129 DFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK 185
Query: 570 IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII-------CCRSNFEVNVSTAD 622
           ++        +MAPE    G  ++ SD++S+GVVL E+        C  SN +V     +
Sbjct: 186 LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN 245
Query: 623 EVLL------STWVYNCFV 635
             +L        WVY   +
Sbjct: 246 RQVLPCPDDCPAWVYALMI 264

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DFGLARHTDDEMTGXVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 134 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 190
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 191 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 243
Query: 612 SNF 614
           + F
Sbjct: 244 TLF 246

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 109 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 165
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 166 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 218
Query: 612 SNF 614
           + F
Sbjct: 219 TLF 221

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 116 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 172
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 173 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 225
Query: 612 SNF 614
           + F
Sbjct: 226 TLF 228

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFG AKLL   +    A G +
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 107 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 163
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 164 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 216
Query: 612 SNF 614
           + F
Sbjct: 217 TLF 219

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 108 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 164
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 165 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 217
Query: 612 SNF 614
           + F
Sbjct: 218 TLF 220

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 107 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 163
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 164 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 216
Query: 612 SNF 614
           + F
Sbjct: 217 TLF 219

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFG AKLL   +    A G +
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 180
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFG AKLL   +    A G +
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFG AKLL   +    A G +
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 215

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 108 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 164
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 165 DFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 217
Query: 612 SNF 614
           + F
Sbjct: 218 TLF 220

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFG AKLL   +    A G +
Sbjct: 128 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 184
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 217

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 35/212 (16%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-------RIALDVARGLLYLHDECEVQIIHCD 538
           LV + +S GS+ D++ ++  +   +  V        I  +V  GL YLH   +   IH D
Sbjct: 90  LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRD 146
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR----GSRGYMAPE-WQNSGLITV 593
           +K  NIL+ +    +I+DFG++  L          VR    G+  +MAPE  +       
Sbjct: 147 VKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDF 206
Query: 594 KSDVYSFGVVLLEIICCRSNFE--------VNVSTADEVLLSTWVYNCFVAGEFNKLVEE 645
           K+D++SFG+  +E+    + +         +     D   L T V +  +  ++ K    
Sbjct: 207 KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK---- 262
Query: 646 EVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
                +  +M+    LC+Q +P  RP+   ++
Sbjct: 263 -----SFRKMIS---LCLQKDPEKRPTAAELL 286

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +A+G+ YL D    +++H D+  RN+L+      KI+DFG AKLL   +    A G +
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 187
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MA E     + T +SDV+S+GV + E++
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELM 220

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVA-RGLLYLHDECEVQIIHCDIKLRNILID 547
           E +  GSL  L+  +   P   DR    L  A  GL YLH     +I+H D+K  N+L+ 
Sbjct: 144 ELLEGGSLGQLIKQMGCLP--EDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLS 198
Query: 548 -DSWRAKISDFGLAKLLMPNQTG--IVAG--VRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
            D  RA + DFG A  L P+  G  ++ G  + G+  +MAPE         K D++S   
Sbjct: 199 SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCC 258
Query: 603 VLLEII 608
           ++L ++
Sbjct: 259 MMLHML 264

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVA-RGLLYLHDECEVQIIHCDIKLRNILID 547
           E +  GSL  L+  +   P   DR    L  A  GL YLH     +I+H D+K  N+L+ 
Sbjct: 130 ELLEGGSLGQLIKQMGCLP--EDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLS 184
Query: 548 -DSWRAKISDFGLAKLLMPNQTG--IVAG--VRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
            D  RA + DFG A  L P+  G  ++ G  + G+  +MAPE         K D++S   
Sbjct: 185 SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCC 244
Query: 603 VLLEII 608
           ++L ++
Sbjct: 245 MMLHML 250

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRD-----RVRIALDVARGLLYLHDECEVQIIHCDIK 540
           +V E+   G LA ++        + D     RV   L +A    +   +    ++H D+K
Sbjct: 84  IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 541 LRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSF 600
             N+ +D     K+ DFGLA++L  + T       G+  YM+PE  N      KSD++S 
Sbjct: 144 PANVFLDGKQNVKLGDFGLARIL-NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 601 GVVLLEI 607
           G +L E+
Sbjct: 203 GCLLYEL 209

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVA-RGLLYLHDECEVQIIHCDIKLRNILID 547
           E +  GSL  L+  +   P   DR    L  A  GL YLH     +I+H D+K  N+L+ 
Sbjct: 146 ELLEGGSLGQLIKQMGCLP--EDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLS 200
Query: 548 -DSWRAKISDFGLAKLLMPNQTG--IVAG--VRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
            D  RA + DFG A  L P+  G  ++ G  + G+  +MAPE         K D++S   
Sbjct: 201 SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCC 260
Query: 603 VLLEII 608
           ++L ++
Sbjct: 261 MMLHML 266

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 95/193 (49%), Gaps = 18/193 (9%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV +++  GSL D +         +  +   + +A+G+ YL +     ++H ++  RN+L
Sbjct: 91  LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVL 147
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIV-AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           +    + +++DFG+A LL P+   ++ +  +    +MA E  + G  T +SDV+S+GV +
Sbjct: 148 LKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTV 207
Query: 605 LEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLER-MVKTGLLCI 663
            E++   +     +  A+       V +    GE  +L + ++  I +   MVK    C 
Sbjct: 208 WELMTFGAEPYAGLRLAE-------VPDLLEKGE--RLAQPQICTIDVYMVMVK----CW 254
Query: 664 QDEPNLRPSMKNV 676
             + N+RP+ K +
Sbjct: 255 MIDENIRPTFKEL 267

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 127
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +   +   +   A + G+  Y+ PE     +
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANT 210

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 35/212 (16%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-------RIALDVARGLLYLHDECEVQIIHCD 538
           LV + +S GS+ D++ ++  +   +  V        I  +V  GL YLH   +   IH D
Sbjct: 85  LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRD 141
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR----GSRGYMAPE-WQNSGLITV 593
           +K  NIL+ +    +I+DFG++  L          VR    G+  +MAPE  +       
Sbjct: 142 VKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDF 201
Query: 594 KSDVYSFGVVLLEIICCRSNFE--------VNVSTADEVLLSTWVYNCFVAGEFNKLVEE 645
           K+D++SFG+  +E+    + +         +     D   L T V +  +  ++ K    
Sbjct: 202 KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK---- 257
Query: 646 EVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
                +  +M+    LC+Q +P  RP+   ++
Sbjct: 258 -----SFRKMIS---LCLQKDPEKRPTAAELL 281

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 69/127 (54%), Gaps = 14/127 (11%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALD-VARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ EF+  G+L D++  +    L  +++    + V + L YLH +    +IH DIK  +I
Sbjct: 119 VLMEFLQGGALTDIVSQVR---LNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSI 172
Query: 545 LIDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFG 601
           L+    R K+SDFG    +   +P +  +V    G+  +MAPE  +  L   + D++S G
Sbjct: 173 LLTLDGRVKLSDFGFCAQISKDVPKRKXLV----GTPYWMAPEVISRSLYATEVDIWSLG 228
Query: 602 VVLLEII 608
           ++++E++
Sbjct: 229 IMVIEMV 235

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 519 VARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR 578
           + RGL Y+H      IIH D+K  N+ +++    KI DFGLA+      TG VA    +R
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA----TR 182
Query: 579 GYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
            Y APE    W +        D++S G ++ E++  R+ F
Sbjct: 183 WYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLF 219

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 197 TAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 95/193 (49%), Gaps = 18/193 (9%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV +++  GSL D +         +  +   + +A+G+ YL +     ++H ++  RN+L
Sbjct: 109 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVL 165
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIV-AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           +    + +++DFG+A LL P+   ++ +  +    +MA E  + G  T +SDV+S+GV +
Sbjct: 166 LKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTV 225
Query: 605 LEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLER-MVKTGLLCI 663
            E++   +     +  A+       V +    GE  +L + ++  I +   MVK    C 
Sbjct: 226 WELMTFGAEPYAGLRLAE-------VPDLLEKGE--RLAQPQICTIDVYMVMVK----CW 272
Query: 664 QDEPNLRPSMKNV 676
             + N+RP+ K +
Sbjct: 273 MIDENIRPTFKEL 285

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 421 FIKWSSGQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHR 480
           F K   G+  L+ H++A  I N     K + L V+      I  L        + +Y+  
Sbjct: 24  FGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI 80
Query: 481 SSKK--LLVYEFMSKGSLADLLFN------LETRPLWRDRVRIALDVARGLLYLHDECEV 532
           S+     +V E++S G L D +        +E R L++ ++  A+D      Y H     
Sbjct: 81  STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ-QILSAVD------YCHRH--- 130
Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
            ++H D+K  N+L+D    AKI+DFGL+ ++   +   +    GS  Y APE  +  L  
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRDSCGSPNYAAPEVISGRLYA 188
Query: 593 -VKSDVYSFGVVLLEIICCRSNFE 615
             + D++S GV+L  ++C    F+
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFD 212

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 421 FIKWSSGQANLSTHRIAPPIGNDKVNDKRKLLTVLAGCLGSITFLCFLIAISSLLVYKHR 480
           F K   G+  L+ H++A  I N     K + L V+      I  L        + +Y+  
Sbjct: 24  FGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI 80
Query: 481 SSKK--LLVYEFMSKGSLADLLFN------LETRPLWRDRVRIALDVARGLLYLHDECEV 532
           S+     +V E++S G L D +        +E R L++ ++  A+D      Y H     
Sbjct: 81  STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ-QILSAVD------YCHRH--- 130
Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
            ++H D+K  N+L+D    AKI+DFGL+ ++   +   +    GS  Y APE  +  L  
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRTSCGSPNYAAPEVISGRLYA 188
Query: 593 -VKSDVYSFGVVLLEIICCRSNFE 615
             + D++S GV+L  ++C    F+
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFD 212

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLR 542
           +V E+++ GSL D++   ET     D  +IA    +  + L +LH     Q+IH +IK  
Sbjct: 95  VVMEYLAGGSLTDVV--TET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRNIKSD 146
Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           NIL+      K++DFG    + P Q+     V G+  +MAPE         K D++S G+
Sbjct: 147 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 603 VLLEII 608
           + +E+I
Sbjct: 206 MAIEMI 211

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +LV E    G L   L          +   +   V+ G+ YL    E   +H ++  RN+
Sbjct: 411 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNV 467
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS--RGYMAPEWQNSGLITVKSDVYSFGV 602
           L+ +   AKISDFGL+K L  + +   A   G     + APE  N    + +SDV+S+GV
Sbjct: 468 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV 527
Query: 603 VLLEII 608
            + E +
Sbjct: 528 TMWEAL 533

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 118 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++++ L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGL +      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DFGLCRHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 117 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 115 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 143 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 200 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ 533
           L Y  ++  KL L+ ++++ G   +L  +L  R  + +   + + V   +L L    ++ 
Sbjct: 124 LHYAFQTETKLHLILDYINGG---ELFTHLSQRERFTEH-EVQIYVGEIVLALEHLHKLG 179
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
           II+ DIKL NIL+D +    ++DFGL+K  + ++T       G+  YMAP+    G    
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGH 239
Query: 594 KS--DVYSFGVVLLEIICCRSNFEVN 617
               D +S GV++ E++   S F V+
Sbjct: 240 DKAVDWWSLGVLMYELLTGASPFTVD 265

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 485 LLVYEFMSKGSLADLLFNL------ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCD 538
            LV++ M KG L D L         ETR + R  + +       +  LH   ++ I+H D
Sbjct: 100 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV-------ICALH---KLNIVHRD 149
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW------QNSGLIT 592
           +K  NIL+DD    K++DFG +  L P +   +  V G+  Y+APE        N     
Sbjct: 150 LKPENILLDDDMNIKLTDFGFSCQLDPGEK--LRSVCGTPSYLAPEIIECSMNDNHPGYG 207
Query: 593 VKSDVYSFGVVLLEIICCRSNF 614
            + D++S GV++  ++     F
Sbjct: 208 KEVDMWSTGVIMYTLLAGSPPF 229

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 145 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           D+GLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DYGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 116 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVA-RGLLYLHDECEVQIIHCD 538
           R     LV E+   GS +DLL  +  +PL    +      A +GL YLH      +IH D
Sbjct: 125 REHTAWLVMEY-CLGSASDLL-EVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRD 179
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE---WQNSGLITVKS 595
           +K  NIL+ +    K+ DFG A ++ P    +     G+  +MAPE     + G    K 
Sbjct: 180 VKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDEGQYDGKV 234
Query: 596 DVYSFGVVLLEI 607
           DV+S G+  +E+
Sbjct: 235 DVWSLGITCIEL 246

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+       G VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DFGLARHTDDEMAGFVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRG 576
           ++   L YLH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G
Sbjct: 122 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
           +  Y++PE          SD+++ G ++ +++     F
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+       G VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DFGLARHTDDEMAGFVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 518 DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS 577
           D    L +LH +    ++H D+K  NI +    R K+ DFGL   L     G V    G 
Sbjct: 165 DTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ--EGD 219
Query: 578 RGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC 609
             YMAPE    G     +DV+S G+ +LE+ C
Sbjct: 220 PRYMAPELLQ-GSYGTAADVFSLGLTILEVAC 250

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 107 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 163
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+       G VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 164 DFGLARHTDDEMAGFVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 216
Query: 612 SNF 614
           + F
Sbjct: 217 TLF 219

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 96  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 153
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 154 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGRM 208
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANT 236

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 485 LLVYEFMSKGSLADLLFNL------ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCD 538
            LV++ M KG L D L         ETR + R  + +       +  LH   ++ I+H D
Sbjct: 100 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV-------ICALH---KLNIVHRD 149
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW------QNSGLIT 592
           +K  NIL+DD    K++DFG +  L P +   +  V G+  Y+APE        N     
Sbjct: 150 LKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYG 207
Query: 593 VKSDVYSFGVVLLEIICCRSNF 614
            + D++S GV++  ++     F
Sbjct: 208 KEVDMWSTGVIMYTLLAGSPPF 229

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 134 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 190
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+       G VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 191 DFGLARHTDDEMXGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 243
Query: 612 SNF 614
           + F
Sbjct: 244 TLF 246

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 14/144 (9%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK--LLMPNQTGIVAG 573
           A ++  GL +LH +    I++ D+KL NIL+D     KI+DFG+ K  +L   +T     
Sbjct: 124 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC- 179
Query: 574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNC 633
             G+  Y+APE           D +SFGV+L E++  +S F  +    +E+  S  + N 
Sbjct: 180 --GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF--HGQDEEELFHSIRMDNP 235
Query: 634 FVAGEFNKLVEEEVDKITLERMVK 657
           F    + + +E+E   + ++  V+
Sbjct: 236 F----YPRWLEKEAKDLLVKLFVR 255

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 20/138 (14%)
Query: 486 LVYEFMSKGSLADLL--FNLETRPLWRDRVRIALDVARGLLYLHDEC-----EVQIIHCD 538
           L+ ++   GSL D L    L+ + +    +++A     GL +LH E      +  I H D
Sbjct: 112 LITDYHENGSLYDYLKSTTLDAKSM----LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRD 167
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMP--NQTGIVAGVR-GSRGYMAPEWQNSGL----- 590
           +K +NIL+  +    I+D GLA   +   N+  I    R G++ YM PE  +  L     
Sbjct: 168 LKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHF 227
Query: 591 -ITVKSDVYSFGVVLLEI 607
              + +D+YSFG++L E+
Sbjct: 228 QSYIMADMYSFGLILWEV 245

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 485 LLVYEFMSKGSLADLLFNL------ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCD 538
            LV++ M KG L D L         ETR + R  + +       +  LH   ++ I+H D
Sbjct: 87  FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV-------ICALH---KLNIVHRD 136
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW------QNSGLIT 592
           +K  NIL+DD    K++DFG +  L P +   +  V G+  Y+APE        N     
Sbjct: 137 LKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYG 194
Query: 593 VKSDVYSFGVVLLEIICCRSNF 614
            + D++S GV++  ++     F
Sbjct: 195 KEVDMWSTGVIMYTLLAGSPPF 216

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 87  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 144
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 145 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGRM 199
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPFEANT 227

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 37/207 (17%)
Query: 489 EFMSKGSLADLL----FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           E+    +L DL+     N +    WR    +   +   L Y+H +    IIH ++K  NI
Sbjct: 95  EYCENRTLYDLIHSENLNQQRDEYWR----LFRQILEALSYIHSQG---IIHRNLKPXNI 147
Query: 545 LIDDSWRAKISDFGLAKLL-------------MPNQTGIVAGVRGSRGYMAPE-WQNSGL 590
            ID+S   KI DFGLAK +             +P  +  +    G+  Y+A E    +G 
Sbjct: 148 FIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGH 207
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI 650
              K D YS G++  E I   S     V+   ++          V+ EF    ++   K+
Sbjct: 208 YNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKL--------RSVSIEFPPDFDDNKXKV 259
Query: 651 TLERMVKTGLLCIQDEPNLRPSMKNVI 677
             +++++   L I  +PN RP  + ++
Sbjct: 260 E-KKIIR---LLIDHDPNKRPGARTLL 282

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 71  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 128
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 129 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC---GTLDYLPPEMIEGRM 183
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANT 211

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 132
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 133 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGRM 187
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANT 215

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 71  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 128
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   ++   G+  Y+ PE     +
Sbjct: 129 --RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS---GTLDYLPPEMIEGRM 183
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANT 211

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 127
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGRM 182
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANT 210

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++++   +L+ E ++ G L D L   E+     +       +  G+ YLH    +QI 
Sbjct: 81  VYENKTDV-ILILELVAGGELFDFLAEKESL-TEEEATEFLKQILNGVYYLHS---LQIA 135
Query: 536 HCDIKLRNILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D      R KI DFGLA K+   N+      + G+  ++APE  N   
Sbjct: 136 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEP 192
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 193 LGLEADMWSIGVITYILLSGASPF 216

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 131 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 187
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DFGLA+       G VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 188 DFGLARHTDDEMXGXVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 240
Query: 612 SNF 614
           + F
Sbjct: 241 TLF 243

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 130
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGRM 185
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANT 213

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVA-RGLLYLHDECEVQIIHCD 538
           R     LV E+   GS +DLL  +  +PL    +      A +GL YLH      +IH D
Sbjct: 86  REHTAWLVMEY-CLGSASDLL-EVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRD 140
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE---WQNSGLITVKS 595
           +K  NIL+ +    K+ DFG A ++ P    +     G+  +MAPE     + G    K 
Sbjct: 141 VKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDEGQYDGKV 195
Query: 596 DVYSFGVVLLEI 607
           DV+S G+  +E+
Sbjct: 196 DVWSLGITCIEL 207

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++++   +L+ E ++ G L D L   E+     +       +  G+ YLH    +QI 
Sbjct: 81  VYENKTDV-ILILELVAGGELFDFLAEKESL-TEEEATEFLKQILNGVYYLHS---LQIA 135
Query: 536 HCDIKLRNILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D      R KI DFGLA K+   N+      + G+  ++APE  N   
Sbjct: 136 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEP 192
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 193 LGLEADMWSIGVITYILLSGASPF 216

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
           ++H D+K  N+ +D     K+ DFGLA++L  ++      V G+  YM+PE  N      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNRMSYNE 195
Query: 594 KSDVYSFGVVLLEI 607
           KSD++S G +L E+
Sbjct: 196 KSDIWSLGCLLYEL 209

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++++   +L+ E ++ G L D L   E+     +       +  G+ YLH    +QI 
Sbjct: 82  VYENKTDV-ILILELVAGGELFDFLAEKESL-TEEEATEFLKQILNGVYYLHS---LQIA 136
Query: 536 HCDIKLRNILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D      R KI DFGLA K+   N+      + G+  ++APE  N   
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEP 193
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++++   +L+ E ++ G L D L   E+     +       +  G+ YLH    +QI 
Sbjct: 82  VYENKTDV-ILILELVAGGELFDFLAEKESL-TEEEATEFLKQILNGVYYLHS---LQIA 136
Query: 536 HCDIKLRNILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D      R KI DFGLA K+   N+      + G+  ++APE  N   
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEP 193
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++++   +L+ E ++ G L D L   E+     +       +  G+ YLH    +QI 
Sbjct: 82  VYENKTDV-ILILELVAGGELFDFLAEKESL-TEEEATEFLKQILNGVYYLHS---LQIA 136
Query: 536 HCDIKLRNILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D      R KI DFGLA K+   N+      + G+  ++APE  N   
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEP 193
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++++   +L+ E ++ G L D L   E+     +       +  G+ YLH    +QI 
Sbjct: 82  VYENKTDV-ILILELVAGGELFDFLAEKESL-TEEEATEFLKQILNGVYYLHS---LQIA 136
Query: 536 HCDIKLRNILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D      R KI DFGLA K+   N+      + G+  ++APE  N   
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEP 193
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +L+ EF+S G L D +   + +    + +        GL ++H   E  I+H DIK  NI
Sbjct: 124 VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENI 180
Query: 545 LID--DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           + +   +   KI DFGLA  L P++  IV     +  + APE  +   +   +D+++ GV
Sbjct: 181 MCETKKASSVKIIDFGLATKLNPDE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGV 238
Query: 603 VLLEIICCRSNF--EVNVSTADEVLLSTWVYN 632
           +   ++   S F  E ++ T   V    W ++
Sbjct: 239 LGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 270

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++++   +L+ E ++ G L D L   E+     +       +  G+ YLH    +QI 
Sbjct: 82  VYENKTDV-ILILELVAGGELFDFLAEKESL-TEEEATEFLKQILNGVYYLHS---LQIA 136
Query: 536 HCDIKLRNILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D      R KI DFGLA K+   N+      + G+  ++APE  N   
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEP 193
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++++   +L+ E ++ G L D L   E+     +       +  G+ YLH    +QI 
Sbjct: 82  VYENKTDV-ILILELVAGGELFDFLAEKESL-TEEEATEFLKQILNGVYYLHS---LQIA 136
Query: 536 HCDIKLRNILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D      R KI DFGLA K+   N+      + G+  ++APE  N   
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEP 193
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
Query: 472 SSLLVYKHRSSKKLLVY--------------EFMSKGSLADLLFNLETRPLWRDRVRIAL 517
             + ++KH   K ++ Y              E +  GSL+ LL + +  PL  +   I  
Sbjct: 68  EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS-KWGPLKDNEQTIGF 126
Query: 518 ---DVARGLLYLHDECEVQIIHCDIKLRNILIDD-SWRAKISDFGLAKLLMPNQTGI--- 570
               +  GL YLHD    QI+H DIK  N+LI+  S   KISDFG +K L     GI   
Sbjct: 127 YTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL----AGINPC 179
Query: 571 VAGVRGSRGYMAPEWQNSGL--ITVKSDVYSFGVVLLEIICCRSNF 614
                G+  YMAPE  + G       +D++S G  ++E+   +  F
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++++   +L+ E ++ G L D L   E+     +       +  G+ YLH    +QI 
Sbjct: 82  VYENKTDV-ILILELVAGGELFDFLAEKESL-TEEEATEFLKQILNGVYYLHS---LQIA 136
Query: 536 HCDIKLRNILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D      R KI DFGLA K+   N+      + G+  ++APE  N   
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEP 193
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 72  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 129
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 130 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC---GTLDYLPPEMIEGRM 184
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANT 212

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 131
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 132 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGRM 186
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPFEANT 214

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 132
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +   +   +     + G+  Y+ PE     +
Sbjct: 133 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 187
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANT 215

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++++   +L+ E ++ G L D L   E+     +       +  G+ YLH    +QI 
Sbjct: 82  VYENKTDV-ILILELVAGGELFDFLAEKESLT-EEEATEFLKQILNGVYYLHS---LQIA 136
Query: 536 HCDIKLRNILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D      R KI DFGLA K+   N+      + G+  ++APE  N   
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPAFVAPEIVNYEP 193
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 71  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 128
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +   +   +     + G+  Y+ PE     +
Sbjct: 129 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 183
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANT 211

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 127
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +   +   +     + G+  Y+ PE     +
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANT 210

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 96  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 153
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 154 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC---GTLDYLPPEMIEGRM 208
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANT 236

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++++   +L+ E ++ G L D L   E+     +       +  G+ YLH    +QI 
Sbjct: 82  VYENKTDV-ILILELVAGGELFDFLAEKESL-TEEEATEFLKQILNGVYYLHS---LQIA 136
Query: 536 HCDIKLRNILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D      R KI DFGLA K+   N+      + G+  ++APE  N   
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEP 193
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 127
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +   +   +     + G+  Y+ PE     +
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYLPPEMIEGRM 182
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANT 210

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 69  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 126
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 127 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGRM 181
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEANT 209

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 127
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC---GTLDYLPPEMIEGRM 182
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANT 210

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 14/144 (9%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR 575
           A ++  GL +LH +    I++ D+KL NIL+D     KI+DFG+ K    N  G      
Sbjct: 125 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNE 178
Query: 576 --GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNC 633
             G+  Y+APE           D +SFGV+L E++  +S F  +    +E+  S  + N 
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF--HGQDEEELFHSIRMDNP 236
Query: 634 FVAGEFNKLVEEEVDKITLERMVK 657
           F    + + +E+E   + ++  V+
Sbjct: 237 F----YPRWLEKEAKDLLVKLFVR 256

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 127
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +   +   +     + G+  Y+ PE     +
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANT 210

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
Query: 472 SSLLVYKHRSSKKLLVY--------------EFMSKGSLADLLFNLETRPLWRDRVRIAL 517
             + ++KH   K ++ Y              E +  GSL+ LL + +  PL  +   I  
Sbjct: 54  EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS-KWGPLKDNEQTIGF 112
Query: 518 ---DVARGLLYLHDECEVQIIHCDIKLRNILIDD-SWRAKISDFGLAKLLMPNQTGI--- 570
               +  GL YLHD    QI+H DIK  N+LI+  S   KISDFG +K L     GI   
Sbjct: 113 YTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL----AGINPC 165
Query: 571 VAGVRGSRGYMAPEWQNSGL--ITVKSDVYSFGVVLLEIICCRSNF 614
                G+  YMAPE  + G       +D++S G  ++E+   +  F
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++++   +L+ E ++ G L D L   E+     +       +  G+ YLH    +QI 
Sbjct: 82  VYENKTDV-ILILELVAGGELFDFLAEKESL-TEEEATEFLKQILNGVYYLHS---LQIA 136
Query: 536 HCDIKLRNILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D      R KI DFGLA K+   N+      + G+  ++APE  N   
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEP 193
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           +I+H D+K  N+L+DD+   KI+DFGL+ ++       +    GS  Y APE  N  L  
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 593 -VKSDVYSFGVVLLEIICCRSNFE 615
             + DV+S G+VL  ++  R  F+
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFD 209

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 127
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC---GTLDYLPPEMIEGRM 182
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANT 210

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 130
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGRM 185
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANT 213

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 67  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 124
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 125 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGRM 179
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFEANT 207

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++++   +L+ E ++ G L D L   E+     +       +  G+ YLH    +QI 
Sbjct: 82  VYENKTDV-ILIGELVAGGELFDFLAEKESL-TEEEATEFLKQILNGVYYLHS---LQIA 136
Query: 536 HCDIKLRNILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D      R KI DFGLA K+   N+      + G+  ++APE  N   
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEP 193
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR----- 575
           +G+ YLH+    ++IH D+KL N+ ++D    KI DFGLA  +         G R     
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE------FDGERKKTLC 203
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFV 635
           G+  Y+APE       + + D++S G +L  ++  +  FE +      + +    Y+  V
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS--V 261
Query: 636 AGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
               N      V    + RM       +  +P LRPS+  ++
Sbjct: 262 PRHIN-----PVASALIRRM-------LHADPTLRPSVAELL 291

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V EF+  G+L D++ +  TR        + L V + L  LH +    +IH DIK  +IL
Sbjct: 225 VVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSIL 279
Query: 546 IDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +    R K+SDFG    +   +P +  +V    G+  +MAPE  +      + D++S G+
Sbjct: 280 LTHDGRVKLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPYGPEVDIWSLGI 335
Query: 603 VLLEII 608
           +++E++
Sbjct: 336 MVIEMV 341

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR----- 575
           +G+ YLH+    ++IH D+KL N+ ++D    KI DFGLA  +         G R     
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE------FDGERKKXLC 203
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFV 635
           G+  Y+APE       + + D++S G +L  ++  +  FE +      + +    Y+  V
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS--V 261
Query: 636 AGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
               N      V    + RM       +  +P LRPS+  ++
Sbjct: 262 PRHIN-----PVASALIRRM-------LHADPTLRPSVAELL 291

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA-KLLMPNQTGIVAGVRGSRG 579
           +G+ YLH+    ++IH D+KL N+ ++D    KI DFGLA K+    +      + G+  
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KDLCGTPN 207
Query: 580 YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEF 639
           Y+APE       + + D++S G +L  ++  +  FE +      + +    Y+  V    
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS--VPRHI 265
Query: 640 NKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
           N      V    + RM       +  +P LRPS+  ++
Sbjct: 266 N-----PVASALIRRM-------LHADPTLRPSVAELL 291

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 130
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC---GTLDYLPPEMIEGRM 185
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANT 213

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVR 575
           + +   L ++HD    +I+H DIK +NI +      ++ DFG+A++L  N T  +A    
Sbjct: 132 VQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACI 186
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEV 616
           G+  Y++PE   +     KSD+++ G VL E+   +  FE 
Sbjct: 187 GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V EF+  G+L D++ +  TR        + L V + L  LH +    +IH DIK  +IL
Sbjct: 98  VVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSIL 152
Query: 546 IDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +    R K+SDFG    +   +P +  +V    G+  +MAPE  +      + D++S G+
Sbjct: 153 LTHDGRVKLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPYGPEVDIWSLGI 208
Query: 603 VLLEII 608
           +++E++
Sbjct: 209 MVIEMV 214

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V EF+  G+L D++ +  TR        + L V + L  LH +    +IH DIK  +IL
Sbjct: 148 VVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSIL 202
Query: 546 IDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +    R K+SDFG    +   +P +  +V    G+  +MAPE  +      + D++S G+
Sbjct: 203 LTHDGRVKLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPYGPEVDIWSLGI 258
Query: 603 VLLEII 608
           +++E++
Sbjct: 259 MVIEMV 264

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 130
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC---GTLDYLPPEMIEGRM 185
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANT 213

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V EF+  G+L D++ +  TR        + L V + L  LH +    +IH DIK  +IL
Sbjct: 94  VVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSIL 148
Query: 546 IDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +    R K+SDFG    +   +P +  +V    G+  +MAPE  +      + D++S G+
Sbjct: 149 LTHDGRVKLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPYGPEVDIWSLGI 204
Query: 603 VLLEII 608
           +++E++
Sbjct: 205 MVIEMV 210

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V EF+  G+L D++ +  TR        + L V + L  LH +    +IH DIK  +IL
Sbjct: 103 VVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSIL 157
Query: 546 IDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +    R K+SDFG    +   +P +  +V    G+  +MAPE  +      + D++S G+
Sbjct: 158 LTHDGRVKLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPYGPEVDIWSLGI 213
Query: 603 VLLEII 608
           +++E++
Sbjct: 214 MVIEMV 219

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
            FGLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 GFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V EF+  G+L D++ +  TR        + L V + L  LH +    +IH DIK  +IL
Sbjct: 105 VVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSIL 159
Query: 546 IDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +    R K+SDFG    +   +P +  +V    G+  +MAPE  +      + D++S G+
Sbjct: 160 LTHDGRVKLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPYGPEVDIWSLGI 215
Query: 603 VLLEII 608
           +++E++
Sbjct: 216 MVIEMV 221

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++++   +L+ E ++ G L D L   E+     +       +  G+ YLH    +QI 
Sbjct: 82  VYENKTDV-ILILELVAGGELFDFLAEKESLT-EEEATEFLKQILNGVYYLHS---LQIA 136
Query: 536 HCDIKLRNILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D      R KI DFGLA K+   N+      + G+  ++APE  N   
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEP 193
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGY 580
           RGL Y+H      IIH D+K  N+ +++    +I DFGLA+      TG VA    +R Y
Sbjct: 142 RGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVA----TRWY 194
Query: 581 MAPE----WQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
            APE    W +        D++S G ++ E++  ++ F
Sbjct: 195 RAPEIMLNWMHYNQTV---DIWSVGCIMAELLQGKALF 229

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA-KLLMPNQTGIVAGVRGSRG 579
           +G+ YLH+    ++IH D+KL N+ ++D    KI DFGLA K+    +      + G+  
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KDLCGTPN 191
Query: 580 YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEF 639
           Y+APE       + + D++S G +L  ++  +  FE +      + +    Y+  V    
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS--VPRHI 249
Query: 640 NKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
           N      V    + RM       +  +P LRPS+  ++
Sbjct: 250 N-----PVASALIRRM-------LHADPTLRPSVAELL 275

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 505 TRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL 563
           ++PL  + VR  L  + RGL Y+H     Q+IH D+K  N+L++++   KI DFG+A+ L
Sbjct: 152 SQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208
Query: 564 ----MPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNF 614
                 +Q  +   V  +R Y APE   S    T   D++S G +  E++  R  F
Sbjct: 209 CTSPAEHQYFMTEYV-ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           D GLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DAGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGY 580
           RGL Y+H      IIH D+K  N+ +++    +I DFGLA+      TG VA    +R Y
Sbjct: 142 RGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVA----TRWY 194
Query: 581 MAPE----WQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
            APE    W +        D++S G ++ E++  ++ F
Sbjct: 195 RAPEIMLNWMHYNQTV---DIWSVGCIMAELLQGKALF 229

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 132
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE      
Sbjct: 133 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEXIEGRX 187
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANT 215

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 505 TRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL 563
           ++PL  + VR  L  + RGL Y+H     Q+IH D+K  N+L++++   KI DFG+A+ L
Sbjct: 153 SQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGL 209
Query: 564 ---MPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNF 614
                     +     +R Y APE   S    T   D++S G +  E++  R  F
Sbjct: 210 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           +I+H D+K  N+L+D+    KI+DFGL+ ++       +    GS  Y APE  +  L  
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 593 -VKSDVYSFGVVLLEIICCRSNFE 615
             + DV+S GV+L  ++C R  F+
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFD 204

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           V  +L + + + YL     +  +H DI +RNIL+      K+ DFGL++ +        +
Sbjct: 112 VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 168
Query: 573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
             R    +M+PE  N    T  SDV+ F V + EI+
Sbjct: 169 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEIL 204

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           DF LA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DFYLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           +I+H D+K  N+L+D+    KI+DFGL+ ++       +    GS  Y APE  +  L  
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKLYA 184
Query: 593 -VKSDVYSFGVVLLEIICCRSNFE 615
             + DV+S GV+L  ++C R  F+
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFD 208

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 515 IALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGV 574
           IA  VA G+ YL    E + +H D+  RN L+ ++   KI+DFGL++ +         G 
Sbjct: 179 IARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGN 235
Query: 575 RG-SRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
                 +M PE       T +SDV+++GVVL EI 
Sbjct: 236 DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGY 580
           RGL Y+H      IIH D+K  N+ +++    +I DFGLA+      TG VA    +R Y
Sbjct: 134 RGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVA----TRWY 186
Query: 581 MAPE----WQNSGLITVKSDVYSFGVVLLEIICCRSNF 614
            APE    W +        D++S G ++ E++  ++ F
Sbjct: 187 RAPEIMLNWMHYNQTV---DIWSVGCIMAELLQGKALF 221

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           V  +L + + + YL     +  +H DI +RNIL+      K+ DFGL++ +        +
Sbjct: 128 VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 184
Query: 573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
             R    +M+PE  N    T  SDV+ F V + EI+
Sbjct: 185 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEIL 220

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           +I+H D+K  N+L+D+    KI+DFGL+ ++       +    GS  Y APE  +  L  
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKLYA 189
Query: 593 -VKSDVYSFGVVLLEIICCRSNFE 615
             + DV+S GV+L  ++C R  F+
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFD 213

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           V  +L + + + YL     +  +H DI +RNIL+      K+ DFGL++ +        +
Sbjct: 116 VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 172
Query: 573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
             R    +M+PE  N    T  SDV+ F V + EI+
Sbjct: 173 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEIL 208

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           D GLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DRGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           +I+H D+K  N+L+D+    KI+DFGL+ ++       +    GS  Y APE  +  L  
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKLYA 190
Query: 593 -VKSDVYSFGVVLLEIICCRSNFE 615
             + DV+S GV+L  ++C R  F+
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFD 214

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 487 VYEFMSKGSLADLLFNLETRPLWRDRVRI---ALDVARGLLYLHDECEVQIIHCDIKLRN 543
           V+  M   +L +L   L+ R    D   +   A  ++  L YL  +   + +H DI  RN
Sbjct: 85  VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARN 141
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           +L+  +   K+ DFGL++ +  +     +  +    +MAPE  N    T  SDV+ FGV 
Sbjct: 142 VLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 201
Query: 604 LLEII 608
           + EI+
Sbjct: 202 MWEIL 206

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 497 ADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS 555
           ADL   ++ + L  D V+  +  + RGL Y+H      IIH D+K  N+ +++    KI 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSFGVVLLEIICCR 611
           D GLA+      TG VA    +R Y APE    W +        D++S G ++ E++  R
Sbjct: 168 DGGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGR 220
Query: 612 SNF 614
           + F
Sbjct: 221 TLF 223

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 467 FLIAISSLLVYKHRSSKKL----------LVYEFMSKGSLADLLFNLETRPLWRDRVRIA 516
           F+  ++++    HR+  +L          +V E    GSL D L   +   L     R A
Sbjct: 62  FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 121
Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIV--AGV 574
           + VA G+ YL  +   + IH D+  RN+L+      KI DFGL + L  N    V     
Sbjct: 122 VQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 178
Query: 575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
           +    + APE   +   +  SD + FGV L E+
Sbjct: 179 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 211

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E    GSL D L   +   L     R A+ VA G+ YL  +   + IH D+  RN+L
Sbjct: 97  MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLL 153
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIV--AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           +      KI DFGL + L  N    V     +    + APE   +   +  SD + FGV 
Sbjct: 154 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 213
Query: 604 LLEII 608
           L E+ 
Sbjct: 214 LWEMF 218

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E    GSL D L   +   L     R A+ VA G+ YL  +   + IH D+  RN+L
Sbjct: 97  MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLL 153
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIV--AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           +      KI DFGL + L  N    V     +    + APE   +   +  SD + FGV 
Sbjct: 154 LATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 213
Query: 604 LLEII 608
           L E+ 
Sbjct: 214 LWEMF 218

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV  FM      DL   ++   L  DR++ +   + +GL Y+H      IIH D+K  N+
Sbjct: 107 LVMPFMG----TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNL 159
Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSF 600
            +++    KI DFGLA+       G V     +R Y APE    W      T   D++S 
Sbjct: 160 AVNEDCELKILDFGLARQADSEMXGXVV----TRWYRAPEVILNWMR---YTQTVDIWSV 212
Query: 601 GVVLLEIICCRSNFE 615
           G ++ E+I  ++ F+
Sbjct: 213 GCIMAEMITGKTLFK 227

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 72  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 129
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI++FG +     ++   +    G+  Y+ PE     +
Sbjct: 130 --RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGRM 184
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANT 212

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 25/147 (17%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW-QNSGLI 591
           ++H DIK  NILID     AK+ DFG   LL            G+R Y  PEW       
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDFDGTRVYSPPEWISRHQYH 216
Query: 592 TVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            + + V+S G++L +++C    FE +     E+L +   +   V+ +   L+        
Sbjct: 217 ALPATVWSLGILLYDMVCGDIPFERD----QEILEAELHFPAHVSPDCCALIRR------ 266
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNVIL 678
                     C+  +P+ RPS++ ++L
Sbjct: 267 ----------CLAPKPSSRPSLEEILL 283

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E    GSL D L   +   L     R A+ VA G+ YL  +   + IH D+  RN+L
Sbjct: 87  MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLL 143
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIV--AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           +      KI DFGL + L  N    V     +    + APE   +   +  SD + FGV 
Sbjct: 144 LATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203
Query: 604 LLEI 607
           L E+
Sbjct: 204 LWEM 207

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E    GSL D L   +   L     R A+ VA G+ YL  +   + IH D+  RN+L
Sbjct: 91  MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLL 147
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIV--AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           +      KI DFGL + L  N    V     +    + APE   +   +  SD + FGV 
Sbjct: 148 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 207
Query: 604 LLEII 608
           L E+ 
Sbjct: 208 LWEMF 212

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E    GSL D L   +   L     R A+ VA G+ YL  +   + IH D+  RN+L
Sbjct: 87  MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLL 143
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIV--AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           +      KI DFGL + L  N    V     +    + APE   +   +  SD + FGV 
Sbjct: 144 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203
Query: 604 LLEI 607
           L E+
Sbjct: 204 LWEM 207

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 485 LLVYEFMSKGSLADLLFNLETR-PLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLR 542
           LL  E+   G L   L   E    L    +R  L D++  L YLH   E +IIH D+K  
Sbjct: 95  LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPE 151
Query: 543 NILIDDSWRA---KISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
           NI++    +    KI D G AK L  +Q  +     G+  Y+APE       TV  D +S
Sbjct: 152 NIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWS 209
Query: 600 FGVVLLEII 608
           FG +  E I
Sbjct: 210 FGTLAFECI 218

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 485 LLVYEFMSKGSLADLLFNLETR-PLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLR 542
           LL  E+   G L   L   E    L    +R  L D++  L YLH   E +IIH D+K  
Sbjct: 94  LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPE 150
Query: 543 NILIDDSWRA---KISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
           NI++    +    KI D G AK L  +Q  +     G+  Y+APE       TV  D +S
Sbjct: 151 NIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWS 208
Query: 600 FGVVLLEII 608
           FG +  E I
Sbjct: 209 FGTLAFECI 217

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E    GSL D L   +   L     R A+ VA G+ YL  +   + IH D+  RN+L
Sbjct: 87  MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLL 143
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIV--AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           +      KI DFGL + L  N    V     +    + APE   +   +  SD + FGV 
Sbjct: 144 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203
Query: 604 LLEI 607
           L E+
Sbjct: 204 LWEM 207

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHSK- 130
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI++FG +     ++   +    G+  Y+ PE     +
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGRM 185
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +  +  FE N 
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANT 213

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 483 KKLLVYEFMSKGSLADLLF--NLETRPL---WRDRVRIALDVARGLLYLHDECEVQIIHC 537
           K +++  FM  G L   L    LET P     +  ++  +D+A G+ YL +      +H 
Sbjct: 115 KPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHR 171
Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPN---QTGIVAGVRGSRGYMAPEWQNSGLITVK 594
           D+  RN ++ D     ++DFGL+K +      + G +A  +    ++A E     + T K
Sbjct: 172 DLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIA--KMPVKWIAIESLADRVYTSK 229
Query: 595 SDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLER 654
           SDV++FGV + EI          V   +       +Y+  + G   K  E+ +D++  E 
Sbjct: 230 SDVWAFGVTMWEIATRGMTPYPGVQNHE-------MYDYLLHGHRLKQPEDCLDEL-YEI 281
Query: 655 MVKTGLLCIQDEPNLRPSMKNVILMLEGTME 685
           M      C + +P  RP+   + L LE  +E
Sbjct: 282 MYS----CWRTDPLDRPTFSVLRLQLEKLLE 308

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 486 LVYEFMSKGSLADLL----FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKL 541
           LV + +S G L D +    F  E     +D   +   V   + YLH    + I+H D+K 
Sbjct: 97  LVMQLVSGGELFDRIVEKGFYTE-----KDASTLIRQVLDAVYYLH---RMGIVHRDLKP 148
Query: 542 RNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
            N+L    D+  +  ISDFGL+K  M  +  +++   G+ GY+APE       +   D +
Sbjct: 149 ENLLYYSQDEESKIMISDFGLSK--MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCW 206
Query: 599 SFGVVLLEIICCRSNF 614
           S GV+   ++C    F
Sbjct: 207 SIGVIAYILLCGYPPF 222

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 486 LVYEFMSKGSLADLLFNLET-------RPLWRDRVRIALDVARGLLYLHDECEVQIIHCD 538
           +V E    G L+ ++ + +        R +W+  V++       L ++H     +++H D
Sbjct: 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC----SALEHMHSR---RVMHRD 161
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           IK  N+ I  +   K+ D GL +    ++T     + G+  YM+PE  +      KSD++
Sbjct: 162 IKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIW 220
Query: 599 SFGVVLLEIICCRSNF 614
           S G +L E+   +S F
Sbjct: 221 SLGCLLYEMAALQSPF 236

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVA-RGLLYLHDECEVQIIHCDIKLRNILID 547
           E +  GSL  L+      P   DR    L  A  GL YLH     +I+H D+K  N+L+ 
Sbjct: 165 ELLEGGSLGQLVKEQGCLP--EDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLS 219
Query: 548 -DSWRAKISDFGLAKLLMPNQTG--IVAG--VRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
            D   A + DFG A  L P+  G  ++ G  + G+  +MAPE         K DV+S   
Sbjct: 220 SDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCC 279
Query: 603 VLLEII 608
           ++L ++
Sbjct: 280 MMLHML 285

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRA---KISDFGLAKLLMPNQTGIVAGVRGSR 578
            L Y H +    ++H D+K  NIL  D+      KI DFGLA+L   ++    A   G+ 
Sbjct: 136 ALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA--GTA 190
Query: 579 GYMAPEWQNSGLITVKSDVYSFGVVL 604
            YMAPE      +T K D++S GVV+
Sbjct: 191 LYMAPEVFKRD-VTFKCDIWSAGVVM 215

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 25/196 (12%)
Query: 485 LLVYEFMSKGSLADLLFNLE--TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR 542
            +V E   + SL +L    +  T P  R  +R    +  G  YLH     ++IH D+KL 
Sbjct: 117 FVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRN---RVIHRDLKLG 170
Query: 543 NILIDDSWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFG 601
           N+ +++    KI DFGLA K+    +   V  + G+  Y+APE  +    + + DV+S G
Sbjct: 171 NLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKGHSFEVDVWSIG 228
Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
            ++  ++  +  FE   S   E  L        +    N +    + K+           
Sbjct: 229 CIMYTLLVGKPPFE--TSCLKETYLRIKKNEYSIPKHINPVAASLIQKM----------- 275
Query: 662 CIQDEPNLRPSMKNVI 677
            +Q +P  RP++  ++
Sbjct: 276 -LQTDPTARPTINELL 290

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ 533
           L Y  +  + L +V E+M  G L +L+ N +    W  R   A +V   L  +H    + 
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA-RFYTA-EVVLALDAIH---SMG 193
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA--GVRGSRGYMAPEWQNS--- 588
            IH D+K  N+L+D S   K++DFG    +  N+ G+V      G+  Y++PE   S   
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKM--NKEGMVRCDTAVGTPDYISPEVLKSQGG 251
Query: 589 -GLITVKSDVYSFGVVLLEIICCRSNF 614
            G    + D +S GV L E++   + F
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 25/196 (12%)
Query: 485 LLVYEFMSKGSLADLLFNLE--TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR 542
            +V E   + SL +L    +  T P  R  +R    +  G  YLH     ++IH D+KL 
Sbjct: 115 FVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRN---RVIHRDLKLG 168
Query: 543 NILIDDSWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFG 601
           N+ +++    KI DFGLA K+    +   V  + G+  Y+APE  +    + + DV+S G
Sbjct: 169 NLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKGHSFEVDVWSIG 226
Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
            ++  ++  +  FE   S   E  L        +    N +    + K+           
Sbjct: 227 CIMYTLLVGKPPFE--TSCLKETYLRIKKNEYSIPKHINPVAASLIQKM----------- 273
Query: 662 CIQDEPNLRPSMKNVI 677
            +Q +P  RP++  ++
Sbjct: 274 -LQTDPTARPTINELL 288

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVA-RGLLYLHDECEVQIIHCDIKLRNILID 547
           E +  GSL  L+      P   DR    L  A  GL YLH     +I+H D+K  N+L+ 
Sbjct: 146 ELLEGGSLGQLVKEQGCLP--EDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLS 200
Query: 548 -DSWRAKISDFGLAKLLMPNQTG--IVAG--VRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
            D   A + DFG A  L P+  G  ++ G  + G+  +MAPE         K DV+S   
Sbjct: 201 SDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCC 260
Query: 603 VLLEII 608
           ++L ++
Sbjct: 261 MMLHML 266

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ 533
           L Y  +  + L +V E+M  G L +L+ N +    W  R   A +V   L  +H    + 
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA-RFYTA-EVVLALDAIH---SMG 188
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA--GVRGSRGYMAPEWQNS--- 588
            IH D+K  N+L+D S   K++DFG    +  N+ G+V      G+  Y++PE   S   
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKM--NKEGMVRCDTAVGTPDYISPEVLKSQGG 246
Query: 589 -GLITVKSDVYSFGVVLLEIICCRSNF 614
            G    + D +S GV L E++   + F
Sbjct: 247 DGYYGRECDWWSVGVFLYEMLVGDTPF 273

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 23/195 (11%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRN 543
            +V E   + SL +L  +   + L     R  L  +  G  YLH     ++IH D+KL N
Sbjct: 91  FVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGN 145
Query: 544 ILIDDSWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           + +++    KI DFGLA K+    +   V  + G+  Y+APE  +    + + DV+S G 
Sbjct: 146 LFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIAPEVLSKKGHSFEVDVWSIGC 203
Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLC 662
           ++  ++  +  FE   S   E  L        +    N +    + K+            
Sbjct: 204 IMYTLLVGKPPFE--TSCLKETYLRIKKNEYSIPKHINPVAASLIQKM------------ 249
Query: 663 IQDEPNLRPSMKNVI 677
           +Q +P  RP++  ++
Sbjct: 250 LQTDPTARPTINELL 264

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 487 VYEFMSKGSLADLLFNLETRPLWRDRVRI---ALDVARGLLYLHDECEVQIIHCDIKLRN 543
           V+  M   +L +L   L+ R    D   +   A  ++  L YL  +   + +H DI  RN
Sbjct: 85  VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARN 141
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           +L+  +   K+ DFGL++ +  +     +  +    +MAPE  N    T  SDV+ FGV 
Sbjct: 142 VLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 201
Query: 604 LLEII 608
           + EI+
Sbjct: 202 MWEIL 206

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR 575
           A  ++  L YL  +   + +H DI  RN+L+  +   K+ DFGL++ +  +     +  +
Sbjct: 145 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 201
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MAPE  N    T  SDV+ FGV + EI+
Sbjct: 202 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 14/147 (9%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ 533
           L Y  +  + L +V E+M  G L +L+ N +    W  R   A +V   L  +H    + 
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA-RFYTA-EVVLALDAIH---SMG 193
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA--GVRGSRGYMAPEWQNS--- 588
            IH D+K  N+L+D S   K++DFG    +  N+ G+V      G+  Y++PE   S   
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKM--NKEGMVRCDTAVGTPDYISPEVLKSQGG 251
Query: 589 -GLITVKSDVYSFGVVLLEIICCRSNF 614
            G    + D +S GV L E++   + F
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR 575
           A  ++  L YL  +   + +H DI  RN+L+  +   K+ DFGL++ +  +     +  +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MAPE  N    T  SDV+ FGV + EI+
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR 575
           A  ++  L YL  +   + +H DI  RN+L+  +   K+ DFGL++ +  +     +  +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MAPE  N    T  SDV+ FGV + EI+
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR 575
           A  ++  L YL  +   + +H DI  RN+L+  +   K+ DFGL++ +  +     +  +
Sbjct: 119 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 175
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MAPE  N    T  SDV+ FGV + EI+
Sbjct: 176 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR 575
           A  ++  L YL  +   + +H DI  RN+L+  +   K+ DFGL++ +  +     +  +
Sbjct: 122 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 178
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MAPE  N    T  SDV+ FGV + EI+
Sbjct: 179 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 33/200 (16%)
Query: 485 LLVYEFMSKGSLADLLFNLE--TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR 542
            +V E   + SL +L    +  T P  R  +R    +  G  YLH     ++IH D+KL 
Sbjct: 97  FVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRN---RVIHRDLKLG 150
Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLITVKSDV 597
           N+ +++    KI DFGLA  +         G R     G+  Y+APE  +    + + DV
Sbjct: 151 NLFLNEDLEVKIGDFGLATKVE------YDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 204
Query: 598 YSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVK 657
           +S G ++  ++  +  FE   S   E  L        +    N +    + K+       
Sbjct: 205 WSIGCIMYTLLVGKPPFE--TSCLKETYLRIKKNEYSIPKHINPVAASLIQKM------- 255
Query: 658 TGLLCIQDEPNLRPSMKNVI 677
                +Q +P  RP++  ++
Sbjct: 256 -----LQTDPTARPTINELL 270

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGY 580
           RGL +LH  C   I+H D+K  NIL+      K++DFGLA++   +    +A V  +  Y
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALAPVVVTLWY 177
Query: 581 MAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV 624
            APE           D++S G +  E+   +  F  N S AD++
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN-SEADQL 220

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR 575
           A  ++  L YL  +   + +H DI  RN+L+  +   K+ DFGL++ +  +     +  +
Sbjct: 120 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 176
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MAPE  N    T  SDV+ FGV + EI+
Sbjct: 177 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR 575
           A  ++  L YL  +   + +H DI  RN+L+  +   K+ DFGL++ +  +     +  +
Sbjct: 114 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 170
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MAPE  N    T  SDV+ FGV + EI+
Sbjct: 171 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRD----RVRIALDVARGLLYLHDECEVQIIHCDIKL 541
           +V E+M  G L +L+ N +    W       V +ALD    +          +IH D+K 
Sbjct: 152 MVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM---------GLIHRDVKP 202
Query: 542 RNILIDDSWRAKISDFGLAKLLMPNQTGIVA--GVRGSRGYMAPEWQNS----GLITVKS 595
            N+L+D     K++DFG    +  ++TG+V      G+  Y++PE   S    G    + 
Sbjct: 203 DNMLLDKHGHLKLADFGTCMKM--DETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGREC 260
Query: 596 DVYSFGVVLLEIICCRSNF 614
           D +S GV L E++   + F
Sbjct: 261 DWWSVGVFLFEMLVGDTPF 279

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR 575
           A  ++  L YL  +   + +H DI  RN+L+  +   K+ DFGL++ +  +     +  +
Sbjct: 497 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MAPE  N    T  SDV+ FGV + EI+
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 31/199 (15%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRN 543
            +V E   + SL +L  +   + L     R  L  +  G  YLH     ++IH D+KL N
Sbjct: 93  FVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGN 147
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLITVKSDVY 598
           + +++    KI DFGLA  +         G R     G+  Y+APE  +    + + DV+
Sbjct: 148 LFLNEDLEVKIGDFGLATKVE------YDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVW 201
Query: 599 SFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKT 658
           S G ++  ++  +  FE   S   E  L        +    N +    + K+        
Sbjct: 202 SIGCIMYTLLVGKPPFE--TSCLKETYLRIKKNEYSIPKHINPVAASLIQKM-------- 251
Query: 659 GLLCIQDEPNLRPSMKNVI 677
               +Q +P  RP++  ++
Sbjct: 252 ----LQTDPTARPTINELL 266

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 31/199 (15%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRN 543
            +V E   + SL +L  +   + L     R  L  +  G  YLH     ++IH D+KL N
Sbjct: 93  FVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGN 147
Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLITVKSDVY 598
           + +++    KI DFGLA  +         G R     G+  Y+APE  +    + + DV+
Sbjct: 148 LFLNEDLEVKIGDFGLATKVE------YDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVW 201
Query: 599 SFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKT 658
           S G ++  ++  +  FE   S   E  L        +    N +    + K+        
Sbjct: 202 SIGCIMYTLLVGKPPFE--TSCLKETYLRIKKNEYSIPKHINPVAASLIQKM-------- 251
Query: 659 GLLCIQDEPNLRPSMKNVI 677
               +Q +P  RP++  ++
Sbjct: 252 ----LQTDPTARPTINELL 266

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR 575
           A  ++  L YL  +   + +H DI  RN+L+  +   K+ DFGL++ +  +     +  +
Sbjct: 497 AYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
               +MAPE  N    T  SDV+ FGV + EI+
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWR--DRVRIALDVARGLLYLHDECEVQIIH 536
           H   K   + + M+ G   DL ++L    ++   D    A ++  GL ++H+     +++
Sbjct: 262 HTPDKLSFILDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVY 315
Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKS- 595
            D+K  NIL+D+    +ISD GLA      +    A V G+ GYMAPE    G+    S 
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLACDFSKKKPH--ASV-GTHGYMAPEVLQKGVAYDSSA 372
Query: 596 DVYSFGVVLLEIICCRSNF 614
           D +S G +L +++   S F
Sbjct: 373 DWFSLGCMLFKLLRGHSPF 391

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWR--DRVRIALDVARGLLYLHDECEVQIIH 536
           H   K   + + M+ G   DL ++L    ++   D    A ++  GL ++H+     +++
Sbjct: 261 HTPDKLSFILDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVY 314
Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKS- 595
            D+K  NIL+D+    +ISD GLA      +    A V G+ GYMAPE    G+    S 
Sbjct: 315 RDLKPANILLDEHGHVRISDLGLACDFSKKKPH--ASV-GTHGYMAPEVLQKGVAYDSSA 371
Query: 596 DVYSFGVVLLEIICCRSNF 614
           D +S G +L +++   S F
Sbjct: 372 DWFSLGCMLFKLLRGHSPF 390

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWR--DRVRIALDVARGLLYLHDECEVQIIH 536
           H   K   + + M+ G   DL ++L    ++   D    A ++  GL ++H+     +++
Sbjct: 262 HTPDKLSFILDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVY 315
Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKS- 595
            D+K  NIL+D+    +ISD GLA      +    A V G+ GYMAPE    G+    S 
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLACDFSKKKPH--ASV-GTHGYMAPEVLQKGVAYDSSA 372
Query: 596 DVYSFGVVLLEIICCRSNF 614
           D +S G +L +++   S F
Sbjct: 373 DWFSLGCMLFKLLRGHSPF 391

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWR--DRVRIALDVARGLLYLHDECEVQIIH 536
           H   K   + + M+ G   DL ++L    ++   D    A ++  GL ++H+     +++
Sbjct: 262 HTPDKLSFILDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVY 315
Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKS- 595
            D+K  NIL+D+    +ISD GLA      +    A V G+ GYMAPE    G+    S 
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLACDFSKKKPH--ASV-GTHGYMAPEVLQKGVAYDSSA 372
Query: 596 DVYSFGVVLLEIICCRSNF 614
           D +S G +L +++   S F
Sbjct: 373 DWFSLGCMLFKLLRGHSPF 391

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRN 543
           +L+ E +S G L D L   E   L  D     L  +  G+ YLH +   +I H D+K  N
Sbjct: 91  VLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPEN 145
Query: 544 ILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           I++ D    + R K+ DFG+A K+   N+      + G+  ++APE  N   + +++D++
Sbjct: 146 IMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMW 202
Query: 599 SFGVVLLEIICCRSNF 614
           S GV+   ++   S F
Sbjct: 203 SIGVITYILLSGASPF 218

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT-ELANALSYCHSK- 131
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 132 --RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC---GTLDYLPPEMIEGRM 186
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +     FE + 
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHT 214

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L  L      R    I  ++A  L Y H + 
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT-ELANALSYCHSK- 131
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 132 --RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGRM 186
Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNV 618
              K D++S GV+  E +     FE + 
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHT 214

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHLIR------- 283
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 284 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 324

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRN 543
           +L+ E +S G L D L   E   L  D     L  +  G+ YLH +   +I H D+K  N
Sbjct: 105 VLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPEN 159
Query: 544 ILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           I++ D    + R K+ DFG+A K+   N+      + G+  ++APE  N   + +++D++
Sbjct: 160 IMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMW 216
Query: 599 SFGVVLLEIICCRSNF 614
           S GV+   ++   S F
Sbjct: 217 SIGVITYILLSGASPF 232

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHLIR------- 241
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 242 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 282

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRN 543
           +L+ E +S G L D L   E   L  D     L  +  G+ YLH +   +I H D+K  N
Sbjct: 84  VLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPEN 138
Query: 544 ILIDD----SWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           I++ D    + R K+ DFG+A K+   N+      + G+  ++APE  N   + +++D++
Sbjct: 139 IMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMW 195
Query: 599 SFGVVLLEIICCRSNF 614
           S GV+   ++   S F
Sbjct: 196 SIGVITYILLSGASPF 211

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHLIR------- 268
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 269 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 309

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHLIR------- 283
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 284 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 324

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 206
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 207 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHLIR------- 255
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 256 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 296

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC-----EVQIIHCDIK 540
           LV ++   GSL D L N  T  +    +++AL  A GL +LH E      +  I H D+K
Sbjct: 84  LVSDYHEHGSLFDYL-NRYTVTV-EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 141
Query: 541 LRNILIDDSWRAKISDFGLAKLL--MPNQTGIVAGVR-GSRGYMAPEWQNSGLIT----- 592
            +NIL+  +    I+D GLA       +   I    R G++ YMAPE  +  +       
Sbjct: 142 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFES 201
Query: 593 -VKSDVYSFGVVLLEI 607
             ++D+Y+ G+V  EI
Sbjct: 202 FKRADIYAMGLVFWEI 217

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHLIR------- 241
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 242 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 282

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHLIR------- 256
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 257 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 297

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 226
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 227 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHLIR------- 275
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 276 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 316

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 191
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 192 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHLIR------- 240
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 241 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 281

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHLIR------- 241
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 242 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 282

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC-----EVQIIHCDIK 540
           LV ++   GSL D L N  T  +    +++AL  A GL +LH E      +  I H D+K
Sbjct: 79  LVSDYHEHGSLFDYL-NRYTVTV-EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 136
Query: 541 LRNILIDDSWRAKISDFGLAKLL--MPNQTGIVAGVR-GSRGYMAPEWQNSGLIT----- 592
            +NIL+  +    I+D GLA       +   I    R G++ YMAPE  +  +       
Sbjct: 137 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFES 196
Query: 593 -VKSDVYSFGVVLLEI 607
             ++D+Y+ G+V  EI
Sbjct: 197 FKRADIYAMGLVFWEI 212

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL-MPNQTGIVAGVRGSRG 579
           +GL YLH      I+H D+K  N+L+D++   K++DFGLAK    PN+      V  +R 
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRW 177
Query: 580 YMAPEWQ-NSGLITVKSDVYSFGVVLLEII 608
           Y APE    + +  V  D+++ G +L E++
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELL 207

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC-----EVQIIHCDIK 540
           LV ++   GSL D L N  T  +    +++AL  A GL +LH E      +  I H D+K
Sbjct: 104 LVSDYHEHGSLFDYL-NRYTVTV-EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 161
Query: 541 LRNILIDDSWRAKISDFGLAKLL--MPNQTGIVAGVR-GSRGYMAPEWQNSGLIT----- 592
            +NIL+  +    I+D GLA       +   I    R G++ YMAPE  +  +       
Sbjct: 162 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFES 221
Query: 593 -VKSDVYSFGVVLLEI 607
             ++D+Y+ G+V  EI
Sbjct: 222 FKRADIYAMGLVFWEI 237

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGY 580
           RGL +LH  C   I+H D+K  NIL+      K++DFGLA++   +    +  V  +  Y
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALTPVVVTLWY 185
Query: 581 MAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV 624
            APE           D++S G +  E+   +  F  N S AD++
Sbjct: 186 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN-SEADQL 228

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC-----EVQIIHCDIK 540
           LV ++   GSL D L N  T  +    +++AL  A GL +LH E      +  I H D+K
Sbjct: 117 LVSDYHEHGSLFDYL-NRYTVTV-EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 174
Query: 541 LRNILIDDSWRAKISDFGLAKLL--MPNQTGIVAGVR-GSRGYMAPEWQNSGLIT----- 592
            +NIL+  +    I+D GLA       +   I    R G++ YMAPE  +  +       
Sbjct: 175 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFES 234
Query: 593 -VKSDVYSFGVVLLEI 607
             ++D+Y+ G+V  EI
Sbjct: 235 FKRADIYAMGLVFWEI 250

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 191
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 192 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHLIR------- 240
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 241 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 281

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 27/167 (16%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE-----EE 646
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSXECQHLIRWCLALRP 263
Query: 647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPP 693
            D+ T E         IQ+     P M++V+L  E T EI + +  P
Sbjct: 264 XDRPTFEE--------IQNH----PWMQDVLLPQE-TAEIHLHSLSP 297

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC-----EVQIIHCDIK 540
           LV ++   GSL D L N  T  +    +++AL  A GL +LH E      +  I H D+K
Sbjct: 81  LVSDYHEHGSLFDYL-NRYTVTV-EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 138
Query: 541 LRNILIDDSWRAKISDFGLAKLL--MPNQTGIVAGVR-GSRGYMAPEWQNSGLIT----- 592
            +NIL+  +    I+D GLA       +   I    R G++ YMAPE  +  +       
Sbjct: 139 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFES 198
Query: 593 -VKSDVYSFGVVLLEI 607
             ++D+Y+ G+V  EI
Sbjct: 199 FKRADIYAMGLVFWEI 214

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE      DE ++   V+       F + V  E   + 
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQVF-------FRQRVSSECQHLI 268
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 269 --------RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE      DE ++   V+       F + V  E   + 
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQVF-------FRQRVSSECQHLI 268
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 269 --------RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 239
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 240 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSXECQHLIR------- 288
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 289 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 329

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC-----EVQIIHCDIK 540
           LV ++   GSL D L N  T  +    +++AL  A GL +LH E      +  I H D+K
Sbjct: 78  LVSDYHEHGSLFDYL-NRYTVTV-EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 135
Query: 541 LRNILIDDSWRAKISDFGLAKLL--MPNQTGIVAGVR-GSRGYMAPEWQNSGLIT----- 592
            +NIL+  +    I+D GLA       +   I    R G++ YMAPE  +  +       
Sbjct: 136 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFES 195
Query: 593 -VKSDVYSFGVVLLEI 607
             ++D+Y+ G+V  EI
Sbjct: 196 FKRADIYAMGLVFWEI 211

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGY 580
           +GL Y+H      ++H D+K  N+ +++    KI DFGLA+      TG V     +R Y
Sbjct: 137 KGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWY 189
Query: 581 MAPE----WQNSGLITVKSDVYSFGVVLLEIICCRSNFE 615
            APE    W +        D++S G ++ E++  ++ F+
Sbjct: 190 RAPEVILSWMHYNQTV---DIWSVGCIMAEMLTGKTLFK 225

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGY 580
           +GL Y+H      ++H D+K  N+ +++    KI DFGLA+      TG V     +R Y
Sbjct: 155 KGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWY 207
Query: 581 MAPE----WQNSGLITVKSDVYSFGVVLLEIICCRSNFE 615
            APE    W +        D++S G ++ E++  ++ F+
Sbjct: 208 RAPEVILSWMHYNQTV---DIWSVGCIMAEMLTGKTLFK 243

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE      DE ++   V+       F + V  E   + 
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQVF-------FRQRVSSECQHLI 267
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 268 --------RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 309

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 207
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSXECQHLIR------- 256
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 257 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 297

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 206
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 207 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSXECQHLIR------- 255
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 256 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 296

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSXECQHLIR------- 283
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 284 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 324

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 25/149 (16%)
Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLYLHDEC 530
           H  +K  LV+EFM      DL   +++R +      + L++ +        GL + H   
Sbjct: 73  HTENKLTLVFEFMDN----DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH--- 125
Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR----GYMAPE-W 585
           E +I+H D+K +N+LI+   + K+ DFGLA+       GI      S      Y AP+  
Sbjct: 126 ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF-----GIPVNTFSSEVVTLWYRAPDVL 180
Query: 586 QNSGLITVKSDVYSFGVVLLEIICCRSNF 614
             S   +   D++S G +L E+I  +  F
Sbjct: 181 MGSRTYSTSIDIWSCGCILAEMITGKPLF 209

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE      DE ++   V+       F + V  E   + 
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQVF-------FRQRVSSECQHLI 267
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 268 --------RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 309

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE      DE ++   V+       F + V  E   + 
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQVF-------FRQRVSXECQHLI 268
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 269 --------RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV EF   G L + + N        D   I   +  G+ YLH      I+H DIK  NIL
Sbjct: 123 LVTEFYEGGELFEQIINRHKFDEC-DAANIMKQILSGICYLHKH---NIVHRDIKPENIL 178
Query: 546 IDDS---WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +++       KI DFGL+     +    +    G+  Y+APE         K DV+S GV
Sbjct: 179 LENKNSLLNIKIVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLKKKY-NEKCDVWSCGV 235
Query: 603 VLLEIIC 609
           ++  ++C
Sbjct: 236 IMYILLC 242

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 525 YLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYM 581
           ++HD   V ++H D+K  N+L    +D+   KI DFG A+L  P+   +      +  Y 
Sbjct: 121 HMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYA 176
Query: 582 APEWQNSGLITVKSDVYSFGVVLLEIICCRSNFE-----VNVSTADEVLLSTWVYNCFVA 636
           APE  N        D++S GV+L  ++  +  F+     +  ++A E++      +    
Sbjct: 177 APELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE 236
Query: 637 GEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSM 673
           GE  K V +E   +        GLL +  +PN R  M
Sbjct: 237 GEAWKNVSQEAKDLI------QGLLTV--DPNKRLKM 265

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE      DE ++   V+       F + V  E   + 
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQVF-------FRQRVSXECQHLI 268
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 269 --------RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 19/132 (14%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ EF + G++  ++  LE RPL   ++++        L YLHD    +IIH D+K  NI
Sbjct: 111 ILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNI 166
Query: 545 LIDDSWRAKISDFGLA----KLLMPNQTGIVAGVRGSRGYMAP-----EWQNSGLITVKS 595
           L       K++DFG++    + +    + I     G+  +MAP     E         K+
Sbjct: 167 LFTLDGDIKLADFGVSAKNTRXIQRRDSFI-----GTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 596 DVYSFGVVLLEI 607
           DV+S G+ L+E+
Sbjct: 222 DVWSLGITLIEM 233

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 214
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 215 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSXECQHLIR------- 263
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 264 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 304

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE      DE ++   V+       F + V  E   + 
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQVF-------FRQRVSXECQHLI 267
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEIPILAFPP 693
                     C+   P+ RP+ + +        +L+ + T EI + +  P
Sbjct: 268 --------RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 309

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 19/132 (14%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ EF + G++  ++  LE RPL   ++++        L YLHD    +IIH D+K  NI
Sbjct: 111 ILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNI 166
Query: 545 LIDDSWRAKISDFGLA----KLLMPNQTGIVAGVRGSRGYMAP-----EWQNSGLITVKS 595
           L       K++DFG++    + +    + I     G+  +MAP     E         K+
Sbjct: 167 LFTLDGDIKLADFGVSAKNTRTIQRRDSFI-----GTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 596 DVYSFGVVLLEI 607
           DV+S G+ L+E+
Sbjct: 222 DVWSLGITLIEM 233

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 481 SSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLLYLHDECEVQIIHCD 538
           + K   V ++++ G   +L ++L+  R     R R  A ++A  L YLH    + I++ D
Sbjct: 111 ADKLYFVLDYINGG---ELFYHLQRERCFLEPRARFYAAEIASALGYLHS---LNIVYRD 164
Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           +K  NIL+D      ++DFGL K  +       +   G+  Y+APE  +        D +
Sbjct: 165 LKPENILLDSQGHIVLTDFGLCKENI-EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWW 223
Query: 599 SFGVVLLEII 608
             G VL E++
Sbjct: 224 CLGAVLYEML 233

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGY 580
           RGL +LH  C   I+H D+K  NIL+      K++DFGLA++   +    +  V  +  Y
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALDPVVVTLWY 177
Query: 581 MAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV 624
            APE           D++S G +  E+   +  F  N S AD++
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN-SEADQL 220

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGY 580
           RGL +LH  C   I+H D+K  NIL+      K++DFGLA++   +    +  V  +  Y
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALFPVVVTLWY 177
Query: 581 MAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV 624
            APE           D++S G +  E+   +  F  N S AD++
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN-SEADQL 220

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVR--IALDVARGLLYLHDECE 531
           L+Y  ++  KL L+ E++S G   +L   LE   ++ +        +++  L +LH +  
Sbjct: 86  LIYAFQTGGKLYLILEYLSGG---ELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG- 141
Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLI 591
             II+ D+K  NI+++     K++DFGL K  + + T +     G+  YMAPE       
Sbjct: 142 --IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAPEILMRSGH 198
Query: 592 TVKSDVYSFGVVLLEIICCRSNF--EVNVSTADEVL 625
               D +S G ++ +++     F  E    T D++L
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL 234

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVR--IALDVARGLLYLHDECE 531
           L+Y  ++  KL L+ E++S G   +L   LE   ++ +        +++  L +LH +  
Sbjct: 86  LIYAFQTGGKLYLILEYLSGG---ELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG- 141
Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLI 591
             II+ D+K  NI+++     K++DFGL K  + + T +     G+  YMAPE       
Sbjct: 142 --IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEYMAPEILMRSGH 198
Query: 592 TVKSDVYSFGVVLLEIICCRSNF--EVNVSTADEVL 625
               D +S G ++ +++     F  E    T D++L
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL 234

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 34/178 (19%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA 572
           V+ ALD+ARG+ +LH   E  I    +  R+++ID+   A+IS   +A +    Q+    
Sbjct: 114 VKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARIS---MADVKFSFQS---P 166
Query: 573 GVRGSRGYMAPE-WQNSGLITVK--SDVYSFGVVLLEIICCR------SNFEVNVSTADE 623
           G   +  ++APE  Q     T +  +D++SF V+L E++         SN E+ +  A E
Sbjct: 167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE 226
Query: 624 VLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
            L  T      ++   +KL++                +C+ ++P  RP    ++ +LE
Sbjct: 227 GLRPT--IPPGISPHVSKLMK----------------ICMNEDPAKRPKFDMIVPILE 266

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++R+   +L+ E +S G L D L   E+     +       +  G+ YLH +   +I 
Sbjct: 83  VYENRTDV-VLILELVSGGELFDFLAQKESLS-EEEATSFIKQILDGVNYLHTK---KIA 137
Query: 536 HCDIKLRNILIDDS----WRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D        K+ DFGLA  +   + G+    + G+  ++APE  N   
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 195 LGLEADMWSIGVITYILLSGASPF 218

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 19/132 (14%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ EF + G++  ++  LE RPL   ++++        L YLHD    +IIH D+K  NI
Sbjct: 111 ILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNI 166
Query: 545 LIDDSWRAKISDFGLA----KLLMPNQTGIVAGVRGSRGYMAP-----EWQNSGLITVKS 595
           L       K++DFG++    + +      I     G+  +MAP     E         K+
Sbjct: 167 LFTLDGDIKLADFGVSAKNTRXIQRRDXFI-----GTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 596 DVYSFGVVLLEI 607
           DV+S G+ L+E+
Sbjct: 222 DVWSLGITLIEM 233

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 167 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC----- 218
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 190
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 191 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHLIR------- 239
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEI 686
                     C+   P+ RP+ + +        +L+ + T EI
Sbjct: 240 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 273

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 21/138 (15%)
Query: 486 LVYEFMSKGSLADLLF------NLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           LV E+ S G + D L         E R  +R        +   + Y H +    I+H D+
Sbjct: 91  LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------IVSAVQYCHQKY---IVHRDL 140
Query: 540 KLRNILIDDSWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDV 597
           K  N+L+D     KI+DFG + +  + N+        GS  Y APE +Q       + DV
Sbjct: 141 KAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC---GSPPYAAPELFQGKKYDGPEVDV 197
Query: 598 YSFGVVLLEIICCRSNFE 615
           +S GV+L  ++     F+
Sbjct: 198 WSLGVILYTLVSGSLPFD 215

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV ++   G L  LL   E R L  +  R  L  A  ++ +    ++  +H DIK  NIL
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDR-LPEEMARFYL--AEMVIAIDSVHQLHYVHRDIKPDNIL 207
Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-----GLITVKSDVYSF 600
           +D +   +++DFG    LM + T   +   G+  Y++PE   +     G    + D +S 
Sbjct: 208 MDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSL 267
Query: 601 GVVLLEIICCRSNF 614
           GV + E++   + F
Sbjct: 268 GVCMYEMLYGETPF 281

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDE 529
           I SL+   H      LV+EFM K  L  +L   +T  L   +++I L  + RG+ + H  
Sbjct: 81  IVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTG-LQDSQIKIYLYQLLRGVAHCHQH 138
Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL-MPNQTGIVAGVRGSRGYMAPE-WQN 587
              +I+H D+K +N+LI+     K++DFGLA+   +P ++     V  +  Y AP+    
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMG 193
Query: 588 SGLITVKSDVYSFGVVLLEIICCRSNF 614
           S   +   D++S G +  E+I  +  F
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLF 220

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHLIR------- 236
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEI 686
                     C+   P+ RP+ + +        +L+ + T EI
Sbjct: 237 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 270

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 19/137 (13%)
Query: 486 LVYEFMSKGSLADLLF------NLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           L+ E+ S G + D L         E R  +R        +   + Y H +   +I+H D+
Sbjct: 88  LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ-------IVSAVQYCHQK---RIVHRDL 137
Query: 540 KLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVY 598
           K  N+L+D     KI+DFG +        G +    GS  Y APE +Q       + DV+
Sbjct: 138 KAENLLLDADMNIKIADFGFSNEFTVG--GKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 195
Query: 599 SFGVVLLEIICCRSNFE 615
           S GV+L  ++     F+
Sbjct: 196 SLGVILYTLVSGSLPFD 212

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 513 VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ----- 567
           + I L +A  + +LH +    ++H D+K  NI        K+ DFGL   +  ++     
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 568 -TGIVAGVR-----GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
            T + A  R     G++ YM+PE  +    + K D++S G++L E++
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++R+   +L+ E +S G L D L   E+     +       +  G+ YLH +   +I 
Sbjct: 83  VYENRTDV-VLILELVSGGELFDFLAQKESLS-EEEATSFIKQILDGVNYLHTK---KIA 137
Query: 536 HCDIKLRNILIDDS----WRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D        K+ DFGLA  +   + G+    + G+  ++APE  N   
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 195 LGLEADMWSIGVITYILLSGASPF 218

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDE 529
           I SL+   H      LV+EFM K  L  +L   +T  L   +++I L  + RG+ + H  
Sbjct: 81  IVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTG-LQDSQIKIYLYQLLRGVAHCHQH 138
Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL-MPNQTGIVAGVRGSRGYMAPE-WQN 587
              +I+H D+K +N+LI+     K++DFGLA+   +P ++     V  +  Y AP+    
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMG 193
Query: 588 SGLITVKSDVYSFGVVLLEIICCRSNF 614
           S   +   D++S G +  E+I  +  F
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLF 220

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++R+   +L+ E +S G L D L   E+     +       +  G+ YLH +   +I 
Sbjct: 83  VYENRTDV-VLILELVSGGELFDFLAQKESLS-EEEATSFIKQILDGVNYLHTK---KIA 137
Query: 536 HCDIKLRNILIDDS----WRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D        K+ DFGLA  +   + G+    + G+  ++APE  N   
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 195 LGLEADMWSIGVITYILLSGASPF 218

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLL----------MPNQTGIVAGVRGSRGYMAP 583
           +IH D+K  N+LI+ +   K+ DFGLA+++             Q+G+V  V  +R Y AP
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV-ATRWYRAP 191
Query: 584 EWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           E    S   +   DV+S G +L E+   R  F
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 145 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC----- 196
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 19/137 (13%)
Query: 486 LVYEFMSKGSLADLLF------NLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           L+ E+ S G + D L         E R  +R        +   + Y H +   +I+H D+
Sbjct: 91  LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ-------IVSAVQYCHQK---RIVHRDL 140
Query: 540 KLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVY 598
           K  N+L+D     KI+DFG +        G +    G+  Y APE +Q       + DV+
Sbjct: 141 KAENLLLDADMNIKIADFGFSNEFTVG--GKLDAFCGAPPYAAPELFQGKKYDGPEVDVW 198
Query: 599 SFGVVLLEIICCRSNFE 615
           S GV+L  ++     F+
Sbjct: 199 SLGVILYTLVSGSLPFD 215

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 145 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC----- 196
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 141 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC----- 192
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 193 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++R+   +L+ E +S G L D L   E+     +       +  G+ YLH +   +I 
Sbjct: 83  VYENRTDV-VLILELVSGGELFDFLAQKESLS-EEEATSFIKQILDGVNYLHTK---KIA 137
Query: 536 HCDIKLRNILIDDS----WRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D        K+ DFGLA  +   + G+    + G+  ++APE  N   
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 195 LGLEADMWSIGVITYILLSGASPF 218

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 152 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC----- 203
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 204 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 167 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC----- 218
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           VY++R+   +L+ E +S G L D L   E+     +       +  G+ YLH +   +I 
Sbjct: 83  VYENRTDV-VLILELVSGGELFDFLAQKESLS-EEEATSFIKQILDGVNYLHTK---KIA 137
Query: 536 HCDIKLRNILIDDS----WRAKISDFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGL 590
           H D+K  NI++ D        K+ DFGLA  +   + G+    + G+  ++APE  N   
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 591 ITVKSDVYSFGVVLLEIICCRSNF 614
           + +++D++S GV+   ++   S F
Sbjct: 195 LGLEADMWSIGVITYILLSGASPF 218

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 171 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC----- 222
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 223 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE +    +E++     +   V+ E   L+        
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSXECQHLIR------- 236
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEI 686
                     C+   P+ RP+ + +        +L+ + T EI
Sbjct: 237 ---------WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 270

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 161 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC----- 212
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 213 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC----- 184
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 212 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC----- 263
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 264 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 137 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC----- 188
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 189 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 169 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC----- 220
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 221 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP-NQTGIVAGVRGSRGY 580
           GL YLH +    I+H DIK  N+L+      KIS  G+A+ L P          +GS  +
Sbjct: 121 GLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 581 MAPEWQNSGLIT---VKSDVYSFGVVLLEIICCRSNFE 615
             PE  N GL T    K D++S GV L  I      FE
Sbjct: 178 QPPEIAN-GLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC----- 184
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 21/138 (15%)
Query: 486 LVYEFMSKGSLADLLF------NLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           LV E+ S G + D L         E R  +R        +   + Y H +    I+H D+
Sbjct: 90  LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------IVSAVQYCHQKF---IVHRDL 139
Query: 540 KLRNILIDDSWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDV 597
           K  N+L+D     KI+DFG + +    N+        GS  Y APE +Q       + DV
Sbjct: 140 KAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDGPEVDV 196
Query: 598 YSFGVVLLEIICCRSNFE 615
           +S GV+L  ++     F+
Sbjct: 197 WSLGVILYTLVSGSLPFD 214

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC----- 184
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 21/138 (15%)
Query: 486 LVYEFMSKGSLADLLF------NLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           LV E+ S G + D L         E R  +R        +   + Y H +    I+H D+
Sbjct: 90  LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-------IVSAVQYCHQKF---IVHRDL 139
Query: 540 KLRNILIDDSWRAKISDFGLA-KLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDV 597
           K  N+L+D     KI+DFG + +    N+        GS  Y APE +Q       + DV
Sbjct: 140 KAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDGPEVDV 196
Query: 598 YSFGVVLLEIICCRSNFE 615
           +S GV+L  ++     F+
Sbjct: 197 WSLGVILYTLVSGSLPFD 214

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC----- 184
Query: 577 SRGYMAPEWQNSGL-ITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE        T   DV+S G VL E++  +  F
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 22/139 (15%)
Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+M      DL   LE  PL  +  R+ +  + RGL Y+H      ++H D+K  N+
Sbjct: 99  IVQEYME----TDLANVLEQGPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANL 151
Query: 545 LID-DSWRAKISDFGLAKLLMPNQT-------GIVAG-VRGSRGYMAPEWQNSGLITVKS 595
            I+ +    KI DFGLA+++ P+ +       G+V    R  R  ++P      +     
Sbjct: 152 FINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAI----- 206
Query: 596 DVYSFGVVLLEIICCRSNF 614
           D+++ G +  E++  ++ F
Sbjct: 207 DMWAAGCIFAEMLTGKTLF 225

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           ++H DIK  NILID +    K+ DFG   LL   +  +     G+R Y  PEW       
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 593 VKS-DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            +S  V+S G++L +++C    FE      DE ++   V+       F + V  E   + 
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQVF-------FRQRVSSECQHLI 235
Query: 652 LERMVKTGLLCIQDEPNLRPSMKNV--------ILMLEGTMEI 686
                     C+   P+ RP+ + +        +L+ + T EI
Sbjct: 236 --------RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 270

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 138 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC----- 189
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 190 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLM---PNQTGIVAGVRG 576
           R L Y+H      I H DIK +N+L+D D+   K+ DFG AK L+   PN + I      
Sbjct: 134 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC----- 185
Query: 577 SRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNF 614
           SR Y APE    +   T   DV+S G VL E++  +  F
Sbjct: 186 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	702
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-80
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	5e-71
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-68
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-51
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	9e-44
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-41
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-41
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-41
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-41
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-39
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-38
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-37
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-37
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-36
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-36
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-36
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	9e-36
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	5e-35
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-25
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-25
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-25
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	5e-25
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-24
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-24
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	8e-24
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-23
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-23
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	7e-23
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	8e-23
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	9e-23
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-22
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-22
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-22
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-22
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-22
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-22
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-22
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-22
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-22
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-22
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	3e-22
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-22
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	5e-22
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	5e-22
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	7e-22
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	7e-22
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-21
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-21
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-21
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-21
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-21
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-21
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-21
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-21
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-21
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-21
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	6e-21
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	7e-21
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	8e-21
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-20
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-20
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-20
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	3e-20
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-20
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-20
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-20
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-20
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	4e-20
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	4e-20
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	5e-20
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	6e-20
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	9e-20
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-19
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-19
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-19
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-19
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-19
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-19
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-19
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-19
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-19
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-19
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	4e-19
4aoj_A	329	High affinity nerve growth factor receptor; transf	8e-19
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	9e-19
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-18
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-18
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-18
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-18
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-18
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-18
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-18
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	5e-18
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	5e-18
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-18
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-17
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-17
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-17
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-17
3an0_A	340	Dual specificity mitogen-activated protein kinase;	5e-17
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-17
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	9e-17
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-16
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-16
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	7e-16
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-15
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-15
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-15
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-15
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	6e-15
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	8e-15
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	9e-15
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-14
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-14
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-14
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-14
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	4e-14
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	2e-05
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-14
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	6e-14
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-13
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-13
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	2e-13
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	2e-06
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	2e-05
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-13
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-13
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	8e-13
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	2e-07
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	5e-05
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	9e-13
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-12
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-12
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-12
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-12
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	3e-12
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-12
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	4e-12
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	5e-12
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	5e-12
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	9e-07
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	4e-05
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	8e-12
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	8e-12
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	1e-11
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	1e-04
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-11
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-11
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-11
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-11
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-11
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-11
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-11
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	3e-11
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	5e-08
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	3e-11
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	3e-08
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-11
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-11
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	3e-11
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-11
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	3e-11
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	5e-08
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-11
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	4e-11
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	4e-11
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-11
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-11
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	4e-11
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	4e-11
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	5e-11
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	2e-05
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-11
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-11
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	5e-11
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	6e-11
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	7e-11
3bhy_A	283	Death-associated protein kinase 3; death associate	7e-11
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	7e-11
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	8e-11
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	8e-11
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	8e-11
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	9e-11
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	9e-11
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-10
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-10
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-10
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-10
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	2e-10
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	5e-09
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-10
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-10
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-10
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-10
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-10
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	2e-10
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	9e-08
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-10
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-10
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-10
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	4e-10
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-10
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	6e-10
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	6e-10
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	8e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	9e-10
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-09
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-09
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-09
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-09
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	2e-09
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	5e-09
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-09
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-09
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-09
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-09
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-09
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-09
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	3e-09
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	4e-09
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	4e-09
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	4e-09
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	5e-09
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	6e-09
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	6e-09
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	8e-09
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	9e-09
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	9e-09
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-08
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-08
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-08
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-08
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-08
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-08
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-08
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	3e-08
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-08
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	6e-08
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	8e-08
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-07
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-07
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-07
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-07
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-07
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	4e-07
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	5e-07
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	7e-07
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	8e-07
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-06
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-06
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-06
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-06
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-05
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	4e-05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	7e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  258 bits (662), Expect = 1e-80
 Identities = 81/210 (38%), Positives = 121/210 (57%), Gaps = 8/210 (3%)

Query: 481 SSKKLLVYEFMSKGSLADLLFNLETRPL---WRDRVRIALDVARGLLYLHDECEVQIIHC 537
            +++LLVY +M+ GS+A  L           W  R RIAL  ARGL YLHD C+ +IIH 
Sbjct: 99  PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHR 158

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDV 597
           D+K  NIL+D+ + A + DFGLAKL+    T +   VRG+ G++APE+ ++G  + K+DV
Sbjct: 159 DVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDV 218

Query: 598 YSFGVVLLEIICCRSNFEVNVSTADE-VLLSTWVYNCFVAGEFNKLV----EEEVDKITL 652
           + +GV+LLE+I  +  F++     D+ V+L  WV       +   LV    +       +
Sbjct: 219 FGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEV 278

Query: 653 ERMVKTGLLCIQDEPNLRPSMKNVILMLEG 682
           E++++  LLC Q  P  RP M  V+ MLEG
Sbjct: 279 EQLIQVALLCTQSSPMERPKMSEVVRMLEG 308

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  233 bits (596), Expect = 5e-71
 Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 12/222 (5%)

Query: 473 SLLVYKHRSSKKLLVYEFMSKGSLADLLF--NLETRPL-WRDRVRIALDVARGLLYLHDE 529
           SL+ +    ++ +L+Y++M  G+L   L+  +L T  + W  R+ I +  ARGL YLH  
Sbjct: 99  SLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR 158

Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL-LMPNQTGIVAGVRGSRGYMAPEWQNS 588
               IIH D+K  NIL+D+++  KI+DFG++K     +QT +   V+G+ GY+ PE+   
Sbjct: 159 A---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIK 215

Query: 589 GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV----E 644
           G +T KSDVYSFGVVL E++C RS    ++   + V L+ W       G+  ++V     
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-EMVNLAEWAVESHNNGQLEQIVDPNLA 274

Query: 645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEI 686
           +++   +L +   T + C+      RPSM +V+  LE  + +
Sbjct: 275 DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  225 bits (575), Expect = 4e-68
 Identities = 74/206 (35%), Positives = 103/206 (50%), Gaps = 14/206 (6%)

Query: 484 KLLVYEFMSKGSLADLLFNLETRPL--WRDRVRIALDVARGLLYLHDECEVQIIHCDIKL 541
             LVY +M  GSL D L  L+  P   W  R +IA   A G+ +LH+      IH DIK 
Sbjct: 105 LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKS 161

Query: 542 RNILIDDSWRAKISDFGLAKLL-MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSF 600
            NIL+D+++ AKISDFGLA+      QT + + + G+  YMAPE    G IT KSD+YSF
Sbjct: 162 ANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSF 220

Query: 601 GVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFV-AGEFNKLVE---EEVDKITLERMV 656
           GVVLLEII      +      +  LL                 ++    + D  ++E M 
Sbjct: 221 GVVLLEIITGLPAVD---EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMY 277

Query: 657 KTGLLCIQDEPNLRPSMKNVILMLEG 682
                C+ ++ N RP +K V  +L+ 
Sbjct: 278 SVASQCLHEKKNKRPDIKKVQQLLQE 303

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  180 bits (458), Expect = 3e-51
 Identities = 54/227 (23%), Positives = 89/227 (39%), Gaps = 28/227 (12%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQ---- 533
                  L+  F  KGSL+D L       + W +   IA  +ARGL YLH++        
Sbjct: 92  SVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148

Query: 534 ---IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVRGSRGYMAPE----- 584
              I H DIK +N+L+ ++  A I+DFGLA      ++     G  G+R YMAPE     
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGA 208

Query: 585 WQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV- 643
                   ++ D+Y+ G+VL E+    +  +  V     +     +       +  ++V 
Sbjct: 209 INFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD-EYMLPFEEEIGQHPSLEDMQEVVV 267

Query: 644 --------EEEVDK-ITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
                    +   K   +  + +T   C   +   R S   V   + 
Sbjct: 268 HKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  159 bits (404), Expect = 9e-44
 Identities = 58/254 (22%), Positives = 89/254 (35%), Gaps = 34/254 (13%)

Query: 481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDE------CEVQI 534
             + LLV E+   GSL   L        W    R+A  V RGL YLH E       +  I
Sbjct: 84  RMEYLLVMEYYPNGSLXKYLSL--HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141

Query: 535 IHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-------GVRGSRGYMAPE--- 584
            H D+  RN+L+ +     ISDFGL+  L  N+               G+  YMAPE   
Sbjct: 142 SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLE 201

Query: 585 ----WQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEF 639
                ++      + D+Y+ G++  EI   C   F        ++   T V N     + 
Sbjct: 202 GAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDM 261

Query: 640 NKLVEEE-----------VDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPI 688
             LV  E            + + +  + +T   C   +   R + +     +   M I  
Sbjct: 262 QVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321

Query: 689 LAFPPLSHVNSLSH 702
                    +   H
Sbjct: 322 RNKSVSPTAHHHHH 335

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  151 bits (384), Expect = 2e-41
 Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 15/200 (7%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V ++    SL   L   ET+   +  + IA   ARG+ YLH +    IIH D+K  NI 
Sbjct: 96  IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIF 152

Query: 546 IDDSWRAKISDFGLAKLL-MPNQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           + +    KI DFGLA      + +     + GS  +MAPE    Q+S   + +SDVY+FG
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212

Query: 602 VVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLL 661
           +VL E++  +  +  N++  D+++    +    V          +V     +RM +    
Sbjct: 213 IVLYELMTGQLPYS-NINNRDQII---EM----VGRGSLSPDLSKVRSNCPKRMKRLMAE 264

Query: 662 CIQDEPNLRPSMKNVILMLE 681
           C++ + + RPS   ++  +E
Sbjct: 265 CLKKKRDERPSFPRILAEIE 284

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  152 bits (385), Expect = 2e-41
 Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 25/218 (11%)

Query: 486 LVYEFMSKGSLADLLFNLETRPL--WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           +V E++S+GSL  LL     R     R R+ +A DVA+G+ YLH      I+H ++K  N
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPN 169

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           +L+D  +  K+ DFGL++ L  +         G+  +MAPE         KSDVYSFGV+
Sbjct: 170 LLVDKKYTVKVCDFGLSR-LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVI 228

Query: 604 LLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKL---VEEEVDKITLERMVKTGL 660
           L E+   +  +  N++ A  V          V   F      +   ++      +     
Sbjct: 229 LWELATLQQPWG-NLNPAQVVAA--------VG--FKCKRLEIPRNLNPQVAAIIEG--- 274

Query: 661 LCIQDEPNLRPSMKNVILMLEGTMEIPILAFPPLSHVN 698
            C  +EP  RPS   ++ +L     +   A PP +  +
Sbjct: 275 -CWTNEPWKRPSFATIMDLLR---PLIKSAVPPPNRSD 308

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  152 bits (385), Expect = 2e-41
 Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 26/224 (11%)

Query: 486 LVYEFMSKGSLADLLFNLETRPL--WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           LV E+   GSL ++L   E  P       +   L  ++G+ YLH      +IH D+K  N
Sbjct: 76  LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135

Query: 544 ILIDDSWR-AKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           +L+       KI DFG A  +  + T       GS  +MAPE       + K DV+S+G+
Sbjct: 136 LLLVAGGTVLKICDFGTACDIQTHMTNNK----GSAAWMAPEVFEGSNYSEKCDVFSWGI 191

Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAG----EFNKLVEEEVDKITLERMVKT 658
           +L E+I  R  F+       E+    +     V         K + + ++ + + R    
Sbjct: 192 ILWEVITRRKPFD-------EIGGPAFRIMWAVHNGTRPPLIKNLPKPIESL-MTR---- 239

Query: 659 GLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPPLSHVNSLSH 702
              C   +P+ RPSM+ ++ ++   M     A  PL +    S 
Sbjct: 240 ---CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSL 280

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  145 bits (367), Expect = 3e-39
 Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 35/206 (16%)

Query: 486 LVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+  +M  GSL ++L       +     V+ ALD+ARG+ +LH   E  I    +  R++
Sbjct: 86  LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSV 144

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFG 601
           +ID+   A+IS   +             G   +  ++APE    +        +D++SF 
Sbjct: 145 MIDEDMTARISMADVKFSFQSP------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFA 198

Query: 602 VVLLEIICCR------SNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERM 655
           V+L E++         SN E+ +  A E L  T       +   +KL++           
Sbjct: 199 VLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGI--SPHVSKLMKI---------- 246

Query: 656 VKTGLLCIQDEPNLRPSMKNVILMLE 681
                 C+ ++P  RP    ++ +LE
Sbjct: 247 ------CMNEDPAKRPKFDMIVPILE 266

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  143 bits (362), Expect = 3e-38
 Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 27/230 (11%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
            + E++  G+L  ++ +++++  W  RV  A D+A G+ YLH      IIH D+   N L
Sbjct: 84  FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCL 140

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAG-------------VRGSRGYMAPEWQNSGLIT 592
           + ++    ++DFGLA+L++  +T                  V G+  +MAPE  N     
Sbjct: 141 VRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYD 200

Query: 593 VKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL 652
            K DV+SFG+VL EII   +     +    +  L+       V G  ++           
Sbjct: 201 EKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN-------VRGFLDRYCPPNCPPSFF 253

Query: 653 ERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPPLSHVNSLSH 702
              V+    C   +P  RPS   +   LE          P    +  L  
Sbjct: 254 PITVR----CCDLDPEKRPSFVKLEHWLETLRMHLAGHLPLGPQLEQLDR 299

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  141 bits (357), Expect = 1e-37
 Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 22/203 (10%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V EF+  G L   L +      W  ++R+ LD+A G+ Y+ +     I+H D++  NI 
Sbjct: 98  MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIF 156

Query: 546 IDDSWR-----AKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE--WQNSGLITVKSDVY 598
           +          AK++DFGL++  + + +G++    G+  +MAPE         T K+D Y
Sbjct: 157 LQSLDENAPVCAKVADFGLSQQSVHSVSGLL----GNFQWMAPETIGAEEESYTEKADTY 212

Query: 599 SFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKT 658
           SF ++L  I+     F+   S    +     +    +     +     +  + +E     
Sbjct: 213 SFAMILYTILTGEGPFD-EYSYGK-IKFINMIREEGLRPTIPEDCPPRLRNV-IEL---- 265

Query: 659 GLLCIQDEPNLRPSMKNVILMLE 681
              C   +P  RP    ++  L 
Sbjct: 266 ---CWSGDPKKRPHFSYIVKELS 285

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  141 bits (357), Expect = 2e-37
 Identities = 40/211 (18%), Positives = 85/211 (40%), Gaps = 33/211 (15%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           ++       +L  ++ + +         +IA ++ +G+ YLH +    I+H D+K +N+ 
Sbjct: 106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVF 162

Query: 546 IDDSWRAKISDFGLAKL----LMPNQTGIVAGVRGSRGYMAPE---------WQNSGLIT 592
            D+  +  I+DFGL  +        +   +    G   ++APE          ++    +
Sbjct: 163 YDN-GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFS 221

Query: 593 VKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNK--LVEEEVDKI 650
             SDV++ G +  E+      F+     A+ ++        +  G   K  L +  + K 
Sbjct: 222 KHSDVFALGTIWYELHAREWPFKTQ--PAEAII--------WQMGTGMKPNLSQIGMGKE 271

Query: 651 TLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
             + ++     C   E   RP+   ++ MLE
Sbjct: 272 ISDILLF----CWAFEQEERPTFTKLMDMLE 298

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  137 bits (348), Expect = 1e-36
 Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 39/211 (18%)

Query: 486 LVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV EF   G L  +L     + +     V  A+ +ARG+ YLHDE  V IIH D+K  NI
Sbjct: 83  LVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNI 139

Query: 545 LIDDS--------WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSD 596
           LI              KI+DFGLA+    ++T  ++   G+  +MAPE   + + +  SD
Sbjct: 140 LILQKVENGDLSNKILKITDFGLAREW--HRTTKMSAA-GAYAWMAPEVIRASMFSKGSD 196

Query: 597 VYSFGVVLLEIICCR------SNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI 650
           V+S+GV+L E++             V    A   L       C     F KL+E+     
Sbjct: 197 VWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTC--PEPFAKLMED----- 249

Query: 651 TLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
                      C   +P+ RPS  N++  L 
Sbjct: 250 -----------CWNPDPHSRPSFTNILDQLT 269

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  137 bits (348), Expect = 2e-36
 Identities = 51/221 (23%), Positives = 84/221 (38%), Gaps = 30/221 (13%)

Query: 486 LVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQ-----IIHCDI 539
           L+  +   GSL D L   +   L     +RI L +A GL +LH E         I H D+
Sbjct: 83  LITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDL 139

Query: 540 KLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA---GVRGSRGYMAPE------WQNSGL 590
           K +NIL+  + +  I+D GLA +   +   +        G++ YMAPE        +   
Sbjct: 140 KSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFD 199

Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV------- 643
              + D+++FG+VL E+     +  +      +      V N     +  K+V       
Sbjct: 200 SYKRVDIWAFGLVLWEVARRMVSNGIVEDY--KPPFYDVVPNDPSFEDMRKVVCVDQQRP 257

Query: 644 ---EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
                     TL  + K    C    P+ R +   +   L 
Sbjct: 258 NIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  137 bits (346), Expect = 9e-36
 Identities = 48/222 (21%), Positives = 86/222 (38%), Gaps = 30/222 (13%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDE-----CEVQIIHCD 538
            L+ ++   GSL D L   ++  L  +  +++A     GL +LH E      +  I H D
Sbjct: 111 YLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRD 167

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA---GVRGSRGYMAPE------WQNSG 589
           +K +NIL+  +    I+D GLA   + +   +        G++ YM PE       +N  
Sbjct: 168 LKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHF 227

Query: 590 LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV------ 643
              + +D+YSFG++L E+     +  +      ++     V +     +  ++V      
Sbjct: 228 QSYIMADMYSFGLILWEVARRCVSGGIVEEY--QLPYHDLVPSDPSYEDMREIVCIKKLR 285

Query: 644 ----EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
                       L +M K    C    P  R +   V   L 
Sbjct: 286 PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  135 bits (341), Expect = 5e-35
 Identities = 52/221 (23%), Positives = 81/221 (36%), Gaps = 30/221 (13%)

Query: 486 LVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQ-----IIHCDI 539
           LV ++   GSL D L       +     +++AL  A GL +LH E         I H D+
Sbjct: 117 LVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 173

Query: 540 KLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA---GVRGSRGYMAPE-WQNSGLITV-- 593
           K +NIL+  +    I+D GLA         I        G++ YMAPE   +S  +    
Sbjct: 174 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 233

Query: 594 ---KSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV------- 643
              ++D+Y+ G+V  EI    S   ++     ++     V +     E  K+V       
Sbjct: 234 SFKRADIYAMGLVFWEIARRCSIGGIHEDY--QLPYYDLVPSDPSVEEMRKVVCEQKLRP 291

Query: 644 ---EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
                      L  M K    C       R +   +   L 
Sbjct: 292 NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  107 bits (270), Expect = 2e-25
 Identities = 49/215 (22%), Positives = 78/215 (36%), Gaps = 38/215 (17%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            +V E +  G     L     R   +  +++  D A G+ YL        IH D+  RN 
Sbjct: 188 YIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNC 244

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEWQNSGLITVKSDVYS 599
           L+ +    KISDFG+++           G     V+    + APE  N G  + +SDV+S
Sbjct: 245 LVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK----WTAPEALNYGRYSSESDVWS 300

Query: 600 FGVVLLEII-------CCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL 652
           FG++L E            SN +          L              +L  + V ++  
Sbjct: 301 FGILLWETFSLGASPYPNLSNQQTREFVEKGGRL-----------PCPELCPDAVFRLME 349

Query: 653 ERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP 687
           +        C   EP  RPS   +   L+   +  
Sbjct: 350 Q--------CWAYEPGQRPSFSTIYQELQSIRKRH 376

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  108 bits (271), Expect = 3e-25
 Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 4/125 (3%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
            +V E+MSKGSL D L     + L     V +A  +A G+ Y+     +  +H D++  N
Sbjct: 254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAAN 310

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 370

Query: 604 LLEII 608
           L E+ 
Sbjct: 371 LTELT 375

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  109 bits (275), Expect = 4e-25
 Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 15/131 (11%)

Query: 486 LVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E++   SL         + L   + +   L++   L YLH    + +++ D+K  NI
Sbjct: 161 IVMEYVGGQSLKRSK----GQKLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENI 213

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           ++ +  + K+ D G    +  N  G +    G+ G+ APE       TV +D+Y+ G  L
Sbjct: 214 MLTEE-QLKLIDLGAVSRI--NSFGYLY---GTPGFQAPE-IVRTGPTVATDIYTVGRTL 266

Query: 605 LEIICCRSNFE 615
             +        
Sbjct: 267 AALTLDLPTRN 277

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  108 bits (272), Expect = 5e-25
 Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 4/125 (3%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
            +V E+MSKGSL D L     + L     V +A  +A G+ Y+     +  +H D++  N
Sbjct: 337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAAN 393

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++
Sbjct: 394 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 453

Query: 604 LLEII 608
           L E+ 
Sbjct: 454 LTELT 458

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  107 bits (269), Expect = 1e-24
 Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
            ++ EFM+ G+L D L     + +     + +A  ++  + YL    +   IH ++  RN
Sbjct: 292 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARN 348

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
            L+ ++   K++DFGL++L+  +     AG +    + APE       ++KSDV++FGV+
Sbjct: 349 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 408

Query: 604 LLEII 608
           L EI 
Sbjct: 409 LWEIA 413

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  105 bits (264), Expect = 3e-24
 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 4/125 (3%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
            ++ EFM+KGSL D L + E         +  +  +A G+ ++    +   IH D++  N
Sbjct: 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAAN 314

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+  S   KI+DFGLA+++  N+     G +    + APE  N G  T+KSDV+SFG++
Sbjct: 315 ILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGIL 374

Query: 604 LLEII 608
           L+EI+
Sbjct: 375 LMEIV 379

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  101 bits (254), Expect = 8e-24
 Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 31/213 (14%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            L+ EF+  GSL + L   + +   + +++ A+ + +G+ YL      Q +H D+  RN+
Sbjct: 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNV 157

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS---RGYMAPEWQNSGLITVKSDVYSFG 601
           L++   + KI DFGL K +  ++               + APE        + SDV+SFG
Sbjct: 158 LVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVF-WYAPECLMQSKFYIASDVWSFG 216

Query: 602 VVLLEII-CCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE------------EVD 648
           V L E++  C S+       A  + +    +           ++E            EV 
Sbjct: 217 VTLHELLTYCDSDSS---PMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVY 273

Query: 649 KITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
           ++    M      C + +P+ R S +N+I   E
Sbjct: 274 QL----M----RKCWEFQPSNRTSFQNLIEGFE 298

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  100 bits (250), Expect = 2e-23
 Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 6/127 (4%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            ++  +M  G L   + + +  P  +D +   L VARG+ YL    E + +H D+  RN 
Sbjct: 99  HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNC 155

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+S+  K++DFGLA+ ++  +   V   R +R    + A E   +   T KSDV+SFG
Sbjct: 156 MLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFG 215

Query: 602 VVLLEII 608
           V+L E++
Sbjct: 216 VLLWELL 222

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  102 bits (255), Expect = 4e-23
 Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 8/124 (6%)

Query: 486 LVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+M+KGSL D L +     L     ++ +LDV   + YL        +H D+  RN+
Sbjct: 264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 320

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ +   AK+SDFGL K     Q      V+    + APE       + KSDV+SFG++L
Sbjct: 321 LVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEALREKKFSTKSDVWSFGILL 376

Query: 605 LEII 608
            EI 
Sbjct: 377 WEIY 380

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 98.5 bits (246), Expect = 7e-23
 Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 28/211 (13%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL      + IH D+  RNIL
Sbjct: 90  LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNIL 146

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS---RGYMAPEWQNSGLITVKSDVYSFGV 602
           +++  R KI DFGL K+L  ++        G      + APE       +V SDV+SFGV
Sbjct: 147 VENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGV 205

Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE------------EVDKI 650
           VL E+         +       ++        +     +L++             E+  I
Sbjct: 206 VLYELF-TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 264

Query: 651 TLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
               M      C  +  N RPS +++ L ++
Sbjct: 265 ----M----TECWNNNVNQRPSFRDLALRVD 287

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 99.0 bits (247), Expect = 8e-23
 Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 28/211 (13%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ E++  GSL D L   + R      ++    + +G+ YL      + IH D+  RNIL
Sbjct: 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNIL 177

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS---RGYMAPEWQNSGLITVKSDVYSFGV 602
           +++  R KI DFGL K+L  ++        G      + APE       +V SDV+SFGV
Sbjct: 178 VENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGV 236

Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE------------EVDKI 650
           VL E+         +       ++        +     +L++             E+  I
Sbjct: 237 VLYELF-TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 295

Query: 651 TLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
               M +    C  +  N RPS +++ L ++
Sbjct: 296 ----MTE----CWNNNVNQRPSFRDLALRVD 318

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 98.1 bits (245), Expect = 9e-23
 Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 18/143 (12%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            ++ E+M+ G L + L  +  R   +  + +  DV   + YL  +   Q +H D+  RN 
Sbjct: 95  FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNC 151

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAG----VRGSRGYMAPEWQNSGLITVKSDVYSF 600
           L++D    K+SDFGL++ ++ ++     G    VR    +  PE       + KSD+++F
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPPEVLMYSKFSSKSDIWAF 207

Query: 601 GVVLLEIICC-------RSNFEV 616
           GV++ EI           +N E 
Sbjct: 208 GVLMWEIYSLGKMPYERFTNSET 230

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 98.6 bits (246), Expect = 1e-22
 Identities = 55/234 (23%), Positives = 87/234 (37%), Gaps = 37/234 (15%)

Query: 464 FLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGL 523
            +               ++   LV E++  GSL D L            +  A  +  G+
Sbjct: 94  HIIKYKGC----CEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGM 147

Query: 524 LYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS---RGY 580
            YLH       IH D+  RN+L+D+    KI DFGLAK +            G      +
Sbjct: 148 AYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF-W 203

Query: 581 MAPEWQNSGLITVKSDVYSFGVVLLEII-CCRSNFEVNVSTADEVLLSTWVYNCFVAGEF 639
            APE          SDV+SFGV L E++  C S+        + + ++            
Sbjct: 204 YAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA---QGQMTVLRL 260

Query: 640 NKLVEE------------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
            +L+E             EV  +    M      C + E + RP+ +N+I +L+
Sbjct: 261 TELLERGERLPRPDKCPAEVYHL----M----KNCWETEASFRPTFENLIPILK 306

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 98.1 bits (245), Expect = 1e-22
 Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 35/197 (17%)

Query: 486 LVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV E++   +L++ +      PL     +     +  G+ + H   +++I+H DIK +NI
Sbjct: 88  LVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNI 142

Query: 545 LIDDSWRAKISDFGLAKLLMPN---QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFG 601
           LID +   KI DFG+AK L      QT  V    G+  Y +PE          +D+YS G
Sbjct: 143 LIDSNKTLKIFDFGIAKALSETSLTQTNHVL---GTVQYFSPEQAKGEATDECTDIYSIG 199

Query: 602 VVLLEIICCRSNF--EVNVSTA-----DEVLLSTWVYNCFVAGEFNKLVEEEVDKITLER 654
           +VL E++     F  E  VS A     D V          V  +  K + + +  + L  
Sbjct: 200 IVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN--------VTTDVRKDIPQSLSNVILRA 251

Query: 655 MVKTGLLCIQDEPNLRP 671
             K        +   R 
Sbjct: 252 TEK--------DKANRY 260

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 97.7 bits (244), Expect = 1e-22
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 12/129 (9%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
            ++ E+M  GSL D L       L     + +A  +A G+ ++ +      IH D++  N
Sbjct: 83  YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAAN 139

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAG----VRGSRGYMAPEWQNSGLITVKSDVYS 599
           IL+ D+   KI+DFGLA+L+  N+     G    ++    + APE  N G  T+KSDV+S
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK----WTAPEAINYGTFTIKSDVWS 195

Query: 600 FGVVLLEII 608
           FG++L EI+
Sbjct: 196 FGILLTEIV 204

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 98.1 bits (245), Expect = 1e-22
 Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 40/200 (20%)

Query: 486 LVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E++   +L D++      P+  +  + +  D  + L + H   +  IIH D+K  NI
Sbjct: 93  IVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANI 147

Query: 545 LIDDSWRAKISDFGLAKLLMPN-----QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
           +I  +   K+ DFG+A+ +  +     QT  V    G+  Y++PE      +  +SDVYS
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVI---GTAQYLSPEQARGDSVDARSDVYS 204

Query: 600 FGVVLLEIICCRSNF--EVNVSTA------DEVLLSTWVYNCFVAGEFNKLVEEEVDKIT 651
            G VL E++     F  +  VS A      D +  S            ++ +  ++D + 
Sbjct: 205 LGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS----------ARHEGLSADLDAVV 254

Query: 652 LERMVKTGLLCIQDEPNLRP 671
           L+ + K         P  R 
Sbjct: 255 LKALAK--------NPENRY 266

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 98.1 bits (245), Expect = 1e-22
 Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 7/127 (5%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++V E+M  GSL   L   + +      V +   V  G+ YL    ++  +H D+  RN+
Sbjct: 126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNV 182

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS---RGYMAPEWQNSGLITVKSDVYSFG 601
           L+D +   K+SDFGL+++L  +         G    R + APE       +  SDV+SFG
Sbjct: 183 LVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR-WTAPEAIAFRTFSSASDVWSFG 241

Query: 602 VVLLEII 608
           VV+ E++
Sbjct: 242 VVMWEVL 248

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 97.7 bits (244), Expect = 2e-22
 Identities = 41/127 (32%), Positives = 69/127 (54%), Gaps = 6/127 (4%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ YL      + +H D+  RN 
Sbjct: 103 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNC 159

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 160 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 219

Query: 602 VVLLEII 608
           V+L E++
Sbjct: 220 VLLWELM 226

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 97.8 bits (244), Expect = 2e-22
 Identities = 57/213 (26%), Positives = 86/213 (40%), Gaps = 33/213 (15%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV E++  G L D L     R      +  +  + +G+ YL      + +H D+  RNIL
Sbjct: 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 159

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS---RGYMAPEWQNSGLITVKSDVYSFGV 602
           ++     KI+DFGLAKLL  ++   V    G      + APE  +  + + +SDV+SFGV
Sbjct: 160 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF-WYAPESLSDNIFSRQSDVWSFGV 218

Query: 603 VLLEII--CCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE------------EVD 648
           VL E+   C +S                            +L+EE            EV 
Sbjct: 219 VLYELFTYCDKSCSPSAEFLRMMGCERDVPALS----RLLELLEEGQRLPAPPACPAEVH 274

Query: 649 KITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
           ++    M     LC    P  RPS   +   L+
Sbjct: 275 EL----M----KLCWAPSPQDRPSFSALGPQLD 299

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 96.1 bits (240), Expect = 3e-22
 Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 18/143 (12%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            LV EFM  G L+D L            + + LDV  G+ YL +     +IH D+  RN 
Sbjct: 79  CLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNC 135

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAG----VRGSRGYMAPEWQNSGLITVKSDVYSF 600
           L+ ++   K+SDFG+ + ++ +Q     G    V+    + +PE  +    + KSDV+SF
Sbjct: 136 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK----WASPEVFSFSRYSSKSDVWSF 191

Query: 601 GVVLLEIICC-------RSNFEV 616
           GV++ E+          RSN EV
Sbjct: 192 GVLMWEVFSEGKIPYENRSNSEV 214

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 96.6 bits (241), Expect = 3e-22
 Identities = 47/192 (24%), Positives = 73/192 (38%), Gaps = 32/192 (16%)

Query: 489 EFMSKGSLADLL--FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI 546
           E M+ G+L   L  F +    + R        + +GL +LH      IIH D+K  NI I
Sbjct: 109 ELMTSGTLKTYLKRFKVMKIKVLR---SWCRQILKGLQFLH-TRTPPIIHRDLKCDNIFI 164

Query: 547 D-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
              +   KI D GLA L   +       V G+  +MAPE           DVY+FG+ +L
Sbjct: 165 TGPTGSVKIGDLGLATLKRASFA---KAVIGTPEFMAPEMYEEKY-DESVDVYAFGMCML 220

Query: 606 EIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGL----- 660
           E+      +                  C  A +  + V   V   + +++    +     
Sbjct: 221 EMATSEYPY----------------SECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIE 264

Query: 661 LCIQDEPNLRPS 672
            CI+   + R S
Sbjct: 265 GCIRQNKDERYS 276

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 96.5 bits (241), Expect = 3e-22
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 7/127 (5%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +LV E    G L   L          +   +   V+ G+ YL    E   +H D+  RN+
Sbjct: 85  MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL---EEKNFVHRDLAARNV 141

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS---RGYMAPEWQNSGLITVKSDVYSFG 601
           L+ +   AKISDFGL+K L  + +   A   G    + + APE  N    + +SDV+S+G
Sbjct: 142 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK-WYAPECINFRKFSSRSDVWSYG 200

Query: 602 VVLLEII 608
           V + E +
Sbjct: 201 VTMWEAL 207

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 96.1 bits (240), Expect = 3e-22
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 11/128 (8%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            +V E++S G L + L +          + +  DV  G+ +L      Q IH D+  RN 
Sbjct: 79  YIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNC 135

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAG----VRGSRGYMAPEWQNSGLITVKSDVYSF 600
           L+D     K+SDFG+ + ++ +Q     G    V+    + APE  +    + KSDV++F
Sbjct: 136 LVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVK----WSAPEVFHYFKYSSKSDVWAF 191

Query: 601 GVVLLEII 608
           G+++ E+ 
Sbjct: 192 GILMWEVF 199

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 97.9 bits (244), Expect = 4e-22
 Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 6/127 (4%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+V  +M  G L + + N    P  +D +   L VA+G+ +L      + +H D+  RN 
Sbjct: 167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNC 223

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           ++D+ +  K++DFGLA+ +   +   V    G++    +MA E   +   T KSDV+SFG
Sbjct: 224 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 283

Query: 602 VVLLEII 608
           V+L E++
Sbjct: 284 VLLWELM 290

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 95.7 bits (239), Expect = 5e-22
 Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 13/129 (10%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            ++ E    G L   L   +        V  +L + + + YL     +  +H DI +RNI
Sbjct: 88  WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNI 144

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-----YMAPEWQNSGLITVKSDVYS 599
           L+      K+ DFGL++ +           + S       +M+PE  N    T  SDV+ 
Sbjct: 145 LVASPECVKLGDFGLSRYIEDEDY-----YKASVTRLPIKWMSPESINFRRFTTASDVWM 199

Query: 600 FGVVLLEII 608
           F V + EI+
Sbjct: 200 FAVCMWEIL 208

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 96.6 bits (241), Expect = 5e-22
 Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 13/130 (10%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +++ E+M  G+L   L   +        V +   +A G+ YL     +  +H D+  RNI
Sbjct: 122 MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNI 178

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG------YMAPEWQNSGLITVKSDVY 598
           L++ +   K+SDFGL+++L  +          + G      + APE  +    T  SDV+
Sbjct: 179 LVNSNLVCKVSDFGLSRVLEDDPEATYT----TSGGKIPIRWTAPEAISYRKFTSASDVW 234

Query: 599 SFGVVLLEII 608
           SFG+V+ E++
Sbjct: 235 SFGIVMWEVM 244

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 96.1 bits (240), Expect = 7e-22
 Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 14/129 (10%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ + M  G L D +   +     +  +   + +A+G+ YL    + +++H D+  RN+L
Sbjct: 93  LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 149

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG------YMAPEWQNSGLITVKSDVYS 599
           +      KI+DFGLAKLL   +         + G      +MA E     + T +SDV+S
Sbjct: 150 VKTPQHVKITDFGLAKLLGAEE-----KEYHAEGGKVPIKWMALESILHRIYTHQSDVWS 204

Query: 600 FGVVLLEII 608
           +GV + E++
Sbjct: 205 YGVTVWELM 213

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 95.4 bits (238), Expect = 7e-22
 Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 7/126 (5%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E    GSL D L   +   L     R A+ VA G+ YL      + IH D+  RN+L
Sbjct: 97  MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLL 153

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFGV 602
           +      KI DFGL + L  N    V      +    + APE   +   +  SD + FGV
Sbjct: 154 LATRDLVKIGDFGLMRALPQNDDHYVMQ-EHRKVPFAWCAPESLKTRTFSHASDTWMFGV 212

Query: 603 VLLEII 608
            L E+ 
Sbjct: 213 TLWEMF 218

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 95.9 bits (239), Expect = 1e-21
 Identities = 34/127 (26%), Positives = 68/127 (53%), Gaps = 8/127 (6%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            LV +++  GSL D +         +  +   + +A+G+ YL    E  ++H ++  RN+
Sbjct: 90  QLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNV 146

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR---GYMAPEWQNSGLITVKSDVYSFG 601
           L+    + +++DFG+A LL P+   ++     ++    +MA E  + G  T +SDV+S+G
Sbjct: 147 LLKSPSQVQVADFGVADLLPPDDKQLLY--SEAKTPIKWMALESIHFGKYTHQSDVWSYG 204

Query: 602 VVLLEII 608
           V + E++
Sbjct: 205 VTVWELM 211

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 95.9 bits (239), Expect = 1e-21
 Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 28/168 (16%)

Query: 468 LIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDR-------VRIALDVA 520
           L+ +S     K R    +++  FM  G L   L  L +R             VR  +D+A
Sbjct: 90  LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL--LASRIGENPFNLPLQTLVRFMVDIA 147

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VR 575
            G+ YL        IH D+  RN ++ +     ++DFGL++ +               V+
Sbjct: 148 CGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVK 204

Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII-------CCRSNFEV 616
               ++A E     L TV SDV++FGV + EI+           N E+
Sbjct: 205 ----WLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI 248

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 94.6 bits (236), Expect = 1e-21
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 13/129 (10%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            ++ E  + G L   L   +        +  A  ++  L YL      + +H DI  RN+
Sbjct: 91  WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNV 147

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-----YMAPEWQNSGLITVKSDVYS 599
           L+  +   K+ DFGL++ +  +        + S+G     +MAPE  N    T  SDV+ 
Sbjct: 148 LVSSNDCVKLGDFGLSRYMEDSTY-----YKASKGKLPIKWMAPESINFRRFTSASDVWM 202

Query: 600 FGVVLLEII 608
           FGV + EI+
Sbjct: 203 FGVCMWEIL 211

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 95.0 bits (237), Expect = 1e-21
 Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 12/129 (9%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
            ++ EFM+ G+L D L     + +     + +A  ++  + YL  +     IH D+  RN
Sbjct: 85  YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARN 141

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAG----VRGSRGYMAPEWQNSGLITVKSDVYS 599
            L+ ++   K++DFGL++L+  +     AG    ++    + APE       ++KSDV++
Sbjct: 142 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK----WTAPESLAYNKFSIKSDVWA 197

Query: 600 FGVVLLEII 608
           FGV+L EI 
Sbjct: 198 FGVLLWEIA 206

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 94.6 bits (236), Expect = 1e-21
 Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 8/124 (6%)

Query: 486 LVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+M+KGSL D L +     L     ++ +LDV   + YL        +H D+  RN+
Sbjct: 92  IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNV 148

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+ +   AK+SDFGL K     Q      V+    + APE       + KSDV+SFG++L
Sbjct: 149 LVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEALREKKFSTKSDVWSFGILL 204

Query: 605 LEII 608
            EI 
Sbjct: 205 WEIY 208

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 94.2 bits (235), Expect = 2e-21
 Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 8/127 (6%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +LV E    G L   L         ++ + +   V+ G+ YL  E E   +H D+  RN+
Sbjct: 93  MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYL--E-ESNFVHRDLAARNV 148

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS---RGYMAPEWQNSGLITVKSDVYSFG 601
           L+     AKISDFGL+K L  ++    A   G    + + APE  N    + KSDV+SFG
Sbjct: 149 LLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK-WYAPECINYYKFSSKSDVWSFG 207

Query: 602 VVLLEII 608
           V++ E  
Sbjct: 208 VLMWEAF 214

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 94.6 bits (236), Expect = 2e-21
 Identities = 35/125 (28%), Positives = 50/125 (40%), Gaps = 12/125 (9%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDR-VRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +    ++   LA +L      PL   R V I   +   L   H        H D+K  NI
Sbjct: 111 VDMRLINGVDLAAML--RRQGPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENI 165

Query: 545 LIDDSWRAKISDFGLAKLLMPN---QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFG 601
           L+     A + DFG+A         Q G      G+  YMAPE  +    T ++D+Y+  
Sbjct: 166 LVSADDFAYLVDFGIASATTDEKLTQLGNTV---GTLYYMAPERFSESHATYRADIYALT 222

Query: 602 VVLLE 606
            VL E
Sbjct: 223 CVLYE 227

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 94.9 bits (236), Expect = 2e-21
 Identities = 44/217 (20%), Positives = 82/217 (37%), Gaps = 34/217 (15%)

Query: 477 YKHRSSKKLLVY---EFMSKGSLADLL--FNLETRPLWRDRVRIALDVARGLLYLHDECE 531
               SS K+ +Y   +   K +L D +              + I + +A  + +LH +  
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK-- 183

Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLL-----------MPNQTGIVAGVRGSRGY 580
             ++H D+K  NI        K+ DFGL   +                    G  G++ Y
Sbjct: 184 -GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242

Query: 581 MAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFN 640
           M+PE  +    + K D++S G++L E++        + ST  E +    +       +F 
Sbjct: 243 MSPEQIHGNNYSHKVDIFSLGLILFELLY-------SFSTQMERVR---IITDVRNLKFP 292

Query: 641 KLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
            L  ++  +     MV+     +   P  RP   ++I
Sbjct: 293 LLFTQKYPQ--EHMMVQ---DMLSPSPTERPEATDII 324

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 95.5 bits (238), Expect = 2e-21
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 7/127 (5%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++V E+M  GSL   L   + +      V +   +A G+ YL D      +H D+  RNI
Sbjct: 122 MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNI 178

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS---RGYMAPEWQNSGLITVKSDVYSFG 601
           LI+ +   K+SDFGL ++L  +         G    R + +PE       T  SDV+S+G
Sbjct: 179 LINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR-WTSPEAIAYRKFTSASDVWSYG 237

Query: 602 VVLLEII 608
           +VL E++
Sbjct: 238 IVLWEVM 244

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 96.9 bits (241), Expect = 4e-21
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 7/127 (5%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +LV E    G L   L          +   +   V+ G+ YL    E   +H ++  RN+
Sbjct: 411 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL---EEKNFVHRNLAARNV 467

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS---RGYMAPEWQNSGLITVKSDVYSFG 601
           L+ +   AKISDFGL+K L  + +   A   G    + + APE  N    + +SDV+S+G
Sbjct: 468 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK-WYAPECINFRKFSSRSDVWSYG 526

Query: 602 VVLLEII 608
           V + E +
Sbjct: 527 VTMWEAL 533

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 93.1 bits (232), Expect = 6e-21
 Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 24/149 (16%)

Query: 485 LLVYEFMSKGSLADLL-----FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +++  FM  G L   L              +  ++  +D+A G+ YL        +H D+
Sbjct: 117 MVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDL 173

Query: 540 KLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEWQNSGLITVK 594
             RN ++ D     ++DFGL+K +               V+    ++A E     + T K
Sbjct: 174 AARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK----WIAIESLADRVYTSK 229

Query: 595 SDVYSFGVVLLEII-------CCRSNFEV 616
           SDV++FGV + EI            N E+
Sbjct: 230 SDVWAFGVTMWEIATRGMTPYPGVQNHEM 258

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 93.2 bits (232), Expect = 7e-21
 Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 14/129 (10%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ + M  G L D +   +     +  +   + +A+G+ YL    + +++H D+  RN+L
Sbjct: 93  LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVL 149

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG------YMAPEWQNSGLITVKSDVYS 599
           +      KI+DFGLAKLL   +         + G      +MA E     + T +SDV+S
Sbjct: 150 VKTPQHVKITDFGLAKLLGAEE-----KEYHAEGGKVPIKWMALESILHRIYTHQSDVWS 204

Query: 600 FGVVLLEII 608
           +GV + E++
Sbjct: 205 YGVTVWELM 213

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 93.5 bits (233), Expect = 8e-21
 Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 25/142 (17%)

Query: 485 LLVYEFMSKGSLADLL------------FNLETRPL-WRDRVRIALDVARGLLYLHDECE 531
           L++ E+   G L + L            F +       RD +  +  VA+G+ +L     
Sbjct: 126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---S 182

Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEWQ 586
              IH D+  RN+L+ +   AKI DFGLA+ +M +   IV G     V+    +MAPE  
Sbjct: 183 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK----WMAPESI 238

Query: 587 NSGLITVKSDVYSFGVVLLEII 608
              + TV+SDV+S+G++L EI 
Sbjct: 239 FDCVYTVQSDVWSYGILLWEIF 260

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 91.6 bits (228), Expect = 1e-20
 Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 8/131 (6%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +  EF  KG+L   +       L +     +   + +G+ Y+H +   ++I+ D+K  NI
Sbjct: 97  IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNI 153

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGVV 603
            + D+ + KI DFGL   L     G     +G+  YM+PE   +      + D+Y+ G++
Sbjct: 154 FLVDTKQVKIGDFGLVTSL--KNDGKRTRSKGTLRYMSPEQISSQD-YGKEVDLYALGLI 210

Query: 604 LLEIICCRSNF 614
           L E++      
Sbjct: 211 LAELLHVCDTA 221

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 94.1 bits (234), Expect = 2e-20
 Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 14/134 (10%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +  E  +  +L + +   +   L  + + +      GL +LH    + I+H D+K  NIL
Sbjct: 95  IAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNIL 150

Query: 546 I-----DDSWRAKISDFGLAKLLMPNQ--TGIVAGVRGSRGYMAPE---WQNSGLITVKS 595
           I         +A ISDFGL K L   +      +GV G+ G++APE          T   
Sbjct: 151 ISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTV 210

Query: 596 DVYSFGVVLLEIIC 609
           D++S G V   +I 
Sbjct: 211 DIFSAGCVFYYVIS 224

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 92.0 bits (229), Expect = 2e-20
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 27/144 (18%)

Query: 485 LLVYEFMSKGSLADLL--------------FNLETRPL-WRDRVRIALDVARGLLYLHDE 529
            ++ E+ SKG+L + L                +    + ++D V     +ARG+ YL   
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA-- 174

Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPE 584
              + IH D+  RN+L+ ++   KI+DFGLA+ +               V+    +MAPE
Sbjct: 175 -SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK----WMAPE 229

Query: 585 WQNSGLITVKSDVYSFGVVLLEII 608
                + T +SDV+SFGV++ EI 
Sbjct: 230 ALFDRVYTHQSDVWSFGVLMWEIF 253

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 92.4 bits (230), Expect = 3e-20
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 27/144 (18%)

Query: 485 LLVYEFMSKGSLADLL-----------FNLETRPLW----RDRVRIALDVARGLLYLHDE 529
            ++ E+ SKG+L + L           +N    P      +D V  A  VARG+ YL   
Sbjct: 151 YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA-- 208

Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPE 584
              + IH D+  RN+L+ +    KI+DFGLA+ +               V+    +MAPE
Sbjct: 209 -SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK----WMAPE 263

Query: 585 WQNSGLITVKSDVYSFGVVLLEII 608
                + T +SDV+SFGV+L EI 
Sbjct: 264 ALFDRIYTHQSDVWSFGVLLWEIF 287

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 92.4 bits (230), Expect = 3e-20
 Identities = 50/231 (21%), Positives = 89/231 (38%), Gaps = 59/231 (25%)

Query: 485 LLVYEFMSKGSLADLL--------------FNLETRPL-WRDRVRIALDVARGLLYLHDE 529
            ++ E+ SKG+L + L                +    + ++D V     +ARG+ YL   
Sbjct: 163 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA-- 220

Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPE 584
              + IH D+  RN+L+ ++   KI+DFGLA+ +               V+    +MAPE
Sbjct: 221 -SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK----WMAPE 275

Query: 585 WQNSGLITVKSDVYSFGVVLLEII-------CCRSNFEVNVSTADEVLLSTWVYNCFVAG 637
                + T +SDV+SFGV++ EI              E              ++     G
Sbjct: 276 ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------------LFKLLKEG 321

Query: 638 ---EFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME 685
              +       E+  +  +        C    P+ RP+ K ++  L+  + 
Sbjct: 322 HRMDKPANCTNELYMMMRD--------CWHAVPSQRPTFKQLVEDLDRILT 364

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 91.2 bits (227), Expect = 3e-20
 Identities = 37/118 (31%), Positives = 50/118 (42%), Gaps = 10/118 (8%)

Query: 494 GSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRA 552
            SL           L   +V     D    L +LH +    ++H D+K  NI +    R 
Sbjct: 141 PSLQQHC-EAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRC 196

Query: 553 KISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGVVLLEIIC 609
           K+ DFGL   L     G V    G   YMAPE  Q S      +DV+S G+ +LE+ C
Sbjct: 197 KLGDFGLLVELGTAGAGEV--QEGDPRYMAPELLQGS--YGTAADVFSLGLTILEVAC 250

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 91.2 bits (227), Expect = 3e-20
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 31/146 (21%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLW-----------------RDRVRIALDVARGLLYLH 527
           +++ EF   G+L+  L     R  +                    +  +  VA+G+ +L 
Sbjct: 108 MVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 165

Query: 528 DECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMA 582
                + IH D+  RNIL+ +    KI DFGLA+ +  +   +  G     ++    +MA
Sbjct: 166 ---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK----WMA 218

Query: 583 PEWQNSGLITVKSDVYSFGVVLLEII 608
           PE     + T++SDV+SFGV+L EI 
Sbjct: 219 PETIFDRVYTIQSDVWSFGVLLWEIF 244

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 90.4 bits (225), Expect = 3e-20
 Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 24/148 (16%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +LV EF+  GSL   L   +       ++ +A  +A  + +L +     +IH ++  +NI
Sbjct: 88  ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNI 144

Query: 545 LIDDSWR--------AKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKS 595
           L+              K+SD G++  ++P        +     ++ PE  +N   + + +
Sbjct: 145 LLIREEDRKTGNPPFIKLSDPGISITVLPKDIL-QERIP----WVPPECIENPKNLNLAT 199

Query: 596 DVYSFGVVLLEIICC-------RSNFEV 616
           D +SFG  L EI            +   
Sbjct: 200 DKWSFGTTLWEICSGGDKPLSALDSQRK 227

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 90.8 bits (226), Expect = 4e-20
 Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 33/199 (16%)

Query: 489 EFMSKGSLADLL--FNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           E    G L+ ++  F  + R +    V +  + +   L ++H     +++H DIK  N+ 
Sbjct: 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVF 168

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSDVYSFGVVL 604
           I  +   K+ D GL +    ++T     + G+  YM+PE    +G    KSD++S G +L
Sbjct: 169 ITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLL 226

Query: 605 LEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI-------TLERMVK 657
            E+   +S F  +      +                K+ + +   +        L ++V 
Sbjct: 227 YEMAALQSPFYGDKMNLYSL--------------CKKIEQCDYPPLPSDHYSEELRQLVN 272

Query: 658 TGLLCIQDEPNLRPSMKNV 676
              +CI  +P  RP +  V
Sbjct: 273 ---MCINPDPEKRPDVTYV 288

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 91.2 bits (227), Expect = 4e-20
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 28/153 (18%)

Query: 485 LLVYEFMSKGSLADLL---------FNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           L++ E M++G L   L           +   P     +++A ++A G+ YL+     + +
Sbjct: 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFV 160

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEWQNSGL 590
           H D+  RN ++ + +  KI DFG+ + +         G     VR    +M+PE    G+
Sbjct: 161 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR----WMSPESLKDGV 216

Query: 591 ITVKSDVYSFGVVLLEII-------CCRSNFEV 616
            T  SDV+SFGVVL EI           SN +V
Sbjct: 217 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 249

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 90.4 bits (225), Expect = 5e-20
 Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 29/146 (19%)

Query: 485 LLVYEFMSKGSLADLL-----------------FNLETRPLWRDRVRIALDVARGLLYLH 527
           L++ E+   G L + L                  + E      D +  +  VA+G+ +L 
Sbjct: 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA 162

Query: 528 DECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMA 582
                  IH D+  RNIL+      KI DFGLA+ +  +   +V G     V+    +MA
Sbjct: 163 ---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK----WMA 215

Query: 583 PEWQNSGLITVKSDVYSFGVVLLEII 608
           PE   + + T +SDV+S+G+ L E+ 
Sbjct: 216 PESIFNCVYTFESDVWSYGIFLWELF 241

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 93.4 bits (232), Expect = 6e-20
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 13/129 (10%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            ++ E  + G L   L   +        +  A  ++  L YL      + +H DI  RN+
Sbjct: 466 WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNV 522

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG-----YMAPEWQNSGLITVKSDVYS 599
           L+  +   K+ DFGL++ +  +        + S+G     +MAPE  N    T  SDV+ 
Sbjct: 523 LVSSNDCVKLGDFGLSRYMEDSTY-----YKASKGKLPIKWMAPESINFRRFTSASDVWM 577

Query: 600 FGVVLLEII 608
           FGV + EI+
Sbjct: 578 FGVCMWEIL 586

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 89.7 bits (223), Expect = 9e-20
 Identities = 48/216 (22%), Positives = 80/216 (37%), Gaps = 36/216 (16%)

Query: 479 HRSSKKLLVY---EFMSKGSLADLLFNLETRPLWRDRV--RIALDVARGLLYLHDECEVQ 533
             SS K+ +Y   +   K +L D +    T       V   I L +A  + +LH +    
Sbjct: 82  QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---G 138

Query: 534 IIHCDIKLRNILIDDSWRAKISDFGLAKLL-----------MPNQTGIVAGVRGSRGYMA 582
           ++H D+K  NI        K+ DFGL   +                    G  G++ YM+
Sbjct: 139 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMS 198

Query: 583 PE-WQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNK 641
           PE    +   + K D++S G++L E++     F     T  E +            +F  
Sbjct: 199 PEQIHGNS-YSHKVDIFSLGLILFELLY---PFS----TQMERVR---TLTDVRNLKFPP 247

Query: 642 LVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
           L  ++        MV+     +   P  RP   N+I
Sbjct: 248 LFTQKYPC--EYVMVQ---DMLSPSPMERPEAINII 278

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 89.3 bits (222), Expect = 1e-19
 Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 24/148 (16%)

Query: 480 RSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIA---LDVARGLLYLHDECEVQII 535
           +    L +  E+   G+L DL+    +  L + R         +   L Y+H +    II
Sbjct: 85  KKKSTLFIQMEYCENGTLYDLI---HSENLNQQRDEYWRLFRQILEALSYIHSQ---GII 138

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-------------GSRGYMA 582
           H D+K  NI ID+S   KI DFGLAK +  +   +    +             G+  Y+A
Sbjct: 139 HRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVA 198

Query: 583 PE-WQNSGLITVKSDVYSFGVVLLEIIC 609
            E    +G    K D+YS G++  E+I 
Sbjct: 199 TEVLDGTGHYNEKIDMYSLGIIFFEMIY 226

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 90.5 bits (224), Expect = 1e-19
 Identities = 27/141 (19%), Positives = 54/141 (38%), Gaps = 24/141 (17%)

Query: 485 LLVYEFM--SKGSLADLLFNLETR---PLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
             +Y  M  +  +  ++L +  +     +   R+++ L V R L  LH      ++H  +
Sbjct: 176 FFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYL 232

Query: 540 KLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW-----------QNS 588
           +  +I++D      ++ F         + G       SRG+  PE               
Sbjct: 233 RPVDIVLDQRGGVFLTGFEHLV-----RDGARVVSSVSRGFEPPELEARRATISYHRDRR 287

Query: 589 GLITVKSDVYSFGVVLLEIIC 609
            L+T   D ++ G+V+  I C
Sbjct: 288 TLMTFSFDAWALGLVIYWIWC 308

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 90.1 bits (223), Expect = 1e-19
 Identities = 20/147 (13%), Positives = 41/147 (27%), Gaps = 16/147 (10%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWR------DRVRIALDVARGLLYLHDECEVQIIHCD 538
           LL+    S   L  L   L+   ++R          +   + R    L  +    ++H  
Sbjct: 164 LLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKG---LVHGH 219

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW--QNSGLITVKSD 596
               N+ I    R  + D      +                Y   E+   ++   T   +
Sbjct: 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGPASS----VPVTYAPREFLNASTATFTHALN 275

Query: 597 VYSFGVVLLEIICCRSNFEVNVSTADE 623
            +  G+ +  + C    F +       
Sbjct: 276 AWQLGLSIYRVWCLFLPFGLVTPGIKG 302

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 90.5 bits (224), Expect = 2e-19
 Identities = 22/136 (16%), Positives = 46/136 (33%), Gaps = 15/136 (11%)

Query: 485 LLVYEFMSKGSLADLLFNLETR------PLWRDRVRIALDVARGLLYLHDECEVQIIHCD 538
             +Y  M   +L      L +        +   R+++ L V R L  LH      ++H  
Sbjct: 181 FFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTY 236

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW-----QNSGLITV 593
           ++  +I++D      ++ F        +    +          A         +  L+T 
Sbjct: 237 LRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTF 296

Query: 594 KSDVYSFGVVLLEIIC 609
             D ++ G+ +  I C
Sbjct: 297 AFDTWTLGLAIYWIWC 312

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 89.0 bits (221), Expect = 2e-19
 Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 13/125 (10%)

Query: 489 EFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNILID 547
           E +  GSL  L+   +   L  DR          GL YLH     +I+H D+K  N+L+ 
Sbjct: 130 ELLEGGSLGQLI--KQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLS 184

Query: 548 -DSWRAKISDFGLAKLLMPNQTGIVAGVRGS-RG---YMAPE-WQNSGLITVKSDVYSFG 601
            D  RA + DFG A  L P+  G          G   +MAPE          K D++S  
Sbjct: 185 SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSSC 243

Query: 602 VVLLE 606
            ++L 
Sbjct: 244 CMMLH 248

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 88.6 bits (220), Expect = 2e-19
 Identities = 45/235 (19%), Positives = 86/235 (36%), Gaps = 43/235 (18%)

Query: 485 LLVYEFMSKGSLADLLFNLETR--PLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKL 541
            L+  F  +G+L + +  L+ +   L  D++  + L + RGL  +H +      H D+K 
Sbjct: 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKP 162

Query: 542 RNILIDDSWRAKISDFGLAKLLMP--------NQTGIVAGVRGSRGYMAPE-WQNSG--L 590
            NIL+ D  +  + D G                     A  R +  Y APE +      +
Sbjct: 163 TNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCV 222

Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL-----STWVYNCFVAGEFNKLVEE 645
           I  ++DV+S G VL  ++     +++     D V L      +   +   +    +L+  
Sbjct: 223 IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNS 282

Query: 646 EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFPPLSHVNSL 700
                            +  +P+ RP +  ++  LE      +    P  H   +
Sbjct: 283 ----------------MMTVDPHQRPHIPLLLSQLEA-----LQPPAPGQHTTQI 316

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 88.0 bits (219), Expect = 2e-19
 Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 34/159 (21%)

Query: 485 LLVYEFMSKGSLADLL---------------FNLETRPLWRDRVRIALDVARGLLYLHDE 529
            +++ + S G L + L                 +++     D V +   +A G+ YL   
Sbjct: 88  SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS-- 145

Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPE 584
               ++H D+  RN+L+ D    KISD GL + +       + G     +R    +MAPE
Sbjct: 146 -SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR----WMAPE 200

Query: 585 WQNSGLITVKSDVYSFGVVLLEII-------CCRSNFEV 616
               G  ++ SD++S+GVVL E+        C  SN +V
Sbjct: 201 AIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 239

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 88.1 bits (219), Expect = 3e-19
 Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 34/159 (21%)

Query: 485 LLVYEFMSKGSLADLL--------------FNLETRPL-WRDRVRIALDVARGLLYLHDE 529
           ++V+E+M  G L   L                     L     + IA  +A G++YL   
Sbjct: 93  IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA-- 150

Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPE 584
                +H D+  RN L+  +   KI DFG+++ +       V G     +R    +M PE
Sbjct: 151 -SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR----WMPPE 205

Query: 585 WQNSGLITVKSDVYSFGVVLLEII-------CCRSNFEV 616
                  T +SDV+SFGV+L EI           SN EV
Sbjct: 206 SIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 244

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 87.7 bits (218), Expect = 3e-19
 Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 9/123 (7%)

Query: 489 EFMSKGSLADLLFNLETRPLWRDRV--RIALDVARGLLYLHDECEVQIIHCDIKLRNILI 546
           E +  GSL+ LL +        ++        +  GL YLHD    QI+H DIK  N+LI
Sbjct: 99  EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLI 155

Query: 547 D-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE--WQNSGLITVKSDVYSFGVV 603
           +  S   KISDFG +K L            G+  YMAPE   +        +D++S G  
Sbjct: 156 NTYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCT 214

Query: 604 LLE 606
           ++E
Sbjct: 215 IIE 217

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 88.5 bits (220), Expect = 3e-19
 Identities = 47/140 (33%), Positives = 63/140 (45%), Gaps = 25/140 (17%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLW--------RDRVRIALDVARGLLYLHDECEVQIIH 536
            ++ E M+ G L   L   ETRP           D + +A D+A G  YL    E   IH
Sbjct: 109 FILMELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIH 163

Query: 537 CDIKLRNILIDDSWR---AKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEWQNS 588
            DI  RN L+        AKI DFG+A+ +         G     V+    +M PE    
Sbjct: 164 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK----WMPPEAFME 219

Query: 589 GLITVKSDVYSFGVVLLEII 608
           G+ T K+D +SFGV+L EI 
Sbjct: 220 GIFTSKTDTWSFGVLLWEIF 239

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 87.7 bits (218), Expect = 4e-19
 Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 39/154 (25%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLW-------------------------RDRVRIALDV 519
           LL+ E+   GSL   L   E+R +                           D +  A  +
Sbjct: 102 LLIVEYAKYGSLRGFL--RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQI 159

Query: 520 ARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRG 579
           ++G+ YL    E++++H D+  RNIL+ +  + KISDFGL++ +    +     V+ S+G
Sbjct: 160 SQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS----YVKRSQG 212

Query: 580 -----YMAPEWQNSGLITVKSDVYSFGVVLLEII 608
                +MA E     + T +SDV+SFGV+L EI+
Sbjct: 213 RIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 87.4 bits (217), Expect = 8e-19
 Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 33/158 (20%)

Query: 485 LLVYEFMSKGSLADLL-------------FNLETRPL-WRDRVRIALDVARGLLYLHDEC 530
           L+V+E+M  G L   L              ++   PL     + +A  VA G++YL    
Sbjct: 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA--- 175

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEW 585
            +  +H D+  RN L+      KI DFG+++ +       V G     +R    +M PE 
Sbjct: 176 GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR----WMPPES 231

Query: 586 QNSGLITVKSDVYSFGVVLLEII-------CCRSNFEV 616
                 T +SDV+SFGVVL EI           SN E 
Sbjct: 232 ILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA 269

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 87.6 bits (217), Expect = 9e-19
 Identities = 36/120 (30%), Positives = 66/120 (55%), Gaps = 8/120 (6%)

Query: 489 EFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNILID 547
           E M  GSL  +L   +   +    + ++++ V +GL YL ++   +I+H D+K  NIL++
Sbjct: 111 EHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVN 166

Query: 548 DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI 607
                K+ DFG++  L+ +         G+R YM+PE       +V+SD++S G+ L+E+
Sbjct: 167 SRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 223

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 87.1 bits (216), Expect = 1e-18
 Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 19/152 (12%)

Query: 481 SSKKLLVYEFMSKGSLADLLFNLETR-PLWRDRV-RIALDVARGLLYLHDECEVQIIHCD 538
              + L+   + KG L + L  +E+R PL  D V +I     R + ++H   +  IIH D
Sbjct: 105 GQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR-QKPPIIHRD 163

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----------VRGSRGYMAPE--- 584
           +K+ N+L+ +    K+ DFG A  +        +               +  Y  PE   
Sbjct: 164 LKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIID 223

Query: 585 -WQNSGLITVKSDVYSFGVVLLEIICCRSNFE 615
            + N   I  K D+++ G +L  +   +  FE
Sbjct: 224 LYSNFP-IGEKQDIWALGCILYLLCFRQHPFE 254

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 86.7 bits (215), Expect = 2e-18
 Identities = 47/140 (33%), Positives = 63/140 (45%), Gaps = 25/140 (17%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLW--------RDRVRIALDVARGLLYLHDECEVQIIH 536
            ++ E M+ G L   L   ETRP           D + +A D+A G  YL    E   IH
Sbjct: 150 FILLELMAGGDLKSFL--RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIH 204

Query: 537 CDIKLRNILIDDSWR---AKISDFGLAKLLMPNQTGIVAG-----VRGSRGYMAPEWQNS 588
            DI  RN L+        AKI DFG+A+ +         G     V+    +M PE    
Sbjct: 205 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK----WMPPEAFME 260

Query: 589 GLITVKSDVYSFGVVLLEII 608
           G+ T K+D +SFGV+L EI 
Sbjct: 261 GIFTSKTDTWSFGVLLWEIF 280

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 85.8 bits (213), Expect = 2e-18
 Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 18/138 (13%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E      L   L   ++   W  +     ++   +  +H      I+H D+K  N L
Sbjct: 105 MVMEC-GNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIHQH---GIVHSDLKPANFL 159

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPE-----------WQNSGLITV 593
           I D    K+ DFG+A  + P+ T +V     G+  YM PE            ++   I+ 
Sbjct: 160 IVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 218

Query: 594 KSDVYSFGVVLLEIICCR 611
           KSDV+S G +L  +   +
Sbjct: 219 KSDVWSLGCILYYMTYGK 236

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 86.3 bits (214), Expect = 2e-18
 Identities = 44/196 (22%), Positives = 79/196 (40%), Gaps = 34/196 (17%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V ++   G L   +   +      D++    + +   L ++HD    +I+H DIK +NI
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNI 156

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPE-WQNSGLITVKSDVYSFGV 602
            +      ++ DFG+A++L  N T  +A    G+  Y++PE  +N      KSD+++ G 
Sbjct: 157 FLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPEICENKP-YNNKSDIWALGC 213

Query: 603 VLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI------TLERMV 656
           VL E+   +  FE          L              K++      +       L  +V
Sbjct: 214 VLYELCTLKHAFE----AGSMKNL------------VLKIISGSFPPVSLHYSYDLRSLV 257

Query: 657 KTGLLCIQDEPNLRPS 672
                  +  P  RPS
Sbjct: 258 S---QLFKRNPRDRPS 270

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 86.3 bits (214), Expect = 2e-18
 Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 18/138 (13%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E      L   L   ++   W  +     ++   +  +H      I+H D+K  N L
Sbjct: 86  MVMEC-GNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIHQH---GIVHSDLKPANFL 140

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPE-----------WQNSGLITV 593
           I D    K+ DFG+A  + P+ T +V     G+  YM PE            ++   I+ 
Sbjct: 141 IVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 199

Query: 594 KSDVYSFGVVLLEIICCR 611
           KSDV+S G +L  +   +
Sbjct: 200 KSDVWSLGCILYYMTYGK 217

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 85.8 bits (213), Expect = 2e-18
 Identities = 48/151 (31%), Positives = 66/151 (43%), Gaps = 44/151 (29%)

Query: 485 LLVYEFMSKGSLADLL--------------FNLETRPL-WRDRVRIALDVARGLLYLHDE 529
            L  E+   G+L D L               N     L  +  +  A DVARG+ YL   
Sbjct: 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL--- 158

Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGY--------- 580
            + Q IH D+  RNIL+ +++ AKI+DFGL+              RG   Y         
Sbjct: 159 SQKQFIHRDLAARNILVGENYVAKIADFGLS--------------RGQEVYVKKTMGRLP 204

Query: 581 ---MAPEWQNSGLITVKSDVYSFGVVLLEII 608
              MA E  N  + T  SDV+S+GV+L EI+
Sbjct: 205 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 86.0 bits (213), Expect = 4e-18
 Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 18/138 (13%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E      L   L   ++   W  +     ++   +  +H      I+H D+K  N L
Sbjct: 133 MVMEC-GNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIHQH---GIVHSDLKPANFL 187

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPE-----------WQNSGLITV 593
           I D    K+ DFG+A  + P+ T +V     G+  YM PE            ++   I+ 
Sbjct: 188 IVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISP 246

Query: 594 KSDVYSFGVVLLEIICCR 611
           KSDV+S G +L  +   +
Sbjct: 247 KSDVWSLGCILYYMTYGK 264

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 85.0 bits (211), Expect = 5e-18
 Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 34/151 (22%)

Query: 485 LLVYEFMSKGSLADLL---------------------FNLETRPL-WRDRVRIALDVARG 522
            L++E+   G L + L                        +   L + D +  A  VA+G
Sbjct: 125 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKG 184

Query: 523 LLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-----VRGS 577
           + +L        +H D+  RN+L+      KI DFGLA+ +M +   +V G     V+  
Sbjct: 185 MEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK-- 239

Query: 578 RGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
             +MAPE    G+ T+KSDV+S+G++L EI 
Sbjct: 240 --WMAPESLFEGIYTIKSDVWSYGILLWEIF 268

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 85.4 bits (211), Expect = 5e-18
 Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 26/217 (11%)

Query: 398 GACSKHKFPLMFATKDQYASAILFIKWSSGQANLSTHRIAPPIGNDKVNDKRKLLTVLAG 457
           GAC+K   PLM   +        F K+ +    L + R        K    R+    +  
Sbjct: 93  GACTKPGGPLMVIVE--------FCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGA 144

Query: 458 CLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPL-WRDRVRIA 516
               +        + S+   +  +S   +  + +S     +   +L    L     +  +
Sbjct: 145 IPVDLK-----RRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYS 199

Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG--- 573
             VA+G+ +L      + IH D+  RNIL+ +    KI DFGLA+ +  +   +  G   
Sbjct: 200 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256

Query: 574 --VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEII 608
             ++    +MAPE     + T++SDV+SFGV+L EI 
Sbjct: 257 LPLK----WMAPETIFDRVYTIQSDVWSFGVLLWEIF 289

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 83.9 bits (208), Expect = 5e-18
 Identities = 38/213 (17%), Positives = 71/213 (33%), Gaps = 59/213 (27%)

Query: 489 EFMSKGSLADLL--FNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           E+ + GSLAD +              ++ + L V RGL Y+H      ++H DIK  NI 
Sbjct: 91  EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIF 147

Query: 546 ID-------------------DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-W 585
           I                    +    KI D G    +   Q        G   ++A E  
Sbjct: 148 ISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV-----EEGDSRFLANEVL 202

Query: 586 QNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE 645
           Q +     K+D+++  + ++                                +++++ + 
Sbjct: 203 QENYTHLPKADIFALALTVVCAAGAEPLP-------------------RNGDQWHEIRQG 243

Query: 646 EVDKIT------LERMVKTGLLCIQDEPNLRPS 672
            + +I          ++K   + I  +P  RPS
Sbjct: 244 RLPRIPQVLSQEFTELLK---VMIHPDPERRPS 273

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 83.9 bits (208), Expect = 1e-17
 Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 42/167 (25%)

Query: 485 LLVYEFMSKGSLADLL----------------------FNLETRPL-WRDRVRIALDVAR 521
            L++E+M+ G L + L                       +    PL   +++ IA  VA 
Sbjct: 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAA 185

Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGY- 580
           G+ YL    E + +H D+  RN L+ ++   KI+DFGL++ +                  
Sbjct: 186 GMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY----YKADGNDAI 238

Query: 581 ----MAPEWQNSGLITVKSDVYSFGVVLLEII-------CCRSNFEV 616
               M PE       T +SDV+++GVVL EI           ++ EV
Sbjct: 239 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 285

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 82.3 bits (204), Expect = 2e-17
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 24/132 (18%)

Query: 489 EFMSKGSLADLLFNLETRPLWRDRV------RIALDVARGLLYLHDECEVQIIHCDIKLR 542
           E M   SL      +  +      +      +IA+ + + L +LH +  + +IH D+K  
Sbjct: 86  ELMD-TSLDKFYKQVIDKG---QTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPS 139

Query: 543 NILIDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKS 595
           N+LI+   + K+ DFG++  L   +           G + YMAPE      N    +VKS
Sbjct: 140 NVLINALGQVKMCDFGISGYLVDDVAKDIDA-----GCKPYMAPERINPELNQKGYSVKS 194

Query: 596 DVYSFGVVLLEI 607
           D++S G+ ++E+
Sbjct: 195 DIWSLGITMIEL 206

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 84.1 bits (208), Expect = 3e-17
 Identities = 50/221 (22%), Positives = 84/221 (38%), Gaps = 43/221 (19%)

Query: 486 LVYEFMSKGSLADLL------FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           +  E  +  +L DL+                + + +   +A G+ +LH    ++IIH D+
Sbjct: 86  IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDL 141

Query: 540 KLRNILID-------------DSWRAKISDFGLAKLLMPNQTGIVAGVR---GSRGYMAP 583
           K +NIL+              ++ R  ISDFGL K L   Q+     +    G+ G+ AP
Sbjct: 142 KPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAP 201

Query: 584 E-------WQNSGLITVKSDVYSFGVVLLEIICCRSN-FEVNVSTADEVLLSTWVYNCFV 635
           E        Q    +T   D++S G V   I+    + F    S    ++   +  +   
Sbjct: 202 ELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMK 261

Query: 636 AGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNV 676
                 L+ E  D I   +M       I  +P  RP+   V
Sbjct: 262 CLHDRSLIAEATDLI--SQM-------IDHDPLKRPTAMKV 293

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 83.1 bits (205), Expect = 3e-17
 Identities = 26/162 (16%), Positives = 58/162 (35%), Gaps = 28/162 (17%)

Query: 467 FLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRD-----RVRIALDVAR 521
             +   S  ++++ S   +LV E  S G+L + + NL      +       +  A+ +  
Sbjct: 128 MFMKFYSAHLFQNGS---VLVGELYSYGTLLNAI-NLYKNTPEKVMPQGLVISFAMRMLY 183

Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRA-----------KISDFGLA---KLLMPNQ 567
            +  +H   + +IIH DIK  N ++ + +              + D G +   KL     
Sbjct: 184 MIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT 240

Query: 568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC 609
                    + G+   E  ++     + D +     +  ++ 
Sbjct: 241 I--FTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLF 280

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 80.8 bits (200), Expect = 6e-17
 Identities = 48/210 (22%), Positives = 82/210 (39%), Gaps = 36/210 (17%)

Query: 477 YKHRSSKKL-LVYEFMSKGSLADLL--FNLETRPLWRDRV-RIALDVARGLLYLHDECEV 532
              R++  L +V E+   G LA ++     E + L  + V R+   +   L   H   + 
Sbjct: 74  IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133

Query: 533 --QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPE-WQNS 588
              ++H D+K  N+ +D     K+ DFGLA++L  N     A    G+  YM+PE     
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKTFVGTPYYMSPEQMNRM 191

Query: 589 GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD 648
                KSD++S G +L E+      F     +  E+                K+ E +  
Sbjct: 192 SY-NEKSDIWSLGCLLYELCALMPPFTAF--SQKEL--------------AGKIREGKFR 234

Query: 649 KI------TLERMVKTGLLCIQDEPNLRPS 672
           +I       L  ++      +  +   RPS
Sbjct: 235 RIPYRYSDELNEIIT---RMLNLKDYHRPS 261

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 81.9 bits (202), Expect = 9e-17
 Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 16/134 (11%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLR 542
           +V  FM+ GS  DL+       +  + + IA     V + L Y+H       +H  +K  
Sbjct: 103 VVTSFMAYGSAKDLICTHFMDGM--NELAIAYILQGVLKALDYIHHM---GYVHRSVKAS 157

Query: 543 NILIDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRG---YMAPE--WQNSGLITVK 594
           +ILI    +  +S       +      Q  +    + S     +++PE   QN      K
Sbjct: 158 HILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAK 217

Query: 595 SDVYSFGVVLLEII 608
           SD+YS G+   E+ 
Sbjct: 218 SDIYSVGITACELA 231

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 83.2 bits (205), Expect = 1e-16
 Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 10/136 (7%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRV--RIALDVARGLLYLHDECEVQIIH 536
             +   LL  E+   G L   L   E     ++     +  D++  L YLH+    +IIH
Sbjct: 88  APNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIH 144

Query: 537 CDIKLRNILIDDSWRA---KISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITV 593
            D+K  NI++    +    KI D G AK L   +  +     G+  Y+APE       TV
Sbjct: 145 RDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTV 202

Query: 594 KSDVYSFGVVLLEIIC 609
             D +SFG +  E I 
Sbjct: 203 TVDYWSFGTLAFECIT 218

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 79.7 bits (197), Expect = 3e-16
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 489 EFMSKGSLADLL---FNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           E MS  S        +++    +  + + +I L   + L +L +   ++IIH DIK  NI
Sbjct: 101 ELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNI 157

Query: 545 LIDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDV 597
           L+D S   K+ DFG++  L   +           G R YMAPE      +     V+SDV
Sbjct: 158 LLDRSGNIKLCDFGISGQLVDSIAKTRDA-----GCRPYMAPERIDPSASRQGYDVRSDV 212

Query: 598 YSFGVVLLEI 607
           +S G+ L E+
Sbjct: 213 WSLGITLYEL 222

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 78.3 bits (193), Expect = 7e-16
 Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 20/149 (13%)

Query: 476 VYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRV--RIALDVARGLLYLHDECEV 532
           + +  +++   L+ EF   GSL  +L          +     +  DV  G+ +L +    
Sbjct: 75  IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN--- 131

Query: 533 QIIHCDIKLRNILI----DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE---- 584
            I+H +IK  NI+     D     K++DFG A+ L  ++      + G+  Y+ P+    
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVSLYGTEEYLHPDMYER 189

Query: 585 ----WQNSGLITVKSDVYSFGVVLLEIIC 609
                 +        D++S GV       
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAAT 218

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 79.5 bits (196), Expect = 1e-15
 Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 13/144 (9%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWR-DRVRI-ALDVARGLLYLHDECE 531
           + Y   +  KL  + + M+ G   DL ++L    ++    +R  A ++  GL ++H+   
Sbjct: 257 MSYAFHTPDKLSFILDLMNGG---DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR-- 311

Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLI 591
             +++ D+K  NIL+D+    +ISD GLA      +        G+ GYMAPE    G+ 
Sbjct: 312 -FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTHGYMAPEVLQKGVA 367

Query: 592 TVKS-DVYSFGVVLLEIICCRSNF 614
              S D +S G +L +++   S F
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPF 391

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 77.0 bits (190), Expect = 2e-15
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 18/128 (14%)

Query: 489 EFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNILID 547
           E M   +  + L      P+    + ++ + + + L YL ++    +IH D+K  NIL+D
Sbjct: 104 ELMGTCA--EKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLD 159

Query: 548 DSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPE-----WQNSGLITVKSDVYS 599
           +  + K+ DFG++  L               G   YMAPE             +++DV+S
Sbjct: 160 ERGQIKLCDFGISGRLVDDKAKDRSA-----GCAAYMAPERIDPPDPTKPDYDIRADVWS 214

Query: 600 FGVVLLEI 607
            G+ L+E+
Sbjct: 215 LGISLVEL 222

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 77.1 bits (190), Expect = 3e-15
 Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 17/140 (12%)

Query: 481 SSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLYLHDECE 531
           +  ++ ++YE+M   S+                  I + V +           Y+H+E  
Sbjct: 114 NYDEVYIIYEYMENDSILKFDEY-FFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK- 171

Query: 532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE--WQNSG 589
             I H D+K  NIL+D + R K+SDFG ++  M +    + G RG+  +M PE     S 
Sbjct: 172 -NICHRDVKPSNILMDKNGRVKLSDFGESE-YMVD--KKIKGSRGTYEFMPPEFFSNESS 227

Query: 590 LITVKSDVYSFGVVLLEIIC 609
               K D++S G+ L  +  
Sbjct: 228 YNGAKVDIWSLGICLYVMFY 247

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 76.4 bits (188), Expect = 5e-15
 Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 20/149 (13%)

Query: 476 VYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRV--RIALDVARGLLYLHDECEV 532
           + +  +++   L+ EF   GSL  +L          +     +  DV  G+ +L +    
Sbjct: 75  IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN--- 131

Query: 533 QIIHCDIKLRNILI----DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE---- 584
            I+H +IK  NI+     D     K++DFG A+ L  ++      + G+  Y+ P+    
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVSLYGTEEYLHPDMYER 189

Query: 585 ----WQNSGLITVKSDVYSFGVVLLEIIC 609
                 +        D++S GV       
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAAT 218

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 74.9 bits (185), Expect = 6e-15
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 39/168 (23%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLYLHDECEVQIIHC 537
           +V E   + SL +L          + R  +    AR        G  YLH     ++IH 
Sbjct: 92  VVLELCRRRSLLELH---------KRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHR 139

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLIT 592
           D+KL N+ +++    KI DFGLA  +  +      G R     G+  Y+APE  +    +
Sbjct: 140 DLKLGNLFLNEDLEVKIGDFGLATKVEYD------GERKKVLCGTPNYIAPEVLSKKGHS 193

Query: 593 VKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFN 640
            + DV+S G ++  ++  +  FE         L  T  Y      E++
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFE------TSCLKET--YLRIKKNEYS 233

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 75.1 bits (185), Expect = 8e-15
 Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 22/135 (16%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLR 542
           LV EF   GS+ DL+ N +   L      IA    ++ RGL +LH     ++IH DIK +
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTL--KEEWIAYICREILRGLSHLHQH---KVIHRDIKGQ 158

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQ----TGIVAGVRGSRGYMAPE-----WQNSGLITV 593
           N+L+ ++   K+ DFG++  L        T I     G+  +MAPE              
Sbjct: 159 NVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-----GTPYWMAPEVIACDENPDATYDF 213

Query: 594 KSDVYSFGVVLLEII 608
           KSD++S G+  +E+ 
Sbjct: 214 KSDLWSLGITAIEMA 228

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 74.7 bits (184), Expect = 9e-15
 Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 17/136 (12%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV----RIAL---DVARGLLYLHDECEVQIIHCD 538
           LV + +S GS+ D++ ++  +   +  V     IA    +V  GL YLH       IH D
Sbjct: 90  LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRD 146

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR----GSRGYMAPE--WQNSGLIT 592
           +K  NIL+ +    +I+DFG++  L          VR    G+  +MAPE   Q  G   
Sbjct: 147 VKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-D 205

Query: 593 VKSDVYSFGVVLLEII 608
            K+D++SFG+  +E+ 
Sbjct: 206 FKADIWSFGITAIELA 221

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 76.8 bits (189), Expect = 1e-14
 Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 7/143 (4%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRI-ALDVARGLLYLHDECEV 532
           L Y + +   L LV   M+ G L   ++++        R    A ++  GL  LH E   
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE--- 305

Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           +I++ D+K  NIL+DD    +ISD GLA  +   QT  + G  G+ GYMAPE   +   T
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNERYT 363

Query: 593 VKSDVYSFGVVLLEIICCRSNFE 615
              D ++ G +L E+I  +S F+
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPFQ 386

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 74.6 bits (184), Expect = 1e-14
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 39/168 (23%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLYLHDECEVQIIHC 537
           +V E   + SL +L          + R  +    AR        G  YLH     ++IH 
Sbjct: 118 VVLELCRRRSLLELH---------KRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHR 165

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLIT 592
           D+KL N+ +++    KI DFGLA  +  +      G R     G+  Y+APE  +    +
Sbjct: 166 DLKLGNLFLNEDLEVKIGDFGLATKVEYD------GERKKVLCGTPNYIAPEVLSKKGHS 219

Query: 593 VKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFN 640
            + DV+S G ++  ++  +  FE         L  T  Y      E++
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFE------TSCLKET--YLRIKKNEYS 259

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 75.6 bits (186), Expect = 2e-14
 Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 14/148 (9%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWR-----DRVRI-ALDVARGLLYLH 527
           L Y   +   L LV   M+ G   D+ +++             R       +  GL +LH
Sbjct: 250 LAYAFETKTDLCLVMTIMNGG---DIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306

Query: 528 DECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN 587
                 II+ D+K  N+L+DD    +ISD GLA  L   QT       G+ G+MAPE   
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPELLL 362

Query: 588 SGLITVKSDVYSFGVVLLEIICCRSNFE 615
                   D ++ GV L E+I  R  F 
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFR 390

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 73.6 bits (181), Expect = 2e-14
 Identities = 19/209 (9%), Positives = 51/209 (24%), Gaps = 43/209 (20%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E++  GSL ++    +T P     +R    +A      H      +         + 
Sbjct: 108 VVAEWIRGGSLQEVA---DTSPSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVR 161

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
           +       ++                         M            + D+   G  L 
Sbjct: 162 VSIDGDVVLAYP---------------------ATMPDA-------NPQDDIRGIGASLY 193

Query: 606 EIICCRSNFEVNVSTADEVLLSTWVYNCFVA-GEFNKLVEEEVDKITLERMVKTGLLCIQ 664
            ++  R         +             +   + ++ +  ++  +    +         
Sbjct: 194 ALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQG------- 246

Query: 665 DEPNLRPSMKNVILMLEGTMEIPILAFPP 693
            +  +R +   + LM + T          
Sbjct: 247 -DGGIRSASTLLNLMQQATAVADRTEVLG 274

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 72.4 bits (176), Expect = 4e-14
 Identities = 40/254 (15%), Positives = 67/254 (26%), Gaps = 35/254 (13%)

Query: 28  STISLGSSLSPSGQHSWNSSSGLFQFGFYKQGS----GYSLGIWLVTSPNITVVWTANRD 83
           S +    +LS        S +  F+      G+         +W+             R+
Sbjct: 15  SVLPAYQTLSAG--QYLLSPNQRFKLLLQGDGNLVIQDNGATVWVANEQQPFSSTIPLRN 72

Query: 84  EQPMPSNATLALTMDGKLILKTEESKEKPIA-----DLVFDEPASFASMLDSGNFVLYSN 138
                  A LA  +     L     +   +              +   + D GN VL  +
Sbjct: 73  -----KKAPLAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVDS 127

Query: 139 RSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNML 198
            +              +    L  G  L+  V       G   L  Q DGN+V Y  N  
Sbjct: 128 LALWNGTPAIPLVPGAIDSLLLAPGSELVQGVV---YGAGASKLVFQGDGNLVAYGPNG- 183

Query: 199 NKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIY 258
                A W  GT  +             N V+          +L+ S     +       
Sbjct: 184 ----AATWNAGTQGKG--AVRAVFQGDGNLVVYGAGNA----VLWHSHTGGHA-----SA 228

Query: 259 RTTLDSDGILRLYS 272
              L ++G + +  
Sbjct: 229 VLRLQANGSIAILD 242

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 26/173 (15%), Positives = 48/173 (27%), Gaps = 12/173 (6%)

Query: 140 SGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLN 199
                      T  +   Q+L  G++LLS          RF L +Q DGN+V+       
Sbjct: 3   GRTRIPFNGVGTSVLPAYQTLSAGQYLLSP-------NQRFKLLLQGDGNLVIQDNGATV 55

Query: 200 KALEAYW-ANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIY 258
                    + T         +   +     L   S  +        + +  S ++    
Sbjct: 56  WVANEQQPFSSTIPLRNKKAPLAFYVQYGAFLDDYSRRRVW---LTDNSTFTSNDQWNRT 112

Query: 259 RTTLDSDGILRLYSHHFKNDGNSTVGIEWSALEKQCVVKGFCGLNSYCSTSTN 311
              L  DG + L       +G   + +   A++   +      L         
Sbjct: 113 HLVLQDDGNIVLVDSLALWNGTPAIPLVPGAIDSLLLAP-GSELVQGVVYGAG 164

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 72.2 bits (178), Expect = 5e-14
 Identities = 46/188 (24%), Positives = 75/188 (39%), Gaps = 37/188 (19%)

Query: 469 IAISSLLVYKHR----------SSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVR-IA 516
           + I   L  KH            S  + LV E    G +   L N   +P   +  R   
Sbjct: 62  VKIHCQL--KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN-RVKPFSENEARHFM 118

Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR- 575
             +  G+LYLH      I+H D+ L N+L+  +   KI+DFGLA  L           + 
Sbjct: 119 HQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP------HEKH 169

Query: 576 ----GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVY 631
               G+  Y++PE        ++SDV+S G +   ++  R  F+       + + +T   
Sbjct: 170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD------TDTVKNT--L 221

Query: 632 NCFVAGEF 639
           N  V  ++
Sbjct: 222 NKVVLADY 229

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 72.0 bits (177), Expect = 6e-14
 Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 20/130 (15%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLR 542
           ++ E++  GS  DLL   E  PL  D  +IA    ++ +GL YLH E   + IH DIK  
Sbjct: 97  IIMEYLGGGSALDLL---EPGPL--DETQIATILREILKGLDYLHSE---KKIHRDIKAA 148

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQ----TGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           N+L+ +    K++DFG+A  L   Q    T +     G+  +MAPE         K+D++
Sbjct: 149 NVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-----GTPFWMAPEVIKQSAYDSKADIW 203

Query: 599 SFGVVLLEII 608
           S G+  +E+ 
Sbjct: 204 SLGITAIELA 213

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 71.6 bits (176), Expect = 1e-13
 Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 14/127 (11%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+++ GSL D++       +   ++  +  +  + L +LH     Q+IH DIK  NI
Sbjct: 94  VVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNI 147

Query: 545 LIDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFG 601
           L+      K++DFG    +      ++ +V    G+  +MAPE         K D++S G
Sbjct: 148 LLGMDGSVKLTDFGFCAQITPEQSKRSTMV----GTPYWMAPEVVTRKAYGPKVDIWSLG 203

Query: 602 VVLLEII 608
           ++ +E+I
Sbjct: 204 IMAIEMI 210

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 71.6 bits (176), Expect = 1e-13
 Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 14/127 (11%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRV-RIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ EF+  G+L D++       L  +++  +   V + L YLH +    +IH DIK  +I
Sbjct: 119 VLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSI 172

Query: 545 LIDDSWRAKISDFGLAKLL---MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFG 601
           L+    R K+SDFG    +   +P +  +V    G+  +MAPE  +  L   + D++S G
Sbjct: 173 LLTLDGRVKLSDFGFCAQISKDVPKRKSLV----GTPYWMAPEVISRSLYATEVDIWSLG 228

Query: 602 VVLLEII 608
           ++++E++
Sbjct: 229 IMVIEMV 235

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 69.6 bits (169), Expect = 2e-13
 Identities = 38/245 (15%), Positives = 72/245 (29%), Gaps = 54/245 (22%)

Query: 66  IWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFA 125
           I    S   +   T +  +    S+    +  D  L+L   +S  +  A          A
Sbjct: 3   ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLF--DSDVRVWASNTAGATGCRA 60

Query: 126 SMLDSGNFVLYSNRSGIIWESFST------------------------------------ 149
            +   G  V+ + ++ I W S +                                     
Sbjct: 61  VLQSDGLLVILTAQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYGPGLWDSGTSNKGSVVV 120

Query: 150 -PTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWAN 208
                 +   +  N  H  +     +     + L+M+ D N+VL+ R+      +  W+ 
Sbjct: 121 ANNGNSILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDRD------DRVWST 174

Query: 209 GTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGIL 268
            T  +          L PNG + +L+       ++ S  S  +      Y   L  D  L
Sbjct: 175 NTAGKGTGCR---AVLQPNGRMDVLTNQN--IAVWTSGNSRSAGR----YVFVLQPDRNL 225

Query: 269 RLYSH 273
            +Y  
Sbjct: 226 AIYGG 230

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 48.8 bits (115), Expect = 2e-06
 Identities = 27/139 (19%), Positives = 44/139 (31%), Gaps = 25/139 (17%)

Query: 149 TPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWAN 208
             +      Q+L   + L             F   MQ D N+VL+  +         WA+
Sbjct: 6   GLSHEGSHPQTLHAAQSL---------ELSSFRFTMQSDCNLVLFDSD------VRVWAS 50

Query: 209 GTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGIL 268
            T   +      +  L  +G+L +L+      I + S       N    Y   L  D  +
Sbjct: 51  NTAGAT----GCRAVLQSDGLLVILTAQ--NTIRWSSGTKGSIGN----YVLVLQPDRTV 100

Query: 269 RLYSHHFKNDGNSTVGIEW 287
            +Y     + G S  G   
Sbjct: 101 TIYGPGLWDSGTSNKGSVV 119

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 45.3 bits (106), Expect = 2e-05
 Identities = 24/144 (16%), Positives = 43/144 (29%), Gaps = 34/144 (23%)

Query: 66  IWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFA 125
           I   T  N     T +  +    S   L++  D  L+L  +        +         A
Sbjct: 127 ILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVL-FDRDDRVWSTNTAGKGTGCRA 185

Query: 126 SMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQ 185
            +  +G   + +N++  +W S                           + S GR+   +Q
Sbjct: 186 VLQPNGRMDVLTNQNIAVWTS-------------------------GNSRSAGRYVFVLQ 220

Query: 186 EDGNIVLYPRNMLNKALEAYWANG 209
            D N+ +Y          A W  G
Sbjct: 221 PDRNLAIYGG--------ALWTTG 236

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 69.7 bits (171), Expect = 4e-13
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 18/130 (13%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLR 542
           +V E+   GS++D++     + L      IA       +GL YLH     + IH DIK  
Sbjct: 101 IVMEYCGAGSVSDIIRLRN-KTL--TEDEIATILQSTLKGLEYLHFM---RKIHRDIKAG 154

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQ----TGIVAGVRGSRGYMAPEWQNSGLITVKSDVY 598
           NIL++    AK++DFG+A  L        T I     G+  +MAPE          +D++
Sbjct: 155 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVI-----GTPFWMAPEVIQEIGYNCVADIW 209

Query: 599 SFGVVLLEII 608
           S G+  +E+ 
Sbjct: 210 SLGITAIEMA 219

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 70.1 bits (172), Expect = 5e-13
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 18/129 (13%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL---DVARGLLYLHDECEVQIIHCDIKLR 542
           LV E+   GS +DLL  +  +PL    V IA       +GL YLH      +IH D+K  
Sbjct: 131 LVMEYCL-GSASDLL-EVHKKPL--QEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAG 183

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYS 599
           NIL+ +    K+ DFG A ++ P  + +     G+  +MAPE     + G    K DV+S
Sbjct: 184 NILLSEPGLVKLGDFGSASIMAPANSFV-----GTPYWMAPEVILAMDEGQYDGKVDVWS 238

Query: 600 FGVVLLEII 608
            G+  +E+ 
Sbjct: 239 LGITCIELA 247

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112

 Score = 64.6 bits (157), Expect = 8e-13
 Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 25/124 (20%)

Query: 151 TDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGT 210
           +D +  G  L+ G  L         + G +   +Q D N+VLY  N       A WA+GT
Sbjct: 1   SDRLNSGHQLDTGGSL---------AEGGYLFIIQNDCNLVLYDNN------RAVWASGT 45

Query: 211 DIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRL 270
           + ++       L +  +G L + SG++         ++  +  +   Y   L  D  + +
Sbjct: 46  NGKASGCV---LKMQNDGNLVIYSGSRA-------IWASNTNRQNGNYYLILQRDRNVVI 95

Query: 271 YSHH 274
           Y + 
Sbjct: 96  YDNS 99

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112

 Score = 49.2 bits (117), Expect = 2e-07
 Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 14/120 (11%)

Query: 29  TISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMP 88
            ++ G  L   G      + G + F      +       LV   N   VW +        
Sbjct: 3   RLNSGHQLDTGGS----LAEGGYLFIIQNDCN-------LVLYDNNRAVWASGT--NGKA 49

Query: 89  SNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFS 148
           S   L +  DG L++    S+    ++        +  +    N V+Y N +  IW + +
Sbjct: 50  SGCVLKMQNDGNLVIY-SGSRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHT 108

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112

 Score = 42.2 bits (99), Expect = 5e-05
 Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 32/123 (26%)

Query: 90  NATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFST 149
                +  D  L+L  + ++    +            M + GN V+YS  S  IW S   
Sbjct: 20  GYLFIIQNDCNLVL-YDNNRAVWASGTNGKASGCVLKMQNDGNLVIYSG-SRAIWASN-- 75

Query: 150 PTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANG 209
                                  TN   G + L +Q D N+V+Y     + +  A WA  
Sbjct: 76  -----------------------TNRQNGNYYLILQRDRNVVIY-----DNSNNAIWATH 107

Query: 210 TDI 212
           T++
Sbjct: 108 TNV 110

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 69.3 bits (170), Expect = 9e-13
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 26/143 (18%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V+E + + +L  L+   E R +    V+ I+  +  GL Y+H  C   IIH DIK  N+
Sbjct: 107 MVFEVLGE-NLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENV 163

Query: 545 LIDDSWRA------KISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE------WQNSGLIT 592
           L++           KI+D G A     + T  +     +R Y +PE      W       
Sbjct: 164 LMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ----TREYRSPEVLLGAPW------G 213

Query: 593 VKSDVYSFGVVLLEIICCRSNFE 615
             +D++S   ++ E+I     FE
Sbjct: 214 CGADIWSTACLIFELITGDFLFE 236

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 68.1 bits (167), Expect = 1e-12
 Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 36/163 (22%)

Query: 469 IAISSLL----------VYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL 517
           IAI   L          V    +   L +V+E +++G +      + T         ++ 
Sbjct: 87  IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV----MEVPTLK------PLSE 136

Query: 518 DVAR--------GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG 569
           D AR        G+ YLH +   +IIH DIK  N+L+ +    KI+DFG++     +   
Sbjct: 137 DQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD-A 192

Query: 570 IVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFGVVLLEIIC 609
           +++   G+  +MAPE              DV++ GV L   + 
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVF 235

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 68.9 bits (169), Expect = 1e-12
 Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 25/146 (17%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLYLHDECEVQIIHC 537
           +V + +  G   DL ++L      +  V    +  +         L YL ++   +IIH 
Sbjct: 92  MVVDLLLGG---DLRYHL------QQNVHFKEETVKLFICELVMALDYLQNQ---RIIHR 139

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE--WQNSGLITVKS 595
           D+K  NIL+D+     I+DF +A +L       +  + G++ YMAPE      G     +
Sbjct: 140 DMKPDNILLDEHGHVHITDFNIAAMLPRETQ--ITTMAGTKPYMAPEMFSSRKGAGYSFA 197

Query: 596 -DVYSFGVVLLEIICCRSNFEVNVST 620
            D +S GV   E++  R  + +  ST
Sbjct: 198 VDWWSLGVTAYELLRGRRPYHIRSST 223

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 67.2 bits (165), Expect = 2e-12
 Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 8/130 (6%)

Query: 481 SSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
            + ++ L+ E+   G++   L  L      R       ++A  L Y H +   ++IH DI
Sbjct: 80  DATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSK---RVIHRDI 135

Query: 540 KLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
           K  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +   K D++S
Sbjct: 136 KPENLLLGSAGELKIADFGWSVHAPSSRRTDLC---GTLDYLPPEMIEGRMHDEKVDLWS 192

Query: 600 FGVVLLEIIC 609
            GV+  E + 
Sbjct: 193 LGVLCYEFLV 202

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 66.9 bits (164), Expect = 3e-12
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 18/135 (13%)

Query: 481 SSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
             K++ L+ EF  +G L   L         R       ++A  L Y H+    ++IH DI
Sbjct: 85  DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA-TFMEELADALHYCHER---KVIHRDI 140

Query: 540 KLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLITVK 594
           K  N+L+      KI+DFG +             +R     G+  Y+ PE         K
Sbjct: 141 KPENLLMGYKGELKIADFGWSVH--------APSLRRRTMCGTLDYLPPEMIEGKTHDEK 192

Query: 595 SDVYSFGVVLLEIIC 609
            D++  GV+  E + 
Sbjct: 193 VDLWCAGVLCYEFLV 207

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 68.2 bits (167), Expect = 3e-12
 Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 23/157 (14%)

Query: 467 FLIAISSLLVYKHRSSKKL-LVYEFMSKGSLADLLFNLET-RPLWRDRVRI-ALDVARGL 523
           FL A    L Y  ++  +L  V E+ + G   +L F+L   R    DR R    ++   L
Sbjct: 209 FLTA----LKYSFQTHDRLCFVMEYANGG---ELFFHLSRERVFSEDRARFYGAEIVSAL 261

Query: 524 LYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSR 578
            YLH E    +++ D+KL N+++D     KI+DFGL K       GI  G       G+ 
Sbjct: 262 DYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKE------GIKDGATMKTFCGTP 313

Query: 579 GYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFE 615
            Y+APE           D +  GVV+ E++C R  F 
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 350

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 66.6 bits (163), Expect = 4e-12
 Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 19/133 (14%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ EF   G++  ++  L+ R L   +++ +   +   L +LH +   +IIH D+K  N+
Sbjct: 93  IMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNV 148

Query: 545 LIDDSWRAKISDFG----LAKLLMPNQTGIVAGVRGSRGYMAPE-----WQNSGLITVKS 595
           L+      +++DFG      K L    + I     G+  +MAPE              K+
Sbjct: 149 LMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETMKDTPYDYKA 203

Query: 596 DVYSFGVVLLEII 608
           D++S G+ L+E+ 
Sbjct: 204 DIWSLGITLIEMA 216

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 66.5 bits (163), Expect = 4e-12
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 15/103 (14%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ-- 567
           ++  +I   +   +  LH      I+H D+K  NIL+DD    K++DFG +  L P +  
Sbjct: 124 KETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL 180

Query: 568 TGIVAGVRGSRGYMAPE------WQNSGLITVKSDVYSFGVVL 604
             +     G+  Y+APE        N      + D++S GV++
Sbjct: 181 REVC----GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 66.9 bits (164), Expect = 5e-12
 Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 34/162 (20%)

Query: 467 FLIAISSLLVYKHRSSKKL-LVYEFMSKGSLADLLFNLET-RPLWRDRVRI-ALDVARGL 523
           FL A    L Y  ++  +L  V E+ + G   +L F+L   R    +R R    ++   L
Sbjct: 66  FLTA----LKYAFQTHDRLCFVMEYANGG---ELFFHLSRERVFTEERARFYGAEIVSAL 118

Query: 524 LYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSR 578
            YLH      +++ DIKL N+++D     KI+DFGL K       GI  G       G+ 
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE------GISDGATMKTFCGTP 169

Query: 579 GYMAPEWQNSGLITVKS-----DVYSFGVVLLEIICCRSNFE 615
            Y+APE     ++         D +  GVV+ E++C R  F 
Sbjct: 170 EYLAPE-----VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115

 Score = 62.2 bits (151), Expect = 5e-12
 Identities = 25/122 (20%), Positives = 40/122 (32%), Gaps = 24/122 (19%)

Query: 152 DTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTD 211
           + +L GQ+L     L +         G + L +Q   N+V Y            WA+ TD
Sbjct: 3   NVLLSGQTLHADHSLQA---------GAYTLTIQNKCNLVKYQNG------RQIWASNTD 47

Query: 212 IQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLY 271
            +       +L L  +G L +   N          +      +   Y   L  DG   +Y
Sbjct: 48  RRGS---GCRLTLLSDGNLVIYDHN------NNDVWGSACWGDNGKYALVLQKDGRFVIY 98

Query: 272 SH 273
             
Sbjct: 99  GP 100

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115

 Score = 47.2 bits (112), Expect = 9e-07
 Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 26  LKSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQ 85
           + + +  G +L           +G +      Q         LV   N   +W +N D +
Sbjct: 1   MDNVLLSGQTLHADHS----LQAGAYTLTI--QNKCN-----LVKYQNGRQIWASNTDRR 49

Query: 86  PMPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWE 145
              S   L L  DG L++    + +   +    D       +   G FV+Y     ++W 
Sbjct: 50  G--SGCRLTLLSDGNLVIYDHNNNDVWGSACWGDNGKYALVLQKDGRFVIYGP---VLWS 104

Query: 146 S 146
            
Sbjct: 105 L 105

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115

 Score = 42.6 bits (100), Expect = 4e-05
 Identities = 19/122 (15%), Positives = 39/122 (31%), Gaps = 34/122 (27%)

Query: 90  NATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFST 149
             TL +     L+   +  ++   ++          ++L  GN V+Y + +  +W S   
Sbjct: 21  AYTLTIQNKCNLVK-YQNGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWGS--- 76

Query: 150 PTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANG 209
                                       G++ L +Q+DG  V+Y            W+ G
Sbjct: 77  ----------------------ACWGDNGKYALVLQKDGRFVIYGP--------VLWSLG 106

Query: 210 TD 211
            +
Sbjct: 107 PN 108

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 66.6 bits (163), Expect = 8e-12
 Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 13/131 (9%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV   M     ADL   ++ + L  D V+ +   + RGL Y+H      IIH D+K  N+
Sbjct: 111 LVTHLMG----ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 163

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVV 603
            +++    KI DFGLA+      TG VA    +R Y APE   N        D++S G +
Sbjct: 164 AVNEDCELKILDFGLARHTADEMTGYVA----TRWYRAPEIMLNWMHYNQTVDIWSVGCI 219

Query: 604 LLEIICCRSNF 614
           + E++  R+ F
Sbjct: 220 MAELLTGRTLF 230

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 66.7 bits (163), Expect = 8e-12
 Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 25/149 (16%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLY 525
           L Y  +    L LV ++   G   DLL  L      +   R+  ++AR         +  
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGG---DLLTLLS-----KFEDRLPEEMARFYLAEMVIAIDS 190

Query: 526 LHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE- 584
           +H   ++  +H DIK  NIL+D +   +++DFG    LM + T   +   G+  Y++PE 
Sbjct: 191 VH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEI 247

Query: 585 ----WQNSGLITVKSDVYSFGVVLLEIIC 609
                   G    + D +S GV + E++ 
Sbjct: 248 LQAMEGGKGRYGPECDWWSLGVCMYEMLY 276

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111

 Score = 61.0 bits (148), Expect = 1e-11
 Identities = 24/121 (19%), Positives = 36/121 (29%), Gaps = 22/121 (18%)

Query: 153 TILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTDI 212
            +L G  +     L         S       MQ D N+VLY            + + T  
Sbjct: 4   VLLTGDVIHTDNQL---------SYESAAFVMQGDCNLVLYNEA-------GGFQSNTHG 47

Query: 213 QSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLYS 272
           +        L L+  G L++ S N    +     Y          Y  TL  D  + +Y 
Sbjct: 48  RGVDCT---LRLNNRGQLEIHSANSNTPV---WVYPRSVNTVRGNYAATLGPDQHVTIYG 101

Query: 273 H 273
            
Sbjct: 102 P 102

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 10/88 (11%), Positives = 23/88 (26%), Gaps = 32/88 (36%)

Query: 124 FASMLDSGNFVLYSNRSG-IIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCL 182
              + + G   ++S  S   +W                             N+  G +  
Sbjct: 53  TLRLNNRGQLEIHSANSNTPVW-----------------------VYPRSVNTVRGNYAA 89

Query: 183 NMQEDGNIVLYPRNMLNKALEAYWANGT 210
            +  D ++ +Y       A+   W+   
Sbjct: 90  TLGPDQHVTIY-----GPAI---WSTPA 109

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 65.4 bits (160), Expect = 2e-11
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 19/97 (19%)

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGI--VAGVRGS 577
           R +  LH    V + H DIK  N+L++      K+ DFG AK L P++  +  +     S
Sbjct: 140 RSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC----S 194

Query: 578 RGYMAPEWQNSGLI------TVKSDVYSFGVVLLEII 608
           R Y APE     LI      T   D++S G +  E++
Sbjct: 195 RYYRAPE-----LIFGNQHYTTAVDIWSVGCIFAEMM 226

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 66.4 bits (162), Expect = 2e-11
 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 7/121 (5%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           ++YEFMS G L + + +   +    + V     V +GL ++H+      +H D+K  NI+
Sbjct: 231 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIM 287

Query: 546 I--DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
                S   K+ DFGL   L P Q+  V    G+  + APE      +   +D++S GV+
Sbjct: 288 FTTKRSNELKLIDFGLTAHLDPKQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345

Query: 604 L 604
            
Sbjct: 346 S 346

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 65.4 bits (160), Expect = 2e-11
 Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 19/134 (14%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV  FM      DL   ++   L  DR++ +   + +GL Y+H      IIH D+K  N+
Sbjct: 107 LVMPFMG----TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNL 159

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE----WQNSGLITVKSDVYSF 600
            +++    KI DFGLA+      TG V     +R Y APE    W      T   D++S 
Sbjct: 160 AVNEDCELKILDFGLARQADSEMTGYVV----TRWYRAPEVILNWMR---YTQTVDIWSV 212

Query: 601 GVVLLEIICCRSNF 614
           G ++ E+I  ++ F
Sbjct: 213 GCIMAEMITGKTLF 226

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 64.6 bits (158), Expect = 2e-11
 Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 32/150 (21%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLY 525
           L +  +  +KL     +   G   +LL  +      R          R         L Y
Sbjct: 95  LYFTFQDDEKLYFGLSYAKNG---ELLKYI------RKIGSFDETCTRFYTAEIVSALEY 145

Query: 526 LHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPE 584
           LH +    IIH D+K  NIL+++    +I+DFG AK+L P      A    G+  Y++PE
Sbjct: 146 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 202

Query: 585 WQNSGLITVK-----SDVYSFGVVLLEIIC 609
                L+T K     SD+++ G ++ +++ 
Sbjct: 203 -----LLTEKSACKSSDLWALGCIIYQLVA 227

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 65.4 bits (160), Expect = 2e-11
 Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 29/150 (19%)

Query: 486 LVYEFMSKGSLADLLFNLET-RPLWRDRVRI-ALDVARGLLYLHDECEVQIIHCDIKLRN 543
            V E+++ G   DL+F+++  R L  +  R  + +++  L YLH+     II+ D+KL N
Sbjct: 130 FVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDN 183

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLITVKS--- 595
           +L+D     K++D+G+ K       G+  G       G+  Y+APE     ++  +    
Sbjct: 184 VLLDSEGHIKLTDYGMCKE------GLRPGDTTSTFCGTPNYIAPE-----ILRGEDYGF 232

Query: 596 --DVYSFGVVLLEIICCRSNFEVNVSTADE 623
             D ++ GV++ E++  RS F++  S+ + 
Sbjct: 233 SVDWWALGVLMFEMMAGRSPFDIVGSSDNP 262

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 64.9 bits (159), Expect = 2e-11
 Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 29/150 (19%)

Query: 486 LVYEFMSKGSLADLLFNLET-RPLWRDRVRI-ALDVARGLLYLHDECEVQIIHCDIKLRN 543
            V E+++ G   DL+F+++  R L  +  R  + +++  L YLH+     II+ D+KL N
Sbjct: 87  FVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDN 140

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLITVKS--- 595
           +L+D     K++D+G+ K       G+  G       G+  Y+APE     ++  +    
Sbjct: 141 VLLDSEGHIKLTDYGMCKE------GLRPGDTTSTFCGTPNYIAPE-----ILRGEDYGF 189

Query: 596 --DVYSFGVVLLEIICCRSNFEVNVSTADE 623
             D ++ GV++ E++  RS F++  S+ + 
Sbjct: 190 SVDWWALGVLMFEMMAGRSPFDIVGSSDNP 219

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 64.9 bits (159), Expect = 2e-11
 Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 29/142 (20%)

Query: 486 LVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLLYLHDECEVQIIHCDIKLRN 543
            V EF++ G   DL+F+++ +R     R R  A ++   L++LHD+    II+ D+KL N
Sbjct: 101 FVMEFVNGG---DLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDN 154

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLITVKS--- 595
           +L+D     K++DFG+ K       GI  GV      G+  Y+APE     ++       
Sbjct: 155 VLLDHEGHCKLADFGMCKE------GICNGVTTATFCGTPDYIAPE-----ILQEMLYGP 203

Query: 596 --DVYSFGVVLLEIICCRSNFE 615
             D ++ GV+L E++C  + FE
Sbjct: 204 AVDWWAMGVLLYEMLCGHAPFE 225

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113

 Score = 59.9 bits (145), Expect = 3e-11
 Identities = 20/124 (16%), Positives = 45/124 (36%), Gaps = 22/124 (17%)

Query: 150 PTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANG 209
             + +   Q + +   L         +T  + L M++D N+VL   +  N      W +G
Sbjct: 5   VRNVLFSSQVMYDNAQL---------ATRDYSLVMRDDCNLVLTKGSKTN----IVWESG 51

Query: 210 TDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILR 269
           T  + ++ +   + L  +G L +            + +   ++ +   Y   L  +G   
Sbjct: 52  TSGRGQHCF---MRLGHSGELDITDDR------LNTVFVSNTVGQEGDYVLILQINGQAV 102

Query: 270 LYSH 273
           +Y  
Sbjct: 103 VYGP 106

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113

 Score = 50.6 bits (121), Expect = 5e-08
 Identities = 21/123 (17%), Positives = 39/123 (31%), Gaps = 36/123 (29%)

Query: 90  NATLALTMDGKLILKTEESKEKPIADLVFDEPAS--FASMLDSGNFVLYSNRSGIIWESF 147
           + +L +  D  L+L T+ SK   + +          F  +  SG   +  +R   ++ S 
Sbjct: 25  DYSLVMRDDCNLVL-TKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNTVFVS- 82

Query: 148 STPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWA 207
                                    T    G + L +Q +G  V+Y       A+   W+
Sbjct: 83  ------------------------NTVGQEGDYVLILQINGQAVVY-----GPAV---WS 110

Query: 208 NGT 210
              
Sbjct: 111 TAA 113

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110

 Score = 59.9 bits (145), Expect = 3e-11
 Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 25/128 (19%)

Query: 146 SFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAY 205
           +     + +  GQ L     L +             L MQ D N+VLY            
Sbjct: 1   NIPFTNNLLFSGQVLYGDGRLTA---------KNHQLVMQGDCNLVLYGGK-------YG 44

Query: 206 WANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSD 265
           W + T    E+ +   L L+  G L +   +      F++ +S +S ++   Y   L  D
Sbjct: 45  WQSNTHGNGEHCF---LRLNHKGELIIKDDD------FKTIWSSRSSSKQGEYVLILQDD 95

Query: 266 GILRLYSH 273
           G   +Y  
Sbjct: 96  GFGVIYGP 103

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110

 Score = 51.0 bits (122), Expect = 3e-08
 Identities = 21/132 (15%), Positives = 39/132 (29%), Gaps = 39/132 (29%)

Query: 81  NRDEQPMPSNATLALTMDGKLILKTEESKEKPI--ADLVFDEPASFASMLDSGNFVLYSN 138
             D +    N  L +  D  L+L       K    ++   +    F  +   G  ++  +
Sbjct: 16  YGDGRLTAKNHQLVMQGDCNLVL----YGGKYGWQSNTHGNGEHCFLRLNHKGELIIKDD 71

Query: 139 RSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNML 198
               IW S                          ++S  G + L +Q+DG  V+Y     
Sbjct: 72  DFKTIWSS-------------------------RSSSKQGEYVLILQDDGFGVIYGP--- 103

Query: 199 NKALEAYWANGT 210
                A +   +
Sbjct: 104 -----AIFETSS 110

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 64.2 bits (157), Expect = 3e-11
 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 9/99 (9%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI----DDSWRAKISDFGLAKLLMP 565
            +       +  G+ YLH +   +I H D+K  NI++          K+ DFGLA  +  
Sbjct: 115 EEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171

Query: 566 NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
                   + G+  ++APE  N   + +++D++S GV+ 
Sbjct: 172 GV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 64.6 bits (158), Expect = 3e-11
 Identities = 42/142 (29%), Positives = 74/142 (52%), Gaps = 15/142 (10%)

Query: 481 SSKKL-LVYEFMSKGSLADLLFNLET-RPLWRDRVRI-ALDVARGLLYLHDECEVQIIHC 537
           +  KL L+ ++++ G   +L  +L          V+I   ++   L +LH   ++ II+ 
Sbjct: 130 TETKLHLILDYINGG---ELFTHLSQRERFTEHEVQIYVGEIVLALEHLH---KLGIIYR 183

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE---WQNSGLITVK 594
           DIKL NIL+D +    ++DFGL+K  + ++T       G+  YMAP+     +SG    K
Sbjct: 184 DIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSG--HDK 241

Query: 595 S-DVYSFGVVLLEIICCRSNFE 615
           + D +S GV++ E++   S F 
Sbjct: 242 AVDWWSLGVLMYELLTGASPFT 263

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 64.5 bits (157), Expect = 3e-11
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 10/107 (9%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI--DDSWRAKISDFGLAKLLMPNQ 567
           +    I   +   L YLH++    I H DIK  N L   + S+  K+ DFGL+K      
Sbjct: 168 KLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLN 224

Query: 568 TGIVAGVR---GSRGYMAPE--WQNSGLITVKSDVYSFGVVLLEIIC 609
            G   G+    G+  ++APE     +     K D +S GV+L  ++ 
Sbjct: 225 NGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM 271

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 65.4 bits (159), Expect = 3e-11
 Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 29/142 (20%)

Query: 486 LVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLLYLHDECEVQIIHCDIKLRN 543
            V E+++ G   DL+++++             A ++A GL +L  +    II+ D+KL N
Sbjct: 419 FVMEYVNGG---DLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDN 472

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLITVKS--- 595
           +++D     KI+DFG+ K        I  GV      G+  Y+APE     +I  +    
Sbjct: 473 VMLDSEGHIKIADFGMCKE------NIWDGVTTKTFCGTPDYIAPE-----IIAYQPYGK 521

Query: 596 --DVYSFGVVLLEIICCRSNFE 615
             D ++FGV+L E++  ++ FE
Sbjct: 522 SVDWWAFGVLLYEMLAGQAPFE 543

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 59.5 bits (144), Expect = 3e-11
 Identities = 25/122 (20%), Positives = 42/122 (34%), Gaps = 23/122 (18%)

Query: 152 DTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTD 211
           + +  G+ L  G+ L             +   MQED N+VLY  +       + WA+ T 
Sbjct: 2   NLLTNGEGLYAGQSLDV---------EPYHFIMQEDCNLVLYDHS------TSVWASNTG 46

Query: 212 IQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLY 271
           I  +     K  L  +G   +              ++  S+     Y   L  DG + +Y
Sbjct: 47  ILGKKGC--KAVLQSDGNFVVYDAEGRSL------WASHSVRGNGNYVLVLQEDGNVVIY 98

Query: 272 SH 273
             
Sbjct: 99  GS 100

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 50.6 bits (121), Expect = 5e-08
 Identities = 23/122 (18%), Positives = 37/122 (30%), Gaps = 33/122 (27%)

Query: 89  SNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFS 148
                 +  D  L+L    +        +  +    A +   GNFV+Y      +W S  
Sbjct: 19  EPYHFIMQEDCNLVLYDHSTSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWAS-- 76

Query: 149 TPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWAN 208
                                   +    G + L +QEDGN+V+Y            W+ 
Sbjct: 77  -----------------------HSVRGNGNYVLVLQEDGNVVIYGS--------DIWST 105

Query: 209 GT 210
           GT
Sbjct: 106 GT 107

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 65.1 bits (159), Expect = 4e-11
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 9/103 (8%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPN 566
            D  RI   V  G+ Y+H     +I+H D+K  N+L+         +I DFGL+     +
Sbjct: 126 VDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182

Query: 567 QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC 609
           +   +    G+  Y+APE  + G    K DV+S GV+L  ++ 
Sbjct: 183 KK--MKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLS 222

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 64.7 bits (158), Expect = 4e-11
 Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 13/144 (9%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRI-ALDVARGLLYLHDECEV 532
           L +  +    L LV E+   G L  LL     R +  +  R    ++   +  +H    +
Sbjct: 126 LHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSVH---RL 181

Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-------W 585
             +H DIK  NIL+D     +++DFG    L  + T       G+  Y++PE        
Sbjct: 182 GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGG 241

Query: 586 QNSGLITVKSDVYSFGVVLLEIIC 609
             +G    + D ++ GV   E+  
Sbjct: 242 PGTGSYGPECDWWALGVFAYEMFY 265

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 64.4 bits (157), Expect = 4e-11
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 21/97 (21%)

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQ--TGIVAGVRGS 577
           R + ++H    + I H DIK +N+L++      K+ DFG AK L+P++     +     S
Sbjct: 152 RAVGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYIC----S 204

Query: 578 RGYMAPEWQNSGLI------TVKSDVYSFGVVLLEII 608
           R Y APE     L+      T   D++S G V  E+I
Sbjct: 205 RFYRAPE-----LMLGATEYTPSIDLWSIGCVFGELI 236

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 65.1 bits (159), Expect = 4e-11
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPN 566
            D   I   +  G+ YLH      I+H DIK  NIL+   +     KI DFGL+     +
Sbjct: 146 CDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD 202

Query: 567 Q--TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC 609
                 +    G+  Y+APE         K DV+S GV++  ++C
Sbjct: 203 YKLRDRL----GTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLC 242

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 63.7 bits (156), Expect = 4e-11
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 11/99 (11%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI----DDSWRAKISDFGLAKLLMP 565
           +D   +   V   + YLH+     I+H D+K  N+L     ++S +  I+DFGL+K+   
Sbjct: 106 KDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENS-KIMITDFGLSKMEQN 161

Query: 566 NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
                     G+ GY+APE       +   D +S GV+ 
Sbjct: 162 GIMSTAC---GTPGYVAPEVLAQKPYSKAVDCWSIGVIT 197

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 64.2 bits (157), Expect = 4e-11
 Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 29/142 (20%)

Query: 486 LVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLLYLHDECEVQIIHCDIKLRN 543
            V E+++ G   DL+++++             A ++A GL +L  +    II+ D+KL N
Sbjct: 98  FVMEYVNGG---DLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDN 151

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLITVKS--- 595
           +++D     KI+DFG+ K        I  GV      G+  Y+APE     +I  +    
Sbjct: 152 VMLDSEGHIKIADFGMCKE------NIWDGVTTKTFCGTPDYIAPE-----IIAYQPYGK 200

Query: 596 --DVYSFGVVLLEIICCRSNFE 615
             D ++FGV+L E++  ++ FE
Sbjct: 201 SVDWWAFGVLLYEMLAGQAPFE 222

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 64.3 bits (157), Expect = 4e-11
 Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 31/141 (21%)

Query: 486 LVYEFMSKGSLADL-----LFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDI 539
           LV +++ +     +      ++   + L    V++ +  + R L Y+H      I H DI
Sbjct: 130 LVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDI 182

Query: 540 KLRNILID-DSWRAKISDFGLAKLLMPNQ--TGIVAGVRGSRGYMAPEWQNSGLI----- 591
           K +N+L+D D+   K+ DFG AK L+  +     +     SR Y APE     LI     
Sbjct: 183 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC----SRYYRAPE-----LIFGATD 233

Query: 592 -TVKSDVYSFGVVLLEIICCR 611
            T   DV+S G VL E++  +
Sbjct: 234 YTSSIDVWSAGCVLAELLLGQ 254

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109

 Score = 59.1 bits (143), Expect = 5e-11
 Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 27/123 (21%)

Query: 151 TDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGT 210
           T+ +L GQ+L+   HL           G F L MQ+D N+VLY            W + T
Sbjct: 3   TNYLLSGQTLDTEGHL---------KNGDFDLVMQDDCNLVLY---------NGNWQSNT 44

Query: 211 DIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRL 270
                     KL L+  G L + +G+     +++S     + +    Y   +  DG L +
Sbjct: 45  ANNG---RDCKLTLTDYGELVIKNGDG--STVWKS----GAQSVKGNYAAVVHPDGRLVV 95

Query: 271 YSH 273
           +  
Sbjct: 96  FGP 98

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109

 Score = 43.3 bits (102), Expect = 2e-05
 Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 33/90 (36%)

Query: 124 FASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLN 183
             ++ D G  V+ +     +W+S                            S  G +   
Sbjct: 52  KLTLTDYGELVIKNGDGSTVWKS-------------------------GAQSVKGNYAAV 86

Query: 184 MQEDGNIVLYPRNMLNKALEAYWANGTDIQ 213
           +  DG +V++          + +     ++
Sbjct: 87  VHPDGRLVVFG--------PSVFKIDPWVR 108

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 64.0 bits (156), Expect = 5e-11
 Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 7/121 (5%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ EF+S G L D +   + +    + +        GL ++H+     I+H DIK  NI+
Sbjct: 125 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIM 181

Query: 546 I--DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
                +   KI DFGLA  L P++  IV     +  + APE  +   +   +D+++ GV+
Sbjct: 182 CETKKASSVKIIDFGLATKLNPDE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVL 239

Query: 604 L 604
            
Sbjct: 240 G 240

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 64.0 bits (156), Expect = 5e-11
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 15/103 (14%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ-- 567
           ++   I   +   + +LH      I+H D+K  NIL+DD+ + ++SDFG +  L P +  
Sbjct: 200 KETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL 256

Query: 568 TGIVAGVRGSRGYMAPE------WQNSGLITVKSDVYSFGVVL 604
             +     G+ GY+APE       +       + D+++ GV+L
Sbjct: 257 RELC----GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 63.9 bits (156), Expect = 5e-11
 Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 31/141 (21%)

Query: 486 LVYEFMSKGSLADL-----LFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDI 539
           LV E++ +     +      +    + +    +++ +  + R L Y+H    + I H DI
Sbjct: 115 LVLEYVPE----TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDI 167

Query: 540 KLRNILID-DSWRAKISDFGLAKLLMPNQTGI--VAGVRGSRGYMAPEWQNSGLI----- 591
           K +N+L+D  S   K+ DFG AK+L+  +  +  +     SR Y APE     LI     
Sbjct: 168 KPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYIC----SRYYRAPE-----LIFGATN 218

Query: 592 -TVKSDVYSFGVVLLEIICCR 611
            T   D++S G V+ E++  +
Sbjct: 219 YTTNIDIWSTGCVMAELMQGQ 239

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 63.9 bits (156), Expect = 6e-11
 Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 15/132 (11%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E M     A+L   +    L  +R+   L  +  G+ +LH      IIH D+K  NI
Sbjct: 107 IVMELMD----ANL-CQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNI 158

Query: 545 LIDDSWRAKISDFGLAKLLMPNQ--TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           ++      KI DFGLA+    +   T  V     +R Y APE           D++S G 
Sbjct: 159 VVKSDCTLKILDFGLARTAGTSFMMTPYVV----TRYYRAPEVILGMGYKENVDIWSVGC 214

Query: 603 VLLEIICCRSNF 614
           ++ E+I     F
Sbjct: 215 IMGEMIKGGVLF 226

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 64.3 bits (157), Expect = 7e-11
 Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPN 566
            D   I   V  G+ YLH      I+H D+K  N+L+   +     KI DFGL+ +    
Sbjct: 136 VDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192

Query: 567 QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC 609
           +   +    G+  Y+APE         K DV+S GV+L  ++ 
Sbjct: 193 KK--MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLA 232

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 62.6 bits (153), Expect = 7e-11
 Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 9/99 (9%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI----DDSWRAKISDFGLAKLLMP 565
            +  +    +  G+ YLH +   +I H D+K  NI++      + R K+ DFG+A  +  
Sbjct: 108 DEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 164

Query: 566 NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
                   + G+  ++APE  N   + +++D++S GV+ 
Sbjct: 165 GN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 201

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 63.0 bits (154), Expect = 7e-11
 Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 7/121 (5%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +++EF+S   + + +         R+ V     V   L +LH      I H DI+  NI+
Sbjct: 78  MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENII 134

Query: 546 I--DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
                S   KI +FG A+ L P        +  +  Y APE     +++  +D++S G +
Sbjct: 135 YQTRRSSTIKIIEFGQARQLKPGDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTL 192

Query: 604 L 604
           +
Sbjct: 193 V 193

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 63.6 bits (155), Expect = 8e-11
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 12/141 (8%)

Query: 475 LVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRI-ALDVARGLLYLHDECEV 532
           L Y  +  + L +V E+M  G   DL+  +    +     R    +V   L  +H    +
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGG---DLVNLMSNYDVPEKWARFYTAEVVLALDAIH---SM 187

Query: 533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLI 591
             IH D+K  N+L+D S   K++DFG    +            G+  Y++PE  ++ G  
Sbjct: 188 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 247

Query: 592 TV--KS-DVYSFGVVLLEIIC 609
               +  D +S GV L E++ 
Sbjct: 248 GYYGRECDWWSVGVFLYEMLV 268

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 63.1 bits (154), Expect = 8e-11
 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 9/99 (9%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI----DDSWRAKISDFGLAKLLMP 565
            +       +  G+ YLH +   +I H D+K  NI++          K+ DFGLA  +  
Sbjct: 115 EEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171

Query: 566 NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
                   + G+  ++APE  N   + +++D++S GV+ 
Sbjct: 172 GVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 63.1 bits (154), Expect = 8e-11
 Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV  FM      DL   +       ++++ +   + +GL Y+H      ++H D+K  N+
Sbjct: 106 LVMPFMQ----TDL-QKIMGLKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNL 157

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVV 603
            +++    KI DFGLA+      TG V     +R Y APE   +        D++S G +
Sbjct: 158 AVNEDCELKILDFGLARHADAEMTGYVV----TRWYRAPEVILSWMHYNQTVDIWSVGCI 213

Query: 604 LLEIICCRSNF 614
           + E++  ++ F
Sbjct: 214 MAEMLTGKTLF 224

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 62.7 bits (153), Expect = 9e-11
 Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 23/139 (16%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLYLHDECEVQIIHC 537
           L+ E+ S G + D L             R+    AR         + Y H +    I+H 
Sbjct: 91  LIMEYASGGEVFDYLVA---------HGRMKEKEARSKFRQIVSAVQYCHQKR---IVHR 138

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLITVKSD 596
           D+K  N+L+D     KI+DFG +          +    G+  Y APE +Q       + D
Sbjct: 139 DLKAENLLLDADMNIKIADFGFSNEFTVGG--KLDAFCGAPPYAAPELFQGKKYDGPEVD 196

Query: 597 VYSFGVVLLEIICCRSNFE 615
           V+S GV+L  ++     F+
Sbjct: 197 VWSLGVILYTLVSGSLPFD 215

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 63.0 bits (154), Expect = 9e-11
 Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 29/142 (20%)

Query: 486 LVYEFMSKGSLADLLFNLET-RPLWRDRVRI-ALDVARGLLYLHDECEVQIIHCDIKLRN 543
            V E+++ G   DL++++++       R    A ++  GL +LH +    I++ D+KL N
Sbjct: 95  FVMEYLNGG---DLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDN 148

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLITVKS--- 595
           IL+D     KI+DFG+ K        ++   +     G+  Y+APE     ++  +    
Sbjct: 149 ILLDKDGHIKIADFGMCKE------NMLGDAKTNTFCGTPDYIAPE-----ILLGQKYNH 197

Query: 596 --DVYSFGVVLLEIICCRSNFE 615
             D +SFGV+L E++  +S F 
Sbjct: 198 SVDWWSFGVLLYEMLIGQSPFH 219

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 62.7 bits (153), Expect = 1e-10
 Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 9/123 (7%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLW-RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L+ E+ + G +  L        +   D +R+   +  G+ YLH      I+H D+K +NI
Sbjct: 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNI 162

Query: 545 LI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFG 601
           L+         KI DFG+++ +       +  + G+  Y+APE  N   IT  +D+++ G
Sbjct: 163 LLSSIYPLGDIKIVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIG 220

Query: 602 VVL 604
           ++ 
Sbjct: 221 IIA 223

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 62.7 bits (153), Expect = 1e-10
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 10/99 (10%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI----DDSWRAKISDFGLAKLLMP 565
           RD       +   + YLH+     I+H D+K  N+L      D+   KI+DFGL+K++  
Sbjct: 148 RDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDA-PLKIADFGLSKIVEH 203

Query: 566 NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
               ++  V G+ GY APE         + D++S G++ 
Sbjct: 204 QV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT 240

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 62.4 bits (152), Expect = 1e-10
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 519 VARGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGS 577
           V   + + H+     ++H DIK  NILID +    K+ DFG   LL   +  +     G+
Sbjct: 158 VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGT 211

Query: 578 RGYMAPEW-QNSGLITVKSDVYSFGVVLLEIIC 609
           R Y  PEW +        + V+S G++L +++C
Sbjct: 212 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 244

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 62.3 bits (152), Expect = 2e-10
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 9/99 (9%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI----DDSWRAKISDFGLAKLLMP 565
            +       +  G+ YLH     QI H D+K  NI++        R KI DFGLA  +  
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170

Query: 566 NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
                   + G+  ++APE  N   + +++D++S GV+ 
Sbjct: 171 GNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119

 Score = 58.0 bits (140), Expect = 2e-10
 Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 32/141 (22%)

Query: 132 NFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIV 191
           N +++S       +        +   +SLE               T  +   MQ D N+V
Sbjct: 1   NNIIFSK------QPDDNHPQILHATESLE-----------ILFGTHVYRFIMQTDCNLV 43

Query: 192 LYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKS 251
           LY  N         WA  T             L P+GVL +++       +++S  +   
Sbjct: 44  LYDNN------NPIWATNTGGLGNGCR---AVLQPDGVLVVITNEN--VTVWQSPVA--- 89

Query: 252 MNETVIYRTTLDSDGILRLYS 272
             +   Y   L  D  + +Y 
Sbjct: 90  -GKAGHYVLVLQPDRNVVIYG 109

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119

 Score = 53.8 bits (129), Expect = 5e-09
 Identities = 21/143 (14%), Positives = 41/143 (28%), Gaps = 35/143 (24%)

Query: 70  TSPNITVVWTANRDEQPMPSNA-TLALTMDGKLILKTEESKEKPIADLVFDEPASFASML 128
              +  ++      E    ++     +  D  L+L  + +      +         A + 
Sbjct: 10  DDNHPQILHATESLEILFGTHVYRFIMQTDCNLVL-YDNNNPIWATNTGGLGNGCRAVLQ 68

Query: 129 DSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDG 188
             G  V+ +N +  +W+S                               G + L +Q D 
Sbjct: 69  PDGVLVVITNENVTVWQS-------------------------PVAGKAGHYVLVLQPDR 103

Query: 189 NIVLYPRNMLNKALEAYWANGTD 211
           N+V+Y          A WA  T 
Sbjct: 104 NVVIYGD--------ALWATQTV 118

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 61.6 bits (150), Expect = 2e-10
 Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 8/93 (8%)

Query: 519 VARGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGS 577
           V   + + H      ++H DIK  NILID     AK+ DFG   LL            G+
Sbjct: 148 VVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDFDGT 201

Query: 578 RGYMAPEW-QNSGLITVKSDVYSFGVVLLEIIC 609
           R Y  PEW        + + V+S G++L +++C
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVC 234

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 61.8 bits (151), Expect = 2e-10
 Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 30/148 (20%)

Query: 481 SSKKL-LVYEFMSKGSLADLLFNLETRPLWR-DRVRI-ALDVARGLLYLHDECEVQIIHC 537
           +  KL L+ +F+  G   DL   L    ++  + V+    ++A  L +LH    + II+ 
Sbjct: 97  TEGKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGIIYR 150

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLIT 592
           D+K  NIL+D+    K++DFGL+K        I    +     G+  YMAPE     ++ 
Sbjct: 151 DLKPENILLDEEGHIKLTDFGLSKE------SIDHEKKAYSFCGTVEYMAPE-----VVN 199

Query: 593 VKS-----DVYSFGVVLLEIICCRSNFE 615
            +      D +SFGV++ E++     F+
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQ 227

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 61.1 bits (149), Expect = 2e-10
 Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 24/145 (16%)

Query: 477 YKHRSSKKL--LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLYL 526
           Y HR    +  L  E+ S G L D +            + +    A+        G++YL
Sbjct: 71  YGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPDAQRFFHQLMAGVVYL 121

Query: 527 HDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-GSRGYMAPE- 584
           H      I H DIK  N+L+D+    KISDFGLA +   N    +     G+  Y+APE 
Sbjct: 122 HGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178

Query: 585 WQNSGLITVKSDVYSFGVVLLEIIC 609
            +         DV+S G+VL  ++ 
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLA 203

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 61.4 bits (150), Expect = 2e-10
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 30/148 (20%)

Query: 481 SSKKL-LVYEFMSKGSLADLLFNLETRPLWR-DRVRI-ALDVARGLLYLHDECEVQIIHC 537
           +  KL L+ E++S G   +L   LE   ++  D       +++  L +LH +    II+ 
Sbjct: 92  TGGKLYLILEYLSGG---ELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYR 145

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLIT 592
           D+K  NI+++     K++DFGL K        I  G       G+  YMAPE     ++ 
Sbjct: 146 DLKPENIMLNHQGHVKLTDFGLCKE------SIHDGTVTHTFCGTIEYMAPE-----ILM 194

Query: 593 VKS-----DVYSFGVVLLEIICCRSNFE 615
                   D +S G ++ +++     F 
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFT 222

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 61.9 bits (151), Expect = 2e-10
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 30/148 (20%)

Query: 481 SSKKL-LVYEFMSKGSLADLLFNLE-TRPLWRDRVRI-ALDVARGLLYLHDECEVQIIHC 537
           ++ KL  V ++++ G   +L ++L+  R     R R  A ++A  L YLH    + I++ 
Sbjct: 110 TADKLYFVLDYINGG---ELFYHLQRERCFLEPRARFYAAEIASALGYLH---SLNIVYR 163

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-----GSRGYMAPEWQNSGLIT 592
           D+K  NIL+D      ++DFGL K        I          G+  Y+APE     ++ 
Sbjct: 164 DLKPENILLDSQGHIVLTDFGLCKE------NIEHNSTTSTFCGTPEYLAPE-----VLH 212

Query: 593 VKS-----DVYSFGVVLLEIICCRSNFE 615
            +      D +  G VL E++     F 
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPFY 240

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109

 Score = 57.2 bits (138), Expect = 2e-10
 Identities = 27/121 (22%), Positives = 46/121 (38%), Gaps = 24/121 (19%)

Query: 152 DTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTD 211
           + +  G++L  GE L         + GR+   MQED N+VLY  +      +  WA  T 
Sbjct: 2   NILYSGETLSPGEFL---------NNGRYVFIMQEDCNLVLYDVD------KPIWATNTG 46

Query: 212 IQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLY 271
                 +   L++  +G L + S            ++  +  E   Y   L  D  + +Y
Sbjct: 47  GLDRRCH---LSMQSDGNLVVYSPR------NNPIWASNTGGENGNYVCVLQKDRNVVIY 97

Query: 272 S 272
            
Sbjct: 98  G 98

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109

 Score = 49.9 bits (119), Expect = 9e-08
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 16/93 (17%)

Query: 127 MLDSGNFVLYSNRSGIIWESFSTPTDTIL-------GGQSLENGEHLLSSVTETNSSTGR 179
           M +  N VLY +    IW + +   D          G   + +  +     + T    G 
Sbjct: 25  MQEDCNLVLY-DVDKPIWATNTGGLDRRCHLSMQSDGNLVVYSPRNNPIWASNTGGENGN 83

Query: 180 FCLNMQEDGNIVLYPRNMLNKALEAYWANGTDI 212
           +   +Q+D N+V+Y          A WA GT+I
Sbjct: 84  YVCVLQKDRNVVIYGT--------ARWATGTNI 108

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 61.5 bits (150), Expect = 2e-10
 Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 10/125 (8%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLW---RDRVRIALDVARGLLYLHDECEVQIIHCDIKLR 542
           +V+EFM    L   +                     +   L Y HD     IIH D+K  
Sbjct: 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPH 159

Query: 543 NILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
            +L+   ++S   K+  FG+A  L  +   +  G  G+  +MAPE           DV+ 
Sbjct: 160 CVLLASKENSAPVKLGGFGVAIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWG 218

Query: 600 FGVVL 604
            GV+L
Sbjct: 219 CGVIL 223

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 62.4 bits (152), Expect = 3e-10
 Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 13/105 (12%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPN 566
            D  RI   V  G+ Y+H      I+H D+K  NIL+   +     KI DFGL+     N
Sbjct: 121 HDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177

Query: 567 Q--TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC 609
                 +    G+  Y+APE    G    K DV+S GV+L  ++ 
Sbjct: 178 TKMKDRI----GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLS 217

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 61.2 bits (149), Expect = 3e-10
 Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 24/145 (16%)

Query: 477 YKHRSSKKL--LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLYL 526
           Y HR    +  L  E+ S G L D +            + +    A+        G++YL
Sbjct: 71  YGHRREGNIQYLFLEYCSGGELFDRIEP---------DIGMPEPDAQRFFHQLMAGVVYL 121

Query: 527 HDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR-GSRGYMAPE- 584
           H      I H DIK  N+L+D+    KISDFGLA +   N    +     G+  Y+APE 
Sbjct: 122 HGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178

Query: 585 WQNSGLITVKSDVYSFGVVLLEIIC 609
            +         DV+S G+VL  ++ 
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLA 203

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 61.7 bits (150), Expect = 4e-10
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 23/131 (17%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           + +E +S  +L +L+   + +      VR  A  + + L  LH     +IIHCD+K  NI
Sbjct: 176 MTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENI 231

Query: 545 LIDDSWRA--KISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE------WQNSGLITVKSD 596
           L+    R+  K+ DFG +          +     SR Y APE      +       +  D
Sbjct: 232 LLKQQGRSGIKVIDFGSSCYEHQRVYTYIQ----SRFYRAPEVILGARY------GMPID 281

Query: 597 VYSFGVVLLEI 607
           ++S G +L E+
Sbjct: 282 MWSLGCILAEL 292

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 60.9 bits (148), Expect = 5e-10
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 7/121 (5%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV E++  G L D + +        D +     +  G+ ++H      I+H D+K  NIL
Sbjct: 163 LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENIL 219

Query: 546 I--DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
               D+ + KI DFGLA+   P +   +    G+  ++APE  N   ++  +D++S GV+
Sbjct: 220 CVNRDAKQIKIIDFGLARRYKPREK--LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVI 277

Query: 604 L 604
            
Sbjct: 278 A 278

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 61.0 bits (148), Expect = 6e-10
 Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 15/132 (11%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIAL-DVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV E M     A+L   +    L  +R+   L  +  G+ +LH      IIH D+K  NI
Sbjct: 144 LVMELMD----ANL-CQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNI 195

Query: 545 LIDDSWRAKISDFGLAKLLMPNQ--TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
           ++      KI DFGLA+    +   T  V     +R Y APE           D++S G 
Sbjct: 196 VVKSDCTLKILDFGLARTAGTSFMMTPYVV----TRYYRAPEVILGMGYKENVDIWSVGC 251

Query: 603 VLLEIICCRSNF 614
           ++ E++  +  F
Sbjct: 252 IMGEMVRHKILF 263

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 60.9 bits (148), Expect = 6e-10
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 11/101 (10%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPN 566
                    +   + YLH+     IIH D+K  N+L+   ++    KI+DFG +K+L   
Sbjct: 239 ATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 295

Query: 567 QTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFGVVL 604
              ++  + G+  Y+APE      +       D +S GV+L
Sbjct: 296 S--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 334

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 59.6 bits (145), Expect = 8e-10
 Identities = 39/154 (25%), Positives = 57/154 (37%), Gaps = 39/154 (25%)

Query: 476 VYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRV---RIALDVAR--------GL 523
           V  +   +K+ +V E+   G     +          D V   R  +  A         GL
Sbjct: 74  VLYNEEKQKMYMVMEYCVCGMQE--ML---------DSVPEKRFPVCQAHGYFCQLIDGL 122

Query: 524 LYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMA 582
            YLH +    I+H DIK  N+L+      KIS  G+A+ L P          +GS  +  
Sbjct: 123 EYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179

Query: 583 PEWQNSGLIT-------VKSDVYSFGVVLLEIIC 609
           PE     +          K D++S GV L  I  
Sbjct: 180 PE-----IANGLDTFSGFKVDIWSAGVTLYNITT 208

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 61.4 bits (148), Expect = 8e-10
 Identities = 92/576 (15%), Positives = 155/576 (26%), Gaps = 160/576 (27%)

Query: 57  KQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLA-------LTMDGKLILKTEESK 109
           KQ       +  V   N   + +  + EQ  PS  T         L  D ++  K   S+
Sbjct: 74  KQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSR 133

Query: 110 EKPIAD----LVFDEPASFAS---MLDSGNFVLYSN--RS---------GIIWESFS--- 148
            +P       L+   PA       +L SG   +  +   S          I W +     
Sbjct: 134 LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193

Query: 149 TPTDTILGGQSL---------ENGEHLLSSVTETNSSTGR----FCLNMQEDGNIVLYPR 195
           +P   +   Q L            +H  +     +S              E+  +VL   
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL--L 251

Query: 196 NMLN-KALEAYWANGTDIQSEYPYSVK-LNLSPN-GVLQLLSGNKTQKILFRSSYSLKSM 252
           N+ N KA  A+     ++        K L  +    V   LS   T  I      SL   
Sbjct: 252 NVQNAKAWNAF-----NLSC------KILLTTRFKQVTDFLSAATTTHI------SLDHH 294

Query: 253 NETVIYRTTLDSDGILRLYSHHFKNDGNSTVGIEWSALEKQCVVKGF------CG--LNS 304
           + T+   T  +   +L  Y           +      L ++ V+             +  
Sbjct: 295 SMTL---TPDEVKSLLLKY-----------LDCRPQDLPRE-VLTTNPRRLSIIAESIRD 339

Query: 305 YCSTSTNISTKGDCHCFRGFNFINPKMKFLGCYRNFSDEEGCKRKMPAEFY------NIT 358
             +T  N         ++  N                  E   RKM           +I 
Sbjct: 340 GLATWDN---------WKHVNCDKLTTIIESSLNVLEPAE--YRKMFDRLSVFPPSAHIP 388

Query: 359 S--LKITWLGGLPYAKLSVSKKDCSKSCLN-----------DCYFGAAFYSDGACSKHKF 405
           +  L + W   +    + V  K    S +              Y       +   + H+ 
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRS 448

Query: 406 PLMFATKDQYASAILFIKWSSGQANLS----THRIAPPIG--------NDKVNDKRKLL- 452
            +     D Y     F         L     +H     IG         +++   R +  
Sbjct: 449 IV-----DHYNIPKTFDSDDLIPPYLDQYFYSH-----IGHHLKNIEHPERMTLFRMVFL 498

Query: 453 ------------TVLAGCLGSITFLCFLIAISSLLVYKHRSSKKLLVYEFMSKGSLADLL 500
                       +      GSI        +  L  YK         YE +   ++ D L
Sbjct: 499 DFRFLEQKIRHDSTAWNASGSILNT-----LQQLKFYKPYICDNDPKYERLVN-AILDFL 552

Query: 501 FNLET---RPLWRDRVRIALDVARGLLYLHDECEVQ 533
             +E       + D +RIAL      ++     +VQ
Sbjct: 553 PKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQ 588

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.2 bits (119), Expect = 2e-06
 Identities = 53/336 (15%), Positives = 98/336 (29%), Gaps = 109/336 (32%)

Query: 13  TVSEIIRAAQN--HQLKSTISLGSSLSPSGQHSWNSS----SGLFQFGFYKQGSGYSL-- 64
           +   ++   Q   +Q+    +  S  S + +   +S       L +   Y+      L  
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN----CLLV 249

Query: 65  --GIW--------------LVTSPNITVVWTANRDEQPMPSNATLALTMDGKLI-LKTEE 107
              +               L+T+    V          + +  T  +++D   + L  +E
Sbjct: 250 LLNVQNAKAWNAFNLSCKILLTTRFKQVT-------DFLSAATTTHISLDHHSMTLTPDE 302

Query: 108 SKE---KPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGE 164
            K    K +     D P     +L +    L      II ES      T       +N +
Sbjct: 303 VKSLLLKYLDCRPQDLPRE---VLTTNPRRL-----SIIAESIRDGLATW------DNWK 348

Query: 165 HL-LSSVTETNSSTGRFCLNMQEDG-------NIVLYPRNML--NKALEAYWANGTDIQS 214
           H+    +T    S     LN+ E          + ++P +       L   W +      
Sbjct: 349 HVNCDKLTTIIES----SLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDV 404

Query: 215 EYPYSVKLNLSPNGVLQLLSGNKT--QKILFRSSYSL---------KSMNETVIYRTTLD 263
                         V+  L    +  +K    S+ S+         K  NE  ++R+ +D
Sbjct: 405 MV------------VVNKLH-KYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD 451

Query: 264 SDGILR---------------LYSH---HFKNDGNS 281
              I +                YSH   H KN  + 
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHP 487

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 59.1 bits (144), Expect = 9e-10
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 12/100 (12%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPN 566
            D       +   + Y H      I+H ++K  N+L+         K++DFGLA  +  +
Sbjct: 105 ADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161

Query: 567 Q--TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           +   G      G+ GY++PE       +   D+++ GV+L
Sbjct: 162 EAWHGFA----GTPGYLSPEVLKKDPYSKPVDIWACGVIL 197

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 59.7 bits (145), Expect = 1e-09
 Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 32/150 (21%)

Query: 481 SSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLYLHDECE 531
           +   L ++ E+ S G L + + N           R + D AR        G+ Y H    
Sbjct: 87  TPTHLAIIMEYASGGELYERICN---------AGRFSEDEARFFFQQLLSGVSYCHSM-- 135

Query: 532 VQIIHCDIKLRNILIDDSW--RAKISDFGLAKLLMPN---QTGIVAGVRGSRGYMAPE-W 585
            QI H D+KL N L+D S   R KI DFG +K  + +   ++ +     G+  Y+APE  
Sbjct: 136 -QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-----GTPAYIAPEVL 189

Query: 586 QNSGLITVKSDVYSFGVVLLEIICCRSNFE 615
                    +DV+S GV L  ++     FE
Sbjct: 190 LRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 59.3 bits (144), Expect = 2e-09
 Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 21/130 (16%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV+E +S  +L DLL N   R +  +  R  A  +   LL+L    E+ IIHCD+K  NI
Sbjct: 133 LVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENI 190

Query: 545 LIDDSWRA--KISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE------WQNSGLITVKSD 596
           L+ +  R+  KI DFG +  L       +     SR Y +PE      +       +  D
Sbjct: 191 LLCNPKRSAIKIVDFGSSCQLGQRIYQYIQ----SRFYRSPEVLLGMPY------DLAID 240

Query: 597 VYSFGVVLLE 606
           ++S G +L+E
Sbjct: 241 MWSLGCILVE 250

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 59.3 bits (144), Expect = 2e-09
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 12/100 (12%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPN 566
            D       +   + Y H      I+H ++K  N+L+         K++DFGLA  +  +
Sbjct: 128 ADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184

Query: 567 Q--TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           +   G      G+ GY++PE       +   D+++ GV+L
Sbjct: 185 EAWHGFA----GTPGYLSPEVLKKDPYSKPVDIWACGVIL 220

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 58.4 bits (142), Expect = 2e-09
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 17/102 (16%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPN 566
            D  RI  DV   + Y H      + H D+K  N L          K+ DFGLA    P 
Sbjct: 106 SDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162

Query: 567 Q--TGIVAGVRGSRGYMAPE--WQNSGLITVKSDVYSFGVVL 604
           +     V    G+  Y++P+      G    + D +S GV++
Sbjct: 163 KMMRTKV----GTPYYVSPQVLEGLYGP---ECDEWSAGVMM 197

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110

 Score = 54.8 bits (132), Expect = 2e-09
 Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 23/121 (19%)

Query: 152 DTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTD 211
           +++    SL  G  L             + L MQ D N VLY         +  WA+ T 
Sbjct: 2   NSLSSPNSLFTGHSL--------EVGPSYRLIMQGDCNFVLYDSG------KPVWASNTG 47

Query: 212 IQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLY 271
                       L  NG L +   +++ ++++++    K+  +   Y   L  D  + +Y
Sbjct: 48  GLGSGCRLT---LHNNGNLVIY--DQSNRVIWQT----KTNGKEDHYVLVLQQDRNVVIY 98

Query: 272 S 272
            
Sbjct: 99  G 99

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110

 Score = 53.7 bits (129), Expect = 5e-09
 Identities = 21/121 (17%), Positives = 43/121 (35%), Gaps = 34/121 (28%)

Query: 90  NATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFST 149
           +  L +  D   +L  +  K    ++          ++ ++GN V+Y   + +IW++   
Sbjct: 21  SYRLIMQGDCNFVL-YDSGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQSNRVIWQT--- 76

Query: 150 PTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANG 209
                                 +TN     + L +Q+D N+V+Y            WA G
Sbjct: 77  ----------------------KTNGKEDHYVLVLQQDRNVVIYGP--------VVWATG 106

Query: 210 T 210
           +
Sbjct: 107 S 107

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 58.9 bits (143), Expect = 2e-09
 Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 12/131 (9%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLW-RDRVRIALDVARGLLYLHDECEVQIIHC 537
           H     L++ E M  G L   +     +    R+   I  D+   + +LH      I H 
Sbjct: 96  HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHR 152

Query: 538 DIKLRNILI---DDSWRAKISDFGLAKLLMPNQ-TGIVAGVRGSRGYMAPEWQNSGLITV 593
           D+K  N+L    +     K++DFG AK    N           +  Y+APE         
Sbjct: 153 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPC----YTPYYVAPEVLGPEKYDK 208

Query: 594 KSDVYSFGVVL 604
             D++S GV++
Sbjct: 209 SCDMWSLGVIM 219

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 58.4 bits (142), Expect = 2e-09
 Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 17/102 (16%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPN 566
            D  RI   V  G+ Y+H      I+H D+K  NIL+   +     KI DFGL+     N
Sbjct: 121 HDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177

Query: 567 Q--TGIVAGVRGSRGYMAPE--WQNSGLITVKSDVYSFGVVL 604
                 +    G+  Y+APE           K DV+S GV+L
Sbjct: 178 TKMKDRI----GTAYYIAPEVLRGTYDE---KCDVWSAGVIL 212

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 58.8 bits (143), Expect = 2e-09
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 25/140 (17%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V + M      DL   L+T+ L  D +      + RGL Y+H      ++H D+K  N+
Sbjct: 107 IVQDLME----TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNL 159

Query: 545 LIDDSWRAKISDFGLAKLLMPNQ------TGIVAGVRGSRGYMAPE----WQNSGLITVK 594
           L++ +   KI DFGLA++  P+       T  VA    +R Y APE     +     T  
Sbjct: 160 LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA----TRWYRAPEIMLNSKG---YTKS 212

Query: 595 SDVYSFGVVLLEIICCRSNF 614
            D++S G +L E++  R  F
Sbjct: 213 IDIWSVGCILAEMLSNRPIF 232

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 57.6 bits (140), Expect = 3e-09
 Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 29/136 (21%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLYLHDECEVQIIHC 537
           +V E++S G L D +             R+    AR         + Y H      ++H 
Sbjct: 88  MVMEYVSGGELFDYICK---------HGRVEEMEARRLFQQILSAVDYCHRHM---VVHR 135

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPN---QTGIVAGVRGSRGYMAPE-WQNSGLITV 593
           D+K  N+L+D    AKI+DFGL+ ++      +T       GS  Y APE          
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC-----GSPNYAAPEVISGRLYAGP 190

Query: 594 KSDVYSFGVVLLEIIC 609
           + D++S GV+L  ++C
Sbjct: 191 EVDIWSCGVILYALLC 206

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 58.1 bits (141), Expect = 3e-09
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 8/99 (8%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI----DDSWRAKISDFGLAKLLMP 565
           R+   +   + + + YLH +    ++H D+K  NIL      +    +I DFG AK L  
Sbjct: 116 REASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172

Query: 566 NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
              G++     +  ++APE           D++S GV+L
Sbjct: 173 EN-GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLL 210

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 58.1 bits (141), Expect = 3e-09
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 15/103 (14%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPN 566
                    +   + YLH+     IIH D+K  N+L+   ++    KI+DFG +K+L   
Sbjct: 114 ATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170

Query: 567 Q--TGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFGVVL 604
                +     G+  Y+APE      +       D +S GV+L
Sbjct: 171 SLMRTLC----GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 58.1 bits (141), Expect = 3e-09
 Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 23/132 (17%)

Query: 486 LVYEFMSKGSLADL--LFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLR 542
           LV E M      DL  + + +   +    ++     +  GL  LH+     ++H D+   
Sbjct: 111 LVTELMR----TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPG 163

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQ--TGIVAGVRGSRGYMAPE----WQNSGLITVKSD 596
           NIL+ D+    I DF LA+    +   T  V      R Y APE    ++     T   D
Sbjct: 164 NILLADNNDITICDFNLAREDTADANKTHYVT----HRWYRAPELVMQFKG---FTKLVD 216

Query: 597 VYSFGVVLLEII 608
           ++S G V+ E+ 
Sbjct: 217 MWSAGCVMAEMF 228

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 57.7 bits (140), Expect = 4e-09
 Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 26/141 (18%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V E+M      DL   LE  PL  +  R     + RGL Y+H      ++H D+K  N+
Sbjct: 99  IVQEYME----TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANL 151

Query: 545 LIDDSW-RAKISDFGLAKLLMPNQ------TGIVAGVRGSRGYMAPE----WQNSGLITV 593
            I+      KI DFGLA+++ P+       +  +     ++ Y +P       N    T 
Sbjct: 152 FINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV----TKWYRSPRLLLSPNN---YTK 204

Query: 594 KSDVYSFGVVLLEIICCRSNF 614
             D+++ G +  E++  ++ F
Sbjct: 205 AIDMWAAGCIFAEMLTGKTLF 225

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 57.6 bits (140), Expect = 4e-09
 Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 21/104 (20%)

Query: 471 ISSLLVYKH----------RSSKKL-LVYEFMSKGSLADLLFNLETRP--LWRDRVR-IA 516
           I  L   KH          R  ++L LV+E+        +L  L+     +    V+ I 
Sbjct: 53  IRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDH----TVLHELDRYQRGVPEHLVKSIT 108

Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA 560
               + + + H       IH D+K  NILI      K+ DFG A
Sbjct: 109 WQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFA 149

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 57.7 bits (140), Expect = 4e-09
 Identities = 40/138 (28%), Positives = 55/138 (39%), Gaps = 28/138 (20%)

Query: 486 LVYEFMSKGSLADLL-----FNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIK 540
           LV+E M  GS+   +     FN E      +   +  DVA  L +LH++    I H D+K
Sbjct: 88  LVFEKMRGGSILSHIHKRRHFN-E-----LEASVVVQDVASALDFLHNK---GIAHRDLK 138

Query: 541 LRNILI---DDSWRAKISDFGLAKLLMPNQTGIVAGVR------GSRGYMAPEWQNSGLI 591
             NIL    +     KI DF L   +  N               GS  YMAPE   +   
Sbjct: 139 PENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSE 198

Query: 592 TVKS-----DVYSFGVVL 604
                    D++S GV+L
Sbjct: 199 EASIYDKRCDLWSLGVIL 216

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 57.7 bits (140), Expect = 5e-09
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 7/98 (7%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPN 566
            +   I   +   + ++HD     ++H D+K  N+L    +D+   KI DFG A+L  P+
Sbjct: 106 TEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162

Query: 567 QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
               +     +  Y APE  N        D++S GV+L
Sbjct: 163 N-QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVIL 199

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 56.9 bits (138), Expect = 6e-09
 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 20/129 (15%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLW---RDRVRIALDVARGLLYLHDECEVQIIHCDIKLR 542
           +V E    G L + + + + R           +   +   L Y H +    ++H D+K  
Sbjct: 97  IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPE 153

Query: 543 NILI---DDSWRAKISDFGLAKLLMPNQ--TGIVAGVRGSRGYMAPE--WQNSGLITVKS 595
           NIL          KI DFGLA+L   ++  T       G+  YMAPE   ++      K 
Sbjct: 154 NILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA----GTALYMAPEVFKRDVTF---KC 206

Query: 596 DVYSFGVVL 604
           D++S GVV+
Sbjct: 207 DIWSAGVVM 215

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 57.2 bits (139), Expect = 6e-09
 Identities = 42/149 (28%), Positives = 58/149 (38%), Gaps = 34/149 (22%)

Query: 471 ISSLLVYKH----------RSSKKL-LVYEFMSKGSLADLLFNLETRP--LWRDRVR-IA 516
           I  L   +H          +  K+  LV+EF+       +L +LE  P  L    V+   
Sbjct: 75  IKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH----TILDDLELFPNGLDYQVVQKYL 130

Query: 517 LDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL---MPNQTGIVAG 573
             +  G+ + H      IIH DIK  NIL+  S   K+ DFG A+ L          VA 
Sbjct: 131 FQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA- 186

Query: 574 VRGSRGYMAPEWQNSGLITVKSDVYSFGV 602
              +R Y APE      + V    Y   V
Sbjct: 187 ---TRWYRAPE------LLVGDVKYGKAV 206

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 57.0 bits (138), Expect = 8e-09
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 14/101 (13%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPN 566
           R+   I   +   + YLH      I H D+K  N+L      +   K++DFG AK    +
Sbjct: 161 REASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217

Query: 567 QTGIVAGVRGSRGYMAPE---WQNSGLITVKSDVYSFGVVL 604
            +  +     +  Y+APE    +         D++S GV++
Sbjct: 218 NS--LTTPCYTPYYVAPEVLGPEKYDK---SCDMWSLGVIM 253

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 56.7 bits (137), Expect = 9e-09
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 519 VARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSR 578
           +   + YL  +    IIH DIK  NI+I + +  K+ DFG A  L      +     G+ 
Sbjct: 139 LVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG--KLFYTFCGTI 193

Query: 579 GYMAPE-WQNSGLITVKSDVYSFGVVLLEIIC 609
            Y APE    +     + +++S GV L  ++ 
Sbjct: 194 EYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF 225

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 57.3 bits (139), Expect = 9e-09
 Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 7/98 (7%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPN 566
            D       +   +L+ H      ++H ++K  N+L+         K++DFGLA  +   
Sbjct: 110 ADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166

Query: 567 QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           Q     G  G+ GY++PE           D+++ GV+L
Sbjct: 167 QQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 56.5 bits (137), Expect = 1e-08
 Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 12/98 (12%)

Query: 522 GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ---TGIVAGVRGSR 578
            + Y H      I+H D+K  N+L+DD+   KI+DFGL+ ++       T       GS 
Sbjct: 120 AIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC-----GSP 171

Query: 579 GYMAPE-WQNSGLITVKSDVYSFGVVLLEIICCRSNFE 615
            Y APE          + DV+S G+VL  ++  R  F+
Sbjct: 172 NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 56.1 bits (136), Expect = 1e-08
 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 7/86 (8%)

Query: 479 HRSSKKLLVYEFMS---KGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQI 534
           H  +K  LV+EFM    K  +         R L  + V+     + +GL + H+    +I
Sbjct: 73  HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KI 129

Query: 535 IHCDIKLRNILIDDSWRAKISDFGLA 560
           +H D+K +N+LI+   + K+ DFGLA
Sbjct: 130 LHRDLKPQNLLINKRGQLKLGDFGLA 155

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 56.7 bits (137), Expect = 1e-08
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 29/142 (20%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR--------GLLYLHDECEVQIIHC 537
           +V E++S G L D +             R+    +R        G+ Y H      ++H 
Sbjct: 93  MVMEYVSGGELFDYICK---------NGRLDEKESRRLFQQILSGVDYCHRHM---VVHR 140

Query: 538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQ---TGIVAGVRGSRGYMAPE-WQNSGLITV 593
           D+K  N+L+D    AKI+DFGL+ ++   +   T       GS  Y APE          
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC-----GSPNYAAPEVISGRLYAGP 195

Query: 594 KSDVYSFGVVLLEIICCRSNFE 615
           + D++S GV+L  ++C    F+
Sbjct: 196 EVDIWSSGVILYALLCGTLPFD 217

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 55.6 bits (135), Expect = 2e-08
 Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHC 537
           H  +K  LV+EF+ +  L   +       +    ++     + +GL + H     +++H 
Sbjct: 72  HTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHR 127

Query: 538 DIKLRNILIDDSWRAKISDFGLAK 561
           D+K +N+LI+     K++DFGLA+
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLAR 151

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 55.3 bits (134), Expect = 2e-08
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 5/77 (6%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV+E + +  L   L       L  + ++ +     RGL +LH      I+H D+K  NI
Sbjct: 96  LVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENI 151

Query: 545 LIDDSWRAKISDFGLAK 561
           L+      K++DFGLA+
Sbjct: 152 LVTSGGTVKLADFGLAR 168

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 56.1 bits (135), Expect = 2e-08
 Identities = 36/180 (20%), Positives = 59/180 (32%), Gaps = 57/180 (31%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V+E +    L   +     + L    V+ I   V +GL YLH +C  +IIH DIK  NI
Sbjct: 122 MVFEVLGH-HLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENI 178

Query: 545 LI-------------------------------------------------DDSWRAKIS 555
           L+                                                  +  + KI+
Sbjct: 179 LLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIA 238

Query: 556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFE 615
           D G A  +  + T  +     +R Y + E          +D++S   +  E+      FE
Sbjct: 239 DLGNACWVHKHFTEDI----QTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFE 294

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 55.4 bits (134), Expect = 2e-08
 Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 17/95 (17%)

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRA-KISDFGLAKLLMPNQ--TGIVAGVRGS 577
           + L Y H    + I+H D+K  N++ID   R  ++ D+GLA+   P Q     VA    S
Sbjct: 141 KALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA----S 193

Query: 578 RGYMAPE----WQNSGLITVKSDVYSFGVVLLEII 608
           R +  PE    +Q         D++S G +L  +I
Sbjct: 194 RYFKGPELLVDYQM---YDYSLDMWSLGCMLASMI 225

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 55.3 bits (134), Expect = 3e-08
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV+E + +  L   L  +    +  + ++ +   + RGL +LH      ++H D+K +NI
Sbjct: 96  LVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNI 151

Query: 545 LIDDSWRAKISDFGLAK 561
           L+  S + K++DFGLA+
Sbjct: 152 LVTSSGQIKLADFGLAR 168

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 54.2 bits (131), Expect = 6e-08
 Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 24/143 (16%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           ++ E M      DL   + T+ L  D ++       R +  LH      +IH D+K  N+
Sbjct: 91  IIQELMQ----TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNL 143

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS---------RGYMAPE----WQNSGLI 591
           LI+ +   K+ DFGLA+++  +                    R Y APE           
Sbjct: 144 LINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAK---Y 200

Query: 592 TVKSDVYSFGVVLLEIICCRSNF 614
           +   DV+S G +L E+   R  F
Sbjct: 201 SRAMDVWSCGCILAELFLRRPIF 223

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 53.8 bits (130), Expect = 8e-08
 Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 39/157 (24%)

Query: 467 FLIAISSLLVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR---- 521
           FL+     L +  + +  L +V E+++ G +   L         R   R +   AR    
Sbjct: 102 FLVK----LEFSFKDNSNLYMVMEYVAGGEMFSHL---------RRIGRFSEPHARFYAA 148

Query: 522 ----GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS 577
                  YLH      +I+ D+K  N+LID     +++DFG AK +   +T  +    G+
Sbjct: 149 QIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWTLC---GT 201

Query: 578 RGYMAPEWQNSGLITVKS-----DVYSFGVVLLEIIC 609
              +APE     +I  K      D ++ GV++ E+  
Sbjct: 202 PEALAPE-----IILSKGYNKAVDWWALGVLIYEMAA 233

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 53.5 bits (129), Expect = 1e-07
 Identities = 21/108 (19%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           LV+++M      DL   +    L     + +   + + + YLH      ++H D+K  NI
Sbjct: 88  LVFDYME----TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNI 140

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLIT 592
           L++     K++DFGL++  +  +                   +  ++T
Sbjct: 141 LLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 52.5 bits (127), Expect = 2e-07
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 39/157 (24%)

Query: 467 FLIAISSLLVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVAR---- 521
           F+I     +    + ++++ ++ +++  G   +L   L      R   R    VA+    
Sbjct: 67  FIIR----MWGTFQDAQQIFMIMDYIEGG---ELFSLL------RKSQRFPNPVAKFYAA 113

Query: 522 ----GLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGS 577
                L YLH +    II+ D+K  NIL+D +   KI+DFG AK + P+ T  +    G+
Sbjct: 114 EVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVTYTLC---GT 166

Query: 578 RGYMAPEWQNSGLITVKS-----DVYSFGVVLLEIIC 609
             Y+APE     +++ K      D +SFG+++ E++ 
Sbjct: 167 PDYIAPE-----VVSTKPYNKSIDWWSFGILIYEMLA 198

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 52.1 bits (126), Expect = 2e-07
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 10/86 (11%)

Query: 479 HRSSKKLLVYEFMSKGSLADL--LFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQII 535
           H   + +LV+E + +    DL  L ++    L     +   L +  G+ Y HD    +++
Sbjct: 70  HTKKRLVLVFEHLDQ----DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAK 561
           H D+K +N+LI+     KI+DFGLA+
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR 148

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 52.1 bits (126), Expect = 2e-07
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 10/86 (11%)

Query: 479 HRSSKKLLVYEFMSKGSLADL--LFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQII 535
           H   K  LV+EF  +    DL   F+     L  + V+     + +GL + H      ++
Sbjct: 71  HSDKKLTLVFEFCDQ----DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVL 123

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAK 561
           H D+K +N+LI+ +   K+++FGLA+
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLAR 149

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 52.2 bits (126), Expect = 2e-07
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 10/86 (11%)

Query: 479 HRSSKKLLVYEFMSKGSLADL--LFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQII 535
           H      LV+EFM K    DL  + +     L   +++     + RG+ + H     +I+
Sbjct: 89  HSERCLTLVFEFMEK----DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RIL 141

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAK 561
           H D+K +N+LI+     K++DFGLA+
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLAR 167

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 51.9 bits (125), Expect = 4e-07
 Identities = 37/147 (25%), Positives = 57/147 (38%), Gaps = 40/147 (27%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           + +E + K +  + L     +P     VR +A  +   L +LH+    Q+ H D+K  NI
Sbjct: 99  IAFELLGK-NTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENI 154

Query: 545 LIDDSWRA-------------------KISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE- 584
           L  +S                      +++DFG A     + T IVA    +R Y  PE 
Sbjct: 155 LFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVA----TRHYRPPEV 210

Query: 585 -----WQNSGLITVKSDVYSFGVVLLE 606
                W          DV+S G +L E
Sbjct: 211 ILELGW------AQPCDVWSIGCILFE 231

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 51.5 bits (124), Expect = 5e-07
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 4/92 (4%)

Query: 469 IAISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHD 528
           I  +    Y        LV++F     LA LL N+  +    +  R+   +  GL Y+H 
Sbjct: 84  ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 142

Query: 529 ECEVQIIHCDIKLRNILIDDSWRAKISDFGLA 560
               +I+H D+K  N+LI      K++DFGLA
Sbjct: 143 N---KILHRDMKAANVLITRDGVLKLADFGLA 171

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 51.0 bits (122), Expect = 7e-07
 Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 23/103 (22%)

Query: 476 VYKHRSSKKL-LVYEFMSKGSLADLLFNLET-RPLWRDRVRIALDVA----------RGL 523
           V+   + +K+ L++++       DL   ++  R    ++  + L              G+
Sbjct: 86  VFLSHADRKVWLLFDYAEH----DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI 141

Query: 524 LYLHDECEVQIIHCDIKLRNILIDDSWRA----KISDFGLAKL 562
            YLH      ++H D+K  NIL+          KI+D G A+L
Sbjct: 142 HYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 50.7 bits (122), Expect = 8e-07
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 10/86 (11%)

Query: 479 HRSSKKLLVYEFMSKGSLADL--LFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQII 535
           H      LV+E++ K    DL    +     +    V+     + RGL Y H +   +++
Sbjct: 70  HTEKSLTLVFEYLDK----DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVL 122

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAK 561
           H D+K +N+LI++    K++DFGLA+
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLAR 148

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 49.6 bits (119), Expect = 2e-06
 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 14/90 (15%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLET-RPLWRDRVR-IALDVARGLLYLHDECEVQIIH 536
           H + +  L++E+       DL   ++    +    ++     +  G+ + H     + +H
Sbjct: 103 HHNHRLHLIFEYAEN----DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLH 155

Query: 537 CDIKLRNILIDDSWRA-----KISDFGLAK 561
            D+K +N+L+  S  +     KI DFGLA+
Sbjct: 156 RDLKPQNLLLSVSDASETPVLKIGDFGLAR 185

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 40/147 (27%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +V+E +   S  D +      P   D +R +A  + + + +LH     ++ H D+K  NI
Sbjct: 94  IVFELLGL-STYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENI 149

Query: 545 LIDDSWRA-------------------KISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE- 584
           L   S                      K+ DFG A     + + +V+    +R Y APE 
Sbjct: 150 LFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVS----TRHYRAPEV 205

Query: 585 -----WQNSGLITVKSDVYSFGVVLLE 606
                W      +   DV+S G +L+E
Sbjct: 206 ILALGW------SQPCDVWSIGCILIE 226

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 49.1 bits (118), Expect = 2e-06
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 10/86 (11%)

Query: 479 HRSSKKLLVYEFMSKGSLADL--LFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQII 535
              S   LV++FM      DL  +    +  L    ++   L   +GL YLH      I+
Sbjct: 82  GHKSNISLVFDFMET----DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WIL 134

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAK 561
           H D+K  N+L+D++   K++DFGLAK
Sbjct: 135 HRDLKPNNLLLDENGVLKLADFGLAK 160

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 48.9 bits (117), Expect = 3e-06
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 46/153 (30%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVR-IALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           L++E +   SL +++          + ++   +++ + L YL     + + H D+K  NI
Sbjct: 113 LIFEPLGP-SLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENI 168

Query: 545 LIDDSWRA-------------------------KISDFGLAKLLMPNQTGIVAGVRGSRG 579
           L+DD +                           K+ DFG A         I+     +R 
Sbjct: 169 LLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIIN----TRQ 224

Query: 580 YMAPE------WQNSGLITVKSDVYSFGVVLLE 606
           Y APE      W       V SD++SFG VL E
Sbjct: 225 YRAPEVILNLGW------DVSSDMWSFGCVLAE 251

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 47.4 bits (113), Expect = 1e-05
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ-TGIVAGVRGSRG 579
            G  ++H   E  IIH D+K  N L++     K+ DFGLA+ +   + T IV  +  +  
Sbjct: 140 LGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEE 196

Query: 580 YMAPEWQNSGLIT 592
                      +T
Sbjct: 197 PGPHNKNLKKQLT 209

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 47.5 bits (113), Expect = 1e-05
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA 560
            G+ Y+H      I+H D+K  N L++     K+ DFGLA
Sbjct: 167 VGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLA 203

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 45.3 bits (106), Expect = 4e-05
 Identities = 15/90 (16%), Positives = 25/90 (27%), Gaps = 4/90 (4%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V EF   G   DL               I   +   L         +  H D+   N+L
Sbjct: 139 IVLEFEFGGI--DLEQMRTKLSSLATAKSILHQLTASLAVAEASL--RFEHRDLHWGNVL 194

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVR 575
           +  +   K+      K       G+   + 
Sbjct: 195 LKKTSLKKLHYTLNGKSSTIPSCGLQVSII 224

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 41.1 bits (97), Expect = 7e-04
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 6/55 (10%)

Query: 510 RDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAK 561
           R+   I   +   + YLH      I H D+K  N+L      +   K++DFG AK
Sbjct: 117 REASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	702
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.98
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.98
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.98
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.98
3niz_A	311	Rhodanese family protein; structural genomics, str	99.98
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.98
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.98
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.98
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.98
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.98
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.98
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.98
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.98
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.98
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.98
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.98
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.98
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.98
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.98
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.98
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.98
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.98
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.97
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.97
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.97
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.97
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.97
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.97
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.97
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.97
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.97
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.97
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.97
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.97
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.97
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.97
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.97
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.97
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.97
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.97
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.97
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.97
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.97
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.97
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.97
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.97
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.97
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.97
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.97
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.97
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.97
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.97
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.97
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.97
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.97
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.97
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.97
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.97
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.97
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.97
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.97
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.97
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.97
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.97
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.97
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.97
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.97
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.97
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.97
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.97
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.97
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.97
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.97
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.97
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.97
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.97
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.97
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.97
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.97
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.97
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.97
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.97
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.97
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.97
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.97
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.97
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.97
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.97
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.97
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.97
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.97
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.97
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.97
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.97
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.97
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.97
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.97
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.97
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.97
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.97
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.97
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.97
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.97
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.97
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.97
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.97
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.97
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.97
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.97
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.97
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.97
3bhy_A	283	Death-associated protein kinase 3; death associate	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.97
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.97
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.97
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.97
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.97
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.97
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.97
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.97
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.97
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.97
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.97
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.97
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.97
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.97
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.97
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.97
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.97
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.97
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.97
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.96
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.96
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.96
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.96
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.96
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.96
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.96
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.96
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.96
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.96
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.96
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.96
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.96
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.96
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.96
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.96
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.96
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.96
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.96
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.96
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.96
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.96
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.96
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.96
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.96
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.96
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.96
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.96
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.96
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.96
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.96
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.96
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.96
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.96
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.96
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.96
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.96
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.96
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.95
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.95
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.95
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.95
3uqc_A	286	Probable conserved transmembrane protein; structur	99.95
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.94
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.93
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.89
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.84
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.84
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.84
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.81
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.8
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.75
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.73
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.71
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.69
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.69
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.68
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.66
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.64
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.62
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.56
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.54
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.47
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.44
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.36
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.35
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	99.31
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.27
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.22
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.2
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	99.19
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.09
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.27
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.1
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.04
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.02
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.24
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.22
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.13
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	96.89
3ats_A	357	Putative uncharacterized protein; hypothetical pro	96.74
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	96.34
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	93.03
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	92.47
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	92.21
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	91.58
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	90.57
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	86.53
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	86.45
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	84.77
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	84.75
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	83.66
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	81.45
2ll3_A	82	Micronemal protein 4; cell adhesion; NMR {Toxoplas	80.11

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=100.00  E-value=6.6e-43  Score=357.42  Aligned_cols=229  Identities=20%  Similarity=0.199  Sum_probs=182.8

Q ss_pred             ccccccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCC----CceEEEccCCc
Q 038002           25 QLKSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPS----NATLALTMDGK  100 (702)
Q Consensus        25 ~~~~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~----~~~l~~~~~g~  100 (702)
                      .+.++|.+|++|+++  ++|+|++|+|+||||.++ .+|+   |+  +.+ +||+|||+.|+.++    +++|+|+.||+
T Consensus        12 ~~~~~l~~g~~l~~~--~~l~S~~g~F~lgf~~~~-~~~l---y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~G~   82 (276)
T 3m7h_A           12 VGTSVLPAYQTLSAG--QYLLSPNQRFKLLLQGDG-NLVI---QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLAFYVQ   82 (276)
T ss_dssp             TTSSEECTTEEBCTT--CEEECTTSSEEEEECTTS-CEEE---EE--TTE-EEEECSTTSTTEEEEECCCTTCCSEEEES
T ss_pred             ccCCEecCCCEecCC--CEEEcCCCcEEEEEECCC-CeEE---EC--CCC-eEEECCCCCCcCCcccccceEEEEeCCCc
Confidence            445999999999976  899999999999999655 4566   76  777 99999999999764    78999999999


Q ss_pred             EEE--EcCCCCeeeeeccccC-----CcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCc----cCCCCeEEee
Q 038002          101 LIL--KTEESKEKPIADLVFD-----EPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQS----LENGEHLLSS  169 (702)
Q Consensus       101 L~l--~~~~~~~~w~~~~~~~-----~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~----l~~~~~L~S~  169 (702)
                      |+|  .|+++++||++++...     .++++|+|+|+|||||++  +.+||||  ||||||||||+    |..++.|   
T Consensus        83 Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~--~~~lWqS--~ptdtlLpg~~~~~~l~~g~~L---  155 (276)
T 3m7h_A           83 YGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD--SLALWNG--TPAIPLVPGAIDSLLLAPGSEL---  155 (276)
T ss_dssp             SSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE--EEEEEES--CTTSCCCCSCTTCEEECSSEEE---
T ss_pred             EEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC--CceeeCc--ccccccccccccccccccCccc---
Confidence            999  7778899999987431     346799999999999998  7899999  99999999999    7778888   


Q ss_pred             ccCCCCcccceEeeeccCCceeeeeccccccccceeecCCccccCcCcceeeeeecCCccEEEeecCccceEEeeeeeee
Q 038002          170 VTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSL  249 (702)
Q Consensus       170 ~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (702)
                      ++.+||++|.|+++|+++|++++|.     +...+||+++++....    ..+.++.+|.+.+++.++.....   ++. 
T Consensus       156 ~S~~dps~G~fsl~l~~dGnlvLy~-----~~~~~yW~Sgt~~~~~----~~l~l~~dGnLvl~d~~~~~vWs---S~t-  222 (276)
T 3m7h_A          156 VQGVVYGAGASKLVFQGDGNLVAYG-----PNGAATWNAGTQGKGA----VRAVFQGDGNLVVYGAGNAVLWH---SHT-  222 (276)
T ss_dssp             CTTCEEEETTEEEEECTTSCEEEEC-----TTSSEEEECCCTTTTC----CEEEECTTSCEEEECTTSCEEEE---CSC-
T ss_pred             ccCCCCCCceEEEeecCCceEEEEe-----CCCeEEEECCCCCCcc----EEEEEcCCCeEEEEeCCCcEEEE---ecC-
Confidence            5688999999999999999988762     2347899999985432    24788889998887765532221   121 


Q ss_pred             eccCcceEEEEEEccCCcEEEEEecccCCCCcceEEEEeecc
Q 038002          250 KSMNETVIYRTTLDSDGILRLYSHHFKNDGNSTVGIEWSALE  291 (702)
Q Consensus       250 ~~~~~~~~~rl~Ld~dG~lr~y~~~~~~~~~~~w~~~w~~p~  291 (702)
                       ...  ..+|++|+.||||++|.|      ...|...|.+|.
T Consensus       223 -~~~--~~~rl~Ld~dGnLvly~~------~~~Wqsf~~~P~  255 (276)
T 3m7h_A          223 -GGH--ASAVLRLQANGSIAILDE------KPVWARFGFQPT  255 (276)
T ss_dssp             -TTC--TTCEEEECTTSCEEEEEE------EEEEESSSCCTT
T ss_pred             -CCC--CCEEEEEcCCccEEEEcC------CCeEEccCccCC
Confidence             111  237999999999999987      123655555553

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3.3e-42  Score=362.64  Aligned_cols=224  Identities=18%  Similarity=0.153  Sum_probs=181.6

Q ss_pred             ccccceEEEeEE--EEEeeeeh--hhhHhh----------------------eeeEEEEEecCCeeEEEEecCCCCCHHH
Q 038002          445 VNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------ISSLLVYKHRSSKKLLVYEFMSKGSLAD  498 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------i~~l~~~~~~~~~~~lV~e~~~~gsL~~  498 (702)
                      +...++||+|+|  ||++....  ..||||                      |+++++++++++..|||||||+||+|.+
T Consensus        60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~  139 (336)
T 4g3f_A           60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ  139 (336)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHH
T ss_pred             eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHH
Confidence            344578999998  99988664  788888                      8999999999999999999999999999


Q ss_pred             HhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC-cEEEecccceeecCCCCCc----eeec
Q 038002          499 LLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW-RAKISDFGLAKLLMPNQTG----IVAG  573 (702)
Q Consensus       499 ~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~~~----~~~~  573 (702)
                      +|.+.+ .+++.++..++.||+.||+|||++   +|+||||||+|||++.++ ++||+|||+|+.+......    ....
T Consensus       140 ~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~  215 (336)
T 4g3f_A          140 LIKQMG-CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY  215 (336)
T ss_dssp             HHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CC
T ss_pred             HHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCc
Confidence            998765 799999999999999999999999   999999999999999987 6999999999987543221    1234


Q ss_pred             eeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHH
Q 038002          574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLE  653 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  653 (702)
                      .+||+.|+|||++.+..++.++|||||||++|||++|+.||........   ...     +......   ...++...++
T Consensus       216 ~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~~~-----i~~~~~~---~~~~~~~~s~  284 (336)
T 4g3f_A          216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL---CLK-----IASEPPP---IREIPPSCAP  284 (336)
T ss_dssp             CCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC---HHH-----HHHSCCG---GGGSCTTSCH
T ss_pred             cccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH---HHH-----HHcCCCC---chhcCccCCH
Confidence            6799999999999999999999999999999999999999975422211   111     1111110   0123445567


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          654 RMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       654 ~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      .+.+++.+||+.||++|||++||++.|+..
T Consensus       285 ~~~~li~~~L~~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          285 LTAQAIQEGLRKEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            889999999999999999999999988653

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.6e-42  Score=359.84  Aligned_cols=226  Identities=23%  Similarity=0.245  Sum_probs=174.7

Q ss_pred             cccceEEEeEE--EEEeeeehhhhHhh-----------------------------eeeEEEEEecCCeeEEEEecCCCC
Q 038002          446 NDKRKLLTVLA--GCLGSITFLCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEFMSKG  494 (702)
Q Consensus       446 ~~~~~l~~g~~--v~~~~~~~~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~~~~g  494 (702)
                      ...++||+|+|  ||+|.... .||||                             |+++++++. ++..+||||||++|
T Consensus        39 ~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gG  116 (307)
T 3omv_A           39 MLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGS  116 (307)
T ss_dssp             CEEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred             EEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCC
Confidence            34568999998  89887543 45665                             888998775 46789999999999


Q ss_pred             CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC-Cceeec
Q 038002          495 SLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ-TGIVAG  573 (702)
Q Consensus       495 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-~~~~~~  573 (702)
                      +|.++|......+++.++..|+.||++||+|||++   +||||||||+|||+++++.+||+|||+|+...... ......
T Consensus       117 sL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~  193 (307)
T 3omv_A          117 SLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ  193 (307)
T ss_dssp             BHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC------------
T ss_pred             CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecc
Confidence            99999987777899999999999999999999999   99999999999999999999999999998764332 223455


Q ss_pred             eeccccccCcccccC---CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHH
Q 038002          574 VRGSRGYMAPEWQNS---GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI  650 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  650 (702)
                      ..||+.|+|||++.+   ..++.++|||||||++|||+||+.||......   ..+..    ....+.... .....+..
T Consensus       194 ~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~---~~~~~----~~~~~~~~p-~~~~~~~~  265 (307)
T 3omv_A          194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR---DQIIF----MVGRGYASP-DLSKLYKN  265 (307)
T ss_dssp             CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH---HHHHH----HHHTTCCCC-CSTTSCTT
T ss_pred             cccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH---HHHHH----HHhcCCCCC-Cccccccc
Confidence            789999999998853   46899999999999999999999999643211   11111    111111111 01123344


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          651 TLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       651 ~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .++.+.+++.+||+.||++|||++||+++|+.+.
T Consensus       266 ~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~  299 (307)
T 3omv_A          266 CPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ  299 (307)
T ss_dssp             SCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            5678899999999999999999999999998764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.7e-41  Score=358.40  Aligned_cols=225  Identities=24%  Similarity=0.290  Sum_probs=176.9

Q ss_pred             cccceEEEeEE--EEEeeee-------hhhhHhh---------------------------eeeEEEEEecCCeeEEEEe
Q 038002          446 NDKRKLLTVLA--GCLGSIT-------FLCFLIA---------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       446 ~~~~~l~~g~~--v~~~~~~-------~~~~avk---------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      ...++||+|+|  ||+|...       ...||||                           |+++++++.+++..|||||
T Consensus        44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E  123 (329)
T 4aoj_A           44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE  123 (329)
T ss_dssp             EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            34578999998  9998753       2567887                           9999999999999999999


Q ss_pred             cCCCCCHHHHhhcCC--------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEe
Q 038002          490 FMSKGSLADLLFNLE--------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS  555 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~--------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~  555 (702)
                      ||++|+|.++|....              ..+++.+++.|+.||++||+|||++   +|+||||||+|||+++++.+||+
T Consensus       124 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~  200 (329)
T 4aoj_A          124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIG  200 (329)
T ss_dssp             CCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEEC
T ss_pred             cCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEc
Confidence            999999999997642              2488999999999999999999999   99999999999999999999999


Q ss_pred             cccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHh
Q 038002          556 DFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNC  633 (702)
Q Consensus       556 Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~  633 (702)
                      |||+++....... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||....  .  ..    ....
T Consensus       201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~--~--~~----~~~~  272 (329)
T 4aoj_A          201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS--N--TE----AIDC  272 (329)
T ss_dssp             CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC--H--HH----HHHH
T ss_pred             ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC--H--HH----HHHH
Confidence            9999987644332 22345679999999999999999999999999999999999 899996431  1  11    1111


Q ss_pred             hhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCC
Q 038002          634 FVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEI  686 (702)
Q Consensus       634 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~  686 (702)
                      +..+.     ..+.+...++++.+++.+||+.||++|||++||+++|+.+.+.
T Consensus       273 i~~g~-----~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          273 ITQGR-----ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             HHHTC-----CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHcCC-----CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            12221     1122334466789999999999999999999999999997654

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=6.6e-41  Score=353.73  Aligned_cols=219  Identities=18%  Similarity=0.224  Sum_probs=180.6

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      +.++..++||+|+|  ||++....  ..||||                           |+++++++++++..|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            44566678999998  99988764  778887                           899999999999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCcee
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIV  571 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~  571 (702)
                      +||+|.+++.+.  ++++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+|+.+..... ..
T Consensus       154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~  227 (346)
T 4fih_A          154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR  227 (346)
T ss_dssp             TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CB
T ss_pred             CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-cc
Confidence            999999999763  699999999999999999999999   999999999999999999999999999997644332 34


Q ss_pred             eceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHH
Q 038002          572 AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT  651 (702)
Q Consensus       572 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  651 (702)
                      ...+||+.|+|||++.+..|+.++|||||||++|||++|+.||....    .....    ..+........   ......
T Consensus       228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~----~~~~~----~~i~~~~~~~~---~~~~~~  296 (346)
T 4fih_A          228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP----PLKAM----KMIRDNLPPRL---KNLHKV  296 (346)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHH----HHHHHSSCCCC---SCGGGS
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC----HHHHH----HHHHcCCCCCC---CccccC
Confidence            56789999999999999999999999999999999999999996431    11111    11111110000   112334


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          652 LERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       652 ~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ++.+.+||.+||+.||++|||++|+++
T Consensus       297 s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          297 SPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            678899999999999999999999987

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2e-41  Score=358.28  Aligned_cols=219  Identities=20%  Similarity=0.254  Sum_probs=176.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEe
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      ++|+..++||+|+|  ||++....  +.||||                             |+++++++++++..|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            45677889999999  99998654  778887                             8999999999999999999


Q ss_pred             cCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          490 FMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+||+|.++|...+ ..+++.+++.++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+|+.+.... 
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-  179 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV-  179 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence            999999999997654 3478999999999999999999999   99999999999999999999999999998753211 


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                      ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||....   ...     ....+..+...     ..+
T Consensus       180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~---~~~-----~~~~i~~~~~~-----~~~  246 (350)
T 4b9d_A          180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS---MKN-----LVLKIISGSFP-----PVS  246 (350)
T ss_dssp             HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS---HHH-----HHHHHHHTCCC-----CCC
T ss_pred             ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC---HHH-----HHHHHHcCCCC-----CCC
Confidence            12345679999999999999999999999999999999999999996541   111     11112222221     123


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ...+..+.+||.+||+.||++|||++|+++
T Consensus       247 ~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            345678899999999999999999999986

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.4e-41  Score=354.26  Aligned_cols=226  Identities=24%  Similarity=0.331  Sum_probs=182.8

Q ss_pred             cccccceEEEeEE--EEEeeee-------hhhhHhh---------------------------eeeEEEEEecCCeeEEE
Q 038002          444 KVNDKRKLLTVLA--GCLGSIT-------FLCFLIA---------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~-------~~~~avk---------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      .+...++||+|+|  ||+|...       ...||||                           |+++++++.+++..|||
T Consensus        14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV   93 (299)
T 4asz_A           14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV   93 (299)
T ss_dssp             GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            3445678999999  9998753       2467877                           99999999999999999


Q ss_pred             EecCCCCCHHHHhhcCC------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEe
Q 038002          488 YEFMSKGSLADLLFNLE------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS  555 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~  555 (702)
                      ||||++|+|.++|...+            ..+++.+++.++.||++||+|||++   +|+||||||+|||+++++.+||+
T Consensus        94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~  170 (299)
T 4asz_A           94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIG  170 (299)
T ss_dssp             EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEEC
Confidence            99999999999997532            3689999999999999999999999   99999999999999999999999


Q ss_pred             cccceeecCCCCCce-eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHh
Q 038002          556 DFGLAKLLMPNQTGI-VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNC  633 (702)
Q Consensus       556 Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~  633 (702)
                      |||+|+......... .....||+.|+|||++.+..++.++|||||||++|||+| |+.||....  ..+      +...
T Consensus       171 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~--~~~------~~~~  242 (299)
T 4asz_A          171 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--NNE------VIEC  242 (299)
T ss_dssp             CCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--HHH------HHHH
T ss_pred             CcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--HHH------HHHH
Confidence            999998764433322 234679999999999999999999999999999999998 899996531  111      1112


Q ss_pred             hhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          634 FVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       634 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      +..+...     ..+...++++.+++.+||+.||++|||++||++.|+++.+
T Consensus       243 i~~~~~~-----~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~  289 (299)
T 4asz_A          243 ITQGRVL-----QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK  289 (299)
T ss_dssp             HHHTCCC-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHcCCCC-----CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            2222211     2233456688999999999999999999999999998653

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.8e-41  Score=352.78  Aligned_cols=217  Identities=17%  Similarity=0.239  Sum_probs=181.4

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +.++..+.||+|+|  ||++....  ..||+|                              |++++..+++++..||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            44666789999998  99888654  678887                              899999999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||++||+|.++|.+.+ .+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus       112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~  187 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK  187 (311)
T ss_dssp             CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred             ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence            9999999999998755 799999999999999999999999   999999999999999999999999999998754432


Q ss_pred             -ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          569 -GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       569 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                       ......+||+.|+|||++.+..|+.++||||+||++|||++|+.||....   ...     ....+.....      ..
T Consensus       188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~---~~~-----~~~~i~~~~~------~~  253 (311)
T 4aw0_A          188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN---EGL-----IFAKIIKLEY------DF  253 (311)
T ss_dssp             CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS---HHH-----HHHHHHHTCC------CC
T ss_pred             cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---HHH-----HHHHHHcCCC------CC
Confidence             33456789999999999999999999999999999999999999996431   111     1111222221      12


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSMKNVI  677 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl  677 (702)
                      +...++++.+|+.+||+.||++|||++|++
T Consensus       254 p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          254 PEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             CTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             CcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence            233456789999999999999999999863

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=4.3e-41  Score=351.96  Aligned_cols=224  Identities=21%  Similarity=0.256  Sum_probs=183.0

Q ss_pred             ccceEEEeEE--EEEeeeeh-------hhhHhh----------------------------eeeEEEEEecCCeeEEEEe
Q 038002          447 DKRKLLTVLA--GCLGSITF-------LCFLIA----------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~~-------~~~avk----------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      -.++||+|+|  ||+|....       ..||||                            |+++++++.+++..+||||
T Consensus        30 ~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E  109 (308)
T 4gt4_A           30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS  109 (308)
T ss_dssp             EEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             EeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEE
Confidence            3568999999  99998632       568887                            9999999999999999999


Q ss_pred             cCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEE
Q 038002          490 FMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKI  554 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl  554 (702)
                      ||++|+|.++|....               ..+++.+++.|+.||++||+|||++   +||||||||+|||+++++.+||
T Consensus       110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~Ki  186 (308)
T 4gt4_A          110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKI  186 (308)
T ss_dssp             CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred             cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCEEE
Confidence            999999999996532               2488999999999999999999999   9999999999999999999999


Q ss_pred             ecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHH
Q 038002          555 SDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYN  632 (702)
Q Consensus       555 ~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~  632 (702)
                      +|||+++....... .......||+.|+|||++.++.++.++|||||||++|||+| |+.||....  .  ..    +..
T Consensus       187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~--~--~~----~~~  258 (308)
T 4gt4_A          187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--N--QD----VVE  258 (308)
T ss_dssp             CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC--H--HH----HHH
T ss_pred             CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC--H--HH----HHH
Confidence            99999987643322 22345679999999999999999999999999999999998 899996541  1  11    111


Q ss_pred             hhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCC
Q 038002          633 CFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEI  686 (702)
Q Consensus       633 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~  686 (702)
                      .+..+...     +.+...+..+.+++.+||+.||++|||++||+++|+....+
T Consensus       259 ~i~~~~~~-----~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~nl  307 (308)
T 4gt4_A          259 MIRNRQVL-----PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGNL  307 (308)
T ss_dssp             HHHTTCCC-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC-
T ss_pred             HHHcCCCC-----CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccCC
Confidence            22222211     22334567789999999999999999999999999986543

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=4.7e-40  Score=355.72  Aligned_cols=219  Identities=18%  Similarity=0.224  Sum_probs=181.3

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      ++++..++||+|+|  ||++....  ..||||                           |+++++++++++.+|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            45667789999998  99988764  778887                           899999999999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCcee
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIV  571 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~  571 (702)
                      +||+|.+++...  ++++.++..++.||+.||+|||++   +|+||||||+||||+.++.+||+|||+|+.+..... ..
T Consensus       231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~  304 (423)
T 4fie_A          231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR  304 (423)
T ss_dssp             TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-CB
T ss_pred             CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-cc
Confidence            999999999754  599999999999999999999999   999999999999999999999999999997644332 34


Q ss_pred             eceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHH
Q 038002          572 AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT  651 (702)
Q Consensus       572 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  651 (702)
                      ...+||+.|+|||++.+..|+.++|||||||++|||++|+.||....    .....    ..+.......+   ......
T Consensus       305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~----~~~~~----~~i~~~~~~~~---~~~~~~  373 (423)
T 4fie_A          305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP----PLKAM----KMIRDNLPPRL---KNLHKV  373 (423)
T ss_dssp             CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHH----HHHHHSCCCCC---SCTTSS
T ss_pred             cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC----HHHHH----HHHHcCCCCCC---cccccC
Confidence            56789999999999999999999999999999999999999996431    11111    11111111000   112234


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          652 LERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       652 ~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      +..+.+||.+||+.||++|||++|+++
T Consensus       374 s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          374 SPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            668899999999999999999999987

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=4.4e-40  Score=340.58  Aligned_cols=214  Identities=23%  Similarity=0.287  Sum_probs=170.3

Q ss_pred             cccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEec----CCeeEEEE
Q 038002          446 NDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHR----SSKKLLVY  488 (702)
Q Consensus       446 ~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~----~~~~~lV~  488 (702)
                      +..++||+|+|  ||++....  ..||+|                             |+++++++++    ++..||||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            34567999998  99988764  667776                             8999988764    46789999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCC--eEecCCCCCcEEEeC-CCcEEEecccceeecCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ--IIHCDIKLRNILIDD-SWRAKISDFGLAKLLMP  565 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivH~dlkp~NIll~~-~~~~kl~Dfg~a~~~~~  565 (702)
                      |||+||+|.+++.+.. .+++.++..++.||+.||+|||++   +  |+||||||+|||++. ++.+||+|||+|+....
T Consensus       109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence            9999999999998754 799999999999999999999998   7  999999999999974 78999999999986432


Q ss_pred             CCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccc
Q 038002          566 NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE  645 (702)
Q Consensus       566 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  645 (702)
                      .   .....+||+.|+|||++.+ .++.++|||||||++|||+||+.||......   ..    .......+..+...+ 
T Consensus       185 ~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~---~~----~~~~i~~~~~~~~~~-  252 (290)
T 3fpq_A          185 S---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA---AQ----IYRRVTSGVKPASFD-  252 (290)
T ss_dssp             T---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH---HH----HHHHHTTTCCCGGGG-
T ss_pred             C---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH---HH----HHHHHHcCCCCCCCC-
Confidence            2   2345689999999998865 6999999999999999999999999643111   11    112222222211122 


Q ss_pred             ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          646 EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       646 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                         ...++++.+++.+||+.||++|||++|+++
T Consensus       253 ---~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          253 ---KVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ---GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ---ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence               223456889999999999999999999986

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=4.4e-40  Score=344.75  Aligned_cols=236  Identities=20%  Similarity=0.170  Sum_probs=179.4

Q ss_pred             ccceEEEeEE--EEEeeeehhhhHhh--------------------------eeeEEEEEecCC----eeEEEEecCCCC
Q 038002          447 DKRKLLTVLA--GCLGSITFLCFLIA--------------------------ISSLLVYKHRSS----KKLLVYEFMSKG  494 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~~~~~avk--------------------------i~~l~~~~~~~~----~~~lV~e~~~~g  494 (702)
                      -.++||+|+|  ||+|......||||                          |+++++++.+++    ..|||||||++|
T Consensus         7 L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~g   86 (303)
T 3hmm_A            7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG   86 (303)
T ss_dssp             EEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred             EEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCC
Confidence            4578999999  99999888889998                          888888776543    689999999999


Q ss_pred             CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcC-----CCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          495 SLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC-----EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       495 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      +|.++|+..  .+++.++.+++.|+++||+|||+++     ..+|+||||||+|||++.++.+||+|||+++........
T Consensus        87 sL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~  164 (303)
T 3hmm_A           87 SLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT  164 (303)
T ss_dssp             BHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE
T ss_pred             cHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCc
Confidence            999999764  5899999999999999999999752     348999999999999999999999999999877544322


Q ss_pred             ---eeeceeccccccCcccccCC------CCCccccccchhHhHHHhhhCCcCCcCCCCCcc---h----hhhHHHHHHh
Q 038002          570 ---IVAGVRGSRGYMAPEWQNSG------LITVKSDVYSFGVVLLEIICCRSNFEVNVSTAD---E----VLLSTWVYNC  633 (702)
Q Consensus       570 ---~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~---~----~~~~~~~~~~  633 (702)
                         ......||+.|+|||++.+.      .++.++|||||||++|||+||..||........   .    ..........
T Consensus       165 ~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  244 (303)
T 3hmm_A          165 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV  244 (303)
T ss_dssp             ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHH
T ss_pred             eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHH
Confidence               12346799999999988654      467899999999999999999888754321110   0    0001111111


Q ss_pred             hhcccccccccc-ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          634 FVAGEFNKLVEE-EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       634 ~~~~~~~~~~~~-~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .........+.. ....+..+.+.+++.+||+.||++||||.||+++|+.+.
T Consensus       245 ~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~  296 (303)
T 3hmm_A          245 VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             HTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            222222221221 223456788999999999999999999999999998764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=4.4e-40  Score=337.64  Aligned_cols=214  Identities=22%  Similarity=0.296  Sum_probs=164.5

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEe
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      .++..+.||+|+|  ||++....  ..||+|                              |+++++++++++..|+|||
T Consensus        14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE   93 (275)
T 3hyh_A           14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE   93 (275)
T ss_dssp             CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence            4566778999988  88887643  677777                              8999999999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      |+ +|+|.+++.+.+ ++++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+|+......  
T Consensus        94 y~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~--  166 (275)
T 3hyh_A           94 YA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--  166 (275)
T ss_dssp             CC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred             CC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCC--
Confidence            99 679999998765 799999999999999999999999   99999999999999999999999999998754322  


Q ss_pred             eeeceeccccccCcccccCCCC-CccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          570 IVAGVRGSRGYMAPEWQNSGLI-TVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                      ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||....   ...     ....+..+..      ..+
T Consensus       167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~---~~~-----~~~~i~~~~~------~~p  232 (275)
T 3hyh_A          167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES---IPV-----LFKNISNGVY------TLP  232 (275)
T ss_dssp             --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHH-----HHHHHHHTCC------CCC
T ss_pred             ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC---HHH-----HHHHHHcCCC------CCC
Confidence            2345789999999999988776 589999999999999999999996431   111     1111122211      122


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ...++.+.+++.+||+.||++|||++|+++
T Consensus       233 ~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          233 KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            334567889999999999999999999987

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2.8e-40  Score=351.99  Aligned_cols=228  Identities=24%  Similarity=0.292  Sum_probs=181.6

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-------hhhHhh-----------------------------eeeEEEEEec-CCe
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-------LCFLIA-----------------------------ISSLLVYKHR-SSK  483 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-------~~~avk-----------------------------i~~l~~~~~~-~~~  483 (702)
                      +.++..++||+|+|  ||+|....       ..||||                             |+++++++.+ ++.
T Consensus        64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~  143 (353)
T 4ase_A           64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP  143 (353)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred             HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCE
Confidence            34555678999998  88886543       346665                             8889987754 567


Q ss_pred             eEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          484 KLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      .+||||||++|+|.++|+...               ..+++.+++.++.||++||+|||++   +||||||||+|||+++
T Consensus       144 ~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl~~  220 (353)
T 4ase_A          144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSE  220 (353)
T ss_dssp             CEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECG
T ss_pred             EEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceeeCC
Confidence            999999999999999997532               2478999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhh
Q 038002          549 SWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLL  626 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~  626 (702)
                      ++.+||+|||+|+.+...... ......||+.|+|||++.+..++.++|||||||++|||+| |+.||.......  .  
T Consensus       221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~--~--  296 (353)
T 4ase_A          221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--E--  296 (353)
T ss_dssp             GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--H--
T ss_pred             CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH--H--
Confidence            999999999999977554433 3345789999999999999999999999999999999998 999997542211  1  


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                         .......+..     ...+...++++.+++.+||+.||++|||++||+++|+.+.+
T Consensus       297 ---~~~~i~~g~~-----~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          297 ---FCRRLKEGTR-----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             ---HHHHHHHTCC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---HHHHHHcCCC-----CCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence               1111112111     12233345678899999999999999999999999987643

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2.8e-40  Score=343.77  Aligned_cols=216  Identities=21%  Similarity=0.195  Sum_probs=174.4

Q ss_pred             cccccceEEEeEE--EEEeeee-----hhhhHhh-----------------------------eeeEEEEEecCCeeEEE
Q 038002          444 KVNDKRKLLTVLA--GCLGSIT-----FLCFLIA-----------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~-----~~~~avk-----------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      .++..+.||+|+|  ||++...     .+.||+|                             |+++++.+++++..|||
T Consensus        25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv  104 (304)
T 3ubd_A           25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI  104 (304)
T ss_dssp             GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred             ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            4566788999988  8887642     2467777                             88999999999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      ||||+||+|.++|.+.+ .+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+|+......
T Consensus       105 mEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  180 (304)
T 3ubd_A          105 LDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE  180 (304)
T ss_dssp             ECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred             EEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence            99999999999998765 799999999999999999999999   99999999999999999999999999998653322


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                       ......+||+.|+|||++.+..++.++|||||||++|||++|+.||....   ....     ...+.....      ..
T Consensus       181 -~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~---~~~~-----~~~i~~~~~------~~  245 (304)
T 3ubd_A          181 -KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD---RKET-----MTMILKAKL------GM  245 (304)
T ss_dssp             -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHH-----HHHHHHCCC------CC
T ss_pred             -ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC---HHHH-----HHHHHcCCC------CC
Confidence             22345789999999999999999999999999999999999999996431   1111     111111111      12


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSM-----KNVIL  678 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~-----~evl~  678 (702)
                      +...++++.+++.+||+.||++|||+     +|+++
T Consensus       246 p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          246 PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            23346678999999999999999984     67764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=3.6e-38  Score=328.91  Aligned_cols=217  Identities=19%  Similarity=0.207  Sum_probs=160.3

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCC---------
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSS---------  482 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~---------  482 (702)
                      .++..+.||+|+|  ||++....  ..||||                            |+++++.+.+.+         
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~   85 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS   85 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence            3455678999998  89887653  678887                            888887776543         


Q ss_pred             ---eeEEEEecCCCCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecc
Q 038002          483 ---KKLLVYEFMSKGSLADLLFNLET--RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDF  557 (702)
Q Consensus       483 ---~~~lV~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df  557 (702)
                         ..|+|||||++|+|.+++.....  ..++..++.++.||++||+|||++   +|+||||||+|||++.++.+||+||
T Consensus        86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DF  162 (299)
T 4g31_A           86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDF  162 (299)
T ss_dssp             -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC
T ss_pred             CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccC
Confidence               47999999999999999986542  245667889999999999999999   9999999999999999999999999


Q ss_pred             cceeecCCCCCc-----------eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          558 GLAKLLMPNQTG-----------IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       558 g~a~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                      |+|+.+......           .....+||+.|+|||++.+..|+.++|||||||++|||++   ||...   .+... 
T Consensus       163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~---~~~~~-  235 (299)
T 4g31_A          163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ---MERVR-  235 (299)
T ss_dssp             CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH---HHHHH-
T ss_pred             ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc---cHHHH-
Confidence            999876543221           1234579999999999999999999999999999999996   77421   11110 


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                         ..........+     .......+.+.+++.+||+.||++|||++|+++
T Consensus       236 ---~~~~~~~~~~p-----~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          236 ---TLTDVRNLKFP-----PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             ---HHHHHHTTCCC-----HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---HHHHHhcCCCC-----CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence               11111122211     112233456678999999999999999999987

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=3.6e-37  Score=329.97  Aligned_cols=169  Identities=20%  Similarity=0.255  Sum_probs=143.7

Q ss_pred             cccccccceEEEeEE--EEEeeee-----hhhhHhh--------------------------eeeEEEEEecCCeeEEEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSIT-----FLCFLIA--------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~-----~~~~avk--------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      .+.++..++||+|+|  ||++...     ...||+|                          |++++..++++++.|+||
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm   99 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM   99 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence            456777889999998  8988653     2567776                          888899999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC-CcEEEecccceeecCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS-WRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Dfg~a~~~~~~~  567 (702)
                      ||+++|+|.+++.    .+++.++..++.||+.||+|||++   ||+||||||+|||++.+ +.+||+|||+|+......
T Consensus       100 E~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~  172 (361)
T 4f9c_A          100 PYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK  172 (361)
T ss_dssp             ECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred             eCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence            9999999999993    589999999999999999999999   99999999999999877 799999999998654321


Q ss_pred             C---------------------------ceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCC
Q 038002          568 T---------------------------GIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVN  617 (702)
Q Consensus       568 ~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~  617 (702)
                      .                           ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~  250 (361)
T 4f9c_A          173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA  250 (361)
T ss_dssp             CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence            1                           112345799999999988765 5899999999999999999999999654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.1e-36  Score=343.93  Aligned_cols=218  Identities=20%  Similarity=0.168  Sum_probs=178.2

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------------eeeEEEEEecCCeeE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------------ISSLLVYKHRSSKKL  485 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------------i~~l~~~~~~~~~~~  485 (702)
                      +.+...+.||+|+|  ||++....  ..||+|                                 |++++..|++++.+|
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            45666789999999  88887654  667776                                 788999999999999


Q ss_pred             EEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCC
Q 038002          486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP  565 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~  565 (702)
                      |||||++||+|.++|.+.+ .+++.++..++.||+.||+|||++   |||||||||+|||++.+|++||+|||+|+.+..
T Consensus       269 lVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~  344 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK  344 (689)
T ss_dssp             EEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence            9999999999999998765 799999999999999999999999   999999999999999999999999999987654


Q ss_pred             CCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          566 NQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       566 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      ..   ....+||+.|+|||++.. ..|+.++|||||||++|||++|+.||......... .    .........      
T Consensus       345 ~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~-~----i~~~i~~~~------  410 (689)
T 3v5w_A          345 KK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-E----IDRMTLTMA------  410 (689)
T ss_dssp             CC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH-H----HHHHHHHCC------
T ss_pred             CC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-H----HHHhhcCCC------
Confidence            33   345689999999999864 57999999999999999999999999654222111 1    111111111      


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPS-----MKNVIL  678 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~  678 (702)
                      ...+...+.++.+||.+||+.||++|++     ++||++
T Consensus       411 ~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            1223345678899999999999999998     677765

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.9e-36  Score=326.42  Aligned_cols=228  Identities=19%  Similarity=0.192  Sum_probs=173.0

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEe------cCCe
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKH------RSSK  483 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~------~~~~  483 (702)
                      +.++..+.||+|+|  ||++....  ..||||                             |++++++++      +.++
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            45667789999998  99988654  778887                             778887754      4578


Q ss_pred             eEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          484 KLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                      .|||||||+ |+|.+++...+ .+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+|+.+
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~  208 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL  208 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred             EEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeec
Confidence            999999996 68999997655 799999999999999999999999   9999999999999999999999999999876


Q ss_pred             CCCC---CceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccc-
Q 038002          564 MPNQ---TGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGE-  638 (702)
Q Consensus       564 ~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-  638 (702)
                      ....   .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.......   .+.. +........ 
T Consensus       209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~---~l~~-I~~~~g~p~~  284 (398)
T 4b99_A          209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH---QLQL-IMMVLGTPSP  284 (398)
T ss_dssp             -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH---HHHH-HHHHHCCCCG
T ss_pred             ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH---HHHH-HHHhcCCCCh
Confidence            4322   2234467899999999988764 57999999999999999999999997542111   1111 111000000 


Q ss_pred             ----------cccc---ccc-------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          639 ----------FNKL---VEE-------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       639 ----------~~~~---~~~-------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                                ....   +..       ...+..++++.+|+.+||+.||++|||++|+++.
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                      0000   000       1112235678899999999999999999999873

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=100.00  E-value=4.1e-35  Score=295.08  Aligned_cols=212  Identities=19%  Similarity=0.244  Sum_probs=161.3

Q ss_pred             cccccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEc
Q 038002           26 LKSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKT  105 (702)
Q Consensus        26 ~~~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~  105 (702)
                      +.++|.+|++|.++  ++|  ++|.|+|||+.+++.   .+ |..   +++||+|||+.|   ..+.|+|+.||||||+|
T Consensus         7 ~~~~i~~g~~L~~g--~~l--~~g~f~l~f~~~gnl---~l-y~~---~~~vW~an~~~~---~~~~l~l~~dGnLvl~d   72 (236)
T 1dlp_A            7 LSHEGSHPQTLHAA--QSL--ELSSFRFTMQSDCNL---VL-FDS---DVRVWASNTAGA---TGCRAVLQSDGLLVILT   72 (236)
T ss_dssp             SSSSSCSCSCCCTT--CEE--CSTTEEEEECTTSCE---EE-EES---SSEEECCCCCSC---SCCBCCBCSSSCBCCBC
T ss_pred             ccceeCCCCEECCC--CEE--EcCCEEEEECCCCcE---EE-EEC---CEEEEECCCCCC---CCeEEEEcCCCcEEEEc
Confidence            34999999999987  677  599999999987764   23 432   799999999976   67899999999999999


Q ss_pred             CCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCccc----------ccCCCccCCC-CeEEeeccCCC
Q 038002          106 EESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDT----------ILGGQSLENG-EHLLSSVTETN  174 (702)
Q Consensus       106 ~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDT----------lLpgq~l~~~-~~L~S~~s~~d  174 (702)
                      .+|.++|+|++.......+|+|+|+|||||++.   ++||||||||||          |+|||+++.+ ++|+|   .+|
T Consensus        73 ~~~~~vW~s~~~~~~~~~~~~l~d~Gnlvl~~~---~~W~S~~~p~~t~~lp~~g~d~L~~gq~~~~~~~~L~s---~~d  146 (236)
T 1dlp_A           73 AQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYGP---GLWDSGTSNKGSVVVANNGNSILYSTQGNDNHPQTLHA---TQS  146 (236)
T ss_dssp             TTTCCSCCCCCCCCSSCCEEEECSSSCEEEECS---EEEECSCCCSSCCCCSSCCCEECCCC--CCCCCCEECS---SCC
T ss_pred             CCCcEEEeCCccccCCcEEEEEeCCCCEEEecC---CEEECCCCCCcccccCCccceEEecCCcCCCccceEEc---CcE
Confidence            999999999875334456899999999999954   899999999855          5888877653 57774   789


Q ss_pred             CcccceEeeeccCCceeeeeccccccccceeecCCccccCcCcceeeeeecCCccEEEeecCccceEEeeeeeeeeccCc
Q 038002          175 SSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNE  254 (702)
Q Consensus       175 ps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (702)
                      |++|.|+|.|+++|+++++.      +..+||+++++.. .+...  +.+..+|.+.++..++.....   ++  ...+.
T Consensus       147 ~s~G~~~l~l~~dG~LvL~~------~~~~~W~s~~~~~-~~~~~--~~L~~~Gnl~ly~~~~~~vw~---s~--~~~~~  212 (236)
T 1dlp_A          147 LQLSPYRLSMETDCNLVLFD------RDDRVWSTNTAGK-GTGCR--AVLQPNGRMDVLTNQNIAVWT---SG--NSRSA  212 (236)
T ss_dssp             CBCSSCEEEEETTTEEEEEB------TTBCCSCCCCCSS-CSSCE--EEEETTTEEEEEETTTEEEEE---CC--CCCSS
T ss_pred             eecCcEEEEECCCCcEEEEc------CCEeEEeCCCcCC-CCceE--EEECCCCcEEEEeCCCcEEEE---eC--CCCCC
Confidence            99999999999999887762      2257999999843 33323  566778876666544332211   22  22222


Q ss_pred             ceEEEEEEccCCcEEEEE
Q 038002          255 TVIYRTTLDSDGILRLYS  272 (702)
Q Consensus       255 ~~~~rl~Ld~dG~lr~y~  272 (702)
                       ..+|++||+||++++|.
T Consensus       213 -~~~rl~Ld~dG~l~ly~  229 (236)
T 1dlp_A          213 -GRYVFVLQPDRNLAIYG  229 (236)
T ss_dssp             -SCCEEEECSSSCEEEEC
T ss_pred             -CCEEEEEcCCCcEEEeC
Confidence             35789999999999994

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=5.2e-36  Score=340.06  Aligned_cols=221  Identities=21%  Similarity=0.241  Sum_probs=179.6

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      +.+...+.||+|+|  ||++....  ..||+|                           |+++++.+++++..|||||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            34556678999988  88887654  567766                           889999999999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC--CcEEEecccceeecCCCCCc
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS--WRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~--~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      +||+|.++|......+++.++..++.||+.||+|||++   +|+||||||+|||++.+  +.+||+|||+++.+....  
T Consensus       237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~--  311 (573)
T 3uto_A          237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ--  311 (573)
T ss_dssp             CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS--
T ss_pred             CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCCC--
Confidence            99999999987666799999999999999999999999   99999999999999754  899999999999875433  


Q ss_pred             eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCH
Q 038002          570 IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK  649 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (702)
                      .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||.....   ...     ...+......  +......
T Consensus       312 ~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~---~~~-----~~~i~~~~~~--~~~~~~~  381 (573)
T 3uto_A          312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND---DET-----LRNVKSCDWN--MDDSAFS  381 (573)
T ss_dssp             EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH---HHH-----HHHHHTTCCC--CCSGGGT
T ss_pred             ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH---HHH-----HHHHHhCCCC--CCccccc
Confidence            34556899999999999999999999999999999999999999964411   111     1111111111  1111222


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          650 ITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..++.+.+||.+||+.||++|||++|+++
T Consensus       382 ~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          382 GISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            34567889999999999999999999987

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1.4e-34  Score=306.61  Aligned_cols=243  Identities=35%  Similarity=0.584  Sum_probs=195.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-hhhHhh----------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-LCFLIA----------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      +.+...+.||+|++  ||++.... ..||+|                            |+++++++.+++..++||||+
T Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  109 (326)
T 3uim_A           30 DNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYM  109 (326)
T ss_dssp             TSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECC
T ss_pred             hccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEec
Confidence            44556678888887  88876543 556666                            788889999999999999999


Q ss_pred             CCCCHHHHhhcCCC---CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          492 SKGSLADLLFNLET---RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       492 ~~gsL~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ++|+|.+++.....   .+++..+..++.|++.||+|||+++..+|+||||||+||+++.++.+||+|||++........
T Consensus       110 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  189 (326)
T 3uim_A          110 ANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT  189 (326)
T ss_dssp             TTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSS
T ss_pred             cCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccc
Confidence            99999999987542   388999999999999999999998666999999999999999999999999999998765555


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCC-CCcchhhhHHHHHHhhhcccccccccc--
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNV-STADEVLLSTWVYNCFVAGEFNKLVEE--  645 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--  645 (702)
                      .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.... ..........+..............+.  
T Consensus       190 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (326)
T 3uim_A          190 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL  269 (326)
T ss_dssp             CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTC
T ss_pred             cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhh
Confidence            55556679999999999988889999999999999999999999996321 111122233333333333333333332  


Q ss_pred             --ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          646 --EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       646 --~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                        .......+.+.+++.+||+.||++|||++||+++|++...
T Consensus       270 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          270 QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             TTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred             ccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence              4567888999999999999999999999999999998543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=4.5e-35  Score=308.28  Aligned_cols=235  Identities=25%  Similarity=0.290  Sum_probs=175.2

Q ss_pred             cccccccceEEEeEE--EEEeeeehhhhHhh-----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITFLCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      ...++..+.||+|++  ||++......||+|                             |+++++++.+++..++||||
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  115 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY  115 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEEC
T ss_pred             hhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEec
Confidence            345566788999987  88887666667766                             78889999999999999999


Q ss_pred             CCCCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHhhhhcCCCC--eEecCCCCCcEEEeCCCcEEEecccceeecCCC
Q 038002          491 MSKGSLADLLFNLET--RPLWRDRVRIALDVARGLLYLHDECEVQ--IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  566 (702)
                      +++|+|.+++.....  .+++.+++.++.||+.||+|||++   +  |+||||||+||+++.++.+||+|||+++.....
T Consensus       116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~  192 (309)
T 3p86_A          116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST  192 (309)
T ss_dssp             CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred             CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence            999999999987542  289999999999999999999999   8  999999999999999999999999999864332


Q ss_pred             CCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          567 QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       567 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                      . .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.....    .........   ..     ....
T Consensus       193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~----~~~~~~~~~---~~-----~~~~  259 (309)
T 3p86_A          193 F-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP----AQVVAAVGF---KC-----KRLE  259 (309)
T ss_dssp             ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH----HHHHHHHHH---SC-----CCCC
T ss_pred             c-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHh---cC-----CCCC
Confidence            2 123346789999999999999999999999999999999999999964311    111110100   00     0112


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCCCCCCC
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFP  692 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~~p~~P  692 (702)
                      .+......+.+++.+||+.||++|||+++++++|+.+.+-..|+.+
T Consensus       260 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~~  305 (309)
T 3p86_A          260 IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN  305 (309)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-------
T ss_pred             CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCCC
Confidence            2334456789999999999999999999999999997765554433

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=2.3e-34  Score=304.37  Aligned_cols=241  Identities=31%  Similarity=0.543  Sum_probs=191.2

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-hhhHhh---------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      ..++..+.||+|++  ||++.... ..||+|                           |+++++++.+++..++||||++
T Consensus        39 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  118 (321)
T 2qkw_B           39 NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME  118 (321)
T ss_dssp             CCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCT
T ss_pred             hccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCC
Confidence            34455667788877  77776543 555655                           8889999999999999999999


Q ss_pred             CCCHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC-C
Q 038002          493 KGSLADLLFNLE---TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ-T  568 (702)
Q Consensus       493 ~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-~  568 (702)
                      +|+|.+++....   ..+++.+++.++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++....... .
T Consensus       119 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  195 (321)
T 2qkw_B          119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT  195 (321)
T ss_dssp             TCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC
T ss_pred             CCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence            999999997653   2488999999999999999999999   99999999999999999999999999998754322 2


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccc---
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE---  645 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  645 (702)
                      .......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... ......+.......+.+...+++   
T Consensus       196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (321)
T 2qkw_B          196 HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE-MVNLAEWAVESHNNGQLEQIVDPNLA  274 (321)
T ss_dssp             CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSS-CCCHHHHTHHHHTTTCCCSSSSSSCT
T ss_pred             ccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHH-HHHHHHHhhhccccccHHHhcChhhc
Confidence            22344568999999999988899999999999999999999999997653222 22222333333333333333332   


Q ss_pred             -ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCC
Q 038002          646 -EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP  687 (702)
Q Consensus       646 -~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~  687 (702)
                       .........+.+++.+||+.||++|||++|+++.|+.+.++.
T Consensus       275 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~  317 (321)
T 2qkw_B          275 DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ  317 (321)
T ss_dssp             TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence             456788999999999999999999999999999999876543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=4.1e-34  Score=299.08  Aligned_cols=235  Identities=23%  Similarity=0.225  Sum_probs=179.8

Q ss_pred             cccccccceEEEeEE--EEEeeeehhhhHhh--------------------------eeeEEEEE----ecCCeeEEEEe
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITFLCFLIA--------------------------ISSLLVYK----HRSSKKLLVYE  489 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~~~~avk--------------------------i~~l~~~~----~~~~~~~lV~e  489 (702)
                      .+.+...+.||+|++  ||++......||||                          |+++++++    +.....++|||
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e   86 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITH   86 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred             cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehh
Confidence            456667789999988  88888766777777                          66666553    33567899999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhh--------hcCCCCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLH--------DECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH--------~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      |+++|+|.+++...  .+++..+..++.||+.||+|||        ++   +|+||||||+|||++.++.+||+|||++.
T Consensus        87 ~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  161 (301)
T 3q4u_A           87 YHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGLAV  161 (301)
T ss_dssp             CCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             hccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence            99999999999543  6899999999999999999999        87   99999999999999999999999999998


Q ss_pred             ecCCCCCce---eeceeccccccCcccccCC------CCCccccccchhHhHHHhhhC----------CcCCcCCCCCcc
Q 038002          562 LLMPNQTGI---VAGVRGSRGYMAPEWQNSG------LITVKSDVYSFGVVLLEIICC----------RSNFEVNVSTAD  622 (702)
Q Consensus       562 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvil~elltG----------~~Pf~~~~~~~~  622 (702)
                      .........   .....||+.|+|||.+.+.      .++.++||||||+++|||++|          ..||........
T Consensus       162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~  241 (301)
T 3q4u_A          162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP  241 (301)
T ss_dssp             EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc
Confidence            765443322   2234799999999988776      455799999999999999999          788765422221


Q ss_pred             hhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          623 EVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      ...  ...........................+.+++.+||+.||++|||++||+++|+++
T Consensus       242 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          242 SFE--DMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             CHH--HHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             chh--hhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            111  11111111111111111123445788999999999999999999999999999864

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=6.1e-34  Score=297.37  Aligned_cols=236  Identities=22%  Similarity=0.253  Sum_probs=181.3

Q ss_pred             CcccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEE
Q 038002          441 GNDKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       441 ~~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~l  486 (702)
                      ..++++..+.||+|++  ||++....  ..+|+|                              |+++++++++++..++
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l   88 (294)
T 4eqm_A            9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL   88 (294)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred             hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence            3556777788999987  88876543  456655                              7888999999999999


Q ss_pred             EEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCC
Q 038002          487 VYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  566 (702)
                      ||||+++++|.+++.... .+++.++..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++......
T Consensus        89 v~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  164 (294)
T 4eqm_A           89 VMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET  164 (294)
T ss_dssp             EEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred             EEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence            999999999999997654 689999999999999999999999   9999999999999999999999999999876444


Q ss_pred             CCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          567 QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       567 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                      .........||+.|+|||.+.+..++.++||||||+++|||++|+.||.....  ...     .... ....... ....
T Consensus       165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--~~~-----~~~~-~~~~~~~-~~~~  235 (294)
T 4eqm_A          165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA--VSI-----AIKH-IQDSVPN-VTTD  235 (294)
T ss_dssp             ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH--HHH-----HHHH-HSSCCCC-HHHH
T ss_pred             cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--HHH-----HHHH-hhccCCC-cchh
Confidence            33334456799999999999999999999999999999999999999965411  000     1111 1111111 1112


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhCCcCCCCC
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRP-SMKNVILMLEGTMEIPIL  689 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RP-t~~evl~~Le~~~~~~~p  689 (702)
                      .....++.+.+++.+||+.||++|| +++++.+.|+.+..-...
T Consensus       236 ~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~  279 (294)
T 4eqm_A          236 VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA  279 (294)
T ss_dssp             SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred             cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence            2334567889999999999999998 999999999987654433

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=3.2e-34  Score=301.66  Aligned_cols=229  Identities=23%  Similarity=0.320  Sum_probs=180.1

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      +.+...+.||+|++  ||++....  ..+|+|                           |+++++++.+++..++||||+
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            34455677888877  77776543  455555                           888999999999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce-
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI-  570 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-  570 (702)
                      ++++|.+++......+++.++..++.||++||+|||++   +|+||||||+||+++.++.+||+|||++.......... 
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  166 (310)
T 3s95_A           90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE  166 (310)
T ss_dssp             TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred             CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence            99999999998766899999999999999999999999   99999999999999999999999999998764332211 


Q ss_pred             ------------eeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccc
Q 038002          571 ------------VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGE  638 (702)
Q Consensus       571 ------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  638 (702)
                                  .....||+.|+|||.+.+..++.++||||||+++|||++|..|+.............           
T Consensus       167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~-----------  235 (310)
T 3s95_A          167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN-----------  235 (310)
T ss_dssp             -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC-----------
T ss_pred             ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh-----------
Confidence                        114579999999999999999999999999999999999999987543222111100           


Q ss_pred             cccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          639 FNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       639 ~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      .........+...+..+.+++.+||+.||++|||++++++.|+.+..
T Consensus       236 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~  282 (310)
T 3s95_A          236 VRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM  282 (310)
T ss_dssp             HHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            00001111122334578899999999999999999999999998643

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=2.6e-33  Score=292.57  Aligned_cols=232  Identities=15%  Similarity=0.104  Sum_probs=181.8

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      ..++..+.||+|++  ||++....  ..||+|                          +++++.++.++...++||||+ 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-   88 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-   88 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-
Confidence            44556677888876  77776432  566666                          777888899999999999999 


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCc-----EEEecccceeecCCCC
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWR-----AKISDFGLAKLLMPNQ  567 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~-----~kl~Dfg~a~~~~~~~  567 (702)
                      +++|.+++......+++.++..++.||+.||+|||++   +|+||||||+||+++.++.     +||+|||++.......
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~  165 (298)
T 1csn_A           89 GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV  165 (298)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred             CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence            9999999988766799999999999999999999999   9999999999999987776     9999999998775433


Q ss_pred             Cc------eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccc
Q 038002          568 TG------IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNK  641 (702)
Q Consensus       568 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  641 (702)
                      ..      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||............... .........  
T Consensus       166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~--  242 (298)
T 1csn_A          166 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI-GEKKQSTPL--  242 (298)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHH-HHHHHHSCH--
T ss_pred             ccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHH-HhhccCccH--
Confidence            21      234567999999999999989999999999999999999999999765322222111111 111111111  


Q ss_pred             ccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          642 LVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       642 ~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                         .......++.+.+++.+||+.||++||++++|++.|+++.
T Consensus       243 ---~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~  282 (298)
T 1csn_A          243 ---RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL  282 (298)
T ss_dssp             ---HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             ---HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence               1112234568899999999999999999999999999864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=3.3e-33  Score=292.29  Aligned_cols=221  Identities=21%  Similarity=0.218  Sum_probs=177.8

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEec
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      ..++...++||+|++  ||++....  ..||+|                           |+++++++..++..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            456677789999987  88886533  566666                           88899999999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      +++++|.+++...  .+++.++..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++........ .
T Consensus        99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~  172 (297)
T 3fxz_A           99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K  172 (297)
T ss_dssp             CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred             CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence            9999999999764  589999999999999999999999   999999999999999999999999999987644332 2


Q ss_pred             eeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHH
Q 038002          571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI  650 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  650 (702)
                      .....||+.|+|||.+.+..++.++||||||+++|||++|+.||.....   .....    ...... ....   ..+..
T Consensus       173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~----~~~~~~-~~~~---~~~~~  241 (297)
T 3fxz_A          173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP---LRALY----LIATNG-TPEL---QNPEK  241 (297)
T ss_dssp             BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHH----HHHHHC-SCCC---SCGGG
T ss_pred             cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHH----HHHhCC-CCCC---CCccc
Confidence            3446799999999999999999999999999999999999999964311   11110    000111 0000   11233


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          651 TLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       651 ~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .+..+.+++.+||+.||++|||++|+++.
T Consensus       242 ~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          242 LSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            45678899999999999999999999873

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=7.2e-34  Score=292.25  Aligned_cols=227  Identities=20%  Similarity=0.305  Sum_probs=183.2

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      +.++..+.||+|++  ||++.... ..||+|                          |+++++++.+++..++||||+++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   87 (268)
T 3sxs_A            8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISN   87 (268)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred             hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCC
Confidence            45566678888887  88776554 456666                          88899999999999999999999


Q ss_pred             CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeec
Q 038002          494 GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG  573 (702)
Q Consensus       494 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  573 (702)
                      ++|.+++......+++.++..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++.............
T Consensus        88 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~  164 (268)
T 3sxs_A           88 GCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG  164 (268)
T ss_dssp             CBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred             CcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence            999999987665699999999999999999999999   99999999999999999999999999998775544433344


Q ss_pred             eeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHH
Q 038002          574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL  652 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  652 (702)
                      ..+++.|+|||.+.+..++.++||||||+++|||++ |+.||......  . .     ......+.     ....+...+
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~-~-----~~~~~~~~-----~~~~~~~~~  231 (268)
T 3sxs_A          165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--E-V-----VLKVSQGH-----RLYRPHLAS  231 (268)
T ss_dssp             CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--H-H-----HHHHHTTC-----CCCCCTTSC
T ss_pred             CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--H-H-----HHHHHcCC-----CCCCCCcCh
Confidence            556778999999988889999999999999999999 99999644111  1 1     01111111     011122234


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          653 ERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       653 ~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      +.+.+++.+||+.||++|||++|+++.|+.+.+
T Consensus       232 ~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          232 DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            578899999999999999999999999998764

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=4.5e-33  Score=290.26  Aligned_cols=233  Identities=17%  Similarity=0.133  Sum_probs=180.1

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      .+.++..+.||+|++  ||++....  ..||+|                          |..+..++..++..++||||+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence            345666788898887  88887433  567776                          444556667899999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE---eCCCcEEEecccceeecCCCCC
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                       +++|.+++......+++.++..++.||+.||+|||++   +|+||||||+||++   +.++.+||+|||++........
T Consensus        88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~  163 (296)
T 4hgt_A           88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             -CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             -CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence             9999999987666799999999999999999999999   99999999999999   7899999999999987654332


Q ss_pred             ------ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccc
Q 038002          569 ------GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKL  642 (702)
Q Consensus       569 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  642 (702)
                            .......||+.|+|||.+.+..++.++||||||+++|||++|+.||..................... ...   
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~---  239 (296)
T 4hgt_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS-TPI---  239 (296)
T ss_dssp             CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-SCH---
T ss_pred             CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccccc-chh---
Confidence                  1223467899999999999999999999999999999999999999765332222221111111110 000   


Q ss_pred             cccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          643 VEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       643 ~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                        .......++.+.+++.+||+.||++|||+++|+++|+++.
T Consensus       240 --~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~  279 (296)
T 4hgt_A          240 --EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             --HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             --hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence              0111223568899999999999999999999999998754

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=4.4e-33  Score=306.15  Aligned_cols=225  Identities=18%  Similarity=0.167  Sum_probs=179.0

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +.++..++||+|++  ||++....  ..+|+|                              |++++..+++++..||||
T Consensus        74 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~  153 (437)
T 4aw2_A           74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVM  153 (437)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEE
Confidence            44566788999988  88887654  556666                              788889999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+++|+|.+++......+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.......
T Consensus       154 Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~  230 (437)
T 4aw2_A          154 DYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT  230 (437)
T ss_dssp             CCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred             ecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence            99999999999988666899999999999999999999999   999999999999999999999999999987755544


Q ss_pred             ceeeceeccccccCccccc-----CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccc
Q 038002          569 GIVAGVRGSRGYMAPEWQN-----SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV  643 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  643 (702)
                      .......||+.|+|||++.     ...++.++|||||||++|||++|+.||.....   ...... +........++   
T Consensus       231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~---~~~~~~-i~~~~~~~~~p---  303 (437)
T 4aw2_A          231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL---VETYGK-IMNHKERFQFP---  303 (437)
T ss_dssp             EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHH-HHTHHHHCCCC---
T ss_pred             cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh---hHHHHh-hhhccccccCC---
Confidence            4445578999999999886     56789999999999999999999999975411   111111 11000000111   


Q ss_pred             ccccCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 038002          644 EEEVDKITLERMVKTGLLCIQDEPNL--RPSMKNVILM  679 (702)
Q Consensus       644 ~~~~~~~~~~~l~~li~~cL~~dP~~--RPt~~evl~~  679 (702)
                        ......++.+.++|.+||+.+|++  ||+++|+++.
T Consensus       304 --~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          304 --TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             --SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             --cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence              111224567889999999998888  9999999874

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=8.6e-34  Score=300.65  Aligned_cols=229  Identities=23%  Similarity=0.329  Sum_probs=180.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-----hhhHhh----------------------------eeeEEEEEecCCeeEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-----LCFLIA----------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-----~~~avk----------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      ..++..+.||+|++  ||++....     ..||||                            |+++++++.+++..++|
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            44555678899887  88877642     336666                            88899999999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |||+++++|.+++......+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++.......
T Consensus       129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  205 (325)
T 3kul_A          129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP  205 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred             eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence            999999999999987766899999999999999999999999   99999999999999999999999999999775433


Q ss_pred             Cc--eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          568 TG--IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       568 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      ..  ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.....    ...    ......+     ..
T Consensus       206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~----~~~----~~~~~~~-----~~  272 (325)
T 3kul_A          206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN----RDV----ISSVEEG-----YR  272 (325)
T ss_dssp             -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH----HHH----HHHHHTT-----CC
T ss_pred             cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH----HHH----HHHHHcC-----CC
Confidence            22  2223446778999999988899999999999999999999 9999964311    111    1111111     11


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCC
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP  687 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~  687 (702)
                      ...+...+..+.+++.+||+.||++|||+++|+++|+.+...+
T Consensus       273 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~  315 (325)
T 3kul_A          273 LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP  315 (325)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred             CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence            1223344568899999999999999999999999999876443

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.3e-33  Score=298.80  Aligned_cols=241  Identities=23%  Similarity=0.250  Sum_probs=181.9

Q ss_pred             ccccccceEEEeEE--EEEeeeehhhhHhh--------------------------eeeEEEEEecCC----eeEEEEec
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITFLCFLIA--------------------------ISSLLVYKHRSS----KKLLVYEF  490 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~~~~avk--------------------------i~~l~~~~~~~~----~~~lV~e~  490 (702)
                      ..++..+.||+|++  ||++......||||                          |+++++++..+.    ..++||||
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~  103 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAF  103 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             hhchhhheecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEec
Confidence            34556678999988  88887777777777                          788887777643    47999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcC-------CCCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC-------EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-------~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                      +++|+|.+++...  .+++.++..++.||+.||+|||+.+       ..+|+||||||+|||++.++.+||+|||+++..
T Consensus       104 ~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~  181 (322)
T 3soc_A          104 HEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF  181 (322)
T ss_dssp             CTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEE
T ss_pred             CCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccccc
Confidence            9999999999764  4899999999999999999999851       228999999999999999999999999999876


Q ss_pred             CCCCCc-eeeceeccccccCcccccC-----CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh--------HHH
Q 038002          564 MPNQTG-IVAGVRGSRGYMAPEWQNS-----GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL--------STW  629 (702)
Q Consensus       564 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~--------~~~  629 (702)
                      ...... ......||+.|+|||++.+     ..++.++||||||+++|||++|+.||............        ...
T Consensus       182 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~  261 (322)
T 3soc_A          182 EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLED  261 (322)
T ss_dssp             CTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHH
T ss_pred             ccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhh
Confidence            544322 2334678999999998876     35567899999999999999999999764322111000        000


Q ss_pred             HHHhhhcccccccccc-ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          630 VYNCFVAGEFNKLVEE-EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      .............+.. .........+.+++.+||+.||++|||++||+++|+.+.+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          262 MQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             HHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            1111111111111111 1233566789999999999999999999999999987643

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=5.1e-34  Score=293.67  Aligned_cols=226  Identities=22%  Similarity=0.311  Sum_probs=181.0

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      +.++..+.||+|++  ||++.... ..||+|                          |+++++++.+++..++||||+++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   89 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH   89 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence            34555678888887  88776643 456665                          88899999999999999999999


Q ss_pred             CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeec
Q 038002          494 GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG  573 (702)
Q Consensus       494 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  573 (702)
                      ++|.+++......+++.++..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++.............
T Consensus        90 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  166 (269)
T 4hcu_A           90 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG  166 (269)
T ss_dssp             CBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred             CcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence            999999987776799999999999999999999999   99999999999999999999999999998664333222334


Q ss_pred             eeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHH
Q 038002          574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL  652 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  652 (702)
                      ..+++.|+|||.+.+..++.++||||||+++|+|++ |+.||.....   . ..    ......+     .....+...+
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~---~-~~----~~~~~~~-----~~~~~~~~~~  233 (269)
T 4hcu_A          167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN---S-EV----VEDISTG-----FRLYKPRLAS  233 (269)
T ss_dssp             TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---H-HH----HHHHHTT-----CCCCCCTTSC
T ss_pred             cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH---H-HH----HHHHhcC-----ccCCCCCcCC
Confidence            456788999999988899999999999999999999 9999964311   1 11    1111111     0111222335


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          653 ERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       653 ~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ..+.+++.+||+.||++||+++|++++|+++.
T Consensus       234 ~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~  265 (269)
T 4hcu_A          234 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  265 (269)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence            67889999999999999999999999998764

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=8.4e-33  Score=288.36  Aligned_cols=232  Identities=17%  Similarity=0.132  Sum_probs=180.4

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      +.++..+.||+|++  ||++....  ..||+|                          +..+..+...++..++||||+ 
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-   87 (296)
T 3uzp_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-   87 (296)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred             cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-
Confidence            45566778888876  88887432  667776                          344456667889999999999 


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE---eCCCcEEEecccceeecCCCCCc
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      +++|.+++......+++.++..++.||+.||+|||++   +|+||||||+||++   +.++.+||+|||++.........
T Consensus        88 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~  164 (296)
T 3uzp_A           88 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  164 (296)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence            9999999986666799999999999999999999999   99999999999999   58889999999999876544321


Q ss_pred             ------eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccc
Q 038002          570 ------IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV  643 (702)
Q Consensus       570 ------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  643 (702)
                            ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..................... ...    
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~----  239 (296)
T 3uzp_A          165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS-TPI----  239 (296)
T ss_dssp             CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-SCH----
T ss_pred             cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC-Cch----
Confidence                  123467999999999999989999999999999999999999999764322222221111111110 000    


Q ss_pred             ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          644 EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       644 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                       +......++.+.+++.+||+.||++|||+++|++.|+.+.
T Consensus       240 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  279 (296)
T 3uzp_A          240 -EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             -HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             -HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence             0112234567899999999999999999999999999864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=4e-33  Score=302.49  Aligned_cols=220  Identities=18%  Similarity=0.257  Sum_probs=172.6

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------------eeeEEEEEecCCeeEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      +.++..+.||+|++  ||++....  ..+|+|                               |++++.++++++..|+|
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV  131 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV  131 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence            34556678888887  77776543  445555                               78889999999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |||+++|+|.+++.... .+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++..... 
T Consensus       132 ~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~-  206 (396)
T 4dc2_A          132 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-  206 (396)
T ss_dssp             EECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-
T ss_pred             EEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC-
Confidence            99999999999998754 799999999999999999999999   9999999999999999999999999999853222 


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcch-hhhHHHHHHhhhccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE-VLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                      .......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..........+.....      .
T Consensus       207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~  280 (396)
T 4dc2_A          207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------R  280 (396)
T ss_dssp             TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------C
T ss_pred             CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------C
Confidence            22344578999999999999999999999999999999999999999654221111 1111112222222211      2


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCH
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSM  673 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~  673 (702)
                      .+...+..+.+++.+||+.||++||++
T Consensus       281 ~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          281 IPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            233456678999999999999999996

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.9e-33  Score=301.09  Aligned_cols=217  Identities=23%  Similarity=0.304  Sum_probs=171.4

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------------eeeEEEEEecCCeeEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      +.++..+.||+|++  ||++....  ..||+|                               |++++.++++++..|+|
T Consensus        23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv  102 (353)
T 3txo_A           23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV  102 (353)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence            44566788999988  88876543  456665                               88889999999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++......
T Consensus       103 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~  178 (353)
T 3txo_A          103 MEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG  178 (353)
T ss_dssp             EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred             EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence            99999999999997754 799999999999999999999999   99999999999999999999999999998543222


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                       ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..     ....+.....      ..
T Consensus       179 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~---~~-----~~~~i~~~~~------~~  243 (353)
T 3txo_A          179 -VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE---DD-----LFEAILNDEV------VY  243 (353)
T ss_dssp             --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH---HH-----HHHHHHHCCC------CC
T ss_pred             -ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH---HH-----HHHHHHcCCC------CC
Confidence             233456799999999999888899999999999999999999999965411   11     1111111111      12


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSM------KNVIL  678 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~------~evl~  678 (702)
                      +......+.+++.+||+.||++||++      +|+++
T Consensus       244 p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          244 PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            22345678899999999999999998      67765

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=4.3e-33  Score=295.48  Aligned_cols=217  Identities=18%  Similarity=0.222  Sum_probs=175.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEe
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      ..++..+.||+|++  |+++....  ..||+|                             |+++++++.+++..|+|||
T Consensus        15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e   94 (328)
T 3fe3_A           15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME   94 (328)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEE
Confidence            34566778899987  88777533  566666                             8889999999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      |+++++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++.......  
T Consensus        95 ~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--  168 (328)
T 3fe3_A           95 YASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG--  168 (328)
T ss_dssp             CCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC--
T ss_pred             CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC--
Confidence            999999999997654 799999999999999999999999   99999999999999999999999999998664332  


Q ss_pred             eeeceeccccccCcccccCCCCC-ccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          570 IVAGVRGSRGYMAPEWQNSGLIT-VKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                      ......||+.|+|||++.+..+. .++|||||||++|||++|+.||.....    ..    .......+..      ..+
T Consensus       169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~----~~~~i~~~~~------~~p  234 (328)
T 3fe3_A          169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL----KE----LRERVLRGKY------RIP  234 (328)
T ss_dssp             GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH----HH----HHHHHHHCCC------CCC
T ss_pred             ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH----HH----HHHHHHhCCC------CCC
Confidence            23456799999999999877764 899999999999999999999965411    11    1111111111      122


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ...+..+.+++.+||+.||.+|||++|+++.
T Consensus       235 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          235 FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            2345678899999999999999999999874

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.1e-33  Score=295.81  Aligned_cols=222  Identities=19%  Similarity=0.209  Sum_probs=176.8

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      +.+...+.||+|++  ||++....  ..+|+|                          |+++++.+++.+..++||||++
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~   84 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS   84 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence            45566678888887  78776543  445544                          8899999999999999999999


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC--CCcEEEecccceeecCCCCCce
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD--SWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      +++|.+++......+++.++..++.||+.||+|||++   +|+||||||+||+++.  ++.+||+|||++.......  .
T Consensus        85 g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~--~  159 (321)
T 1tki_A           85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD--N  159 (321)
T ss_dssp             CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC--E
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC--c
Confidence            9999999987666799999999999999999999999   9999999999999987  7899999999998764433  3


Q ss_pred             eeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHH
Q 038002          571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI  650 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  650 (702)
                      .....||+.|+|||++.+..++.++||||||+++|+|++|..||....   .....     ..+......  ........
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~~-----~~i~~~~~~--~~~~~~~~  229 (321)
T 1tki_A          160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET---NQQII-----ENIMNAEYT--FDEEAFKE  229 (321)
T ss_dssp             EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS---HHHHH-----HHHHHTCCC--CCHHHHTT
T ss_pred             cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC---HHHHH-----HHHHcCCCC--CChhhhcc
Confidence            445679999999999998889999999999999999999999996531   11111     111111110  01111123


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          651 TLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       651 ~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .+..+.+++.+||+.||++|||++|+++.
T Consensus       230 ~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          230 ISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            35678999999999999999999999983

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.9e-33  Score=302.84  Aligned_cols=206  Identities=15%  Similarity=0.170  Sum_probs=158.5

Q ss_pred             eeeEEEEEecC----CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE
Q 038002          471 ISSLLVYKHRS----SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI  546 (702)
Q Consensus       471 i~~l~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  546 (702)
                      |+++++++...    ...+|||||+ +++|.+++......+++.+++.++.||+.||+|||++   +|+||||||+|||+
T Consensus       110 iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill  185 (364)
T 3op5_A          110 VPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLL  185 (364)
T ss_dssp             SCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred             CCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEE
Confidence            55566655543    5689999999 9999999988766899999999999999999999999   99999999999999


Q ss_pred             e--CCCcEEEecccceeecCCCCCc------eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCC
Q 038002          547 D--DSWRAKISDFGLAKLLMPNQTG------IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNV  618 (702)
Q Consensus       547 ~--~~~~~kl~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~  618 (702)
                      +  .++.+||+|||+++.+......      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus       186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~  265 (364)
T 3op5_A          186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL  265 (364)
T ss_dssp             ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence            9  8899999999999876432211      1133559999999999999899999999999999999999999997542


Q ss_pred             CCcchhhhHHHHHHhhhcccccccccccc-CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          619 STADEVLLSTWVYNCFVAGEFNKLVEEEV-DKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ..........   .. ....+...++... ....+..+.+++.+||+.||++||++++|+++|+.+.
T Consensus       266 ~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~  328 (364)
T 3op5_A          266 KDPKYVRDSK---IR-YRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL  328 (364)
T ss_dssp             TCHHHHHHHH---HH-HHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             cCHHHHHHHH---HH-hhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence            2221111111   11 1111222221110 1223567889999999999999999999999998643

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=1.1e-32  Score=292.72  Aligned_cols=229  Identities=16%  Similarity=0.121  Sum_probs=176.1

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      .++..+.||+|++  ||++....  ..||+|                          |++++.++..++..++||||+ +
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~   88 (330)
T 2izr_A           10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-G   88 (330)
T ss_dssp             TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-C
T ss_pred             CeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-C
Confidence            3455566777776  77666432  455555                          778889999999999999999 9


Q ss_pred             CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCc-----EEEecccceeecCCCCC
Q 038002          494 GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWR-----AKISDFGLAKLLMPNQT  568 (702)
Q Consensus       494 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~-----~kl~Dfg~a~~~~~~~~  568 (702)
                      ++|.+++......+++.+++.++.||+.||+|||++   +|+||||||+|||++.++.     +||+|||+++.+.....
T Consensus        89 ~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~  165 (330)
T 2izr_A           89 PSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET  165 (330)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTT
T ss_pred             CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCC
Confidence            999999987666899999999999999999999999   9999999999999998887     99999999997644332


Q ss_pred             c------eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccc
Q 038002          569 G------IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKL  642 (702)
Q Consensus       569 ~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  642 (702)
                      .      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..................     .....
T Consensus       166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~-----~~~~~  240 (330)
T 2izr_A          166 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT-----KRATP  240 (330)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHH-----HHHSC
T ss_pred             CccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhh-----hccCC
Confidence            1      124567999999999999999999999999999999999999999765322211111111100     00000


Q ss_pred             cccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          643 VEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       643 ~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      . .......+ .+.+++.+||+.||.+||++++|++.|+.+
T Consensus       241 ~-~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~  279 (330)
T 2izr_A          241 I-EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL  279 (330)
T ss_dssp             H-HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             H-HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence            0 00111123 899999999999999999999999999753

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=9.5e-33  Score=293.81  Aligned_cols=217  Identities=20%  Similarity=0.239  Sum_probs=174.0

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEe
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      .++..+.||+|++  ||++....  ..+|+|                              |++++..+++.+..|+|||
T Consensus         6 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E   85 (337)
T 1o6l_A            6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME   85 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             HeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEe
Confidence            4455678888877  77766542  455555                              7888899999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      |+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++...... .
T Consensus        86 ~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-~  160 (337)
T 1o6l_A           86 YANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-A  160 (337)
T ss_dssp             CCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-C
T ss_pred             CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC-C
Confidence            999999999997654 789999999999999999999999   99999999999999999999999999998643222 2


Q ss_pred             eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCH
Q 038002          570 IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK  649 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (702)
                      ......||+.|+|||++.+..++.++||||||+++|||++|+.||....   ...     ....+.....      ..+.
T Consensus       161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~---~~~-----~~~~i~~~~~------~~p~  226 (337)
T 1o6l_A          161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HER-----LFELILMEEI------RFPR  226 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS---HHH-----HHHHHHHCCC------CCCT
T ss_pred             cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC---HHH-----HHHHHHcCCC------CCCC
Confidence            2345679999999999999999999999999999999999999996431   111     1111111111      1223


Q ss_pred             HHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 038002          650 ITLERMVKTGLLCIQDEPNLRP-----SMKNVILM  679 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~  679 (702)
                      ..+..+.+++.+||+.||++||     +++|+++.
T Consensus       227 ~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          227 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence            3456789999999999999999     89998763

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.2e-32  Score=288.93  Aligned_cols=239  Identities=18%  Similarity=0.159  Sum_probs=183.2

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCC--eeEEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSS--KKLLV  487 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~--~~~lV  487 (702)
                      ...+...+.||+|++  ||++....  ..||+|                            |+++++++...+  ..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            456667788999987  88887653  566666                            677777776654  88999


Q ss_pred             EecCCCCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE----eCCCcEEEeccccee
Q 038002          488 YEFMSKGSLADLLFNLET--RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI----DDSWRAKISDFGLAK  561 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll----~~~~~~kl~Dfg~a~  561 (702)
                      |||+++++|.+++.....  .+++.+++.++.||+.||+|||++   +|+||||||+||++    +.++.+||+|||++.
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~  164 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence            999999999999987543  389999999999999999999999   99999999999999    777889999999998


Q ss_pred             ecCCCCCceeeceeccccccCccccc--------CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHh
Q 038002          562 LLMPNQTGIVAGVRGSRGYMAPEWQN--------SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNC  633 (702)
Q Consensus       562 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~  633 (702)
                      .......  .....||+.|+|||++.        +..++.++||||||+++|||++|+.||...................
T Consensus       165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  242 (319)
T 4euu_A          165 ELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG  242 (319)
T ss_dssp             ECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred             ecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence            7654332  33456899999999875        5788999999999999999999999997543322211111111111


Q ss_pred             hhccccc---------------cccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          634 FVAGEFN---------------KLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       634 ~~~~~~~---------------~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      .....+.               ..............+.+++.+||+.||++|||++|+++.......
T Consensus       243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~  309 (319)
T 4euu_A          243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (319)
T ss_dssp             CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred             CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence            1100000               001114457788899999999999999999999999999876543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=2.9e-33  Score=302.06  Aligned_cols=199  Identities=27%  Similarity=0.373  Sum_probs=162.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                      |+++++++.+++..|+||||+++|+|.+++....               ..+++.+++.++.||+.||+|||++   +|+
T Consensus       149 Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~iv  225 (370)
T 2psq_A          149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCI  225 (370)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred             EeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence            7889999999999999999999999999998653               2478999999999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcC
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSN  613 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~P  613 (702)
                      ||||||+|||++.++.+||+|||+++........ ......+++.|+|||++.+..++.++||||||+++|||++ |+.|
T Consensus       226 HrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p  305 (370)
T 2psq_A          226 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP  305 (370)
T ss_dssp             CSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             ccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence            9999999999999999999999999876443321 2233456789999999999999999999999999999999 9999


Q ss_pred             CcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          614 FEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       614 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      |.....  .+  .    ......+.     ....+......+.+++.+||+.||++||+++|+++.|+.+..
T Consensus       306 ~~~~~~--~~--~----~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          306 YPGIPV--EE--L----FKLLKEGH-----RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             STTCCG--GG--H----HHHHHTTC-----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCH--HH--H----HHHHhcCC-----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            965411  11  1    11111111     112233445678999999999999999999999999998643

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.98  E-value=2.4e-33  Score=303.00  Aligned_cols=226  Identities=23%  Similarity=0.312  Sum_probs=169.7

Q ss_pred             ccccccceEEEeEE--EEEeeee-----hhhhHhh----------------------------eeeEEEEEecCCeeEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSIT-----FLCFLIA----------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~-----~~~~avk----------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      ..+...+.||+|++  ||++...     ...||+|                            |+++++++.+++..++|
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            44556788999988  8888754     2456666                            88899999999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |||+++|+|.+++......+++.+++.++.||++||+|||++   +|+||||||+|||++.++.+||+|||+++......
T Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  201 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP  201 (373)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence            999999999999988776799999999999999999999999   99999999999999999999999999998765433


Q ss_pred             Cce--eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          568 TGI--VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       568 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      ...  .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....    .....    .....+.     .
T Consensus       202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~----~~~~~----~~i~~~~-----~  268 (373)
T 2qol_A          202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS----NQDVI----KAVDEGY-----R  268 (373)
T ss_dssp             ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC----HHHHH----HHHHTTE-----E
T ss_pred             ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC----HHHHH----HHHHcCC-----C
Confidence            211  122335778999999998899999999999999999998 999996431    11111    1111111     1


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ...+...+..+.+++.+||+.||++||++++|+++|+.+.
T Consensus       269 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~  308 (373)
T 2qol_A          269 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI  308 (373)
T ss_dssp             CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence            1122334567899999999999999999999999998753

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.98  E-value=1.6e-33  Score=292.10  Aligned_cols=226  Identities=21%  Similarity=0.304  Sum_probs=177.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      +.++..+.||+|++  ||++.... ..||+|                          |++++.++.+++..++||||+++
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  103 (283)
T 3gen_A           24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN  103 (283)
T ss_dssp             GGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTT
T ss_pred             HHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCC
Confidence            45556678888887  77776554 456665                          88899999999999999999999


Q ss_pred             CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeec
Q 038002          494 GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG  573 (702)
Q Consensus       494 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  573 (702)
                      ++|.+++......+++.++..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++.............
T Consensus       104 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~  180 (283)
T 3gen_A          104 GCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG  180 (283)
T ss_dssp             CBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred             CcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence            999999987666799999999999999999999999   99999999999999999999999999998664332222233


Q ss_pred             eeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHH
Q 038002          574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL  652 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  652 (702)
                      ..+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....    ....    .....+ .    ....+....
T Consensus       181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~----~~~~----~~~~~~-~----~~~~~~~~~  247 (283)
T 3gen_A          181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN----SETA----EHIAQG-L----RLYRPHLAS  247 (283)
T ss_dssp             TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH----HHHH----HHHHTT-C----CCCCCTTCC
T ss_pred             CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh----hHHH----HHHhcc-c----CCCCCCcCC
Confidence            456788999999988889999999999999999998 9999964411    1111    111111 0    111122234


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          653 ERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       653 ~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      +.+.+++.+||+.||++|||++|+++.|+.+.
T Consensus       248 ~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~  279 (283)
T 3gen_A          248 EKVYTIMYSCWHEKADERPTFKILLSNILDVM  279 (283)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence            67889999999999999999999999998753

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.98  E-value=7.1e-33  Score=297.53  Aligned_cols=221  Identities=22%  Similarity=0.244  Sum_probs=173.2

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------------eeeEEEEEecCCee
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------------ISSLLVYKHRSSKK  484 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------------i~~l~~~~~~~~~~  484 (702)
                      .+.+...+.||+|++  ||++....  ..+|+|                                 |+++++++++++..
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            344556677888876  77665442  344444                                 78888999999999


Q ss_pred             EEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC----cEEEecccce
Q 038002          485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW----RAKISDFGLA  560 (702)
Q Consensus       485 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~----~~kl~Dfg~a  560 (702)
                      ++||||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++    .+||+|||++
T Consensus        91 ~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a  166 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred             EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence            99999999999999997654 799999999999999999999999   999999999999998777    7999999999


Q ss_pred             eecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccc
Q 038002          561 KLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFN  640 (702)
Q Consensus       561 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  640 (702)
                      .......  ......||+.|+|||++.+..++.++||||||+++|+|++|..||....   .....     ..+......
T Consensus       167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~---~~~~~-----~~i~~~~~~  236 (361)
T 2yab_A          167 HEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETL-----ANITAVSYD  236 (361)
T ss_dssp             EECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS---HHHHH-----HHHHTTCCC
T ss_pred             eEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC---HHHHH-----HHHHhcCCC
Confidence            8764432  2345679999999999998899999999999999999999999996531   11111     111111110


Q ss_pred             cccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          641 KLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       641 ~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                        .+.......++.+.++|.+||+.||++|||++|+++
T Consensus       237 --~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          237 --FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             --CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             --CCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence              011111223567889999999999999999999985

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.98  E-value=1.5e-32  Score=289.13  Aligned_cols=231  Identities=20%  Similarity=0.170  Sum_probs=175.3

Q ss_pred             cccccccceEEEeEE--EEEeeeeh-hhhHhh-----------------------------eeeEEEEEecCCeeEEEEe
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF-LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~-~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      .+.++..++||+|++  ||++.... ..||+|                             |+++++++.+++..++|||
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            456667788999987  88877643 556665                             8888999999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      |+++ +|.+++......+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||++........ 
T Consensus       100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-  174 (311)
T 3niz_A          100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-  174 (311)
T ss_dssp             CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred             CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence            9985 89998887776799999999999999999999999   999999999999999999999999999987643322 


Q ss_pred             eeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccc-------
Q 038002          570 IVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNK-------  641 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  641 (702)
                      ......+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||...........+.... .......+..       
T Consensus       175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~  253 (311)
T 3niz_A          175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL-GTPNPREWPQVQELPLW  253 (311)
T ss_dssp             ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHH-CCCCTTTSGGGTTSHHH
T ss_pred             cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHH-CCCChHHhhhhhccchh
Confidence            2334568999999998865 568999999999999999999999997653222111111100 0000000000       


Q ss_pred             ------cccc----ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          642 ------LVEE----EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       642 ------~~~~----~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                            ....    .......+++.+++.+||+.||++|||++|+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                  0000    112234567889999999999999999999986

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.98  E-value=1.4e-32  Score=299.75  Aligned_cols=222  Identities=18%  Similarity=0.144  Sum_probs=176.1

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +.+...+.||+|++  ||++....  ..+|+|                              |++++.++++++..|+||
T Consensus        69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~  148 (410)
T 3v8s_A           69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM  148 (410)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            44556788999988  88877654  556665                              788899999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||++||+|.+++...  .+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.......
T Consensus       149 E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~  223 (410)
T 3v8s_A          149 EYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM  223 (410)
T ss_dssp             CCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred             eCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence            999999999999764  589999999999999999999999   999999999999999999999999999987755443


Q ss_pred             ceeeceeccccccCcccccCCC----CCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGL----ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      .......||+.|+|||++.+..    ++.++|||||||++|||++|+.||.....   ....     ..+......... 
T Consensus       224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~---~~~~-----~~i~~~~~~~~~-  294 (410)
T 3v8s_A          224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL---VGTY-----SKIMNHKNSLTF-  294 (410)
T ss_dssp             EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHH-----HHHHTHHHHCCC-
T ss_pred             ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh---hhHH-----HHHHhccccccC-
Confidence            3344678999999999987654    78999999999999999999999974411   1111     111111000000 


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNL--RPSMKNVILM  679 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~--RPt~~evl~~  679 (702)
                       ......+..+.++|.+||+.+|.+  ||+++||++.
T Consensus       295 -p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          295 -PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             -CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             -CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence             011124567889999999999988  9999999974

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.98  E-value=3.7e-33  Score=293.87  Aligned_cols=214  Identities=19%  Similarity=0.168  Sum_probs=171.6

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +.++..++||+|++  ||++....  ..||||                              |+++++++.+++..++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            45666788999988  89887753  667776                              778899999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+ +++|.+++......+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||++....... 
T Consensus       137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~-  211 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG-  211 (311)
T ss_dssp             ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred             ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence            999 6799999987766799999999999999999999999   99999999999999999999999999998764332 


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                       ......||+.|+|||++.+ .++.++||||||+++|||++|..|+...    .       .......+...    ....
T Consensus       212 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~-------~~~~~~~~~~~----~~~~  274 (311)
T 3p1a_A          212 -AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----E-------GWQQLRQGYLP----PEFT  274 (311)
T ss_dssp             ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----H-------HHHHHTTTCCC----HHHH
T ss_pred             -CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----c-------HHHHHhccCCC----cccc
Confidence             2334568999999998875 7899999999999999999997766422    0       01111111111    1122


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ....+.+.+++.+||+.||++|||++|+++
T Consensus       275 ~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          275 AGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            234567899999999999999999999986

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.98  E-value=6.9e-33  Score=293.45  Aligned_cols=223  Identities=21%  Similarity=0.224  Sum_probs=175.7

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCCeeEEEEe
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      .+.++..+.||+|++  ||++....  ..||+|                            |+++++++.+++..++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            456677788888877  88776543  556665                            7888899999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC-
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT-  568 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-  568 (702)
                      |+++++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++..+..... 
T Consensus        86 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  161 (323)
T 3tki_A           86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  161 (323)
T ss_dssp             CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence            999999999997654 699999999999999999999999   999999999999999999999999999987643222 


Q ss_pred             ceeeceeccccccCcccccCCCC-CccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLI-TVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                      .......||+.|+|||++.+..+ +.++||||||+++|||++|+.||........  ....+     .......    ..
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~~~-----~~~~~~~----~~  230 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDW-----KEKKTYL----NP  230 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH--HHHHH-----HTTCTTS----TT
T ss_pred             cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHH-----hcccccC----Cc
Confidence            22345679999999999877665 7899999999999999999999975422211  11111     1111000    01


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .......+.+++.+||+.||++|||++|+++.
T Consensus       231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          231 WKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            12335677899999999999999999999875

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.98  E-value=2.4e-32  Score=303.90  Aligned_cols=232  Identities=17%  Similarity=0.147  Sum_probs=182.5

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      .+.++..++||+|++  ||++....  ..||||                          |..+..++..++..+|||||+
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~   85 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL   85 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence            345667788999988  88887543  677777                          445567778899999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE---eCCCcEEEecccceeecCCCCC
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                       +++|.+++......+++.+++.++.||+.||+|||++   +|+||||||+|||+   +.++.+||+|||+++.+.....
T Consensus        86 -g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~  161 (483)
T 3sv0_A           86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST  161 (483)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             -CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence             9999999987666899999999999999999999999   99999999999999   6889999999999987754432


Q ss_pred             c------eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccc
Q 038002          569 G------IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKL  642 (702)
Q Consensus       569 ~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  642 (702)
                      .      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...........+...... .....+.  
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~-~~~~~~~--  238 (483)
T 3sv0_A          162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK-KVATSIE--  238 (483)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH-HHHSCHH--
T ss_pred             ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc-cccccHH--
Confidence            1      122567999999999999999999999999999999999999999765332222222111111 1111111  


Q ss_pred             cccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          643 VEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       643 ~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                         ......+.++.+++.+||+.||++||++++|+++|+.+
T Consensus       239 ---~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          239 ---ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             ---HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             ---HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence               11112356789999999999999999999999999865

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.98  E-value=5.7e-33  Score=285.94  Aligned_cols=221  Identities=27%  Similarity=0.306  Sum_probs=166.8

Q ss_pred             ccccccceEEEeEE--EEEeeeehhhhHhh-------------------------------eeeEEEEEecCCeeEEEEe
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITFLCFLIA-------------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~~~~avk-------------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      ..++..+.||+|++  ||++......+|+|                               |+++++++.+++..++|||
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME   86 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred             hheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence            34555678888877  78776555555554                               7788899999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCC---eEecCCCCCcEEEeC--------CCcEEEeccc
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ---IIHCDIKLRNILIDD--------SWRAKISDFG  558 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~---ivH~dlkp~NIll~~--------~~~~kl~Dfg  558 (702)
                      |+++++|.+++..  ..+++.++..++.|++.||+|||++   +   |+||||||+||+++.        ++.+||+|||
T Consensus        87 ~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~---~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg  161 (271)
T 3dtc_A           87 FARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDE---AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG  161 (271)
T ss_dssp             CCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHS---SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred             cCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence            9999999999964  3689999999999999999999999   7   999999999999986        7789999999


Q ss_pred             ceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccc
Q 038002          559 LAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGE  638 (702)
Q Consensus       559 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  638 (702)
                      ++........   ....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....    ....   ... .....
T Consensus       162 ~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~~~~---~~~-~~~~~  230 (271)
T 3dtc_A          162 LAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID----GLAV---AYG-VAMNK  230 (271)
T ss_dssp             C----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC----HHHH---HHH-HHTSC
T ss_pred             cccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHH---HHh-hhcCC
Confidence            9986543322   24568999999999988899999999999999999999999996431    1111   111 11111


Q ss_pred             cccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          639 FNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       639 ~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      .    ....+...++.+.+++.+||+.||++|||++|++++|+.+
T Consensus       231 ~----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          231 L----ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             C----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             C----CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            1    1122334456789999999999999999999999999864

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.98  E-value=6.1e-33  Score=300.92  Aligned_cols=229  Identities=25%  Similarity=0.289  Sum_probs=181.1

Q ss_pred             ccccccceEEEeEE--EEEeeeeh---------hhhHhh-----------------------------eeeEEEEEecCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF---------LCFLIA-----------------------------ISSLLVYKHRSS  482 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~---------~~~avk-----------------------------i~~l~~~~~~~~  482 (702)
                      +.+...++||+|++  ||++....         ..||+|                             |+++++++.+++
T Consensus        69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  148 (382)
T 3tt0_A           69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG  148 (382)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence            44555678999987  88776421         235554                             888999999999


Q ss_pred             eeEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe
Q 038002          483 KKLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       483 ~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  547 (702)
                      ..++||||+++|+|.+++....               ..+++.+++.++.||+.||+|||++   +|+||||||+|||++
T Consensus       149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~  225 (382)
T 3tt0_A          149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT  225 (382)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred             ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEc
Confidence            9999999999999999997653               3489999999999999999999999   999999999999999


Q ss_pred             CCCcEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhh
Q 038002          548 DSWRAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVL  625 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~  625 (702)
                      .++.+||+|||++........ .......+|+.|+|||++.+..++.++||||||+++|||++ |..||....    ...
T Consensus       226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~----~~~  301 (382)
T 3tt0_A          226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP----VEE  301 (382)
T ss_dssp             TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC----HHH
T ss_pred             CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC----HHH
Confidence            999999999999987644322 22334567889999999999999999999999999999999 999996431    111


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCC
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP  687 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~  687 (702)
                          .......+..     ...+......+.+++.+||+.||++|||++||++.|+.+....
T Consensus       302 ----~~~~~~~~~~-----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  354 (382)
T 3tt0_A          302 ----LFKLLKEGHR-----MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT  354 (382)
T ss_dssp             ----HHHHHHTTCC-----CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred             ----HHHHHHcCCC-----CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence                1111111111     1122234567899999999999999999999999999875433

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.98  E-value=1.3e-32  Score=294.19  Aligned_cols=205  Identities=17%  Similarity=0.198  Sum_probs=158.7

Q ss_pred             eeeEEEEEec----CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE
Q 038002          471 ISSLLVYKHR----SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI  546 (702)
Q Consensus       471 i~~l~~~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  546 (702)
                      |+++++++..    +...++||||+ +++|.+++.... .+++.+++.++.||+.||+|||++   +|+||||||+||++
T Consensus       110 i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll  184 (345)
T 2v62_A          110 IPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLL  184 (345)
T ss_dssp             CCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred             cceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEE
Confidence            5566766666    78999999999 999999998765 799999999999999999999999   99999999999999


Q ss_pred             eCCC--cEEEecccceeecCCCCC------ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCC
Q 038002          547 DDSW--RAKISDFGLAKLLMPNQT------GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNV  618 (702)
Q Consensus       547 ~~~~--~~kl~Dfg~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~  618 (702)
                      +.++  .+||+|||+++.+.....      .......||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus       185 ~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~  264 (345)
T 2v62_A          185 GYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNL  264 (345)
T ss_dssp             ESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGT
T ss_pred             ccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence            9887  999999999987643221      11134578999999999998899999999999999999999999996432


Q ss_pred             CCcchhhhHHHHHHhhhcccccccccc-ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          619 STADEVLLSTWVYNCFVAGEFNKLVEE-EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ........   ..... ...+...+.. ......++.+.+++.+||+.||++||++++|+++|+...
T Consensus       265 ~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          265 KDPVAVQT---AKTNL-LDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             TCHHHHHH---HHHHH-HHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             cccHHHHH---HHHhh-cccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            22111111   11110 0111111111 001134568999999999999999999999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.98  E-value=5.6e-33  Score=303.16  Aligned_cols=224  Identities=19%  Similarity=0.165  Sum_probs=175.0

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +.++..+.||+|++  ||++....  ..||+|                              |++++..+++++..||||
T Consensus        61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVm  140 (412)
T 2vd5_A           61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM  140 (412)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred             hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            34556678899987  78777643  556665                              788889999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+++|+|.+++.+.+..+++..+..++.||+.||+|||++   +|+||||||+|||++.++++||+|||+++.......
T Consensus       141 E~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~  217 (412)
T 2vd5_A          141 EYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT  217 (412)
T ss_dssp             CCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred             cCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence            99999999999987655799999999999999999999999   999999999999999999999999999988755444


Q ss_pred             ceeeceeccccccCccccc-------CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccc
Q 038002          569 GIVAGVRGSRGYMAPEWQN-------SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNK  641 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  641 (702)
                      .......||+.|+|||++.       ...++.++|||||||++|||++|+.||.....   ......     +..... .
T Consensus       218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~---~~~~~~-----i~~~~~-~  288 (412)
T 2vd5_A          218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST---AETYGK-----IVHYKE-H  288 (412)
T ss_dssp             EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHH-----HHTHHH-H
T ss_pred             cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH---HHHHHH-----HHhccc-C
Confidence            3334568999999999886       45789999999999999999999999965411   111111     111000 0


Q ss_pred             ccccccCHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 038002          642 LVEEEVDKITLERMVKTGLLCIQDEPNLR---PSMKNVILM  679 (702)
Q Consensus       642 ~~~~~~~~~~~~~l~~li~~cL~~dP~~R---Pt~~evl~~  679 (702)
                      ...+......+..+.++|.+||+ +|++|   |+++|+++.
T Consensus       289 ~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          289 LSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             CCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             cCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence            00011122345688999999999 99998   589998863

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.98  E-value=3.1e-33  Score=302.59  Aligned_cols=226  Identities=21%  Similarity=0.231  Sum_probs=178.8

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      +.+...+.||+|++  ||++....  ..||||                            |+++++++..++..++||||
T Consensus       114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  193 (377)
T 3cbl_A          114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL  193 (377)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence            34455678888877  88887652  566666                            88899999999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      +++|+|.+++......+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.........
T Consensus       194 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~  270 (377)
T 3cbl_A          194 VQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA  270 (377)
T ss_dssp             CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence            999999999987665799999999999999999999999   99999999999999999999999999998653322111


Q ss_pred             e-eceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          571 V-AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       571 ~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                      . ....+++.|+|||.+....++.++||||||+++|||++ |..||.....    .....    ....+..     ...+
T Consensus       271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~----~~~~~----~~~~~~~-----~~~~  337 (377)
T 3cbl_A          271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN----QQTRE----FVEKGGR-----LPCP  337 (377)
T ss_dssp             CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH----HHHHH----HHHTTCC-----CCCC
T ss_pred             cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----HHHHH----HHHcCCC-----CCCC
Confidence            1 12345778999999988889999999999999999998 9999964311    11111    1111110     1122


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ...++.+.+++.+||+.||++|||+++|++.|+.+.
T Consensus       338 ~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~  373 (377)
T 3cbl_A          338 ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR  373 (377)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            234567889999999999999999999999998753

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.98  E-value=1.4e-32  Score=286.23  Aligned_cols=230  Identities=24%  Similarity=0.313  Sum_probs=166.7

Q ss_pred             cccccccceEEEeEE--EEEeeeehhhhHhh-----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITFLCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      ...++..++||+|++  ||++.... .+|+|                             |++++++ ......++||||
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~-~~~~~~~lv~e~  100 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STAPQLAIVTQW  100 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEE-ECSSSCEEEEEC
T ss_pred             ccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEee-ccCCccEEEEEe
Confidence            455666788999988  88776432 24444                             6666664 466778999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC-Cc
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ-TG  569 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-~~  569 (702)
                      +++++|.+++......+++.+++.++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++....... ..
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  177 (289)
T 3og7_A          101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH  177 (289)
T ss_dssp             CCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred             cCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccccc
Confidence            999999999987776799999999999999999999999   99999999999999999999999999998654322 22


Q ss_pred             eeeceeccccccCccccc---CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          570 IVAGVRGSRGYMAPEWQN---SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                      ......||+.|+|||.+.   ...++.++||||||+++|||++|+.||......   ......    ...+...... ..
T Consensus       178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~----~~~~~~~~~~-~~  249 (289)
T 3og7_A          178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR---DQIIEM----VGRGSLSPDL-SK  249 (289)
T ss_dssp             ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH---HHHHHH----HHHTSCCCCT-TS
T ss_pred             cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH---HHHHHH----hcccccCcch-hh
Confidence            234467899999999886   567889999999999999999999999754211   111111    1111111111 11


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .....+..+.+++.+||+.||++|||+++++++|+.+.
T Consensus       250 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          250 VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            22344678999999999999999999999999999865

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=2.6e-32  Score=290.17  Aligned_cols=238  Identities=21%  Similarity=0.255  Sum_probs=179.1

Q ss_pred             ccccccceEEEeEE--EEEeeeehhhhHhh--------------------------eeeEEEEEecC----CeeEEEEec
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITFLCFLIA--------------------------ISSLLVYKHRS----SKKLLVYEF  490 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~~~~avk--------------------------i~~l~~~~~~~----~~~~lV~e~  490 (702)
                      +.++..+.||+|++  ||++......||+|                          |+++++++...    ...++||||
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~  116 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDY  116 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECC
T ss_pred             cceEEEeEeecCCCeEEEEEEECCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEec
Confidence            45666789999987  89888777777777                          77778777766    789999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcC-----CCCeEecCCCCCcEEEeCCCcEEEecccceeecCC
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC-----EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP  565 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~  565 (702)
                      +++|+|.+++...  .+++.+++.++.|++.||+|||+++     ..+|+||||||+||+++.++.+||+|||++..+..
T Consensus       117 ~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~  194 (337)
T 3mdy_A          117 HENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS  194 (337)
T ss_dssp             CTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             cCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeecc
Confidence            9999999999764  5899999999999999999999751     23899999999999999999999999999987644


Q ss_pred             CCCce---eeceeccccccCcccccCCCCCcc------ccccchhHhHHHhhhC----------CcCCcCCCCCcchhhh
Q 038002          566 NQTGI---VAGVRGSRGYMAPEWQNSGLITVK------SDVYSFGVVLLEIICC----------RSNFEVNVSTADEVLL  626 (702)
Q Consensus       566 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~DiwSlGvil~elltG----------~~Pf~~~~~~~~~~~~  626 (702)
                      .....   .....||+.|+|||.+.+.....+      +||||||+++|||++|          +.||........... 
T Consensus       195 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~-  273 (337)
T 3mdy_A          195 DTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYE-  273 (337)
T ss_dssp             --------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHH-
T ss_pred             ccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchh-
Confidence            33221   124579999999999887666554      9999999999999999          556543322111111 


Q ss_pred             HHHHHHhhhcccccccccc-ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          627 STWVYNCFVAGEFNKLVEE-EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                       . ................ .......+.+.+++.+||+.||++|||++||++.|+.+.+
T Consensus       274 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  331 (337)
T 3mdy_A          274 -D-MREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE  331 (337)
T ss_dssp             -H-HHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -h-hHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence             0 1111111111111111 1233678889999999999999999999999999998654

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.98  E-value=4.7e-32  Score=284.50  Aligned_cols=231  Identities=31%  Similarity=0.439  Sum_probs=180.6

Q ss_pred             cceEEEeEE--EEEeeeehhhhHhh-------------------------------eeeEEEEEecCCeeEEEEecCCCC
Q 038002          448 KRKLLTVLA--GCLGSITFLCFLIA-------------------------------ISSLLVYKHRSSKKLLVYEFMSKG  494 (702)
Q Consensus       448 ~~~l~~g~~--v~~~~~~~~~~avk-------------------------------i~~l~~~~~~~~~~~lV~e~~~~g  494 (702)
                      .+.||+|++  ||++......+|+|                               |+++++++.+++..++||||++++
T Consensus        36 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  115 (307)
T 2nru_A           36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG  115 (307)
T ss_dssp             CCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             CCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCC
Confidence            467888877  77776554555554                               888899999999999999999999


Q ss_pred             CHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc-ee
Q 038002          495 SLADLLFNL--ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG-IV  571 (702)
Q Consensus       495 sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~  571 (702)
                      +|.+++...  ...+++..++.++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++......... ..
T Consensus       116 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  192 (307)
T 2nru_A          116 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMT  192 (307)
T ss_dssp             BHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEEC
T ss_pred             cHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCCcEEEeecccccccccccccccc
Confidence            999999753  23589999999999999999999999   9999999999999999999999999999876543322 23


Q ss_pred             eceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccc---ccC
Q 038002          572 AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE---EVD  648 (702)
Q Consensus       572 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  648 (702)
                      ....|++.|+|||.+.+ .++.++||||||+++|+|++|..||.................  .....+...++.   ..+
T Consensus       193 ~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  269 (307)
T 2nru_A          193 SRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIE--DEEKTIEDYIDKKMNDAD  269 (307)
T ss_dssp             SSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHH--TTSCCHHHHSCSSCSCCC
T ss_pred             cccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhh--hhhhhhhhhccccccccc
Confidence            34578999999998765 478999999999999999999999976533221111111110  011112222222   345


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ....+.+.+++.+||+.||++|||+++|+++|+++.
T Consensus       270 ~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          270 STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            677889999999999999999999999999998764

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.98  E-value=5.4e-33  Score=287.99  Aligned_cols=226  Identities=21%  Similarity=0.246  Sum_probs=166.7

Q ss_pred             cccccccceEEEeEE--EEEeeeeh-----hhhHhh----------------------------eeeEEEEEecCCeeEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF-----LCFLIA----------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~-----~~~avk----------------------------i~~l~~~~~~~~~~~l  486 (702)
                      .+.++..+.||+|++  ||++....     ..+|+|                            |+++++++ .++..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEE
Confidence            455666778899887  88776532     234444                            78888777 4567899


Q ss_pred             EEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCC
Q 038002          487 VYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  566 (702)
                      ||||+++++|.+++......+++.++..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++......
T Consensus        93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  169 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS  169 (281)
T ss_dssp             EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred             EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCcc
Confidence            9999999999999987766799999999999999999999999   9999999999999999999999999999876543


Q ss_pred             CCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhcccccccccc
Q 038002          567 QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE  645 (702)
Q Consensus       567 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  645 (702)
                      .........+++.|+|||.+....++.++||||||+++|||++ |..||......  + ..     .....+..     .
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~-~~-----~~i~~~~~-----~  236 (281)
T 1mp8_A          170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--D-VI-----GRIENGER-----L  236 (281)
T ss_dssp             ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--G-HH-----HHHHTTCC-----C
T ss_pred             cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--H-HH-----HHHHcCCC-----C
Confidence            3323334456789999999988899999999999999999997 99999754211  1 11     11111111     1


Q ss_pred             ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          646 EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       646 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ..+...+..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus       237 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  275 (281)
T 1mp8_A          237 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  275 (281)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            122344567889999999999999999999999998753

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.98  E-value=3.9e-33  Score=299.49  Aligned_cols=228  Identities=24%  Similarity=0.300  Sum_probs=177.0

Q ss_pred             cccccccceEEEeEE--EEEeeeeh-------hhhHhh-----------------------------eeeEEEEEecC-C
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF-------LCFLIA-----------------------------ISSLLVYKHRS-S  482 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~-------~~~avk-----------------------------i~~l~~~~~~~-~  482 (702)
                      .+.++..+.||+|++  ||++....       ..||||                             |+++++++.+. .
T Consensus        21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~  100 (359)
T 3vhe_A           21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  100 (359)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence            345566778899887  88875321       445555                             78888877764 4


Q ss_pred             eeEEEEecCCCCCHHHHhhcCCC---------------------------------------------------------
Q 038002          483 KKLLVYEFMSKGSLADLLFNLET---------------------------------------------------------  505 (702)
Q Consensus       483 ~~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------------  505 (702)
                      ..++||||+++|+|.+++.....                                                         
T Consensus       101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (359)
T 3vhe_A          101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  180 (359)
T ss_dssp             CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred             ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence            59999999999999999986542                                                         


Q ss_pred             --------CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC-ceeeceec
Q 038002          506 --------RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT-GIVAGVRG  576 (702)
Q Consensus       506 --------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~g  576 (702)
                              .+++.+++.++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++........ .......|
T Consensus       181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  257 (359)
T 3vhe_A          181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL  257 (359)
T ss_dssp             ---CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred             cccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCC
Confidence                    178899999999999999999999   999999999999999999999999999987644333 23345678


Q ss_pred             cccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHH
Q 038002          577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERM  655 (702)
Q Consensus       577 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  655 (702)
                      |+.|+|||++.+..++.++||||||+++|||++ |+.||.......  . .    ......+.     ....+......+
T Consensus       258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~-~----~~~~~~~~-----~~~~~~~~~~~l  325 (359)
T 3vhe_A          258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--E-F----CRRLKEGT-----RMRAPDYTTPEM  325 (359)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--H-H----HHHHHHTC-----CCCCCTTCCHHH
T ss_pred             CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH--H-H----HHHHHcCC-----CCCCCCCCCHHH
Confidence            999999999988999999999999999999998 999997542221  1 1    11111111     111222345678


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          656 VKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       656 ~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .+++.+||+.||++|||++||+++|+.+.
T Consensus       326 ~~li~~~l~~dP~~Rps~~ell~~L~~~~  354 (359)
T 3vhe_A          326 YQTMLDCWHGEPSQRPTFSELVEHLGNLL  354 (359)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence            89999999999999999999999998754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.98  E-value=1.7e-32  Score=292.92  Aligned_cols=220  Identities=18%  Similarity=0.258  Sum_probs=170.0

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------------eeeEEEEEecCCeeEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      +.++..+.||+|++  ||++....  ..+|+|                               |++++.++++++..|+|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            34455677888876  77666442  344444                               88889999999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++......
T Consensus        89 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~  164 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG  164 (345)
T ss_dssp             ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred             EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence            99999999999997654 799999999999999999999999   99999999999999999999999999998643222


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcch-hhhHHHHHHhhhccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE-VLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                       .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..........+.....      .
T Consensus       165 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~  237 (345)
T 3a8x_A          165 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------R  237 (345)
T ss_dssp             -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------C
T ss_pred             -CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------C
Confidence             2234567999999999999999999999999999999999999999653221110 0111112222222211      1


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCH
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSM  673 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~  673 (702)
                      .+...+..+.+++.+||+.||++||++
T Consensus       238 ~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          238 IPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence            223445678899999999999999996

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.98  E-value=1.1e-32  Score=295.00  Aligned_cols=217  Identities=21%  Similarity=0.247  Sum_probs=173.6

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------------eeeEEEEEecCCeeEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      ..++..+.||+|++  ||++....  ..||+|                               |++++..+++.+..|+|
T Consensus        20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   99 (353)
T 2i0e_A           20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV   99 (353)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence            34555678999987  78776543  455555                               77888999999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |||++||+|.+++...+ .+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++......
T Consensus       100 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  175 (353)
T 2i0e_A          100 MEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG  175 (353)
T ss_dssp             EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence            99999999999998654 699999999999999999999999   99999999999999999999999999998643222


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                       .......||+.|+|||++.+..++.++||||||+++|||++|+.||....   ...     ....+.....      ..
T Consensus       176 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~---~~~-----~~~~i~~~~~------~~  240 (353)
T 2i0e_A          176 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED---EDE-----LFQSIMEHNV------AY  240 (353)
T ss_dssp             -CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS---HHH-----HHHHHHHCCC------CC
T ss_pred             -cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC---HHH-----HHHHHHhCCC------CC
Confidence             22345679999999999999999999999999999999999999996431   111     1111111111      12


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPS-----MKNVIL  678 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~  678 (702)
                      +...+..+.+++.+||+.||++||+     +++|++
T Consensus       241 p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          241 PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            2344668899999999999999995     467665

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.98  E-value=7.3e-33  Score=293.53  Aligned_cols=224  Identities=21%  Similarity=0.211  Sum_probs=155.4

Q ss_pred             cceEEEeEE--EEEeeeeh--hhhHhh-------------------------eeeEEEEEecCCeeEEEEecCCCCCHHH
Q 038002          448 KRKLLTVLA--GCLGSITF--LCFLIA-------------------------ISSLLVYKHRSSKKLLVYEFMSKGSLAD  498 (702)
Q Consensus       448 ~~~l~~g~~--v~~~~~~~--~~~avk-------------------------i~~l~~~~~~~~~~~lV~e~~~~gsL~~  498 (702)
                      .+.||+|++  ||++....  ..||+|                         |+++++++++++..|+||||+++|+|.+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   95 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFE   95 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHH
Confidence            367888877  77776643  556666                         8889999999999999999999999999


Q ss_pred             HhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC---cEEEecccceeecCCCCCceeecee
Q 038002          499 LLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW---RAKISDFGLAKLLMPNQTGIVAGVR  575 (702)
Q Consensus       499 ~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~  575 (702)
                      ++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++   .+||+|||++....... .......
T Consensus        96 ~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~  170 (325)
T 3kn6_A           96 RIKKKK-HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLKTPC  170 (325)
T ss_dssp             HHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------
T ss_pred             HHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-CcccccC
Confidence            998764 799999999999999999999999   999999999999997766   89999999998754332 2234556


Q ss_pred             ccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHH
Q 038002          576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERM  655 (702)
Q Consensus       576 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  655 (702)
                      ||+.|+|||.+.+..++.++||||||+++|||++|+.||............. .....+..+...  ...+.....++.+
T Consensus       171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~-~~~~~i~~~~~~--~~~~~~~~~s~~~  247 (325)
T 3kn6_A          171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAV-EIMKKIKKGDFS--FEGEAWKNVSQEA  247 (325)
T ss_dssp             -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHH-HHHHHHTTTCCC--CCSHHHHTSCHHH
T ss_pred             CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHH-HHHHHHHcCCCC--CCcccccCCCHHH
Confidence            8999999999999999999999999999999999999997542211111111 112222222211  1111112346788


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHHH
Q 038002          656 VKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       656 ~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .+++.+||+.||++|||++|+++.
T Consensus       248 ~~li~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          248 KDLIQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             HHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred             HHHHHHHCCCChhHCCCHHHHhcC
Confidence            999999999999999999999853

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.97  E-value=8.8e-33  Score=298.04  Aligned_cols=187  Identities=21%  Similarity=0.247  Sum_probs=152.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+++++..|+||||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus       101 Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g  176 (373)
T 2r5t_A          101 LVGLHFSFQTADKLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQG  176 (373)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTS
T ss_pred             CCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCC
Confidence            7788899999999999999999999999997654 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....   ...     .
T Consensus       177 ~ikL~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~---~~~-----~  247 (373)
T 2r5t_A          177 HIVLTDFGLCKENIEHN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN---TAE-----M  247 (373)
T ss_dssp             CEEECCCCBCGGGBCCC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB---HHH-----H
T ss_pred             CEEEeeCccccccccCC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC---HHH-----H
Confidence            99999999998643222 22345679999999999999999999999999999999999999996431   111     1


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNV  676 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~ev  676 (702)
                      ...+.....      ..+......+.+++.+||+.||++||++.+.
T Consensus       248 ~~~i~~~~~------~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~  287 (373)
T 2r5t_A          248 YDNILNKPL------QLKPNITNSARHLLEGLLQKDRTKRLGAKDD  287 (373)
T ss_dssp             HHHHHHSCC------CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTT
T ss_pred             HHHHHhccc------CCCCCCCHHHHHHHHHHcccCHHhCCCCCCC
Confidence            111111111      1122345678899999999999999998543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.97  E-value=1.8e-32  Score=302.13  Aligned_cols=224  Identities=17%  Similarity=0.166  Sum_probs=175.5

Q ss_pred             CcccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEE
Q 038002          441 GNDKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       441 ~~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      +.+.++..+.||+|++  ||++....  ..+|+|                             |+++++++.+++..|+|
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            3456667788999988  88775432  445544                             88999999999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe---CCCcEEEecccceeecC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID---DSWRAKISDFGLAKLLM  564 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~a~~~~  564 (702)
                      |||+++|+|.+.+.... .+++.++..++.||+.||+|||++   +|+||||||+|||++   .++.+||+|||++....
T Consensus        89 ~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~  164 (444)
T 3soa_A           89 FDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE  164 (444)
T ss_dssp             ECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred             EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence            99999999999998765 699999999999999999999999   999999999999998   46789999999998764


Q ss_pred             CCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          565 PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       565 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      .... ......||+.|+|||++.+..++.++|||||||++|+|++|..||....    ...    ....+..+....  .
T Consensus       165 ~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~----~~~----~~~~i~~~~~~~--~  233 (444)
T 3soa_A          165 GEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED----QHR----LYQQIKAGAYDF--P  233 (444)
T ss_dssp             TTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHH----HHHHHHHTCCCC--C
T ss_pred             CCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc----HHH----HHHHHHhCCCCC--C
Confidence            3322 2345679999999999998899999999999999999999999996431    111    111112221111  1


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .......++.+.+++.+||+.||++|||++|+++.
T Consensus       234 ~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          234 SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            11112345678899999999999999999999873

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.9e-32  Score=292.37  Aligned_cols=200  Identities=27%  Similarity=0.370  Sum_probs=162.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCC----------------------CCCHHHHHHHHHHHHHHHHhhhh
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLET----------------------RPLWRDRVRIALDVARGLLYLHD  528 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~----------------------~~~~~~~~~i~~qi~~aL~~LH~  528 (702)
                      |+++++++..++..++||||+++|+|.+++.....                      .+++.+++.++.||+.||+|||+
T Consensus       111 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  190 (344)
T 1rjb_A          111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF  190 (344)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh
Confidence            78888999999999999999999999999987542                      27889999999999999999999


Q ss_pred             cCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHh
Q 038002          529 ECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEI  607 (702)
Q Consensus       529 ~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el  607 (702)
                      +   +|+||||||+||+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|||
T Consensus       191 ~---~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el  267 (344)
T 1rjb_A          191 K---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI  267 (344)
T ss_dssp             T---TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             C---CcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHH
Confidence            9   9999999999999999999999999999876443332 23456678899999999888999999999999999999


Q ss_pred             hh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          608 IC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       608 lt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ++ |..||.......   .....    ...+ .    ....+...++.+.+++.+||+.||++|||+++|++.|+.+..
T Consensus       268 ~t~g~~p~~~~~~~~---~~~~~----~~~~-~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          268 FSLGVNPYPGIPVDA---NFYKL----IQNG-F----KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             TTTSCCSSTTCCCSH---HHHHH----HHTT-C----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             HcCCCCCcccCCcHH---HHHHH----HhcC-C----CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            98 999997542211   11111    1111 1    111223345678999999999999999999999999998653

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.97  E-value=5.5e-33  Score=296.53  Aligned_cols=216  Identities=21%  Similarity=0.272  Sum_probs=173.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------------eeeEEEEEecCCeeEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      +.+...+.||+|++  ||++....  ..||+|                               |++++..+++++..|+|
T Consensus        17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv   96 (345)
T 1xjd_A           17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   96 (345)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence            34556678999987  88877543  445555                               78889999999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++......
T Consensus        97 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  172 (345)
T 1xjd_A           97 MEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD  172 (345)
T ss_dssp             EECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC
Confidence            99999999999998654 689999999999999999999999   99999999999999999999999999998643222


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                       .......||+.|+|||++.+..++.++||||||+++|||++|+.||....   ...     ....+....      ...
T Consensus       173 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~---~~~-----~~~~i~~~~------~~~  237 (345)
T 1xjd_A          173 -AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD---EEE-----LFHSIRMDN------PFY  237 (345)
T ss_dssp             -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHH-----HHHHHHHCC------CCC
T ss_pred             -CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC---HHH-----HHHHHHhCC------CCC
Confidence             22345679999999999999999999999999999999999999996431   111     111111111      112


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSMK-NVI  677 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~~-evl  677 (702)
                      +...+..+.+++.+||+.||++||++. +|+
T Consensus       238 p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          238 PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            223456788999999999999999997 665

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=3.2e-32  Score=294.38  Aligned_cols=219  Identities=21%  Similarity=0.265  Sum_probs=174.2

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +.+...+.||+|++  ||++....  ..+|+|                              |++++.++++++..|+||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            44556678888887  77776543  445555                              888999999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+++|+|.+++.... .+++..+..++.||+.||+|||++   ||+||||||+|||++.++.+||+|||++....... 
T Consensus        95 e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-  169 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET-  169 (384)
T ss_dssp             CCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred             ecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCCC-
Confidence            9999999999998754 799999999999999999999999   99999999999999999999999999998764332 


Q ss_pred             ceeeceeccccccCcccccC---CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccc
Q 038002          569 GIVAGVRGSRGYMAPEWQNS---GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE  645 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  645 (702)
                       ......||+.|+|||++..   ..++.++|||||||++|||++|+.||.............     ......      .
T Consensus       170 -~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~-----~~~~~~------~  237 (384)
T 4fr4_A          170 -QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH-----TFETTV------V  237 (384)
T ss_dssp             -CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHH-----HHHHCC------C
T ss_pred             -ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHH-----HHhhcc------c
Confidence             2445679999999998863   458999999999999999999999997543222111111     111111      1


Q ss_pred             ccCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 038002          646 EVDKITLERMVKTGLLCIQDEPNLRPS-MKNVIL  678 (702)
Q Consensus       646 ~~~~~~~~~l~~li~~cL~~dP~~RPt-~~evl~  678 (702)
                      ..+...+..+.+++.+||+.||++||+ +++|++
T Consensus       238 ~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          238 TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            123334678899999999999999998 777764

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.97  E-value=3.4e-32  Score=296.62  Aligned_cols=220  Identities=20%  Similarity=0.184  Sum_probs=162.8

Q ss_pred             ceEEEeEE--EEEeeeeh--hhhHhh-----------------------eeeEEEEEec----CCeeEEEEecCCCCCHH
Q 038002          449 RKLLTVLA--GCLGSITF--LCFLIA-----------------------ISSLLVYKHR----SSKKLLVYEFMSKGSLA  497 (702)
Q Consensus       449 ~~l~~g~~--v~~~~~~~--~~~avk-----------------------i~~l~~~~~~----~~~~~lV~e~~~~gsL~  497 (702)
                      +.||+|++  ||++....  ..||+|                       |++++++++.    ++..||||||+++|+|.
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~  147 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELF  147 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHH
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHH
Confidence            46777776  77666543  455655                       6777776654    77899999999999999


Q ss_pred             HHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC---CCcEEEecccceeecCCCCCceeec
Q 038002          498 DLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD---SWRAKISDFGLAKLLMPNQTGIVAG  573 (702)
Q Consensus       498 ~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~~~~~~~~  573 (702)
                      +++.... ..+++.++..++.||+.||+|||++   +|+||||||+|||++.   ++.+||+|||+++......  ....
T Consensus       148 ~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~--~~~~  222 (400)
T 1nxk_A          148 SRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--SLTT  222 (400)
T ss_dssp             HHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---------
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCCC--cccc
Confidence            9998754 3589999999999999999999999   9999999999999987   7899999999998754322  2345


Q ss_pred             eeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHH
Q 038002          574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLE  653 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  653 (702)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||..............    .+..+....  ........+.
T Consensus       223 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~----~i~~~~~~~--~~~~~~~~s~  296 (400)
T 1nxk_A          223 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT----RIRMGQYEF--PNPEWSEVSE  296 (400)
T ss_dssp             ----CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHH----HHHHTCCCC--CTTTTTTSCH
T ss_pred             CCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHH----HHHcCcccC--CCcccccCCH
Confidence            6789999999999999999999999999999999999999975532211110111    111111110  0011123456


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          654 RMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       654 ~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .+.++|.+||+.||++|||++|+++.
T Consensus       297 ~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          297 EVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            78999999999999999999999984

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.97  E-value=3.2e-32  Score=282.92  Aligned_cols=223  Identities=23%  Similarity=0.372  Sum_probs=172.9

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------------eeeEEEEEecCCe
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------------ISSLLVYKHRSSK  483 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------------i~~l~~~~~~~~~  483 (702)
                      .+.++..+.||+|++  ||++....  ..||+|                                  |+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            345556677888877  77776542  455555                                  667777776555 


Q ss_pred             eEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCC--eEecCCCCCcEEEeCCCc-----EEEec
Q 038002          484 KLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ--IIHCDIKLRNILIDDSWR-----AKISD  556 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivH~dlkp~NIll~~~~~-----~kl~D  556 (702)
                       ++||||+++++|.+++......+++..+..++.|++.||+|||++   +  |+||||||+||+++.++.     +||+|
T Consensus        97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D  172 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD  172 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred             -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence             799999999999999988777899999999999999999999999   8  999999999999988776     99999


Q ss_pred             ccceeecCCCCCceeeceeccccccCcccc--cCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhh
Q 038002          557 FGLAKLLMPNQTGIVAGVRGSRGYMAPEWQ--NSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF  634 (702)
Q Consensus       557 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~  634 (702)
                      ||++.....    ......||+.|+|||.+  ....++.++||||||+++|||++|+.||.......  ......    .
T Consensus       173 fg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~----~  242 (287)
T 4f0f_A          173 FGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK--IKFINM----I  242 (287)
T ss_dssp             CTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH--HHHHHH----H
T ss_pred             CCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH--HHHHHH----H
Confidence            999975422    23446789999999988  44567899999999999999999999997542221  111111    1


Q ss_pred             hccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       635 ~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      .....    ....+...++.+.+++.+||+.||++|||++|+++.|+++
T Consensus       243 ~~~~~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          243 REEGL----RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHSCC----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             hccCC----CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            11111    1122334456889999999999999999999999999864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.97  E-value=2.4e-32  Score=284.77  Aligned_cols=227  Identities=16%  Similarity=0.133  Sum_probs=170.4

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      +++..++||+|++  ||++....  ..||+|                             |+++++++.+++..++||||
T Consensus         3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   82 (292)
T 3o0g_A            3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             CceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEec
Confidence            3455677888877  77776543  456655                             78889999999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      +++ +|.+.+......+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++....... ..
T Consensus        83 ~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~  157 (292)
T 3o0g_A           83 CDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-RC  157 (292)
T ss_dssp             CSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-SC
T ss_pred             CCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc-cc
Confidence            976 66666666556799999999999999999999999   99999999999999999999999999998764322 22


Q ss_pred             eeceeccccccCcccccCCC-CCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhh---cccccccc---
Q 038002          571 VAGVRGSRGYMAPEWQNSGL-ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFV---AGEFNKLV---  643 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---  643 (702)
                      .....||+.|+|||.+.+.. ++.++||||||+++|||++|..||.......+  .+.. ......   ...+....   
T Consensus       158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~--~~~~-i~~~~~~~~~~~~~~~~~~~  234 (292)
T 3o0g_A          158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKR-IFRLLGTPTEEQWPSMTKLP  234 (292)
T ss_dssp             CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH--HHHH-HHHHHCCCCTTTCTTGGGST
T ss_pred             ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH--HHHH-HHHHhCCCChhhhhhhcccc
Confidence            34456899999999887655 79999999999999999999988754322111  1111 111100   00000000   


Q ss_pred             -------------ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          644 -------------EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       644 -------------~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                                   ...........+.+++.+||+.||++|||++|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence                         00122345678889999999999999999999986

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.97  E-value=2.7e-32  Score=288.12  Aligned_cols=213  Identities=23%  Similarity=0.239  Sum_probs=172.5

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEe
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      .++..+.||+|++  ||++....  ..+|+|                              |++++..+++++..|+|||
T Consensus         7 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e   86 (318)
T 1fot_A            7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD   86 (318)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEe
Confidence            4455677888877  77766542  445554                              8888999999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      |+++|+|.+++.... .+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.....   
T Consensus        87 ~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~---  159 (318)
T 1fot_A           87 YIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV---  159 (318)
T ss_dssp             CCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---
T ss_pred             CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc---
Confidence            999999999998755 789999999999999999999999   9999999999999999999999999999875332   


Q ss_pred             eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCH
Q 038002          570 IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK  649 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (702)
                       .....||+.|+|||++.+..++.++||||||+++|||++|+.||....   ...     ....+.....      ..+.
T Consensus       160 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---~~~-----~~~~i~~~~~------~~p~  224 (318)
T 1fot_A          160 -TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN---TMK-----TYEKILNAEL------RFPP  224 (318)
T ss_dssp             -BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS---HHH-----HHHHHHHCCC------CCCT
T ss_pred             -cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC---HHH-----HHHHHHhCCC------CCCC
Confidence             234579999999999999999999999999999999999999996431   111     1111111111      1223


Q ss_pred             HHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038002          650 ITLERMVKTGLLCIQDEPNLRP-----SMKNVIL  678 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RP-----t~~evl~  678 (702)
                      .....+.+++.+||+.||++||     +++|+++
T Consensus       225 ~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          225 FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence            3456788999999999999999     8899885

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.97  E-value=2.1e-32  Score=281.26  Aligned_cols=221  Identities=20%  Similarity=0.258  Sum_probs=175.3

Q ss_pred             ccccccceEEEeEE--EEEeeeehhhhHhh-----------------------------eeeEEEEEecC--CeeEEEEe
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITFLCFLIA-----------------------------ISSLLVYKHRS--SKKLLVYE  489 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~~~~avk-----------------------------i~~l~~~~~~~--~~~~lV~e  489 (702)
                      +.++..+.||+|++  ||++......+|+|                             |+++++++.+.  +..++|||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   89 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH   89 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeec
Confidence            44556678999987  88887766666666                             78888888876  88999999


Q ss_pred             cCCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCC--eEecCCCCCcEEEeCCCcEEEecccceeecCCC
Q 038002          490 FMSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQ--IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  566 (702)
                      |+++|+|.+++..... .+++.++..++.||+.||+|||++   +  |+||||||+||+++.++.++|.|||++..... 
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-  165 (271)
T 3kmu_A           90 WMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-  165 (271)
T ss_dssp             CCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-
T ss_pred             ccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeecc-
Confidence            9999999999987654 489999999999999999999998   8  99999999999999999999999988764322 


Q ss_pred             CCceeeceeccccccCcccccCCCCCc---cccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccc
Q 038002          567 QTGIVAGVRGSRGYMAPEWQNSGLITV---KSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV  643 (702)
Q Consensus       567 ~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  643 (702)
                           ....||+.|+|||.+.+..++.   ++||||||+++|||++|+.||.....   . ..   ....... ..    
T Consensus       166 -----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~-~~---~~~~~~~-~~----  228 (271)
T 3kmu_A          166 -----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN---M-EI---GMKVALE-GL----  228 (271)
T ss_dssp             -----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH---H-HH---HHHHHHS-CC----
T ss_pred             -----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh---H-HH---HHHHHhc-CC----
Confidence                 2345799999999987655444   89999999999999999999964311   1 10   1111111 11    


Q ss_pred             ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          644 EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       644 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ....+...+..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus       229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          229 RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            11223344567899999999999999999999999998764

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.97  E-value=6.8e-32  Score=288.83  Aligned_cols=214  Identities=20%  Similarity=0.184  Sum_probs=174.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +.++..+.||+|++  ||++....  ..||+|                              |++++..+++++..|+||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            44556678899887  88776542  455555                              788889999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.....  
T Consensus       121 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~--  194 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--  194 (350)
T ss_dssp             ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred             cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence            9999999999998754 689999999999999999999999   9999999999999999999999999999876432  


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                        .....||+.|+|||++.+..++.++||||||+++|||++|+.||....   ...     ....+..+..      ..+
T Consensus       195 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~---~~~-----~~~~i~~~~~------~~p  258 (350)
T 1rdq_E          195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ---PIQ-----IYEKIVSGKV------RFP  258 (350)
T ss_dssp             --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHH-----HHHHHHHCCC------CCC
T ss_pred             --cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC---HHH-----HHHHHHcCCC------CCC
Confidence              234579999999999999999999999999999999999999996431   111     1111222211      122


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPS-----MKNVIL  678 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~  678 (702)
                      ...+..+.+++.+||+.||++||+     ++||++
T Consensus       259 ~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          259 SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence            334567899999999999999998     888875

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.97  E-value=1.7e-32  Score=290.90  Aligned_cols=192  Identities=24%  Similarity=0.326  Sum_probs=155.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++.+++..++||||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        76 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~  151 (326)
T 2y0a_A           76 VITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN  151 (326)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSS
T ss_pred             CCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCC
Confidence            7888899999999999999999999999997654 789999999999999999999999   999999999999998877


Q ss_pred             ----cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          551 ----RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       551 ----~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                          .+||+|||++........  .....||+.|+|||++.+..++.++||||||+++|+|++|..||.....   ....
T Consensus       152 ~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~  226 (326)
T 2y0a_A          152 VPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK---QETL  226 (326)
T ss_dssp             SSSCCEEECCCTTCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH---HHHH
T ss_pred             CCCCCEEEEECCCCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH---HHHH
Confidence                899999999987643322  3345799999999999988999999999999999999999999964311   1111


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..     ......  ..........+..+.+++.+||+.||++|||++|+++
T Consensus       227 ~~-----~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          227 AN-----VSAVNY--EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HH-----HHHTCC--CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HH-----HHhcCC--CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            11     111100  0011111223567889999999999999999999987

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.97  E-value=2.8e-32  Score=295.64  Aligned_cols=222  Identities=21%  Similarity=0.217  Sum_probs=176.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      +.+...+.||+|++  ||++....  ..+|+|                           |+++++++.+++..++||||+
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~  130 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  130 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence            44566678899877  88776543  445554                           888999999999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC--CCcEEEecccceeecCCCCCc
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD--SWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      ++|+|.+++......+++.++..++.||+.||+|||++   +|+||||||+|||++.  ++.+||+|||++........ 
T Consensus       131 ~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~-  206 (387)
T 1kob_A          131 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI-  206 (387)
T ss_dssp             CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC-
T ss_pred             CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCcc-
Confidence            99999999987766799999999999999999999999   9999999999999974  57799999999987654332 


Q ss_pred             eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCH
Q 038002          570 IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK  649 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (702)
                       .....||+.|+|||++.+..++.++|||||||++|||++|..||....   ....+.     .......  ........
T Consensus       207 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~---~~~~~~-----~i~~~~~--~~~~~~~~  275 (387)
T 1kob_A          207 -VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED---DLETLQ-----NVKRCDW--EFDEDAFS  275 (387)
T ss_dssp             -EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS---HHHHHH-----HHHHCCC--CCCSSTTT
T ss_pred             -eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC---HHHHHH-----HHHhCCC--CCCccccc
Confidence             334579999999999999899999999999999999999999996431   111111     1111111  01112223


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          650 ITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ..+..+.+++.+||+.||++|||++|+++.
T Consensus       276 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          276 SVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            346688999999999999999999999874

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.97  E-value=1e-32  Score=287.96  Aligned_cols=235  Identities=21%  Similarity=0.242  Sum_probs=174.6

Q ss_pred             cccccccceEEEeEE--EEEeee------ehhhhHhh---------------------------eeeEEEEEec--CCee
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSI------TFLCFLIA---------------------------ISSLLVYKHR--SSKK  484 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~------~~~~~avk---------------------------i~~l~~~~~~--~~~~  484 (702)
                      .+.++..++||+|++  ||++..      ....||+|                           |+++++++..  ....
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            345566788899887  777763      12556666                           7778777644  4668


Q ss_pred             EEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecC
Q 038002          485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLM  564 (702)
Q Consensus       485 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~  564 (702)
                      ++||||+++++|.+++......+++.++..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++....
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~  165 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP  165 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred             EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence            999999999999999988766799999999999999999999999   99999999999999999999999999998764


Q ss_pred             CCCCc--eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCC--------cchhhhHHHHHHhh
Q 038002          565 PNQTG--IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVST--------ADEVLLSTWVYNCF  634 (702)
Q Consensus       565 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--------~~~~~~~~~~~~~~  634 (702)
                      .....  ......++..|+|||.+.+..++.++||||||+++|||++|..|+......        ..............
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (295)
T 3ugc_A          166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL  245 (295)
T ss_dssp             ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred             CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence            43321  122344677899999999889999999999999999999999998542100        00000000111111


Q ss_pred             hccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       635 ~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ....     ....+...++.+.+++.+||+.||++|||++|++++|+.+.
T Consensus       246 ~~~~-----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~  290 (295)
T 3ugc_A          246 KNNG-----RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  290 (295)
T ss_dssp             HTTC-----CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hccC-----cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            1111     11223345678999999999999999999999999998753

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=1.2e-32  Score=293.75  Aligned_cols=226  Identities=19%  Similarity=0.216  Sum_probs=177.5

Q ss_pred             CcccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          441 GNDKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       441 ~~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      +.+.+...+.||+|++  ||++....  ..+|+|                        |+++++++++++..|+||||++
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~   99 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMK   99 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCC
Confidence            3455666788999987  88877653  567776                        8889999999999999999999


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC----CcEEEecccceeecCCCCC
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS----WRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~----~~~kl~Dfg~a~~~~~~~~  568 (702)
                      +|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||+.++    +.+||+|||++........
T Consensus       100 gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~  175 (342)
T 2qr7_A          100 GGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG  175 (342)
T ss_dssp             SCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence            999999997764 699999999999999999999999   99999999999998443    3599999999987644332


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                       ......||+.|+|||++.+..++.++||||||+++|||++|..||..........     ....+..+...  ......
T Consensus       176 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~-----~~~~i~~~~~~--~~~~~~  247 (342)
T 2qr7_A          176 -LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEE-----ILARIGSGKFS--LSGGYW  247 (342)
T ss_dssp             -CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHH-----HHHHHHHCCCC--CCSTTT
T ss_pred             -ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHH-----HHHHHccCCcc--cCcccc
Confidence             2344678999999999988888999999999999999999999997542221111     11112222211  111122


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ...++.+.+++.+||+.||++||+++|+++
T Consensus       248 ~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          248 NSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            345678899999999999999999999986

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.97  E-value=1.4e-32  Score=291.67  Aligned_cols=225  Identities=23%  Similarity=0.289  Sum_probs=175.1

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hh----hHhh----------------------------eeeEEEEEecCCeeEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LC----FLIA----------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~----~avk----------------------------i~~l~~~~~~~~~~~l  486 (702)
                      ..++..+.||+|++  ||++....  ..    ||+|                            |+++++++.++. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            45566788999987  88876532  22    3443                            788888887654 789


Q ss_pred             EEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCC
Q 038002          487 VYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  566 (702)
                      |+||+++|+|.+++......+++..++.++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~  170 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence            9999999999999988777899999999999999999999999   9999999999999999999999999999877544


Q ss_pred             CCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          567 QTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       567 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      ... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......  .  ....    ...+.     .
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~--~~~~----~~~~~-----~  237 (327)
T 3poz_A          171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--E--ISSI----LEKGE-----R  237 (327)
T ss_dssp             CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--G--HHHH----HHTTC-----C
T ss_pred             cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--H--HHHH----HHcCC-----C
Confidence            322 2233456889999999999999999999999999999999 99999754211  1  1111    11111     0


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ...+......+.+++.+||+.||++||+++|++++|+.+.
T Consensus       238 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          238 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            1122334567889999999999999999999999998754

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.97  E-value=1e-32  Score=294.23  Aligned_cols=227  Identities=22%  Similarity=0.273  Sum_probs=179.6

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-------hhhHhh----------------------------eeeEEEEEecCCeeE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-------LCFLIA----------------------------ISSLLVYKHRSSKKL  485 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-------~~~avk----------------------------i~~l~~~~~~~~~~~  485 (702)
                      +.++..+.||+|++  ||++....       ..||+|                            |+++++++.+++..+
T Consensus        47 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  126 (343)
T 1luf_A           47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC  126 (343)
T ss_dssp             GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceE
Confidence            34555678888887  88877642       445655                            888999999999999


Q ss_pred             EEEecCCCCCHHHHhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCC
Q 038002          486 LVYEFMSKGSLADLLFNLE-----------------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR  542 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~  542 (702)
                      +||||+++++|.+++....                       ..+++.+++.++.||++||+|||++   +|+||||||+
T Consensus       127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~  203 (343)
T 1luf_A          127 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATR  203 (343)
T ss_dssp             EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred             EEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcc
Confidence            9999999999999997642                       4688999999999999999999999   9999999999


Q ss_pred             cEEEeCCCcEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCC
Q 038002          543 NILIDDSWRAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVST  620 (702)
Q Consensus       543 NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~  620 (702)
                      ||+++.++.+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |..||....  
T Consensus       204 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--  281 (343)
T 1luf_A          204 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA--  281 (343)
T ss_dssp             GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--
T ss_pred             eEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC--
Confidence            99999999999999999986543221 12234567899999999988889999999999999999999 999996431  


Q ss_pred             cchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          621 ADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ..  .    .......+...     ..+...+..+.+++.+||+.||++||++++++++|+++.+
T Consensus       282 ~~--~----~~~~~~~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          282 HE--E----VIYYVRDGNIL-----ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             HH--H----HHHHHHTTCCC-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             hH--H----HHHHHhCCCcC-----CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence            11  1    11111222211     1223345678999999999999999999999999998764

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.97  E-value=1.6e-32  Score=291.90  Aligned_cols=216  Identities=21%  Similarity=0.221  Sum_probs=173.9

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      ..++..+.||+|++  ||++....  ..||+|                              |+++++++.+++..++||
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            45666788999987  88887633  556665                              788999999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+ +|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++....... 
T Consensus        89 E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-  162 (336)
T 3h4j_B           89 EYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-  162 (336)
T ss_dssp             CCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB-
T ss_pred             ECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc-
Confidence            999 789999887654 799999999999999999999999   99999999999999999999999999998654332 


Q ss_pred             ceeeceeccccccCcccccCCCC-CccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLI-TVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                       ......||+.|+|||.+.+..+ +.++||||||+++|+|++|+.||..........        .....      ....
T Consensus       163 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~--------~i~~~------~~~~  227 (336)
T 3h4j_B          163 -FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK--------KVNSC------VYVM  227 (336)
T ss_dssp             -TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC--------CCCSS------CCCC
T ss_pred             -ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH--------HHHcC------CCCC
Confidence             2344579999999999987765 789999999999999999999997542211000        00000      0112


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      +...+..+.+++.+||+.||.+|||++|+++.
T Consensus       228 p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          228 PDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            33345678899999999999999999999874

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.97  E-value=1.6e-32  Score=291.98  Aligned_cols=242  Identities=23%  Similarity=0.266  Sum_probs=176.8

Q ss_pred             cccccccceEEEeEE--EEEeeeehhhhHhh--------------------------eeeEEEEE-----ecCCeeEEEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITFLCFLIA--------------------------ISSLLVYK-----HRSSKKLLVY  488 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~~~~avk--------------------------i~~l~~~~-----~~~~~~~lV~  488 (702)
                      .+.++..+.||+|++  ||++......||+|                          |++++..+     ......++||
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~   91 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM   91 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEE
Confidence            345667789999988  99887766777777                          55555422     2344679999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcC------CCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC------EVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~------~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      ||+++|+|.+++....  .++..+..++.||++||+|||+++      ..+|+||||||+|||++.++.+||+|||++..
T Consensus        92 e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~  169 (336)
T 3g2f_A           92 EYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR  169 (336)
T ss_dssp             CCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             ecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceee
Confidence            9999999999997654  588999999999999999999862      22899999999999999999999999999987


Q ss_pred             cCCCCC-------ceeeceeccccccCcccccC-------CCCCccccccchhHhHHHhhhCCcCCcCCCCCcch-hhhH
Q 038002          563 LMPNQT-------GIVAGVRGSRGYMAPEWQNS-------GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE-VLLS  627 (702)
Q Consensus       563 ~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~-~~~~  627 (702)
                      +.....       .......||+.|+|||++.+       ..++.++||||||+++|||++|..||......... ....
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~  249 (336)
T 3g2f_A          170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQ  249 (336)
T ss_dssp             CSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTH
T ss_pred             cccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhh
Confidence            643221       11224568999999998876       45668999999999999999998877544222111 1000


Q ss_pred             ---------HHHHHhhhcccccccccc--ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          628 ---------TWVYNCFVAGEFNKLVEE--EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       628 ---------~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                               ...............+..  ......++.+.+++.+||+.||++|||++|++++|+++..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~  318 (336)
T 3g2f_A          250 TEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM  318 (336)
T ss_dssp             HHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence                     000001111111111111  1234567789999999999999999999999999998653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.97  E-value=1.3e-32  Score=291.66  Aligned_cols=225  Identities=21%  Similarity=0.275  Sum_probs=173.6

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hh----hHhh----------------------------eeeEEEEEecCCeeEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LC----FLIA----------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~----~avk----------------------------i~~l~~~~~~~~~~~l  486 (702)
                      ..++..+.||+|++  ||++....  ..    +++|                            |+++++++. ++..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            45566678888877  78776532  22    3433                            778888775 567899


Q ss_pred             EEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCC
Q 038002          487 VYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  566 (702)
                      ||||+++|+|.+++......+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  168 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD  168 (325)
T ss_dssp             EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred             EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence            9999999999999987766789999999999999999999999   9999999999999999999999999999876544


Q ss_pred             CCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          567 QTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       567 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      ... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.......    ...    ....+..     
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----~~~----~~~~~~~-----  235 (325)
T 3kex_A          169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE----VPD----LLEKGER-----  235 (325)
T ss_dssp             TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH----HHH----HHHTTCB-----
T ss_pred             cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH----HHH----HHHcCCC-----
Confidence            322 2344567889999999998899999999999999999999 999997542211    111    1111110     


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ...+......+.+++.+||+.||++||+++|+++.|+.+.
T Consensus       236 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~  275 (325)
T 3kex_A          236 LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA  275 (325)
T ss_dssp             CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred             CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            0111223446788999999999999999999999998754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=6.3e-33  Score=284.78  Aligned_cols=225  Identities=22%  Similarity=0.295  Sum_probs=177.7

Q ss_pred             cccccceEEEeEE--EEEeeeeh-hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCCC
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF-LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSKG  494 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~-~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~g  494 (702)
                      .++..+.||+|++  ||++.... ..+|+|                          |+++++++.+++..++||||++++
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   88 (267)
T 3t9t_A            9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHG   88 (267)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTC
T ss_pred             heeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCC
Confidence            4455667787776  77766533 445555                          888899999999999999999999


Q ss_pred             CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeece
Q 038002          495 SLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGV  574 (702)
Q Consensus       495 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  574 (702)
                      +|.+++......+++.++..++.|++.||+|||++   +|+|+||||+||+++.++.+||+|||++..............
T Consensus        89 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  165 (267)
T 3t9t_A           89 CLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT  165 (267)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTST
T ss_pred             cHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccccccccccc
Confidence            99999988766789999999999999999999999   999999999999999999999999999986543222222334


Q ss_pred             eccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHH
Q 038002          575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLE  653 (702)
Q Consensus       575 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  653 (702)
                      .+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....   . ..    ......+.     ....+...+.
T Consensus       166 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~-~~----~~~i~~~~-----~~~~~~~~~~  232 (267)
T 3t9t_A          166 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN---S-EV----VEDISTGF-----RLYKPRLAST  232 (267)
T ss_dssp             TCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---H-HH----HHHHHTTC-----CCCCCTTSCH
T ss_pred             cccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH---H-HH----HHHHhcCC-----cCCCCccCcH
Confidence            56788999999988889999999999999999999 8999964311   1 11    11111110     1111223456


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          654 RMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       654 ~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .+.+++.+||+.||++||++++++++|+++.
T Consensus       233 ~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (267)
T 3t9t_A          233 HVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  263 (267)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            7889999999999999999999999998764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.97  E-value=1e-32  Score=309.14  Aligned_cols=199  Identities=25%  Similarity=0.338  Sum_probs=162.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++++..++..++||||+++|+|.+++.... ..+++..++.++.||+.||+|||++   +|+||||||+|||++.+
T Consensus       278 iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~  354 (495)
T 1opk_A          278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGEN  354 (495)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGG
T ss_pred             EeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCC
Confidence            8899999999999999999999999999998643 3589999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.+||+|||+++..............+++.|+|||.+....++.++||||||+++|||++ |..||......  +  .. 
T Consensus       355 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~--~~-  429 (495)
T 1opk_A          355 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--Q--VY-  429 (495)
T ss_dssp             GCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G--HH-
T ss_pred             CcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--H--HH-
Confidence            999999999998765433222334456788999999988899999999999999999999 99999654211  1  11 


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                         .....+ .    ....+...++.+.++|.+||+.||++|||+++|+++|+.+.+
T Consensus       430 ---~~~~~~-~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          430 ---ELLEKD-Y----RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             ---HHHHTT-C----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             ---HHHHcC-C----CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence               111111 1    112233445678899999999999999999999999998753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.97  E-value=1.1e-31  Score=284.02  Aligned_cols=217  Identities=19%  Similarity=0.261  Sum_probs=173.0

Q ss_pred             cccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEecCCCC
Q 038002          446 NDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEFMSKG  494 (702)
Q Consensus       446 ~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~~~~g  494 (702)
                      ...++||+|++  ||++....  ..||||                           |+++++++..++..++||||++++
T Consensus        48 ~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  127 (321)
T 2c30_A           48 DSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGG  127 (321)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSC
T ss_pred             hccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCC
Confidence            33457888877  88887652  667776                           778889999999999999999999


Q ss_pred             CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeece
Q 038002          495 SLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGV  574 (702)
Q Consensus       495 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  574 (702)
                      +|.+++...  .+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++........ .....
T Consensus       128 ~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~~~~  201 (321)
T 2c30_A          128 ALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KRKSL  201 (321)
T ss_dssp             BHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CBCCC
T ss_pred             CHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc-ccccc
Confidence            999998653  689999999999999999999999   999999999999999999999999999987644322 23456


Q ss_pred             eccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHH
Q 038002          575 RGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLER  654 (702)
Q Consensus       575 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  654 (702)
                      .||+.|+|||++.+..++.++||||||+++|||++|+.||....    .....    ...........   ......+..
T Consensus       202 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~----~~~~~----~~~~~~~~~~~---~~~~~~~~~  270 (321)
T 2c30_A          202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS----PVQAM----KRLRDSPPPKL---KNSHKVSPV  270 (321)
T ss_dssp             CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHH----HHHHHSSCCCC---TTGGGSCHH
T ss_pred             cCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHH----HHHhcCCCCCc---CccccCCHH
Confidence            79999999999998899999999999999999999999996431    11111    11111111111   111233567


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          655 MVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       655 l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      +.+++.+||+.||++|||++|+++.
T Consensus       271 l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          271 LRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcC
Confidence            8899999999999999999999874

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.97  E-value=2.2e-32  Score=292.95  Aligned_cols=222  Identities=19%  Similarity=0.169  Sum_probs=173.3

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------------eeeEEEEEecCCeeE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------------ISSLLVYKHRSSKKL  485 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------------i~~l~~~~~~~~~~~  485 (702)
                      .+.++..+.||+|++  ||++....  ..||+|                                |+++++++.+++..|
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            455667788999987  88776542  445554                                788899999999999


Q ss_pred             EEEecCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCc---EEEecccc
Q 038002          486 LVYEFMSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWR---AKISDFGL  559 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~---~kl~Dfg~  559 (702)
                      +||||+++++|.+++...   ...+++.++..++.||+.||+|||++   +|+||||||+|||++.++.   +||+|||+
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            999999999999887643   23489999999999999999999999   9999999999999976654   99999999


Q ss_pred             eeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccc
Q 038002          560 AKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEF  639 (702)
Q Consensus       560 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  639 (702)
                      +........ ......||+.|+|||++.+..++.++||||||+++|+|++|+.||...    ...     .......+..
T Consensus       180 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~----~~~-----~~~~i~~~~~  249 (351)
T 3c0i_A          180 AIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT----KER-----LFEGIIKGKY  249 (351)
T ss_dssp             CEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS----HHH-----HHHHHHHTCC
T ss_pred             eeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc----HHH-----HHHHHHcCCC
Confidence            987654322 234457999999999999889999999999999999999999999643    111     1111111111


Q ss_pred             ccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          640 NKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       640 ~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..  ........+..+.+++.+||+.||++|||++|+++
T Consensus       250 ~~--~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          250 KM--NPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             CC--CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CC--CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            10  00011123567889999999999999999999986

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.97  E-value=6.9e-33  Score=290.02  Aligned_cols=232  Identities=22%  Similarity=0.286  Sum_probs=178.2

Q ss_pred             cccccceEEEeEE--EEEeee------ehhhhHhh----------------------------eeeEEEEEecC--CeeE
Q 038002          444 KVNDKRKLLTVLA--GCLGSI------TFLCFLIA----------------------------ISSLLVYKHRS--SKKL  485 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~------~~~~~avk----------------------------i~~l~~~~~~~--~~~~  485 (702)
                      .++..+.||+|++  ||++..      ....||+|                            |+++++++..+  +..+
T Consensus        22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  101 (302)
T 4e5w_A           22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK  101 (302)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred             hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence            3456678999987  887762      22556666                            77777777765  7789


Q ss_pred             EEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCC
Q 038002          486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP  565 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~  565 (702)
                      +||||+++++|.+++......+++.++..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++.....
T Consensus       102 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  178 (302)
T 4e5w_A          102 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIET  178 (302)
T ss_dssp             EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred             EEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccccC
Confidence            99999999999999977666799999999999999999999999   999999999999999999999999999988754


Q ss_pred             CCCc--eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCC--------CcchhhhHHHHHHhhh
Q 038002          566 NQTG--IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVS--------TADEVLLSTWVYNCFV  635 (702)
Q Consensus       566 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--------~~~~~~~~~~~~~~~~  635 (702)
                      ....  ......+|..|+|||.+.+..++.++||||||+++|||++|..|+.....        ....... ........
T Consensus       179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  257 (302)
T 4e5w_A          179 DKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTV-TRLVNTLK  257 (302)
T ss_dssp             TCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHH-HHHHHHHH
T ss_pred             CCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCH-HHHHHHHh
Confidence            4331  22345678889999999888899999999999999999999998743210        0000000 00111111


Q ss_pred             ccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          636 AGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .+.     ....+...++.+.+++.+||+.||++|||+++++++|+.+.
T Consensus       258 ~~~-----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          258 EGK-----RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             TTC-----CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccC-----CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            111     11223345678999999999999999999999999998753

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.97  E-value=4.6e-32  Score=288.99  Aligned_cols=234  Identities=21%  Similarity=0.210  Sum_probs=179.8

Q ss_pred             ccccccceEEEeEE--EEEeeeehhhhHhh--------------------------eeeEEEEEecCC----eeEEEEec
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITFLCFLIA--------------------------ISSLLVYKHRSS----KKLLVYEF  490 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~~~~avk--------------------------i~~l~~~~~~~~----~~~lV~e~  490 (702)
                      +.+...+.||+|++  ||++......||+|                          |+++++++...+    ..++||||
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  121 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY  121 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECC
T ss_pred             ccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEee
Confidence            34555678899877  88887766667776                          777888877765    89999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhh--------hcCCCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLH--------DECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH--------~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      +++|+|.+++...  .+++.+++.++.|++.||+|||        +.   +|+||||||+||+++.++.+||+|||++..
T Consensus       122 ~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~  196 (342)
T 1b6c_B          122 HEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLGLAVR  196 (342)
T ss_dssp             CTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             cCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEEECCCcee
Confidence            9999999999764  5899999999999999999999        77   999999999999999999999999999987


Q ss_pred             cCCCCCc---eeeceeccccccCcccccCC------CCCccccccchhHhHHHhhhC----------CcCCcCCCCCcch
Q 038002          563 LMPNQTG---IVAGVRGSRGYMAPEWQNSG------LITVKSDVYSFGVVLLEIICC----------RSNFEVNVSTADE  623 (702)
Q Consensus       563 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvil~elltG----------~~Pf~~~~~~~~~  623 (702)
                      .......   ......||+.|+|||.+.+.      .++.++||||||+++|||++|          +.||.........
T Consensus       197 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~  276 (342)
T 1b6c_B          197 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  276 (342)
T ss_dssp             EETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             ccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCccc
Confidence            6544322   12345789999999988765      234789999999999999999          7787654222111


Q ss_pred             hhhHHHHHHhhhcccccccccc-ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          624 VLLSTWVYNCFVAGEFNKLVEE-EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       624 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .  .. .............+.. .......+.+.+++.+||+.||++|||++||+++|+.+.
T Consensus       277 ~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~  335 (342)
T 1b6c_B          277 V--EE-MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  335 (342)
T ss_dssp             H--HH-HHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             H--HH-HHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            1  11 1111112111111111 123467789999999999999999999999999998764

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.8e-32  Score=292.68  Aligned_cols=196  Identities=23%  Similarity=0.264  Sum_probs=156.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..+..++..++||||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus       121 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~  196 (355)
T 1vzo_A          121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNG  196 (355)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTS
T ss_pred             eeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence            7777888888999999999999999999998654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC--CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS--GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      .+||+|||+++.+............||+.|+|||++.+  ..++.++||||||+++|||++|+.||...........+..
T Consensus       197 ~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~  276 (355)
T 1vzo_A          197 HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR  276 (355)
T ss_dssp             CEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHH
T ss_pred             cEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHH
Confidence            99999999998765444333445679999999999875  3578999999999999999999999975432222111111


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVILML  680 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~~L  680 (702)
                      .    ....      ....+......+.+++.+||+.||++||     +++|+++..
T Consensus       277 ~----~~~~------~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          277 R----ILKS------EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             H----HHHC------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred             H----Hhcc------CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence            1    1111      1122334456788999999999999999     999998754

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.97  E-value=5.1e-32  Score=289.90  Aligned_cols=222  Identities=20%  Similarity=0.217  Sum_probs=165.8

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      +.++..+.||+|++  ||++....  ..||+|                         |+++++++.+++..++||||+++
T Consensus        53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  132 (349)
T 2w4o_A           53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG  132 (349)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCC
Confidence            34555677888876  77776653  456666                         78888999999999999999999


Q ss_pred             CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC---CCcEEEecccceeecCCCCCce
Q 038002          494 GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD---SWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       494 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      ++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.   ++.+||+|||++.......  .
T Consensus       133 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~  206 (349)
T 2w4o_A          133 GELFDRIVEKG-YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV--L  206 (349)
T ss_dssp             CBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCccc--c
Confidence            99999997654 689999999999999999999999   9999999999999975   8899999999998654322  2


Q ss_pred             eeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHH
Q 038002          571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI  650 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  650 (702)
                      .....||+.|+|||++.+..++.++||||||+++|||++|+.||......  ...     ...+......  ........
T Consensus       207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~-----~~~i~~~~~~--~~~~~~~~  277 (349)
T 2w4o_A          207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD--QFM-----FRRILNCEYY--FISPWWDE  277 (349)
T ss_dssp             ------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH--HHH-----HHHHHTTCCC--CCTTTTTT
T ss_pred             cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc--HHH-----HHHHHhCCCc--cCCchhhh
Confidence            33467899999999999889999999999999999999999999644211  111     1111111111  01111233


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          651 TLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       651 ~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .+..+.+++.+||+.||++|||++|+++.
T Consensus       278 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          278 VSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            45678999999999999999999999873

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=3.4e-32  Score=295.72  Aligned_cols=235  Identities=16%  Similarity=0.104  Sum_probs=174.4

Q ss_pred             cccccccceEEEe--EE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEE
Q 038002          442 NDKVNDKRKLLTV--LA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       442 ~~~~~~~~~l~~g--~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~l  486 (702)
                      ...++..+.||+|  ++  ||++....  ..||+|                             |+++++++.+++..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            3556677899999  65  88887653  566766                             8889999999999999


Q ss_pred             EEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCC
Q 038002          487 VYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP  565 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~  565 (702)
                      ||||+++|+|.+++.... ..+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||.+.....
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~  180 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS  180 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred             EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence            999999999999997652 3689999999999999999999999   999999999999999999999999999875422


Q ss_pred             CCC------ceeeceeccccccCcccccC--CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhc-
Q 038002          566 NQT------GIVAGVRGSRGYMAPEWQNS--GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVA-  636 (702)
Q Consensus       566 ~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~-  636 (702)
                      ...      .......||+.|+|||++.+  ..++.++|||||||++|||++|+.||...................... 
T Consensus       181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  260 (389)
T 3gni_B          181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT  260 (389)
T ss_dssp             TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred             ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence            211      11223468999999999877  678999999999999999999999997542221111000000000000 


Q ss_pred             -----c--------------------------ccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          637 -----G--------------------------EFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       637 -----~--------------------------~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                           .                          .................+.+++.+||+.||++|||++|+++.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence                 0                          000000001233345679999999999999999999999864

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.97  E-value=9.2e-33  Score=306.37  Aligned_cols=226  Identities=24%  Similarity=0.361  Sum_probs=176.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      +.++..++||+|+|  ||++.... ..||||                          |+++++++. ++..++||||+++
T Consensus       188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~  266 (454)
T 1qcf_A          188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAK  266 (454)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTT
T ss_pred             HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCC
Confidence            34455677888877  78777653 456666                          777887775 6789999999999


Q ss_pred             CCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceee
Q 038002          494 GSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA  572 (702)
Q Consensus       494 gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  572 (702)
                      |+|.+++.... ..+++.+++.++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++...........
T Consensus       267 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~  343 (454)
T 1qcf_A          267 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE  343 (454)
T ss_dssp             CBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTC
T ss_pred             CcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccC
Confidence            99999997543 2588899999999999999999999   9999999999999999999999999999876432222222


Q ss_pred             ceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHH
Q 038002          573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT  651 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  651 (702)
                      ...+++.|+|||.+....++.++||||||+++|||++ |+.||....  .  ....    .....+.     ....+...
T Consensus       344 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~--~--~~~~----~~i~~~~-----~~~~~~~~  410 (454)
T 1qcf_A          344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--N--PEVI----RALERGY-----RMPRPENC  410 (454)
T ss_dssp             SSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--H--HHHH----HHHHHTC-----CCCCCTTS
T ss_pred             CCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC--H--HHHH----HHHHcCC-----CCCCCCCC
Confidence            3446788999999988899999999999999999999 999996431  1  1111    1111111     11122334


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          652 LERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       652 ~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ++.+.++|.+||+.||++|||+++|+++|+.+..
T Consensus       411 ~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          411 PEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence            5678999999999999999999999999999754

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.97  E-value=2.3e-32  Score=293.95  Aligned_cols=222  Identities=19%  Similarity=0.221  Sum_probs=174.8

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      .+.+...+.||+|++  ||++....  ..+|+|                             |+++++++.+++..|+||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            345666788999987  88776543  455655                             888899999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC---cEEEecccceeecCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW---RAKISDFGLAKLLMP  565 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~---~~kl~Dfg~a~~~~~  565 (702)
                      ||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++   .+||+|||++.....
T Consensus       108 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~  183 (362)
T 2bdw_A          108 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  183 (362)
T ss_dssp             CCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred             ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence            9999999999997654 689999999999999999999999   999999999999997654   599999999987643


Q ss_pred             CCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccc
Q 038002          566 NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE  645 (702)
Q Consensus       566 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  645 (702)
                      ..  ......||+.|+|||++.+..++.++|||||||++|+|++|..||....    ...    ....+..+....  ..
T Consensus       184 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~----~~~----~~~~i~~~~~~~--~~  251 (362)
T 2bdw_A          184 SE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED----QHR----LYAQIKAGAYDY--PS  251 (362)
T ss_dssp             CC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHH----HHHHHHHTCCCC--CT
T ss_pred             Cc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC----HHH----HHHHHHhCCCCC--Cc
Confidence            32  2334679999999999998899999999999999999999999996431    111    111111111110  01


Q ss_pred             ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          646 EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       646 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ......+..+.+++.+||+.||++||+++|+++.
T Consensus       252 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          252 PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            1112345678899999999999999999998864

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.97  E-value=3e-32  Score=286.35  Aligned_cols=224  Identities=25%  Similarity=0.312  Sum_probs=167.0

Q ss_pred             cccccceEEEeEE--EEEeeeehhhhHhh-------------------------eeeEEEEEecCCeeEEEEecCCCCCH
Q 038002          444 KVNDKRKLLTVLA--GCLGSITFLCFLIA-------------------------ISSLLVYKHRSSKKLLVYEFMSKGSL  496 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~~~~avk-------------------------i~~l~~~~~~~~~~~lV~e~~~~gsL  496 (702)
                      .++..+.||+|++  ||++......||+|                         |+++++++.  +..++||||+++++|
T Consensus         9 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L   86 (307)
T 2eva_A            9 EIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSL   86 (307)
T ss_dssp             GEEEEEEEECCSSSEEEEEEETTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBH
T ss_pred             HeeeeeEeecCCCceEEEEEECCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCH
Confidence            4455677888887  88877666666666                         777777665  458999999999999


Q ss_pred             HHHhhcCCC--CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCc-EEEecccceeecCCCCCceeec
Q 038002          497 ADLLFNLET--RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWR-AKISDFGLAKLLMPNQTGIVAG  573 (702)
Q Consensus       497 ~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~-~kl~Dfg~a~~~~~~~~~~~~~  573 (702)
                      .+++.....  .+++.+++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++......    ...
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----~~~  162 (307)
T 2eva_A           87 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MTN  162 (307)
T ss_dssp             HHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------------
T ss_pred             HHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc----ccc
Confidence            999986543  3688999999999999999999922129999999999999998887 799999999765322    223


Q ss_pred             eeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHH
Q 038002          574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLE  653 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  653 (702)
                      ..||+.|+|||.+.+..++.++||||||+++|||++|+.||.........  .   ... ...+..     .......+.
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--~---~~~-~~~~~~-----~~~~~~~~~  231 (307)
T 2eva_A          163 NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR--I---MWA-VHNGTR-----PPLIKNLPK  231 (307)
T ss_dssp             --CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH--H---HHH-HHTTCC-----CCCBTTCCH
T ss_pred             CCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH--H---HHH-HhcCCC-----CCcccccCH
Confidence            46899999999999889999999999999999999999999754222111  1   011 111111     111223356


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          654 RMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       654 ~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .+.+++.+||+.||++|||+++++++|+.+.
T Consensus       232 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  262 (307)
T 2eva_A          232 PIESLMTRCWSKDPSQRPSMEEIVKIMTHLM  262 (307)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            7889999999999999999999999998754

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.97  E-value=2.1e-32  Score=303.34  Aligned_cols=228  Identities=27%  Similarity=0.342  Sum_probs=172.8

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      +.++..++||+|+|  ||++.... ..||||                          |+++++++.+ +..++||||+++
T Consensus       184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~  262 (452)
T 1fmk_A          184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK  262 (452)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred             hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcC
Confidence            34455667888877  77776654 446666                          7888887765 778999999999


Q ss_pred             CCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceee
Q 038002          494 GSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA  572 (702)
Q Consensus       494 gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  572 (702)
                      |+|.+++... ...+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++...........
T Consensus       263 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  339 (452)
T 1fmk_A          263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ  339 (452)
T ss_dssp             CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceeccc
Confidence            9999999753 23589999999999999999999999   9999999999999999999999999999876443322233


Q ss_pred             ceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHH
Q 038002          573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT  651 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  651 (702)
                      ...++..|+|||.+....++.++||||||+++|||++ |+.||.....  .+      .......+.     ....+...
T Consensus       340 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~------~~~~i~~~~-----~~~~~~~~  406 (452)
T 1fmk_A          340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--RE------VLDQVERGY-----RMPCPPEC  406 (452)
T ss_dssp             ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HH------HHHHHHTTC-----CCCCCTTS
T ss_pred             CCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--HH------HHHHHHcCC-----CCCCCCCC
Confidence            4457789999999988899999999999999999999 9999964311  11      111111111     11123344


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCC
Q 038002          652 LERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP  687 (702)
Q Consensus       652 ~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~  687 (702)
                      ++.+.+++.+||+.||++|||+++|+++|+.+..-.
T Consensus       407 ~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          407 PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  442 (452)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence            668899999999999999999999999999976443

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.97  E-value=6.7e-32  Score=290.85  Aligned_cols=221  Identities=15%  Similarity=0.054  Sum_probs=175.6

Q ss_pred             ccccccceEEEeEE--EEEee-----e--ehhhhHhh---------------------------eeeEEEEEecCCeeEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGS-----I--TFLCFLIA---------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~-----~--~~~~~avk---------------------------i~~l~~~~~~~~~~~l  486 (702)
                      +.+...+.||+|++  ||++.     .  ....||+|                           |++++..+..++..++
T Consensus        65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~l  144 (365)
T 3e7e_A           65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVL  144 (365)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEE
T ss_pred             EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEE
Confidence            44556678999987  88883     1  22566666                           7788899999999999


Q ss_pred             EEecCCCCCHHHHhhc----CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC-----------CCc
Q 038002          487 VYEFMSKGSLADLLFN----LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD-----------SWR  551 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~-----------~~~  551 (702)
                      ||||+++|+|.+++..    ....+++.+++.++.||+.||+|||++   +|+||||||+|||++.           ++.
T Consensus       145 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~~~  221 (365)
T 3e7e_A          145 VGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAG  221 (365)
T ss_dssp             EECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------CTT
T ss_pred             EEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccccCC
Confidence            9999999999999974    334699999999999999999999999   9999999999999988           899


Q ss_pred             EEEecccceeecCCC-CCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          552 AKISDFGLAKLLMPN-QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       552 ~kl~Dfg~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      +||+|||+++.+... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.........       
T Consensus       222 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-------  294 (365)
T 3e7e_A          222 LALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK-------  294 (365)
T ss_dssp             EEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE-------
T ss_pred             EEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee-------
Confidence            999999999865422 223345567999999999999999999999999999999999999999643221100       


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHhCCc
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLR-PSMKNVILMLEGTM  684 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~R-Pt~~evl~~Le~~~  684 (702)
                              ....+...   ...+.+.+++..||+.+|.+| |+++++.+.|+...
T Consensus       295 --------~~~~~~~~---~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l  338 (365)
T 3e7e_A          295 --------PEGLFRRL---PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF  338 (365)
T ss_dssp             --------ECSCCTTC---SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred             --------echhcccc---CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence                    00111111   124567778888999999999 67888888887643

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.97  E-value=2.2e-32  Score=287.58  Aligned_cols=199  Identities=25%  Similarity=0.371  Sum_probs=162.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCC-----------------CCCHHHHHHHHHHHHHHHHhhhhcCCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLET-----------------RPLWRDRVRIALDVARGLLYLHDECEVQ  533 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-----------------~~~~~~~~~i~~qi~~aL~~LH~~~~~~  533 (702)
                      |+++++++..++..++||||+++|+|.+++.....                 .+++.+++.++.||+.||+|||++   +
T Consensus        89 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~  165 (313)
T 1t46_A           89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---N  165 (313)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred             eeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---C
Confidence            88889999999999999999999999999986542                 388999999999999999999999   9


Q ss_pred             eEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CC
Q 038002          534 IIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CR  611 (702)
Q Consensus       534 ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~  611 (702)
                      |+||||||+||+++.++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |+
T Consensus       166 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  245 (313)
T 1t46_A          166 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS  245 (313)
T ss_dssp             CCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             eecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999999876544332 2234567889999999988899999999999999999999 99


Q ss_pred             cCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          612 SNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       612 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .||.......   ........    . .    ....+...+..+.+++.+||+.||++|||++|++++|+++.
T Consensus       246 ~p~~~~~~~~---~~~~~~~~----~-~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  306 (313)
T 1t46_A          246 SPYPGMPVDS---KFYKMIKE----G-F----RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (313)
T ss_dssp             CSSTTCCSSH---HHHHHHHH----T-C----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCcccchh---HHHHHhcc----C-C----CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            9997542211   11111111    1 1    11112234567899999999999999999999999998753

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.97  E-value=3.6e-32  Score=282.87  Aligned_cols=225  Identities=20%  Similarity=0.222  Sum_probs=166.3

Q ss_pred             ccccceEEEeEE--EEEeeeeh-hhhHhh-----------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          445 VNDKRKLLTVLA--GCLGSITF-LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~-~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      ++..+.||+|++  ||++.... ..+|+|                             |+++++++.+++..++||||++
T Consensus         4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   83 (288)
T 1ob3_A            4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD   83 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC
Confidence            445567777766  77665532 445554                             8889999999999999999998


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceee
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA  572 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  572 (702)
                      + +|.+++......+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++........ ...
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~  158 (288)
T 1ob3_A           84 Q-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-KYT  158 (288)
T ss_dssp             E-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred             C-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-ccc
Confidence            6 99999987766799999999999999999999999   999999999999999999999999999987643221 223


Q ss_pred             ceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhc---cccccc-----c
Q 038002          573 GVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVA---GEFNKL-----V  643 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~  643 (702)
                      ...+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||......   ..+.. .......   ..+...     .
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~  234 (288)
T 1ob3_A          159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA---DQLMR-IFRILGTPNSKNWPNVTELPKY  234 (288)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHH-HHHHHCCCCTTTSTTGGGSTTC
T ss_pred             cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHH-HHHHHCCCChhhchhhhccccc
Confidence            4568999999998865 46899999999999999999999999754211   11111 1110000   000000     0


Q ss_pred             c-----------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          644 E-----------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       644 ~-----------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      +           ........+.+.+++.+||+.||++|||++|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            0           0111234567889999999999999999999986

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.97  E-value=1.4e-32  Score=289.35  Aligned_cols=229  Identities=20%  Similarity=0.221  Sum_probs=167.0

Q ss_pred             CcccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCC----
Q 038002          441 GNDKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSS----  482 (702)
Q Consensus       441 ~~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~----  482 (702)
                      ..+.++..+.||+|++  ||++....  ..||+|                              |+++++++....    
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~   89 (311)
T 3ork_A           10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   89 (311)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred             ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence            4566777889999987  88887533  566666                              677777666544    


Q ss_pred             eeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          483 KKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       483 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      ..|+||||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++..
T Consensus        90 ~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~  165 (311)
T 3ork_A           90 LPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA  165 (311)
T ss_dssp             EEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred             ccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence            3499999999999999997654 689999999999999999999999   999999999999999999999999999987


Q ss_pred             cCCCCC--ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccc
Q 038002          563 LMPNQT--GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFN  640 (702)
Q Consensus       563 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  640 (702)
                      ......  .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.....  ..     ............
T Consensus       166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--~~-----~~~~~~~~~~~~  238 (311)
T 3ork_A          166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP--VS-----VAYQHVREDPIP  238 (311)
T ss_dssp             ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HH-----HHHHHHHCCCCC
T ss_pred             ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--HH-----HHHHHhcCCCCC
Confidence            644322  122345689999999999998999999999999999999999999964411  11     111111111111


Q ss_pred             cccccccCHHHHHHHHHHHHHcccCCCCCCCCHHH-HHHHHhCC
Q 038002          641 KLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKN-VILMLEGT  683 (702)
Q Consensus       641 ~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~e-vl~~Le~~  683 (702)
                         ........+..+.+++.+||+.||++||++.+ +...|...
T Consensus       239 ---~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          239 ---PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             ---HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             ---cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence               01112234567889999999999999996555 44555554

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.97  E-value=3.4e-32  Score=286.26  Aligned_cols=226  Identities=25%  Similarity=0.323  Sum_probs=178.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-------hhhHhh----------------------------eeeEEEEEecCCeeE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-------LCFLIA----------------------------ISSLLVYKHRSSKKL  485 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-------~~~avk----------------------------i~~l~~~~~~~~~~~  485 (702)
                      ..+...+.||+|++  ||++....       ..||+|                            |+++++++.+++..+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  102 (314)
T 2ivs_A           23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL  102 (314)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred             hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE
Confidence            44555678888887  88776421       345554                            888899999999999


Q ss_pred             EEEecCCCCCHHHHhhcCCC-----------------------CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCC
Q 038002          486 LVYEFMSKGSLADLLFNLET-----------------------RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR  542 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~~~-----------------------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~  542 (702)
                      +||||+++++|.+++.....                       .+++.+++.++.||++||+|||++   +|+||||||+
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~  179 (314)
T 2ivs_A          103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAAR  179 (314)
T ss_dssp             EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGG
T ss_pred             EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchh
Confidence            99999999999999986532                       378999999999999999999999   9999999999


Q ss_pred             cEEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCC
Q 038002          543 NILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVST  620 (702)
Q Consensus       543 NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~  620 (702)
                      ||+++.++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus       180 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~  259 (314)
T 2ivs_A          180 NILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE  259 (314)
T ss_dssp             GEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred             eEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            999999999999999999876543322 1233457788999999988889999999999999999999 99999654211


Q ss_pred             cchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          621 ADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                        .  .    ......+.     ....+...++.+.+++.+||+.||++||+++|+++.|+++.
T Consensus       260 --~--~----~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~  310 (314)
T 2ivs_A          260 --R--L----FNLLKTGH-----RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM  310 (314)
T ss_dssp             --G--H----HHHHHTTC-----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --H--H----HHHhhcCC-----cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence              1  1    11111111     11222344567899999999999999999999999998753

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.97  E-value=8e-33  Score=292.24  Aligned_cols=235  Identities=23%  Similarity=0.239  Sum_probs=177.9

Q ss_pred             Ccccc-cccceEEEeEE--EEEeeee------hhhhHhh----------------------------eeeEEEEEec--C
Q 038002          441 GNDKV-NDKRKLLTVLA--GCLGSIT------FLCFLIA----------------------------ISSLLVYKHR--S  481 (702)
Q Consensus       441 ~~~~~-~~~~~l~~g~~--v~~~~~~------~~~~avk----------------------------i~~l~~~~~~--~  481 (702)
                      +..++ +..++||+|++  ||++...      ...||+|                            |+++++++.+  .
T Consensus        28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (318)
T 3lxp_A           28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGA  107 (318)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTT
T ss_pred             ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCC
Confidence            34444 66788999988  7665431      2456665                            7788877776  5


Q ss_pred             CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          482 SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       482 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      ...++||||+++++|.+++...  .+++.+++.++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++.
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~  182 (318)
T 3lxp_A          108 ASLQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK  182 (318)
T ss_dssp             TEEEEEECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             ceEEEEEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccc
Confidence            7889999999999999999765  489999999999999999999999   99999999999999999999999999999


Q ss_pred             ecCCCCCc--eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCc-------chhhhHHHHHH
Q 038002          562 LLMPNQTG--IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTA-------DEVLLSTWVYN  632 (702)
Q Consensus       562 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-------~~~~~~~~~~~  632 (702)
                      ........  ......+++.|+|||.+.+..++.++||||||+++|||++|+.||.......       ...........
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (318)
T 3lxp_A          183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE  262 (318)
T ss_dssp             ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred             cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence            87544321  2234557888999999988889999999999999999999999996431000       00000000011


Q ss_pred             hhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          633 CFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       633 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      .....     .....+...+..+.+++.+||+.||++|||++|++++|+.+.+
T Consensus       263 ~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  310 (318)
T 3lxp_A          263 LLERG-----ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE  310 (318)
T ss_dssp             HHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHhcc-----cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            11111     1112234456789999999999999999999999999998654

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.97  E-value=4.6e-32  Score=285.21  Aligned_cols=230  Identities=15%  Similarity=0.114  Sum_probs=169.4

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      ..++..+.||+|++  ||++....  ..||+|                              |+++++++..++..++||
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM  113 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence            34556678888877  88776542  445554                              888899999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+|+||||+||+++.++.+||+|||++........
T Consensus       114 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  189 (309)
T 2h34_A          114 RLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEKL  189 (309)
T ss_dssp             ECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred             EecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence            9999999999998654 689999999999999999999999   999999999999999999999999999987654433


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                      .......|++.|+|||.+.+..++.++||||||+++|||++|+.||....    ....    ..... .....  .....
T Consensus       190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~----~~~~~-~~~~~--~~~~~  258 (309)
T 2h34_A          190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ----LSVM----GAHIN-QAIPR--PSTVR  258 (309)
T ss_dssp             -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH----HHHH----HHHHH-SCCCC--GGGTS
T ss_pred             ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch----HHHH----HHHhc-cCCCC--ccccC
Confidence            33445678999999999998899999999999999999999999996431    1111    11111 11110  11223


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhCCcCCC
Q 038002          649 KITLERMVKTGLLCIQDEPNLRP-SMKNVILMLEGTMEIP  687 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RP-t~~evl~~Le~~~~~~  687 (702)
                      ...+..+.+++.+||+.||++|| +++++++.|+......
T Consensus       259 ~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~  298 (309)
T 2h34_A          259 PGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA  298 (309)
T ss_dssp             TTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred             CCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence            34456788999999999999999 9999999999865443

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.97  E-value=1.2e-32  Score=286.28  Aligned_cols=225  Identities=19%  Similarity=0.208  Sum_probs=172.0

Q ss_pred             ccccccceEEEeEE--EEEeeeeh---------hhhHhh---------------------------eeeEEEEEecCCee
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF---------LCFLIA---------------------------ISSLLVYKHRSSKK  484 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~---------~~~avk---------------------------i~~l~~~~~~~~~~  484 (702)
                      +.+...+.||+|++  ||++....         ..+|+|                           |+++++++.+++..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            44556678888877  77765443         124444                           88899999999999


Q ss_pred             EEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCc--------EEEec
Q 038002          485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWR--------AKISD  556 (702)
Q Consensus       485 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~--------~kl~D  556 (702)
                      ++||||+++++|.+++......+++.++..++.||+.||+|||++   +|+||||||+||+++.++.        +||+|
T Consensus        88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D  164 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD  164 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred             EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeecc
Confidence            999999999999999988765699999999999999999999999   9999999999999998887        99999


Q ss_pred             ccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhh
Q 038002          557 FGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFV  635 (702)
Q Consensus       557 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~  635 (702)
                      ||++.....     .....+++.|+|||.+.+ ..++.++||||||+++|||++|..|+.......   .... ...  .
T Consensus       165 fg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~---~~~~-~~~--~  233 (289)
T 4fvq_A          165 PGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ---RKLQ-FYE--D  233 (289)
T ss_dssp             CCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHHH-HHH--T
T ss_pred             CcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH---HHHH-Hhh--c
Confidence            999865422     123457899999998877 778999999999999999999655543321111   1100 000  1


Q ss_pred             ccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCCCC
Q 038002          636 AGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPIL  689 (702)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~~p  689 (702)
                      ....        +......+.+++.+||+.||++|||++|+++.|+.+.....+
T Consensus       234 ~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~  279 (289)
T 4fvq_A          234 RHQL--------PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV  279 (289)
T ss_dssp             TCCC--------CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred             cCCC--------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence            1111        111244688899999999999999999999999998764433

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.97  E-value=3.6e-32  Score=281.65  Aligned_cols=225  Identities=21%  Similarity=0.245  Sum_probs=172.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-----hhhHhh----------------------------eeeEEEEEecCCeeEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-----LCFLIA----------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-----~~~avk----------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      +.+...+.||+|++  ||++....     ..||+|                            |+++++++++ +..++|
T Consensus        12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v   90 (281)
T 3cc6_A           12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWII   90 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEE
T ss_pred             cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEE
Confidence            44556678888877  77776432     125554                            7888887765 457999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |||+++++|.+++......+++.++..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++.......
T Consensus        91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  167 (281)
T 3cc6_A           91 MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED  167 (281)
T ss_dssp             EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred             EecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence            999999999999987666799999999999999999999999   99999999999999999999999999998765443


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                      ........+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......    ...    ....+..     ..
T Consensus       168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~----~~~----~~~~~~~-----~~  234 (281)
T 3cc6_A          168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD----VIG----VLEKGDR-----LP  234 (281)
T ss_dssp             -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG----HHH----HHHHTCC-----CC
T ss_pred             ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH----HHH----HHhcCCC-----CC
Confidence            333344557889999999988899999999999999999998 999996432111    111    1111110     11


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .+...++.+.+++.+||+.||++||+++|+++.|+.+.
T Consensus       235 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~  272 (281)
T 3cc6_A          235 KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY  272 (281)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence            12234567889999999999999999999999998754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.97  E-value=5.2e-32  Score=299.95  Aligned_cols=222  Identities=24%  Similarity=0.244  Sum_probs=176.0

Q ss_pred             ccccccceEEEeEE--EEEeeeehhhhHhh-------------------------eeeEEEEEecC-CeeEEEEecCCCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITFLCFLIA-------------------------ISSLLVYKHRS-SKKLLVYEFMSKG  494 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~~~~avk-------------------------i~~l~~~~~~~-~~~~lV~e~~~~g  494 (702)
                      +.++..++||+|+|  ||++......||||                         |+++++++.+. +..++||||+++|
T Consensus       193 ~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g  272 (450)
T 1k9a_A          193 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG  272 (450)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTC
T ss_pred             HHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCC
Confidence            34455678899987  88887766777777                         77888776544 4899999999999


Q ss_pred             CHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeec
Q 038002          495 SLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG  573 (702)
Q Consensus       495 sL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  573 (702)
                      +|.+++..... .+++..++.++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++......    ..
T Consensus       273 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~----~~  345 (450)
T 1k9a_A          273 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DT  345 (450)
T ss_dssp             BHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred             cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc----cC
Confidence            99999987543 368999999999999999999999   99999999999999999999999999998643221    22


Q ss_pred             eeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHH
Q 038002          574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL  652 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  652 (702)
                      ..+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......  .      ......+.     ....+...+
T Consensus       346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~------~~~i~~~~-----~~~~p~~~~  412 (450)
T 1k9a_A          346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--V------VPRVEKGY-----KMDAPDGCP  412 (450)
T ss_dssp             -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--H------HHHHHTTC-----CCCCCTTCC
T ss_pred             CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--H------HHHHHcCC-----CCCCCCcCC
Confidence            356889999999999999999999999999999998 999997542211  1      11111111     112233446


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          653 ERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       653 ~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ..+.++|.+||+.||++|||+++|++.|+.+.
T Consensus       413 ~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~  444 (450)
T 1k9a_A          413 PAVYDVMKNCWHLDAATRPTFLQLREQLEHIR  444 (450)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            78899999999999999999999999998754

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.97  E-value=1.5e-32  Score=285.35  Aligned_cols=197  Identities=25%  Similarity=0.323  Sum_probs=163.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++++.+++..++||||+++++|.+++.... ..+++..+..++.||+.||+|||++   +|+|+||||+||+++.+
T Consensus        71 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~  147 (288)
T 3kfa_A           71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN  147 (288)
T ss_dssp             BCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGG
T ss_pred             EeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCC
Confidence            8889999999999999999999999999998753 3589999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.+||+|||++...............+++.|+|||.+.+..++.++||||||+++|+|++ |..||......    ....
T Consensus       148 ~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~----~~~~  223 (288)
T 3kfa_A          148 HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYE  223 (288)
T ss_dssp             GCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHH
T ss_pred             CCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHH
Confidence            999999999998775554444455677889999999988899999999999999999999 99999654211    1111


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      .    ....     .....+...++.+.+++.+||+.||++|||+++++++|+.+
T Consensus       224 ~----~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~  269 (288)
T 3kfa_A          224 L----LEKD-----YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  269 (288)
T ss_dssp             H----HHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             H----Hhcc-----CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence            1    1111     11122233456789999999999999999999999999864

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=2.6e-32  Score=288.25  Aligned_cols=227  Identities=20%  Similarity=0.239  Sum_probs=161.3

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      .++..++||+|++  ||++....  ..||+|                            |+++++++.+++..++||||+
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   85 (317)
T 2pmi_A            6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM   85 (317)
T ss_dssp             -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECC
T ss_pred             ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEec
Confidence            3455567777776  77765442  455555                            888899999999999999999


Q ss_pred             CCCCHHHHhhcCC-----CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCC
Q 038002          492 SKGSLADLLFNLE-----TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       492 ~~gsL~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  566 (702)
                      + ++|.+++....     ..+++..+..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++......
T Consensus        86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  161 (317)
T 2pmi_A           86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP  161 (317)
T ss_dssp             C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred             C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence            8 59999986532     3588999999999999999999999   9999999999999999999999999999876432


Q ss_pred             CCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhc---------
Q 038002          567 QTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVA---------  636 (702)
Q Consensus       567 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~---------  636 (702)
                      .. ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||......   ..+.. .......         
T Consensus       162 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~-i~~~~~~~~~~~~~~~  236 (317)
T 2pmi_A          162 VN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE---EQLKL-IFDIMGTPNESLWPSV  236 (317)
T ss_dssp             CC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHH-HHHHHCSCCTTTCGGG
T ss_pred             cc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHHH-HHHHhCCCChhHhhhh
Confidence            22 2334568999999998876 46899999999999999999999999754211   11111 1110000         


Q ss_pred             ---------------cccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          637 ---------------GEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       637 ---------------~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                                     ..+...+.+.........+.+++.+||+.||++|||++|+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence                           0000001111112345678999999999999999999999863

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=5.2e-32  Score=287.93  Aligned_cols=226  Identities=22%  Similarity=0.288  Sum_probs=173.0

Q ss_pred             ccccccceEEEeEE--EEEeeeeh------hhhHhh----------------------------eeeEEEEEecCCeeEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF------LCFLIA----------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~------~~~avk----------------------------i~~l~~~~~~~~~~~l  486 (702)
                      ..+...+.||+|++  ||++....      ..||+|                            |+++++++.+.+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            34455678999987  88876542      135655                            7888999999999999


Q ss_pred             EEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCC
Q 038002          487 VYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  566 (702)
                      ||||+++++|.+++......+++.+++.++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++......
T Consensus       124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~  200 (333)
T 1mqb_A          124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  200 (333)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence            9999999999999987766799999999999999999999999   9999999999999999999999999999876443


Q ss_pred             CCc--eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhcccccccc
Q 038002          567 QTG--IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV  643 (702)
Q Consensus       567 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  643 (702)
                      ...  ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....    ..    .......+.     
T Consensus       201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~----~~----~~~~~~~~~-----  267 (333)
T 1mqb_A          201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HE----VMKAINDGF-----  267 (333)
T ss_dssp             ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HH----HHHHHHTTC-----
T ss_pred             cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH----HH----HHHHHHCCC-----
Confidence            221  1222345788999999998899999999999999999999 9999964311    11    111111111     


Q ss_pred             ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          644 EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       644 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ....+...+..+.+++.+||+.||++||++.+++++|+.+.
T Consensus       268 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  308 (333)
T 1mqb_A          268 RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI  308 (333)
T ss_dssp             CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            01112234567899999999999999999999999998643

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=3.5e-32  Score=293.75  Aligned_cols=193  Identities=24%  Similarity=0.311  Sum_probs=156.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE--eC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI--DD  548 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll--~~  548 (702)
                      |+++++++.+++..+|||||+++++|.+++......+++.++..++.||+.||+|||++   +|+||||||+|||+  +.
T Consensus       148 Iv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~  224 (373)
T 2x4f_A          148 LIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRD  224 (373)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETT
T ss_pred             CCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCC
Confidence            88899999999999999999999999999987665799999999999999999999999   99999999999999  56


Q ss_pred             CCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      ++.+||+|||++........  .....||+.|+|||++.+..++.++||||||+++|||++|+.||....   ....+..
T Consensus       225 ~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~---~~~~~~~  299 (373)
T 2x4f_A          225 AKQIKIIDFGLARRYKPREK--LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN---DAETLNN  299 (373)
T ss_dssp             TTEEEECCCSSCEECCTTCB--CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS---HHHHHHH
T ss_pred             CCcEEEEeCCCceecCCccc--cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHH
Confidence            77899999999987644332  234568999999999998899999999999999999999999996541   1111111


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                           +......  ..........+.+.+++.+||+.||++|||++|+++
T Consensus       300 -----i~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          300 -----ILACRWD--LEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             -----HHHTCCC--SCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -----HHhccCC--CChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                 1111110  011111234568899999999999999999999987

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.97  E-value=7.7e-32  Score=289.86  Aligned_cols=224  Identities=21%  Similarity=0.184  Sum_probs=165.5

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      .++++..+.||+|++  ||++....  ..||+|                          |+++++++.+++..++||||+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   98 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA   98 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence            355667788888887  78777653  566766                          888999999999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCc--EEEecccceeecCCCCCc
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWR--AKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~--~kl~Dfg~a~~~~~~~~~  569 (702)
                      ++|+|.+++.... ++++.++..++.||+.||+|||++   +|+||||||+||+++.++.  +||+|||+++......  
T Consensus        99 ~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~--  172 (361)
T 3uc3_A           99 SGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--  172 (361)
T ss_dssp             CSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred             CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccccC--
Confidence            9999999997654 699999999999999999999999   9999999999999987765  9999999997532222  


Q ss_pred             eeeceeccccccCcccccCCCCCcc-ccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          570 IVAGVRGSRGYMAPEWQNSGLITVK-SDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                      ......||+.|+|||++.+..++.+ +||||||+++|+|++|+.||.............    ..........    ...
T Consensus       173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~----~~~~~~~~~~----~~~  244 (361)
T 3uc3_A          173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTI----QRILSVKYSI----PDD  244 (361)
T ss_dssp             --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHH----HHHHTTCCCC----CTT
T ss_pred             CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHH----HHHhcCCCCC----CCc
Confidence            2334569999999999887777655 899999999999999999997543222211111    1111111100    111


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ...+..+.+++.+||+.||++|||++|+++.
T Consensus       245 ~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          245 IRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             CCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            1235678899999999999999999999974

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.97  E-value=5.3e-32  Score=286.74  Aligned_cols=230  Identities=17%  Similarity=0.191  Sum_probs=168.4

Q ss_pred             ccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          445 VNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      ++..++||+|++  ||++....  ..||+|                            |+++++++.+++..++||||++
T Consensus         4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   83 (324)
T 3mtl_A            4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD   83 (324)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc
Confidence            445567777776  77776543  456665                            7788899999999999999997


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceee
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA  572 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  572 (702)
                       ++|.+++......+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++....... ....
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~~~  158 (324)
T 3mtl_A           84 -KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KTYD  158 (324)
T ss_dssp             -EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred             -cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc-cccc
Confidence             599999988776799999999999999999999999   99999999999999999999999999998653222 2233


Q ss_pred             ceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhh---hcccccccccc---
Q 038002          573 GVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF---VAGEFNKLVEE---  645 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---  645 (702)
                      ...||+.|+|||++.+ ..++.++||||||+++|||++|+.||...... +  .. .......   ....+......   
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~--~~-~~i~~~~~~~~~~~~~~~~~~~~~  234 (324)
T 3mtl_A          159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE-E--QL-HFIFRILGTPTEETWPGILSNEEF  234 (324)
T ss_dssp             ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-H--HH-HHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred             cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-H--HH-HHHHHHhCCCChHhchhhhcchhh
Confidence            4568999999998876 57899999999999999999999999754211 1  11 1111100   00001100000   


Q ss_pred             --------------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhCC
Q 038002          646 --------------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL--MLEGT  683 (702)
Q Consensus       646 --------------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~--~Le~~  683 (702)
                                    .........+.+++.+||+.||++|||++|+++  .+.++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  288 (324)
T 3mtl_A          235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL  288 (324)
T ss_dssp             HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhc
Confidence                          112234567889999999999999999999988  34443

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=1e-31  Score=302.64  Aligned_cols=221  Identities=24%  Similarity=0.260  Sum_probs=178.2

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      ..++..+.||+|++  ||++....  ..||+|                              |++++..+++++..|+||
T Consensus       184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  263 (576)
T 2acx_A          184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL  263 (576)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence            45566788999988  88887643  556665                              888899999999999999


Q ss_pred             ecCCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          489 EFMSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      ||++||+|.+++..... .+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||++.......
T Consensus       264 Ey~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~  340 (576)
T 2acx_A          264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ  340 (576)
T ss_dssp             CCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             EcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence            99999999999987542 489999999999999999999999   99999999999999999999999999998764433


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                        ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+..    .....      ....
T Consensus       341 --~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~----~i~~~------~~~~  408 (576)
T 2acx_A          341 --TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER----LVKEV------PEEY  408 (576)
T ss_dssp             --CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHH----HHHHC------CCCC
T ss_pred             --cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHH----Hhhcc------cccC
Confidence              23445799999999999988999999999999999999999999976432211111111    11111      1122


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRP-----SMKNVIL  678 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~  678 (702)
                      +...+..+.+++.+||+.||++||     +++||++
T Consensus       409 p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          409 SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            334467889999999999999999     7888875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=4.1e-32  Score=300.55  Aligned_cols=217  Identities=20%  Similarity=0.236  Sum_probs=173.4

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      ..++..+.||+|++  ||++....  ..||+|                              |++++.++.+++..++||
T Consensus       148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~  227 (446)
T 4ejn_A          148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM  227 (446)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence            34556788999988  88776543  566666                              677888899999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      ||+++|+|.+++.... .+++..+..++.||+.||+|||+ +   +|+||||||+|||++.++.+||+|||+++......
T Consensus       228 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  303 (446)
T 4ejn_A          228 EYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG  303 (446)
T ss_dssp             CCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred             eeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence            9999999999997654 78999999999999999999998 8   99999999999999999999999999998543222


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                       .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   . ..    ...+.....      ..
T Consensus       304 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~-~~----~~~i~~~~~------~~  368 (446)
T 4ejn_A          304 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---E-KL----FELILMEEI------RF  368 (446)
T ss_dssp             ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---H-HH----HHHHHHCCC------CC
T ss_pred             -cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH---H-HH----HHHHHhCCC------CC
Confidence             223456799999999999999999999999999999999999999964311   1 11    111111111      12


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRP-----SMKNVIL  678 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~  678 (702)
                      +......+.+++.+||+.||++||     +++|+++
T Consensus       369 p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          369 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            223456788999999999999999     9999986

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.97  E-value=6e-32  Score=283.98  Aligned_cols=198  Identities=22%  Similarity=0.243  Sum_probs=152.0

Q ss_pred             eeeEEEEEecCC-----eeEEEEecCCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKHRSS-----KKLLVYEFMSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~~~~-----~~~lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |+++++++....     ..++||||+. ++|.+++..... .+++.++..++.||+.||+|||++   +|+||||||+||
T Consensus        76 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Ni  151 (308)
T 3g33_A           76 VVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENI  151 (308)
T ss_dssp             BCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTE
T ss_pred             eEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHE
Confidence            667777776554     5899999997 599999987653 389999999999999999999999   999999999999


Q ss_pred             EEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       545 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      +++.++.+||+|||++.......  ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......   .
T Consensus       152 l~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~  226 (308)
T 3g33_A          152 LVTSGGTVKLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA---D  226 (308)
T ss_dssp             EECTTSCEEECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH---H
T ss_pred             EEcCCCCEEEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH---H
Confidence            99999999999999998654322  234567899999999998889999999999999999999999999654211   1


Q ss_pred             hhHHHHHHhh---hccccccc-------cc-------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCF---VAGEFNKL-------VE-------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~---~~~~~~~~-------~~-------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .... .....   ....+...       ..       ........+.+.+++.+||+.||++|||++|+++
T Consensus       227 ~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          227 QLGK-IFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HHHH-HHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHH-HHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            1111 11110   00000000       00       0112234578899999999999999999999986

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.97  E-value=9.4e-32  Score=278.01  Aligned_cols=217  Identities=24%  Similarity=0.280  Sum_probs=152.2

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEe
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      .++..+.||+|++  ||++....  ..||+|                              |++++.++.+++..++|||
T Consensus        12 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   91 (278)
T 3cok_A           12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLE   91 (278)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEe
Confidence            3445567777776  77766432  445554                              7888899999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      |+++++|.+++......+++.++..++.|+++||+|||++   +|+|+||||+||+++.++.+||+|||++........ 
T Consensus        92 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-  167 (278)
T 3cok_A           92 MCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE-  167 (278)
T ss_dssp             CCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred             cCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC-
Confidence            9999999999988766799999999999999999999999   999999999999999999999999999987643222 


Q ss_pred             eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCH
Q 038002          570 IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK  649 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (702)
                      ......|++.|+|||.+.+..++.++||||||+++|||++|+.||........   .     .......      ...+.
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~-----~~~~~~~------~~~~~  233 (278)
T 3cok_A          168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT---L-----NKVVLAD------YEMPS  233 (278)
T ss_dssp             ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCSSC------CCCCT
T ss_pred             cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH---H-----HHHhhcc------cCCcc
Confidence            22345689999999999888899999999999999999999999975422110   0     0000000      11223


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          650 ITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..+..+.+++.+||+.||++|||++++++
T Consensus       234 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          234 FLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            34567889999999999999999999986

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.97  E-value=2.4e-32  Score=282.66  Aligned_cols=225  Identities=25%  Similarity=0.360  Sum_probs=175.9

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      +.++..+.||+|++  ||++.... ..+|+|                          |+++++++. ++..++||||+++
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~   91 (279)
T 1qpc_A           13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMEN   91 (279)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTT
T ss_pred             HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCC
Confidence            44556678888876  77776544 456665                          777777765 5568999999999


Q ss_pred             CCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceee
Q 038002          494 GSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA  572 (702)
Q Consensus       494 gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  572 (702)
                      ++|.+++.... ..+++.++..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++............
T Consensus        92 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  168 (279)
T 1qpc_A           92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE  168 (279)
T ss_dssp             CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred             CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccccccc
Confidence            99999997543 2589999999999999999999999   9999999999999999999999999999877544333333


Q ss_pred             ceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHH
Q 038002          573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT  651 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  651 (702)
                      ...+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....   . ..    ......+.     ....+...
T Consensus       169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~-~~----~~~~~~~~-----~~~~~~~~  235 (279)
T 1qpc_A          169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN---P-EV----IQNLERGY-----RMVRPDNC  235 (279)
T ss_dssp             TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH---H-HH----HHHHHTTC-----CCCCCTTC
T ss_pred             CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH---H-HH----HHHHhccc-----CCCCcccc
Confidence            4557789999999988889999999999999999999 9999964311   1 11    11111110     11122334


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          652 LERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       652 ~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ++.+.+++.+||+.||++|||+++++++|+.+.
T Consensus       236 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  268 (279)
T 1qpc_A          236 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (279)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            568899999999999999999999999999853

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.97  E-value=1.2e-32  Score=296.76  Aligned_cols=198  Identities=25%  Similarity=0.325  Sum_probs=158.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |+++++++.+++..++||||+++|+|.+++....      ..+++.+++.++.||+.||+|||++   +|+||||||+||
T Consensus       136 Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI  212 (367)
T 3l9p_A          136 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNC  212 (367)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred             CCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhE
Confidence            8889999999999999999999999999997643      3588999999999999999999999   999999999999


Q ss_pred             EEeCCC---cEEEecccceeecCCCC-CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCC
Q 038002          545 LIDDSW---RAKISDFGLAKLLMPNQ-TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVS  619 (702)
Q Consensus       545 ll~~~~---~~kl~Dfg~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~  619 (702)
                      |++.++   .+||+|||+++...... ........+|+.|+|||.+.+..++.++|||||||++|||++ |..||.... 
T Consensus       213 ll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~-  291 (367)
T 3l9p_A          213 LLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-  291 (367)
T ss_dssp             EESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-
T ss_pred             EEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-
Confidence            998555   59999999997543221 112234567899999999988899999999999999999998 999996541 


Q ss_pred             CcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          620 TADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                         ....    ......+..     ...+...+..+.+++.+||+.||++||++++|++.|+.+.
T Consensus       292 ---~~~~----~~~i~~~~~-----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~  344 (367)
T 3l9p_A          292 ---NQEV----LEFVTSGGR-----MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  344 (367)
T ss_dssp             ---HHHH----HHHHHTTCC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---HHHH----HHHHHcCCC-----CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence               1111    111111111     1112234567889999999999999999999999998754

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.97  E-value=5e-32  Score=290.34  Aligned_cols=234  Identities=14%  Similarity=0.127  Sum_probs=176.0

Q ss_pred             ccccccceEEEeEE--EEEeeee----------hhhhHhhee-------------------------------------e
Q 038002          443 DKVNDKRKLLTVLA--GCLGSIT----------FLCFLIAIS-------------------------------------S  473 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~----------~~~~avki~-------------------------------------~  473 (702)
                      +.+...+.||+|++  ||++...          ...||+|+.                                     +
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~  121 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT  121 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence            45566778899887  8888764          356777622                                     1


Q ss_pred             EEEEEec-CCeeEEEEecCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC-
Q 038002          474 LLVYKHR-SSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW-  550 (702)
Q Consensus       474 l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~-  550 (702)
                      ++.++.. ++..++||||+ +++|.+++... ...+++.+++.++.||+.||+|||++   +|+||||||+||+++.++ 
T Consensus       122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~~~~~  197 (352)
T 2jii_A          122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVDPEDQ  197 (352)
T ss_dssp             CCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEETTEE
T ss_pred             hhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEcCCCC
Confidence            3445544 78999999999 99999999875 34699999999999999999999999   999999999999999998 


Q ss_pred             -cEEEecccceeecCCCCCc------eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcch
Q 038002          551 -RAKISDFGLAKLLMPNQTG------IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE  623 (702)
Q Consensus       551 -~~kl~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~  623 (702)
                       .+||+|||+++.+......      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.........
T Consensus       198 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~  277 (352)
T 2jii_A          198 SQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTED  277 (352)
T ss_dssp             EEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHH
T ss_pred             ceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHH
Confidence             8999999999876432211      123457899999999999989999999999999999999999999765322211


Q ss_pred             hhhHHHHHHhhhcccccccccc-ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          624 VLLSTWVYNCFVAGEFNKLVEE-EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       624 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ..  ... ... ......+... ......+..+.+++.+||+.||++||++++|+++|+++.
T Consensus       278 ~~--~~~-~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  335 (352)
T 2jii_A          278 IM--KQK-QKF-VDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL  335 (352)
T ss_dssp             HH--HHH-HHH-HHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             HH--HHH-Hhc-cCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence            11  111 111 1111111111 001123567889999999999999999999999998864

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.97  E-value=6.3e-32  Score=294.33  Aligned_cols=239  Identities=18%  Similarity=0.154  Sum_probs=182.5

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCC--eeEEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSS--KKLLV  487 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~--~~~lV  487 (702)
                      ...+...+.||+|++  ||++....  ..||+|                            |+++++++...+  ..++|
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            456667788999987  88887653  566766                            777887777654  78999


Q ss_pred             EecCCCCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE----eCCCcEEEeccccee
Q 038002          488 YEFMSKGSLADLLFNLET--RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI----DDSWRAKISDFGLAK  561 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll----~~~~~~kl~Dfg~a~  561 (702)
                      |||+++|+|.+++.....  .+++.+++.++.||+.||+|||++   +|+||||||+||++    +.++.+||+|||+++
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~  164 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence            999999999999976532  389999999999999999999999   99999999999999    777789999999998


Q ss_pred             ecCCCCCceeeceeccccccCcccccC--------CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHh
Q 038002          562 LLMPNQTGIVAGVRGSRGYMAPEWQNS--------GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNC  633 (702)
Q Consensus       562 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~  633 (702)
                      ......  ......||+.|+|||++.+        ..++.++||||||+++|||++|+.||...................
T Consensus       165 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~  242 (396)
T 4eut_A          165 ELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG  242 (396)
T ss_dssp             ECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred             EccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence            764432  2334568999999998764        567889999999999999999999997543222211111111111


Q ss_pred             hhcccc-------------ccc--cccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          634 FVAGEF-------------NKL--VEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       634 ~~~~~~-------------~~~--~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      .....+             ...  ............+.+++.+||+.||++||+++|+++.|+.+..
T Consensus       243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred             CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence            000000             000  0113457788899999999999999999999999999987654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.97  E-value=4.8e-32  Score=287.50  Aligned_cols=226  Identities=23%  Similarity=0.278  Sum_probs=170.3

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hh----hHhh----------------------------eeeEEEEEecCCeeEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LC----FLIA----------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~----~avk----------------------------i~~l~~~~~~~~~~~l  486 (702)
                      ..++..+.||+|++  ||++....  ..    +++|                            |+++++++..+. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence            45566788899887  88876532  22    2333                            777777777654 889


Q ss_pred             EEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCC
Q 038002          487 VYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  566 (702)
                      |+||+++|+|.+++......+++.+++.++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++......
T Consensus        94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~  170 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence            9999999999999988776899999999999999999999999   9999999999999999999999999999876433


Q ss_pred             CC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          567 QT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       567 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      .. .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......  +  ....    ...+.     .
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~--~~~~----~~~~~-----~  237 (327)
T 3lzb_A          171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--E--ISSI----LEKGE-----R  237 (327)
T ss_dssp             ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--G--HHHH----HHTTC-----C
T ss_pred             cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--H--HHHH----HHcCC-----C
Confidence            32 12233456788999999999999999999999999999999 99999754211  1  1111    11111     1


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ...+......+.+++.+||+.||++||+++|+++.|+.+..
T Consensus       238 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          238 LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            11222345578899999999999999999999999998654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.97  E-value=4.4e-31  Score=296.66  Aligned_cols=222  Identities=23%  Similarity=0.246  Sum_probs=176.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +.+...+.||+|++  ||++....  ..||+|                              |++++..+++.+..|+||
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            44556678999988  88887643  566665                              788889999999999999


Q ss_pred             ecCCCCCHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCC
Q 038002          489 EFMSKGSLADLLFNLE---TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP  565 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~  565 (702)
                      ||++||+|.+++....   ..+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.+..
T Consensus       265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~  341 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA  341 (543)
T ss_dssp             CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence            9999999999997643   3589999999999999999999999   999999999999999999999999999987644


Q ss_pred             CCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccc
Q 038002          566 NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE  645 (702)
Q Consensus       566 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  645 (702)
                      ... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+    .........      
T Consensus       342 ~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~----~~~i~~~~~------  410 (543)
T 3c4z_A          342 GQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL----KQRVLEQAV------  410 (543)
T ss_dssp             TCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHH----HHHHHHCCC------
T ss_pred             CCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHH----HHHHhhccc------
Confidence            332 233457999999999999999999999999999999999999999765322111111    111111111      


Q ss_pred             ccCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 038002          646 EVDKITLERMVKTGLLCIQDEPNLRPSM-----KNVIL  678 (702)
Q Consensus       646 ~~~~~~~~~l~~li~~cL~~dP~~RPt~-----~evl~  678 (702)
                      ..+...+..+.+++.+||+.||++||++     ++|++
T Consensus       411 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          411 TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence            1233446788899999999999999975     56654

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.97  E-value=2.2e-32  Score=289.89  Aligned_cols=234  Identities=23%  Similarity=0.234  Sum_probs=178.9

Q ss_pred             ccccccceEEEeEE--EEEeee------ehhhhHhh---------------------------eeeEEEEEe--cCCeeE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSI------TFLCFLIA---------------------------ISSLLVYKH--RSSKKL  485 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~------~~~~~avk---------------------------i~~l~~~~~--~~~~~~  485 (702)
                      +.++..+.||+|++  ||++..      ....||+|                           |+++++++.  +++..+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            45566788999987  887763      12556666                           777776664  567799


Q ss_pred             EEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCC
Q 038002          486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP  565 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~  565 (702)
                      +||||+++++|.+++......+++.+++.++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++.....
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  179 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPL  179 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred             EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence            99999999999999987655799999999999999999999999   999999999999999999999999999997754


Q ss_pred             CCCc--eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCc-------chhhhHHHHHHhhhc
Q 038002          566 NQTG--IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTA-------DEVLLSTWVYNCFVA  636 (702)
Q Consensus       566 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-------~~~~~~~~~~~~~~~  636 (702)
                      ....  ......+++.|+|||.+.+..++.++||||||+++|+|++|..||.......       ...............
T Consensus       180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (327)
T 3lxl_A          180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE  259 (327)
T ss_dssp             TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred             CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence            4332  1233557888999999988889999999999999999999999986431100       000000001111111


Q ss_pred             cccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          637 GEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       637 ~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      +     .....+...++.+.+++.+||+.||++|||++|++++|+.+.
T Consensus       260 ~-----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  302 (327)
T 3lxl_A          260 G-----QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW  302 (327)
T ss_dssp             T-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred             c-----cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            1     111223445678899999999999999999999999999764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.97  E-value=3.6e-31  Score=274.41  Aligned_cols=222  Identities=20%  Similarity=0.218  Sum_probs=175.0

Q ss_pred             CcccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEE
Q 038002          441 GNDKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       441 ~~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      +.+.++..+.||+|++  ||++....  ..+|+|                             |+++++++.+++..++|
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   83 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   83 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence            3556677788898877  88776543  455555                             78889999999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCc---EEEecccceeecC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWR---AKISDFGLAKLLM  564 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~---~kl~Dfg~a~~~~  564 (702)
                      |||+++++|.+.+.... .+++.++..++.|++.||+|||++   +|+||||||+||+++.++.   +||+|||++....
T Consensus        84 ~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~  159 (284)
T 3kk8_A           84 FDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  159 (284)
T ss_dssp             ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence            99999999999887654 689999999999999999999999   9999999999999976655   9999999998764


Q ss_pred             CCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          565 PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       565 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      ....  .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....    ....    ......+.....  
T Consensus       160 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~----~~~~~~~~~~~~--  227 (284)
T 3kk8_A          160 DSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED----QHRL----YAQIKAGAYDYP--  227 (284)
T ss_dssp             SSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHH----HHHHHHTCCCCC--
T ss_pred             cCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc----hhHH----HHHHHhccccCC--
Confidence            3322  334578999999999999999999999999999999999999996431    1111    111111111110  


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .......++.+.+++.+||+.||++|||++|+++
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          228 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             chhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            1111234567889999999999999999999988

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.97  E-value=4e-32  Score=286.26  Aligned_cols=203  Identities=21%  Similarity=0.248  Sum_probs=150.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++.+++..++||||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        73 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~  148 (316)
T 2ac3_A           73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPN  148 (316)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSS
T ss_pred             eeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCC
Confidence            8888999999999999999999999999997754 689999999999999999999999   999999999999998877


Q ss_pred             c---EEEecccceeecCCCCC------ceeeceeccccccCcccccC-----CCCCccccccchhHhHHHhhhCCcCCcC
Q 038002          551 R---AKISDFGLAKLLMPNQT------GIVAGVRGSRGYMAPEWQNS-----GLITVKSDVYSFGVVLLEIICCRSNFEV  616 (702)
Q Consensus       551 ~---~kl~Dfg~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~  616 (702)
                      .   +||+|||++........      .......||+.|+|||++..     ..++.++||||||+++|||++|+.||..
T Consensus       149 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  228 (316)
T 2ac3_A          149 QVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG  228 (316)
T ss_dssp             SSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcc
Confidence            6   99999999986532211      11223568999999998864     5678999999999999999999999976


Q ss_pred             CCCCcchhh-------hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          617 NVSTADEVL-------LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       617 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .........       ...........+....  ........+..+.+++.+||+.||++|||++|+++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          229 RCGSDCGWDRGEACPACQNMLFESIQEGKYEF--PDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             CCCSCSCC----CCHHHHHHHHHHHHHCCCCC--CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cccccccccccccchhHHHHHHHHHhccCccc--CchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            532210000       0011111111111100  000001235678999999999999999999999984

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.97  E-value=2e-31  Score=286.46  Aligned_cols=168  Identities=25%  Similarity=0.240  Sum_probs=145.1

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------------eeeEEEEEecCCeeEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------------i~~l~~~~~~~~~~~l  486 (702)
                      ...++..++||+|++  ||++....  ..||+|                               |+++++++...+..++
T Consensus        34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~l  113 (360)
T 3llt_A           34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCL  113 (360)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEE
T ss_pred             cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEE
Confidence            455667788999987  88877643  556666                               7788899999999999


Q ss_pred             EEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC-----------------
Q 038002          487 VYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD-----------------  548 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~-----------------  548 (702)
                      ||||+ +++|.+++.... ..+++.++..++.||+.||+|||++   +|+||||||+|||++.                 
T Consensus       114 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~  189 (360)
T 3llt_A          114 IFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDGK  189 (360)
T ss_dssp             EECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTTTCC
T ss_pred             EEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhcccccc
Confidence            99999 999999998764 3589999999999999999999999   9999999999999975                 


Q ss_pred             --------CCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCC
Q 038002          549 --------SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVN  617 (702)
Q Consensus       549 --------~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~  617 (702)
                              ++.+||+|||++......    .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       190 ~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  262 (360)
T 3llt_A          190 KIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH  262 (360)
T ss_dssp             EEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence                    789999999999865332    23456899999999999999999999999999999999999999754

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.97  E-value=5.4e-32  Score=313.59  Aligned_cols=216  Identities=21%  Similarity=0.250  Sum_probs=174.1

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------------eeeEEEEEecCCeeEEEE
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      .+...+.||+|+|  ||++....  ..||||                               |++++.++++.+..||||
T Consensus       342 ~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~  421 (674)
T 3pfq_A          342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM  421 (674)
T ss_dssp             TEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEE
T ss_pred             ceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEE
Confidence            3445567888877  77776543  445655                               677888999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+++|+|.+++...+ .+++.+++.++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++...... 
T Consensus       422 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~-  496 (674)
T 3pfq_A          422 EYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-  496 (674)
T ss_dssp             ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT-
T ss_pred             eCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccCC-
Confidence            9999999999998765 799999999999999999999999   99999999999999999999999999998643322 


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                      .......||+.|+|||++.+..++.++||||||+++|||++|+.||....   ...     ....+.....      ..+
T Consensus       497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~---~~~-----~~~~i~~~~~------~~p  562 (674)
T 3pfq_A          497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED---EDE-----LFQSIMEHNV------AYP  562 (674)
T ss_dssp             CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS---HHH-----HHHHHHSSCC------CCC
T ss_pred             cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC---HHH-----HHHHHHhCCC------CCC
Confidence            23445789999999999999999999999999999999999999997531   111     1112222211      223


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSM-----KNVIL  678 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~-----~evl~  678 (702)
                      ...+.++.+||.+||+.||++||++     +||++
T Consensus       563 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          563 KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence            3456788999999999999999997     66664

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.97  E-value=1.1e-31  Score=284.31  Aligned_cols=178  Identities=20%  Similarity=0.274  Sum_probs=140.0

Q ss_pred             eeEEEEecCCCCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccce
Q 038002          483 KKLLVYEFMSKGSLADLLFNLET--RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA  560 (702)
Q Consensus       483 ~~~lV~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a  560 (702)
                      ..++||||+++++|.+++.....  ..++..++.++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++
T Consensus       135 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a  211 (332)
T 3qd2_B          135 YLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLV  211 (332)
T ss_dssp             EEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcc
Confidence            38999999999999999987543  255667899999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCC-----------ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          561 KLLMPNQT-----------GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       561 ~~~~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      ........           .......||+.|+|||.+.+..++.++||||||+++|||++|..|+...      ..    
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~------~~----  281 (332)
T 3qd2_B          212 TAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER------VR----  281 (332)
T ss_dssp             EECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH------HH----
T ss_pred             cccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH------HH----
Confidence            98754421           1123456999999999999889999999999999999999987765311      00    


Q ss_pred             HHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 VYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..........     +.........+.+++.+||+.||++|||++|+++
T Consensus       282 ~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          282 IITDVRNLKF-----PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HHHHHHTTCC-----CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             HHHHhhccCC-----CcccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            1111111111     1122334567789999999999999999999986

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.97  E-value=9.7e-32  Score=280.82  Aligned_cols=225  Identities=23%  Similarity=0.356  Sum_probs=171.7

Q ss_pred             cccccceEEEeEE--EEEeeeeh-----hhhHhh----------------------------eeeEEEE-EecCCeeEEE
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF-----LCFLIA----------------------------ISSLLVY-KHRSSKKLLV  487 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~-----~~~avk----------------------------i~~l~~~-~~~~~~~~lV  487 (702)
                      .++..+.||+|++  ||++....     ..+|+|                            |++++++ +..++..++|
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  105 (298)
T 3f66_A           26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  105 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence            3445678888877  88776432     124444                            7777776 5667889999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |||+++++|.+++......+++.++..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++.......
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  182 (298)
T 3f66_A          106 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  182 (298)
T ss_dssp             EECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred             EeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccccc
Confidence            999999999999988776789999999999999999999999   99999999999999999999999999998664332


Q ss_pred             C---ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhcccccccc
Q 038002          568 T---GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV  643 (702)
Q Consensus       568 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  643 (702)
                      .   .......+|+.|+|||.+.+..++.++||||||+++|||++ |.+||....... .   ...    ...+..    
T Consensus       183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-~---~~~----~~~~~~----  250 (298)
T 3f66_A          183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-I---TVY----LLQGRR----  250 (298)
T ss_dssp             GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT-H---HHH----HHTTCC----
T ss_pred             hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH-H---HHH----HhcCCC----
Confidence            1   12234567889999999988899999999999999999999 555554331111 1   110    111110    


Q ss_pred             ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          644 EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       644 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                       ...+...+..+.+++.+||+.||++|||++|++++|+++.
T Consensus       251 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~  290 (298)
T 3f66_A          251 -LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  290 (298)
T ss_dssp             -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence             0112223457889999999999999999999999999864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.97  E-value=5.9e-32  Score=287.58  Aligned_cols=199  Identities=27%  Similarity=0.359  Sum_probs=161.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCC---------------CCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLET---------------RPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~---------------~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                      |+++++++.+++..++||||+++++|.+++.....               .+++.+++.++.||+.||+|||++   +|+
T Consensus       103 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~iv  179 (334)
T 2pvf_A          103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCI  179 (334)
T ss_dssp             BCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred             EeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence            78889999999999999999999999999986542               378999999999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcC
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSN  613 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~P  613 (702)
                      ||||||+||+++.++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.|
T Consensus       180 H~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p  259 (334)
T 2pvf_A          180 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP  259 (334)
T ss_dssp             CSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             CCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999876543321 1233456788999999988889999999999999999999 9999


Q ss_pred             CcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          614 FEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       614 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      |....  ..  ..    ......+..     ...+......+.+++.+||+.||++|||++|+++.|+++..
T Consensus       260 ~~~~~--~~--~~----~~~~~~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          260 YPGIP--VE--EL----FKLLKEGHR-----MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             STTCC--HH--HH----HHHHHHTCC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCcCC--HH--HH----HHHHhcCCC-----CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            96431  11  11    111111111     11223345678899999999999999999999999998754

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.97  E-value=9e-32  Score=285.34  Aligned_cols=194  Identities=21%  Similarity=0.303  Sum_probs=152.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC-
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD-  548 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~-  548 (702)
                      |++++.++++++..++||||+++|+|.+++... ...+++.+++.++.||+.||+|||++   +|+||||||+||+++. 
T Consensus        91 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~  167 (327)
T 3lm5_A           91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSI  167 (327)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCB
T ss_pred             EEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecC
Confidence            788889999999999999999999999998654 34689999999999999999999999   9999999999999987 


Q ss_pred             --CCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          549 --SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       549 --~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                        ++.+||+|||++........  .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....   ....
T Consensus       168 ~~~~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~  242 (327)
T 3lm5_A          168 YPLGDIKIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN---QETY  242 (327)
T ss_dssp             TTBCCEEECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHH
T ss_pred             CCCCcEEEeeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---hHHH
Confidence              78999999999987643322  3345789999999999999999999999999999999999999965411   1111


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ..     ......  .............+.+++.+||+.||++|||++|+++.
T Consensus       243 ~~-----i~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          243 LN-----ISQVNV--DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             HH-----HHHTCC--CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             HH-----HHhccc--ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence            10     011000  01111223345678899999999999999999999874

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.97  E-value=1.1e-31  Score=277.70  Aligned_cols=216  Identities=22%  Similarity=0.301  Sum_probs=170.0

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +.++..+.||+|++  ||++....  ..+|+|                              |+++++++.+++..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   88 (279)
T 3fdn_A            9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   88 (279)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEE
Confidence            34555678888877  77776543  345554                              788899999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++....... 
T Consensus        89 e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~-  163 (279)
T 3fdn_A           89 EYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-  163 (279)
T ss_dssp             CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred             ecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCccc-
Confidence            9999999999997654 689999999999999999999999   99999999999999999999999999986543222 


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                        .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||.....   ...     ........      ...+
T Consensus       164 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~-----~~~~~~~~------~~~~  227 (279)
T 3fdn_A          164 --RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY---QET-----YKRISRVE------FTFP  227 (279)
T ss_dssp             ------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH---HHH-----HHHHHHTC------CCCC
T ss_pred             --ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH---HHH-----HHHHHhCC------CCCC
Confidence              2345689999999999988999999999999999999999999964311   111     11111111      1122


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ....+.+.+++.+||+.||++|||++|+++.
T Consensus       228 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          228 DFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            2345678899999999999999999999974

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.7e-31  Score=279.14  Aligned_cols=190  Identities=20%  Similarity=0.276  Sum_probs=149.5

Q ss_pred             eeeEEEEEec--CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          471 ISSLLVYKHR--SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       471 i~~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      |+++++++.+  ++..++||||+++++|.+++..  ..+++.++..++.||+.||+|||++   +|+||||||+||+++.
T Consensus        98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~  172 (298)
T 2zv2_A           98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGE  172 (298)
T ss_dssp             BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECT
T ss_pred             CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECC
Confidence            6677777765  6789999999999999987643  3689999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCceeeceeccccccCcccccCCC---CCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL---ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                      ++.+||+|||++....... .......||+.|+|||.+.+..   ++.++||||||+++|||++|+.||....    ...
T Consensus       173 ~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~  247 (298)
T 2zv2_A          173 DGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER----IMC  247 (298)
T ss_dssp             TSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS----HHH
T ss_pred             CCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc----HHH
Confidence            9999999999998764332 2234567999999999987654   4788999999999999999999996431    111


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .    ...........    ......++.+.+++.+||+.||++|||++|+++
T Consensus       248 ~----~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          248 L----HSKIKSQALEF----PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             H----HHHHHHCCCCC----CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             H----HHHHhcccCCC----CCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            1    11111111111    111234567899999999999999999999875

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.97  E-value=2.7e-31  Score=294.90  Aligned_cols=216  Identities=23%  Similarity=0.320  Sum_probs=173.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      ..+...+.||+|++  ||++....  ..||+|                              |+++++++.+.+..++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            34455677888887  77776542  555655                              888899999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++....... 
T Consensus        96 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~-  170 (476)
T 2y94_A           96 EYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-  170 (476)
T ss_dssp             ECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC-
T ss_pred             eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc-
Confidence            9999999999997654 799999999999999999999999   99999999999999999999999999998764432 


Q ss_pred             ceeeceeccccccCcccccCCCC-CccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLI-TVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                       ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||......   .     ....+..+..      ..
T Consensus       171 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~---~-----~~~~i~~~~~------~~  235 (476)
T 2y94_A          171 -FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP---T-----LFKKICDGIF------YT  235 (476)
T ss_dssp             -CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH---H-----HHHHHHTTCC------CC
T ss_pred             -cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH---H-----HHHHHhcCCc------CC
Confidence             2345679999999999987765 78999999999999999999999754211   1     1111122111      11


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      +......+.+++.+||+.||++|||++|+++
T Consensus       236 p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          236 PQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            2223457889999999999999999999997

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=1.2e-31  Score=283.41  Aligned_cols=192  Identities=23%  Similarity=0.300  Sum_probs=155.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++.+++..++||||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        77 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~  152 (321)
T 2a2a_A           77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKN  152 (321)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTT
T ss_pred             cceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCC
Confidence            7788899999999999999999999999997654 689999999999999999999999   999999999999999888


Q ss_pred             ----cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          551 ----RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       551 ----~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                          .+||+|||++........  .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||.....   ....
T Consensus       153 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~  227 (321)
T 2a2a_A          153 IPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK---QETL  227 (321)
T ss_dssp             SSSCCEEECCCTTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH---HHHH
T ss_pred             CCcCCEEEccCccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH---HHHH
Confidence                799999999987644322  3345689999999999988999999999999999999999999964311   1111


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                           ........  ..........+..+.+++.+||+.||++|||++|+++
T Consensus       228 -----~~i~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          228 -----ANITSVSY--DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             -----HHHHTTCC--CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             -----HHHHhccc--ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                 11111110  0111111223567889999999999999999999987

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.97  E-value=5e-32  Score=285.25  Aligned_cols=199  Identities=27%  Similarity=0.368  Sum_probs=159.3

Q ss_pred             eeeEEEEEecC-CeeEEEEecCCCCCHHHHhhcCCCC---------------CCHHHHHHHHHHHHHHHHhhhhcCCCCe
Q 038002          471 ISSLLVYKHRS-SKKLLVYEFMSKGSLADLLFNLETR---------------PLWRDRVRIALDVARGLLYLHDECEVQI  534 (702)
Q Consensus       471 i~~l~~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~---------------~~~~~~~~i~~qi~~aL~~LH~~~~~~i  534 (702)
                      |+++++++... ...++||||+++++|.+++......               +++.++..++.||+.||+|||++   +|
T Consensus        93 iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i  169 (316)
T 2xir_A           93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KC  169 (316)
T ss_dssp             BCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred             eeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence            77788776654 5699999999999999999876432               78999999999999999999999   99


Q ss_pred             EecCCCCCcEEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCc
Q 038002          535 IHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRS  612 (702)
Q Consensus       535 vH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~  612 (702)
                      +||||||+||+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|||++ |..
T Consensus       170 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~  249 (316)
T 2xir_A          170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS  249 (316)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999876544332 2345678899999999988899999999999999999998 999


Q ss_pred             CCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          613 NFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       613 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ||.......  . .    ......+..     ...+......+.+++.+||+.||++|||++|+++.|+.+.
T Consensus       250 p~~~~~~~~--~-~----~~~~~~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  309 (316)
T 2xir_A          250 PYPGVKIDE--E-F----CRRLKEGTR-----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  309 (316)
T ss_dssp             SSTTCCCSH--H-H----HHHHHHTCC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCcccchhH--H-H----HHHhccCcc-----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            997542211  1 1    111111111     1112234567889999999999999999999999998754

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.1e-31  Score=280.15  Aligned_cols=224  Identities=22%  Similarity=0.350  Sum_probs=173.1

Q ss_pred             cccceEEEeEE--EEEeeeeh-----hhhHhh----------------------------eeeEEEEEecCCee-EEEEe
Q 038002          446 NDKRKLLTVLA--GCLGSITF-----LCFLIA----------------------------ISSLLVYKHRSSKK-LLVYE  489 (702)
Q Consensus       446 ~~~~~l~~g~~--v~~~~~~~-----~~~avk----------------------------i~~l~~~~~~~~~~-~lV~e  489 (702)
                      +..+.||+|++  ||++....     ..+|+|                            |+++++++.+.+.. ++|||
T Consensus        24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e  103 (298)
T 3pls_A           24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLP  103 (298)
T ss_dssp             EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEC
T ss_pred             ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEe
Confidence            34578899887  88776422     235554                            77888888766555 99999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC-
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT-  568 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-  568 (702)
                      |+.+++|.+++......+++.++..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++........ 
T Consensus       104 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  180 (298)
T 3pls_A          104 YMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY  180 (298)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG
T ss_pred             cccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc
Confidence            9999999999988766789999999999999999999999   999999999999999999999999999986543221 


Q ss_pred             --ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          569 --GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       569 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                        .......+++.|+|||.+.+..++.++||||||+++|+|++|..|+.......+   .....    ....     ...
T Consensus       181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~---~~~~~----~~~~-----~~~  248 (298)
T 3pls_A          181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD---LTHFL----AQGR-----RLP  248 (298)
T ss_dssp             CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG---HHHHH----HTTC-----CCC
T ss_pred             ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH---HHHHh----hcCC-----CCC
Confidence              122345678899999999999999999999999999999996666543322111   11111    1111     011


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .+...++.+.+++.+||+.||++|||+++++++|+.+.
T Consensus       249 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~  286 (298)
T 3pls_A          249 QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV  286 (298)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            12234567889999999999999999999999998853

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.97  E-value=6.7e-32  Score=288.32  Aligned_cols=192  Identities=22%  Similarity=0.323  Sum_probs=146.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++.+++..++||| +.+++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++ ++
T Consensus        71 iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~  144 (343)
T 3dbq_A           71 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DG  144 (343)
T ss_dssp             BCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TT
T ss_pred             eEEEeeeEeeCCEEEEEEe-CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CC
Confidence            7888999999999999999 56889999998764 789999999999999999999999   999999999999997 57


Q ss_pred             cEEEecccceeecCCCCCc-eeeceeccccccCcccccC-----------CCCCccccccchhHhHHHhhhCCcCCcCCC
Q 038002          551 RAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNS-----------GLITVKSDVYSFGVVLLEIICCRSNFEVNV  618 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlGvil~elltG~~Pf~~~~  618 (702)
                      .+||+|||++......... ......||+.|+|||++.+           ..++.++||||||+++|||++|+.||....
T Consensus       145 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  224 (343)
T 3dbq_A          145 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  224 (343)
T ss_dssp             EEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             cEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh
Confidence            8999999999876443322 2335679999999998854           678899999999999999999999996431


Q ss_pred             CCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          619 STADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .   ....    ..........    ...+......+.+++.+||+.||++|||++|+++.
T Consensus       225 ~---~~~~----~~~~~~~~~~----~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          225 N---QISK----LHAIIDPNHE----IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             S---HHHH----HHHHHCTTSC----CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             h---HHHH----HHHHhcCCcc----cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            1   1110    0111111111    11122224578899999999999999999999874

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.97  E-value=1.5e-31  Score=282.65  Aligned_cols=228  Identities=25%  Similarity=0.368  Sum_probs=178.3

Q ss_pred             cccccccceEEEeEE--EEEeeee-------hhhhHhh----------------------------eeeEEEEEecCCee
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSIT-------FLCFLIA----------------------------ISSLLVYKHRSSKK  484 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~-------~~~~avk----------------------------i~~l~~~~~~~~~~  484 (702)
                      .+.+...+.||+|++  ||++...       ...||+|                            |+++++++.+++..
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  103 (322)
T 1p4o_A           24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT  103 (322)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence            345566778898887  8876543       1345554                            88889999999999


Q ss_pred             EEEEecCCCCCHHHHhhcCC---------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEe
Q 038002          485 LLVYEFMSKGSLADLLFNLE---------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS  555 (702)
Q Consensus       485 ~lV~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~  555 (702)
                      ++||||+++|+|.+++....         ..+++.+++.++.||+.||+|||++   +|+||||||+||+++.++.+||+
T Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~  180 (322)
T 1p4o_A          104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG  180 (322)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEEC
T ss_pred             EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEEC
Confidence            99999999999999997532         3468999999999999999999999   99999999999999999999999


Q ss_pred             cccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHh
Q 038002          556 DFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNC  633 (702)
Q Consensus       556 Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~  633 (702)
                      |||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....    ...    ....
T Consensus       181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~----~~~----~~~~  252 (322)
T 1p4o_A          181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS----NEQ----VLRF  252 (322)
T ss_dssp             CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC----HHH----HHHH
T ss_pred             cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC----HHH----HHHH
Confidence            99999865332221 1223457889999999988899999999999999999999 899996431    111    1111


Q ss_pred             hhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          634 FVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       634 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ...+...     ..+...+..+.+++.+||+.||++|||++|+++.|++...
T Consensus       253 ~~~~~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          253 VMEGGLL-----DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             HHTTCCC-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHcCCcC-----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            1111111     1123345678899999999999999999999999998644

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.97  E-value=7.5e-32  Score=285.16  Aligned_cols=228  Identities=22%  Similarity=0.329  Sum_probs=165.9

Q ss_pred             cccccccceEEEeEE--EEEeeeehh-----hhHhh-----------------------------eeeEEEEEecCCee-
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITFL-----CFLIA-----------------------------ISSLLVYKHRSSKK-  484 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~~-----~~avk-----------------------------i~~l~~~~~~~~~~-  484 (702)
                      .+.++..+.||+|++  ||++.....     .||+|                             |+++++++...+.. 
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  101 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG  101 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence            345666788999987  888875541     46666                             67777777766655 


Q ss_pred             -----EEEEecCCCCCHHHHhhcCC-----CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEE
Q 038002          485 -----LLVYEFMSKGSLADLLFNLE-----TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKI  554 (702)
Q Consensus       485 -----~lV~e~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl  554 (702)
                           ++||||+++|+|.+++....     ..+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||
T Consensus       102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl  178 (323)
T 3qup_A          102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV  178 (323)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred             CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence                 99999999999999996432     2488999999999999999999999   9999999999999999999999


Q ss_pred             ecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHH
Q 038002          555 SDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYN  632 (702)
Q Consensus       555 ~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~  632 (702)
                      +|||++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......    ..    ..
T Consensus       179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~----~~  250 (323)
T 3qup_A          179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA----EI----YN  250 (323)
T ss_dssp             CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GH----HH
T ss_pred             eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH----HH----HH
Confidence            99999987643332 12233456788999999998899999999999999999999 99999754211    11    11


Q ss_pred             hhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          633 CFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       633 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ....+..     ...+...++.+.+++.+||+.||++|||+.++++.|+++..
T Consensus       251 ~~~~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          251 YLIGGNR-----LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             HHHTTCC-----CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHhcCCC-----CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            1111111     11223345678999999999999999999999999998643

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.97  E-value=1.3e-31  Score=285.21  Aligned_cols=183  Identities=22%  Similarity=0.219  Sum_probs=153.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCC-CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKG-SLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS  549 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  549 (702)
                      |+++++++.+++..++||||+.+| +|.+++.... .+++..+..++.||+.||+|||++   +|+||||||+||+++.+
T Consensus        91 Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~  166 (335)
T 3dls_A           91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAED  166 (335)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred             EeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCC
Confidence            788899999999999999999777 9999998765 699999999999999999999999   99999999999999999


Q ss_pred             CcEEEecccceeecCCCCCceeeceeccccccCcccccCCCC-CccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          550 WRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLI-TVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       550 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      +.+||+|||++........  .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.....    .    
T Consensus       167 ~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~----  236 (335)
T 3dls_A          167 FTIKLIDFGSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----T----  236 (335)
T ss_dssp             SCEEECCCTTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----G----
T ss_pred             CcEEEeecccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----H----
Confidence            9999999999987644332  334678999999999887776 8899999999999999999999963210    0    


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                            ....    .  ..+...+..+.+++.+||+.||++|||++|+++.
T Consensus       237 ------~~~~----~--~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          237 ------VEAA----I--HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             ------TTTC----C--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             ------Hhhc----c--CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                  0000    0  0111235678899999999999999999999985

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.97  E-value=1.8e-31  Score=276.41  Aligned_cols=223  Identities=18%  Similarity=0.209  Sum_probs=172.5

Q ss_pred             ccccccceEEEeEE--EEEeeee--hhhhHhh-----------------------eeeEEEEEec---------------
Q 038002          443 DKVNDKRKLLTVLA--GCLGSIT--FLCFLIA-----------------------ISSLLVYKHR---------------  480 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~--~~~~avk-----------------------i~~l~~~~~~---------------  480 (702)
                      ..++..+.||+|++  ||++...  ...||+|                       |+++++++..               
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~   90 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS   90 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CC
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccccc
Confidence            34445566777766  7776654  2555655                       6666666543               


Q ss_pred             -CCeeEEEEecCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEeccc
Q 038002          481 -SSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFG  558 (702)
Q Consensus       481 -~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg  558 (702)
                       ....++||||+++++|.+++... ...+++..+..++.||+.||+|||++   +|+|+||||+||+++.++.+||+|||
T Consensus        91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg  167 (284)
T 2a19_B           91 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFG  167 (284)
T ss_dssp             EEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCT
T ss_pred             CcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEEECcch
Confidence             56689999999999999999754 24689999999999999999999999   99999999999999999999999999


Q ss_pred             ceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccc
Q 038002          559 LAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGE  638 (702)
Q Consensus       559 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  638 (702)
                      ++........  .....|++.|+|||.+.+..++.++||||||+++|||++|..|+...      .    ..........
T Consensus       168 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------~----~~~~~~~~~~  235 (284)
T 2a19_B          168 LVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET------S----KFFTDLRDGI  235 (284)
T ss_dssp             TCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH------H----HHHHHHHTTC
T ss_pred             hheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH------H----HHHHHhhccc
Confidence            9987654332  23456899999999999889999999999999999999999887421      0    0111111111


Q ss_pred             cccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCCC
Q 038002          639 FNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPI  688 (702)
Q Consensus       639 ~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~~  688 (702)
                      +        +......+.+++.+||+.||++|||+.|+++.|+.+..-+.
T Consensus       236 ~--------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          236 I--------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             C--------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred             c--------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence            1        12234567889999999999999999999999998765443

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=9.7e-32  Score=290.20  Aligned_cols=224  Identities=22%  Similarity=0.366  Sum_probs=164.6

Q ss_pred             ccccceEEEeEE--EEEeeeeh-----hhhHhh----------------------------eeeEEEEE-ecCCeeEEEE
Q 038002          445 VNDKRKLLTVLA--GCLGSITF-----LCFLIA----------------------------ISSLLVYK-HRSSKKLLVY  488 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~-----~~~avk----------------------------i~~l~~~~-~~~~~~~lV~  488 (702)
                      ++..+.||+|++  ||++....     ..+|+|                            |+++++++ ..++..++||
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            344567888887  88776532     234554                            77777764 5567899999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+++|+|.+++......+++.++..++.||++||+|||++   +|+||||||+||+++.++.+||+|||+++.......
T Consensus       171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  247 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  247 (373)
T ss_dssp             ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccccc
Confidence            99999999999988776789999999999999999999999   999999999999999999999999999986643321


Q ss_pred             c---eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          569 G---IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       569 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      .   ......+++.|+|||.+.+..++.++||||||+++|||++ |..||.......  .  ...    ...+..     
T Consensus       248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~--~~~----~~~~~~-----  314 (373)
T 3c1x_A          248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--I--TVY----LLQGRR-----  314 (373)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--H--HHH----HHTTCC-----
T ss_pred             ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--H--HHH----HHcCCC-----
Confidence            1   1233457789999999998999999999999999999999 677775432211  1  111    111111     


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ...+...+..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus       315 ~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~  354 (373)
T 3c1x_A          315 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  354 (373)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            0112233567889999999999999999999999998854

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.97  E-value=1.3e-31  Score=284.19  Aligned_cols=189  Identities=19%  Similarity=0.214  Sum_probs=150.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++..++.++..|+||||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus        83 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~  158 (327)
T 3a62_A           83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQG  158 (327)
T ss_dssp             BCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTS
T ss_pred             ccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCC
Confidence            7788889999999999999999999999997654 688999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV  630 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~  630 (702)
                      .+||+|||+++...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.....   ....    
T Consensus       159 ~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~----  230 (327)
T 3a62_A          159 HVKLTDFGLCKESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR---KKTI----  230 (327)
T ss_dssp             CEEECCCSCC-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHH----
T ss_pred             cEEEEeCCcccccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH---HHHH----
Confidence            99999999997543222 123345789999999999988999999999999999999999999964311   1111    


Q ss_pred             HHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038002          631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVIL  678 (702)
Q Consensus       631 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~  678 (702)
                       ..+.....      ..+......+.+++.+||+.||++||     +++|+++
T Consensus       231 -~~i~~~~~------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          231 -DKILKCKL------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             -HHHHHTCC------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             -HHHHhCCC------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence             11111111      12233456788999999999999999     7778876

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.1e-31  Score=279.14  Aligned_cols=197  Identities=22%  Similarity=0.279  Sum_probs=160.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++ ..+..++||||+++++|.+++......+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        72 i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~  147 (287)
T 1u59_A           72 IVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRH  147 (287)
T ss_dssp             BCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETT
T ss_pred             EeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCC
Confidence            78888887 45679999999999999999987766799999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCce--eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGI--VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~  627 (702)
                      .+||+|||++..........  .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......    ...
T Consensus       148 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~  223 (287)
T 1u59_A          148 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP----EVM  223 (287)
T ss_dssp             EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH----HHH
T ss_pred             CEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH----HHH
Confidence            99999999998775443321  223446889999999988889999999999999999998 99999654211    111


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                          .....+..     ...+...+..+.+++.+||+.||++||+++++++.|+.+.
T Consensus       224 ----~~i~~~~~-----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  271 (287)
T 1u59_A          224 ----AFIEQGKR-----MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  271 (287)
T ss_dssp             ----HHHHTTCC-----CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----HHHhcCCc-----CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                11111111     1223345678899999999999999999999999998753

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.3e-31  Score=281.60  Aligned_cols=231  Identities=19%  Similarity=0.160  Sum_probs=166.6

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      .++..++||+|++  ||++....  ..||+|                             |+++++++.+++..++||||
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (311)
T 4agu_A            4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY   83 (311)
T ss_dssp             CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEe
Confidence            3455667788776  77766542  445555                             88899999999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      +++++|.+++.... .+++..+..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++........ .
T Consensus        84 ~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~  158 (311)
T 4agu_A           84 CDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD-Y  158 (311)
T ss_dssp             CSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             CCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-c
Confidence            99999999887654 689999999999999999999999   999999999999999999999999999987643322 2


Q ss_pred             eeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHH-------Hhhhccccc--
Q 038002          571 VAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVY-------NCFVAGEFN--  640 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~--  640 (702)
                      .....||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||.................       .........  
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (311)
T 4agu_A          159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG  238 (311)
T ss_dssp             -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred             cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence            334568999999998865 6789999999999999999999999975421111111100000       000000000  


Q ss_pred             -ccccc-------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          641 -KLVEE-------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       641 -~~~~~-------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                       ...+.       ......+..+.+++.+||+.||++|||++|+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence             00000       0112345678899999999999999999999864

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.97  E-value=5.6e-32  Score=287.39  Aligned_cols=198  Identities=26%  Similarity=0.403  Sum_probs=159.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcC-------------CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEec
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNL-------------ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHC  537 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~-------------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~  537 (702)
                      |+++++++.+++..++||||+++|+|.+++...             ...+++.+++.++.||+.||+|||++   +|+||
T Consensus       112 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~  188 (333)
T 2i1m_A          112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHR  188 (333)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred             eeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccC
Confidence            888999999999999999999999999999753             23578999999999999999999999   99999


Q ss_pred             CCCCCcEEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCc
Q 038002          538 DIKLRNILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFE  615 (702)
Q Consensus       538 dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~  615 (702)
                      ||||+||+++.++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||.
T Consensus       189 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~  268 (333)
T 2i1m_A          189 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP  268 (333)
T ss_dssp             CCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred             CcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCc
Confidence            99999999999999999999999876443322 2334567889999999988899999999999999999998 999997


Q ss_pred             CCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          616 VNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      ......   ........    . .    ....+...+..+.+++.+||+.||++|||++||+++|+.+
T Consensus       269 ~~~~~~---~~~~~~~~----~-~----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  324 (333)
T 2i1m_A          269 GILVNS---KFYKLVKD----G-Y----QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ  324 (333)
T ss_dssp             TCCSSH---HHHHHHHH----T-C----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccchhH---HHHHHHhc----C-C----CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence            542221   11111111    1 0    1111222356788999999999999999999999999864

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.97  E-value=9.9e-32  Score=283.34  Aligned_cols=229  Identities=20%  Similarity=0.199  Sum_probs=170.9

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEe----cCCeeEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKH----RSSKKLLV  487 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~----~~~~~~lV  487 (702)
                      ..++..+.||+|++  ||++....  ..||+|                           |+++++++.    .....++|
T Consensus        29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  108 (317)
T 2buj_A           29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL  108 (317)
T ss_dssp             EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred             eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence            34556678888887  77776532  566666                           667776665    45688999


Q ss_pred             EecCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecC
Q 038002          488 YEFMSKGSLADLLFN---LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLM  564 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~  564 (702)
                      |||+++++|.+++..   ....+++.+++.++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++....
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~  185 (317)
T 2buj_A          109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC  185 (317)
T ss_dssp             EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred             EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence            999999999999976   344689999999999999999999999   99999999999999999999999999987653


Q ss_pred             CCCCc--------eeeceeccccccCcccccCCC---CCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHh
Q 038002          565 PNQTG--------IVAGVRGSRGYMAPEWQNSGL---ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNC  633 (702)
Q Consensus       565 ~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~  633 (702)
                      .....        ......||+.|+|||.+....   ++.++||||||+++|||++|+.||...........  . .   
T Consensus       186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~--~-~---  259 (317)
T 2buj_A          186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA--L-A---  259 (317)
T ss_dssp             EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHH--H-H---
T ss_pred             cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhh--H-H---
Confidence            21110        012245699999999887543   68899999999999999999999964211111110  0 0   


Q ss_pred             hhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          634 FVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       634 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ... ..    ........+..+.+++.+||+.||++|||++++++.|+.+..
T Consensus       260 ~~~-~~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          260 VQN-QL----SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             HHC-C------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             hhc-cC----CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence            000 00    011122345678999999999999999999999999998764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.97  E-value=2e-31  Score=275.30  Aligned_cols=219  Identities=19%  Similarity=0.170  Sum_probs=170.4

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      +.+...+.||+|++  ||++....  ..+|+|                           |++++.++.+++..++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            44555677888876  77776543  344444                           888999999999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE---eCCCcEEEecccceeecCCCCC
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ++++|.+++.... .+++.++..++.|++.||+|||++   +|+||||||+||++   +.++.+||+|||++....... 
T Consensus        89 ~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~-  163 (277)
T 3f3z_A           89 TGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-  163 (277)
T ss_dssp             CSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS-
T ss_pred             CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc-
Confidence            9999999987654 689999999999999999999999   99999999999999   788999999999998764433 


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                       ......||+.|+|||.+.+. ++.++||||||+++|||++|+.||....   ....     ......+....  .....
T Consensus       164 -~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~---~~~~-----~~~~~~~~~~~--~~~~~  231 (277)
T 3f3z_A          164 -MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT---DSEV-----MLKIREGTFTF--PEKDW  231 (277)
T ss_dssp             -CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS---HHHH-----HHHHHHCCCCC--CHHHH
T ss_pred             -chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC---HHHH-----HHHHHhCCCCC--Cchhh
Confidence             23445689999999988654 8999999999999999999999996531   1111     11111111110  00000


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ...++.+.+++.+||+.||++|||+.|+++
T Consensus       232 ~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          232 LNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             hcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            123567889999999999999999999986

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.97  E-value=1.5e-31  Score=290.62  Aligned_cols=192  Identities=23%  Similarity=0.319  Sum_probs=147.7

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++..++..|+||| +.+++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++ ++
T Consensus       118 iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~  191 (390)
T 2zmd_A          118 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DG  191 (390)
T ss_dssp             BCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SS
T ss_pred             EEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CC
Confidence            7888899999999999999 56889999998765 788999999999999999999999   999999999999995 58


Q ss_pred             cEEEecccceeecCCCCCc-eeeceeccccccCcccccC-----------CCCCccccccchhHhHHHhhhCCcCCcCCC
Q 038002          551 RAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNS-----------GLITVKSDVYSFGVVLLEIICCRSNFEVNV  618 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlGvil~elltG~~Pf~~~~  618 (702)
                      .+||+|||++..+...... ......||+.|+|||++.+           ..++.++|||||||++|||++|+.||....
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~  271 (390)
T 2zmd_A          192 MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  271 (390)
T ss_dssp             CEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             eEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh
Confidence            9999999999876443322 2335679999999998864           468899999999999999999999996431


Q ss_pred             CCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          619 STADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ..  ...+     ..........    ..+......+.+++.+||+.||++|||++|+++.
T Consensus       272 ~~--~~~~-----~~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          272 NQ--ISKL-----HAIIDPNHEI----EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             CH--HHHH-----HHHHCTTSCC----CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HH--HHHH-----HHHhCccccC----CCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            11  0111     1111111111    1111224578899999999999999999999864

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.97  E-value=1.8e-31  Score=280.48  Aligned_cols=230  Identities=18%  Similarity=0.243  Sum_probs=167.3

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      ..++..+.||+|++  ||++....  ..||+|                              |++++.++..++..++||
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            34555677888877  77776432  445554                              788888999999999999


Q ss_pred             ecCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCC
Q 038002          489 EFMSKGSLADLLFN---LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP  565 (702)
Q Consensus       489 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~  565 (702)
                      ||+++++|.+++..   ....+++.+++.++.||+.||+|||++   +|+|+||||+||+++.++.+||+|||++.....
T Consensus       112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~  188 (310)
T 2wqm_A          112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  188 (310)
T ss_dssp             ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred             ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence            99999999999864   344689999999999999999999999   999999999999999999999999999986543


Q ss_pred             CCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccc
Q 038002          566 NQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE  645 (702)
Q Consensus       566 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  645 (702)
                      ... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.......  ...    .............  
T Consensus       189 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~----~~~~~~~~~~~~~--  259 (310)
T 2wqm_A          189 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL--YSL----CKKIEQCDYPPLP--  259 (310)
T ss_dssp             -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH--HHH----HHHHHTTCSCCCC--
T ss_pred             CCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH--HHH----HHHhhcccCCCCc--
Confidence            222 2234568999999999998899999999999999999999999996542111  111    1111111111111  


Q ss_pred             ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCC
Q 038002          646 EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEI  686 (702)
Q Consensus       646 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~  686 (702)
                        .......+.+++.+||+.||++|||+++|++.|+.+...
T Consensus       260 --~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~  298 (310)
T 2wqm_A          260 --SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC  298 (310)
T ss_dssp             --TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence              123456788999999999999999999999999987543

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.97  E-value=2.1e-31  Score=277.45  Aligned_cols=196  Identities=25%  Similarity=0.299  Sum_probs=157.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++ ..+..++||||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        80 i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~  154 (291)
T 1xbb_A           80 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQH  154 (291)
T ss_dssp             BCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred             EEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCC
Confidence            77788777 5677899999999999999998754 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCcee--eceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIV--AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~  627 (702)
                      .+||+|||++...........  ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....    ... 
T Consensus       155 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~-  229 (291)
T 1xbb_A          155 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG----SEV-  229 (291)
T ss_dssp             EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHH-
T ss_pred             cEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH----HHH-
Confidence            999999999987754433221  22346788999999988889999999999999999999 9999965311    111 


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                         ......+..     ...+...+..+.+++.+||+.||++||++++++++|+++.
T Consensus       230 ---~~~~~~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  278 (291)
T 1xbb_A          230 ---TAMLEKGER-----MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  278 (291)
T ss_dssp             ---HHHHHTTCC-----CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             ---HHHHHcCCC-----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence               111111111     1223345668999999999999999999999999998753

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=2.8e-31  Score=288.45  Aligned_cols=226  Identities=20%  Similarity=0.224  Sum_probs=160.7

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecC--CeeEEE
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRS--SKKLLV  487 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~--~~~~lV  487 (702)
                      .++..+.||+|++  ||++....  ..||+|                              |++++.++..+  ...|+|
T Consensus        10 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv   89 (388)
T 3oz6_A           10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLV   89 (388)
T ss_dssp             TEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEE
T ss_pred             ceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEE
Confidence            4555677888877  77776543  556655                              77888877643  478999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |||++ ++|.+++...  .+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.+....
T Consensus        90 ~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  163 (388)
T 3oz6_A           90 FDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR  163 (388)
T ss_dssp             EECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred             ecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence            99997 5999999763  689999999999999999999999   99999999999999999999999999998753211


Q ss_pred             --------------------CceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          568 --------------------TGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       568 --------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                                          ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .  +
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~--~  240 (388)
T 3oz6_A          164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN-Q--L  240 (388)
T ss_dssp             CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-H--H
T ss_pred             cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH-H--H
Confidence                                112334679999999998876 678999999999999999999999997542111 1  1


Q ss_pred             HHHHHHhhhcc-----------------------------cccccccc--------ccCHHHHHHHHHHHHHcccCCCCC
Q 038002          627 STWVYNCFVAG-----------------------------EFNKLVEE--------EVDKITLERMVKTGLLCIQDEPNL  669 (702)
Q Consensus       627 ~~~~~~~~~~~-----------------------------~~~~~~~~--------~~~~~~~~~l~~li~~cL~~dP~~  669 (702)
                      .. +.......                             .....+..        .......+.+.+++.+||+.||++
T Consensus       241 ~~-i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~  319 (388)
T 3oz6_A          241 ER-IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK  319 (388)
T ss_dssp             HH-HHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred             HH-HHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence            00 10000000                             00000000        000123567899999999999999


Q ss_pred             CCCHHHHHHH
Q 038002          670 RPSMKNVILM  679 (702)
Q Consensus       670 RPt~~evl~~  679 (702)
                      |||++|+++.
T Consensus       320 R~t~~e~l~H  329 (388)
T 3oz6_A          320 RISANDALKH  329 (388)
T ss_dssp             SCCHHHHTTS
T ss_pred             CCCHHHHhCC
Confidence            9999999876

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.97  E-value=5.5e-32  Score=306.01  Aligned_cols=228  Identities=27%  Similarity=0.342  Sum_probs=178.6

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      +.++..++||+|.|  ||++.... ..||||                          |+++++++.+ +..+|||||+++
T Consensus       267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~  345 (535)
T 2h8h_A          267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK  345 (535)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred             hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcC
Confidence            44555678999988  88887655 456766                          7888887765 779999999999


Q ss_pred             CCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceee
Q 038002          494 GSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA  572 (702)
Q Consensus       494 gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  572 (702)
                      |+|.+++... ...+++.+++.++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++...........
T Consensus       346 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  422 (535)
T 2h8h_A          346 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ  422 (535)
T ss_dssp             EEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTC
T ss_pred             CcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceeccc
Confidence            9999999753 23589999999999999999999999   9999999999999999999999999999865432211122


Q ss_pred             ceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHH
Q 038002          573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT  651 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  651 (702)
                      ...++..|+|||.+....++.++||||||+++|||++ |+.||.....  .+      ....+..+.     ....+...
T Consensus       423 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--~~------~~~~i~~~~-----~~~~~~~~  489 (535)
T 2h8h_A          423 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--RE------VLDQVERGY-----RMPCPPEC  489 (535)
T ss_dssp             STTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--HH------HHHHHHTTC-----CCCCCTTC
T ss_pred             CCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HH------HHHHHHcCC-----CCCCCCCC
Confidence            3446788999999988899999999999999999999 9999964311  11      111111111     11122344


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCC
Q 038002          652 LERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP  687 (702)
Q Consensus       652 ~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~  687 (702)
                      .+.+.++|.+||+.||++|||+++|+++|+.+..-.
T Consensus       490 ~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          490 PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  525 (535)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence            567889999999999999999999999999976533

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.97  E-value=1.6e-31  Score=283.22  Aligned_cols=196  Identities=29%  Similarity=0.366  Sum_probs=157.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQII  535 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  535 (702)
                      |+++++++.+++..++||||+++++|.+++....               ..+++.+++.++.||+.||+|||++   +|+
T Consensus        88 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~iv  164 (327)
T 1fvr_A           88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFI  164 (327)
T ss_dssp             BCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred             hhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence            7888899999999999999999999999997653               3689999999999999999999999   999


Q ss_pred             ecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCC
Q 038002          536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNF  614 (702)
Q Consensus       536 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf  614 (702)
                      ||||||+||+++.++.+||+|||++.......  ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||
T Consensus       165 H~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf  242 (327)
T 1fvr_A          165 HRDLAARNILVGENYVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY  242 (327)
T ss_dssp             CSCCSGGGEEECGGGCEEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             CCCCccceEEEcCCCeEEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCC
Confidence            99999999999999999999999997432111  1223456889999999988889999999999999999998 99999


Q ss_pred             cCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          615 EVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .....    ..    .......+     .....+......+.+++.+||+.||++|||++|+++.|+.+.
T Consensus       243 ~~~~~----~~----~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  299 (327)
T 1fvr_A          243 CGMTC----AE----LYEKLPQG-----YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  299 (327)
T ss_dssp             TTCCH----HH----HHHHGGGT-----CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCcH----HH----HHHHhhcC-----CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            65411    11    11111111     111122334567899999999999999999999999998754

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.97  E-value=3.7e-31  Score=274.52  Aligned_cols=215  Identities=21%  Similarity=0.221  Sum_probs=172.8

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +.++..+.||+|++  ||++....  ..+|+|                              |+++++++.+++..++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            44556678888876  77776543  344444                              788899999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+|+||||+||+++.++.+||+|||++....... 
T Consensus        94 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-  168 (284)
T 2vgo_A           94 EFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-  168 (284)
T ss_dssp             CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC-
T ss_pred             EeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcccc-
Confidence            9999999999997654 689999999999999999999999   99999999999999999999999999997654322 


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                        .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||.....   ...     ........      ...+
T Consensus       169 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~-----~~~~~~~~------~~~~  232 (284)
T 2vgo_A          169 --RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH---TET-----HRRIVNVD------LKFP  232 (284)
T ss_dssp             --BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH---HHH-----HHHHHTTC------CCCC
T ss_pred             --cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH---hHH-----HHHHhccc------cCCC
Confidence              2345689999999999988999999999999999999999999964311   111     11111111      1122


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ...+..+.+++.+||+.||++||+++|+++
T Consensus       233 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          233 PFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            334567889999999999999999999987

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.97  E-value=6.8e-31  Score=278.56  Aligned_cols=227  Identities=19%  Similarity=0.218  Sum_probs=171.2

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------eeeEEEEEec--CCeeEEEEecC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------ISSLLVYKHR--SSKKLLVYEFM  491 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------i~~l~~~~~~--~~~~~lV~e~~  491 (702)
                      +.++..+.||+|++  ||++....  ..||+|                         |++++.++.+  ....++||||+
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~  115 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV  115 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEecc
Confidence            45566678888887  88776533  566666                         7778888877  77899999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC-cEEEecccceeecCCCCCce
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW-RAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      ++++|.+++.    .+++.++..++.||+.||+|||++   +|+||||||+|||++.++ .+||+|||++........  
T Consensus       116 ~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--  186 (330)
T 3nsz_A          116 NNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--  186 (330)
T ss_dssp             CCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC--
T ss_pred             CchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc--
Confidence            9999999985    478999999999999999999999   999999999999999777 899999999987644332  


Q ss_pred             eeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH------HHHhh---------
Q 038002          571 VAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW------VYNCF---------  634 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~------~~~~~---------  634 (702)
                      .....+++.|+|||.+.+ ..++.++||||||+++|||++|+.||.......+.......      .....         
T Consensus       187 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  266 (330)
T 3nsz_A          187 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP  266 (330)
T ss_dssp             CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCT
T ss_pred             cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccccc
Confidence            334568999999998876 67899999999999999999999999654222111110000      00000         


Q ss_pred             ---------hccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          635 ---------VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       635 ---------~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                               ....+............+..+.+++.+||+.||++|||++|+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             chhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                     00011111111222234678999999999999999999999987

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.97  E-value=1.1e-31  Score=284.90  Aligned_cols=228  Identities=18%  Similarity=0.139  Sum_probs=166.1

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      .+.++..++||+|++  ||++....  ..||+|                             |++++.++.+++..++||
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  112 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF  112 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence            355667788999987  88876443  556666                             788889999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe-----CCCcEEEecccceeec
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID-----DSWRAKISDFGLAKLL  563 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~-----~~~~~kl~Dfg~a~~~  563 (702)
                      ||+++ +|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++...
T Consensus       113 e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~  187 (329)
T 3gbz_A          113 EYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF  187 (329)
T ss_dssp             ECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred             ecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence            99985 9999998765 689999999999999999999999   999999999999994     4556999999999876


Q ss_pred             CCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhh--hcc---
Q 038002          564 MPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF--VAG---  637 (702)
Q Consensus       564 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~--~~~---  637 (702)
                      ..... ......+|+.|+|||++.+. .++.++||||||+++|||++|+.||......   ..+........  ...   
T Consensus       188 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~  263 (329)
T 3gbz_A          188 GIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI---DQLFKIFEVLGLPDDTTWP  263 (329)
T ss_dssp             C------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCCCCTTTST
T ss_pred             CCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH---HHHHHHHHHhCCCchhhhh
Confidence            43322 23345689999999988764 5899999999999999999999999654211   11111110000  000   


Q ss_pred             ----------cccccccc----ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          638 ----------EFNKLVEE----EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       638 ----------~~~~~~~~----~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                                ........    .......+.+.+++.+||+.||++|||++|+++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence                      00000000    111224567889999999999999999999986

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.97  E-value=3.4e-31  Score=303.99  Aligned_cols=218  Identities=22%  Similarity=0.243  Sum_probs=170.7

Q ss_pred             ceEEEeEE--EEEeeeeh----hhhHhh----------------------------eeeEEEEEecCCeeEEEEecCCCC
Q 038002          449 RKLLTVLA--GCLGSITF----LCFLIA----------------------------ISSLLVYKHRSSKKLLVYEFMSKG  494 (702)
Q Consensus       449 ~~l~~g~~--v~~~~~~~----~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~~~~g  494 (702)
                      .+||+|+|  ||++....    ..||||                            |+++++++.. +..++||||+++|
T Consensus       342 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g  420 (613)
T 2ozo_A          342 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG  420 (613)
T ss_dssp             EEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred             cEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence            36899988  88876542    446666                            8888888876 5699999999999


Q ss_pred             CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce--ee
Q 038002          495 SLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI--VA  572 (702)
Q Consensus       495 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~--~~  572 (702)
                      +|.+++......+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.........  ..
T Consensus       421 ~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~  497 (613)
T 2ozo_A          421 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS  497 (613)
T ss_dssp             BHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred             cHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeecc
Confidence            99999987766799999999999999999999999   99999999999999999999999999998764332211  12


Q ss_pred             ceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHH
Q 038002          573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT  651 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  651 (702)
                      ...+++.|+|||++.+..++.++|||||||++|||++ |+.||......  +  .    ...+..+..     ...+...
T Consensus       498 ~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~--~----~~~i~~~~~-----~~~p~~~  564 (613)
T 2ozo_A          498 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--E--V----MAFIEQGKR-----MECPPEC  564 (613)
T ss_dssp             ----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--H--H----HHHHHTTCC-----CCCCTTC
T ss_pred             CCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--H--H----HHHHHcCCC-----CCCCCcC
Confidence            2345688999999998899999999999999999998 99999754211  1  1    111111111     1223345


Q ss_pred             HHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          652 LERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       652 ~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      +..+.++|.+||+.||++||++++|+++|+..
T Consensus       565 ~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          565 PPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             CHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            67889999999999999999999999999874

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.97  E-value=4.3e-31  Score=272.53  Aligned_cols=193  Identities=23%  Similarity=0.299  Sum_probs=154.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++.+++..++||||+++++|.+++.... .+++.++..++.|++.||+|||++   +|+|+||||+||+++.++
T Consensus        67 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~  142 (276)
T 2yex_A           67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERD  142 (276)
T ss_dssp             BCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTC
T ss_pred             ceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCC
Confidence            7888899999999999999999999999997543 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCC-CccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH
Q 038002          551 RAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLI-TVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST  628 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~  628 (702)
                      .+||+|||++........ .......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||........  ....
T Consensus       143 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~  220 (276)
T 2yex_A          143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSD  220 (276)
T ss_dssp             CEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH--HHHH
T ss_pred             CEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH--HHHH
Confidence            999999999986543221 22334668999999999887665 7899999999999999999999975422211  1111


Q ss_pred             HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          629 WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       629 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      +     ......  .  .........+.+++.+||+.||++|||++|+++
T Consensus       221 ~-----~~~~~~--~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          221 W-----KEKKTY--L--NPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             H-----HTTCTT--S--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             h-----hhcccc--c--CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            1     111000  0  011233567889999999999999999999986

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=2.6e-31  Score=283.54  Aligned_cols=223  Identities=20%  Similarity=0.130  Sum_probs=165.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------------eeeEEEEEecCCeeEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------------i~~l~~~~~~~~~~~l  486 (702)
                      ..++..+.||+|++  ||++....  ..+|+|                                |+++++++.+++..++
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  105 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL  105 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEE
Confidence            44556678888887  77775432  344444                                7889999999999999


Q ss_pred             EEecCCCCCHHHHhhcC---------------------------------------CCCCCHHHHHHHHHHHHHHHHhhh
Q 038002          487 VYEFMSKGSLADLLFNL---------------------------------------ETRPLWRDRVRIALDVARGLLYLH  527 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~---------------------------------------~~~~~~~~~~~i~~qi~~aL~~LH  527 (702)
                      ||||+++|+|.+++...                                       ...+++..+..++.||+.||+|||
T Consensus       106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH  185 (345)
T 3hko_A          106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH  185 (345)
T ss_dssp             EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998521                                       001356778889999999999999


Q ss_pred             hcCCCCeEecCCCCCcEEEeCCC--cEEEecccceeecCCCCC---ceeeceeccccccCcccccC--CCCCccccccch
Q 038002          528 DECEVQIIHCDIKLRNILIDDSW--RAKISDFGLAKLLMPNQT---GIVAGVRGSRGYMAPEWQNS--GLITVKSDVYSF  600 (702)
Q Consensus       528 ~~~~~~ivH~dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSl  600 (702)
                      ++   +|+||||||+||+++.++  .+||+|||++..+.....   .......||+.|+|||.+.+  ..++.++|||||
T Consensus       186 ~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl  262 (345)
T 3hko_A          186 NQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA  262 (345)
T ss_dssp             HT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred             HC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence            99   999999999999998776  899999999987643221   12345679999999998865  678899999999


Q ss_pred             hHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          601 GVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       601 Gvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      |+++|||++|+.||.....   ......     .......  ............+.+++.+||+.||++||++.|+++
T Consensus       263 G~il~el~~g~~pf~~~~~---~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          263 GVLLHLLLMGAVPFPGVND---ADTISQ-----VLNKKLC--FENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             HHHHHHHHHSSCSSCCSSH---HHHHHH-----HHHCCCC--TTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCCh---HHHHHH-----HHhcccc--cCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            9999999999999964411   111111     1111110  011111224567889999999999999999999987

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.97  E-value=1.2e-30  Score=277.12  Aligned_cols=229  Identities=17%  Similarity=0.153  Sum_probs=173.0

Q ss_pred             cccccccceEEEeEE--EEEeeee---hhhhHhh--------------------------------eeeEEEEEecCCee
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSIT---FLCFLIA--------------------------------ISSLLVYKHRSSKK  484 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~---~~~~avk--------------------------------i~~l~~~~~~~~~~  484 (702)
                      .+.++..+.||+|++  ||++...   ...||+|                                +++++.+++.++..
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~   92 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI   92 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence            455667788899887  8877652   2556665                                56778889999999


Q ss_pred             EEEEecCCCCCHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC---------------
Q 038002          485 LLVYEFMSKGSLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD---------------  548 (702)
Q Consensus       485 ~lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~---------------  548 (702)
                      ++||||+ +++|.+++..... .+++.++..++.||+.||+|||++   +|+||||||+||+++.               
T Consensus        93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~  168 (339)
T 1z57_A           93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDE  168 (339)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred             EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccccc
Confidence            9999999 8899999987643 588999999999999999999999   9999999999999987               


Q ss_pred             ----CCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          549 ----SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       549 ----~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                          ++.+||+|||++......    .....||+.|+|||.+.+..++.++||||||+++|||++|+.||..........
T Consensus       169 ~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  244 (339)
T 1z57_A          169 RTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA  244 (339)
T ss_dssp             EEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHH
T ss_pred             ccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence                668999999999875332    234568999999999998899999999999999999999999997542111000


Q ss_pred             hhHHHH-------HHhhhccc----------------------cccccc-cccCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 038002          625 LLSTWV-------YNCFVAGE----------------------FNKLVE-EEVDKITLERMVKTGLLCIQDEPNLRPSMK  674 (702)
Q Consensus       625 ~~~~~~-------~~~~~~~~----------------------~~~~~~-~~~~~~~~~~l~~li~~cL~~dP~~RPt~~  674 (702)
                      ......       ........                      ...... ........+.+.+++.+||+.||++|||++
T Consensus       245 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~  324 (339)
T 1z57_A          245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLR  324 (339)
T ss_dssp             HHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHH
Confidence            000000       00000000                      000000 012345678899999999999999999999


Q ss_pred             HHHH
Q 038002          675 NVIL  678 (702)
Q Consensus       675 evl~  678 (702)
                      |+++
T Consensus       325 ell~  328 (339)
T 1z57_A          325 EALK  328 (339)
T ss_dssp             HHTT
T ss_pred             HHhc
Confidence            9985

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=1.9e-31  Score=285.25  Aligned_cols=214  Identities=24%  Similarity=0.257  Sum_probs=167.9

Q ss_pred             ccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEec
Q 038002          445 VNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      +...+.||+|++  ||++....  ..||+|                              |+++++++.+++..++||||
T Consensus        56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  135 (348)
T 1u5q_A           56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY  135 (348)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEec
Confidence            445567888877  77776432  455555                              78888999999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      +. |+|.+++......+++.++..++.|+++||+|||++   +|+||||||+|||++.++.+||+|||++......    
T Consensus       136 ~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~----  207 (348)
T 1u5q_A          136 CL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----  207 (348)
T ss_dssp             CS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB----
T ss_pred             CC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC----
Confidence            97 688888876555799999999999999999999999   9999999999999999999999999999865322    


Q ss_pred             eeceeccccccCccccc---CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          571 VAGVRGSRGYMAPEWQN---SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                       ....||+.|+|||++.   ...++.++||||||+++|||++|+.||.....   ...    ... ..........    
T Consensus       208 -~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~---~~~----~~~-~~~~~~~~~~----  274 (348)
T 1u5q_A          208 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSA----LYH-IAQNESPALQ----  274 (348)
T ss_dssp             -CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHH----HHH-HHHSCCCCCC----
T ss_pred             -CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh---HHH----HHH-HHhcCCCCCC----
Confidence             2356899999999874   56789999999999999999999999964311   111    111 1111111111    


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ....++.+.+++.+||+.||++|||++++++.
T Consensus       275 ~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          275 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             CCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            22335678899999999999999999999864

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.97  E-value=2.1e-31  Score=280.93  Aligned_cols=200  Identities=20%  Similarity=0.233  Sum_probs=153.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++.+++..++||||+++++|.+++......+++.++..++.||+.||+|||++   +|+||||||+||+++ ++
T Consensus        91 iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~  166 (319)
T 2y4i_B           91 VVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NG  166 (319)
T ss_dssp             BCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---
T ss_pred             EeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CC
Confidence            78888899999999999999999999999988766799999999999999999999999   999999999999998 67


Q ss_pred             cEEEecccceeecCCCC----CceeeceeccccccCcccccC---------CCCCccccccchhHhHHHhhhCCcCCcCC
Q 038002          551 RAKISDFGLAKLLMPNQ----TGIVAGVRGSRGYMAPEWQNS---------GLITVKSDVYSFGVVLLEIICCRSNFEVN  617 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DiwSlGvil~elltG~~Pf~~~  617 (702)
                      .+||+|||++.......    ........|++.|+|||.+..         ..++.++||||||+++|||++|+.||...
T Consensus       167 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  246 (319)
T 2y4i_B          167 KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ  246 (319)
T ss_dssp             CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC
T ss_pred             CEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999987653211    112233558999999998764         45789999999999999999999999643


Q ss_pred             CCCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCC
Q 038002          618 VSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEI  686 (702)
Q Consensus       618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~  686 (702)
                      ..   ...     ......+......    ....+..+.+++.+||+.||++|||+++++++|+.+.+.
T Consensus       247 ~~---~~~-----~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          247 PA---EAI-----IWQMGTGMKPNLS----QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             CH---HHH-----HHHHHTTCCCCCC----CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             CH---HHH-----HHHhccCCCCCCC----cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            11   111     1111111111111    112345688999999999999999999999999997654

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.97  E-value=1.8e-30  Score=281.49  Aligned_cols=169  Identities=26%  Similarity=0.235  Sum_probs=141.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------------eeeEEEEEecCCeeEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------------i~~l~~~~~~~~~~~l  486 (702)
                      +.++..+.||+|++  ||++....  ..||||                                |+++..++..++..++
T Consensus        54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  133 (382)
T 2vx3_A           54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCL  133 (382)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEE
T ss_pred             eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEE
Confidence            45566778999987  88886543  456665                                6677788889999999


Q ss_pred             EEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe--CCCcEEEecccceeec
Q 038002          487 VYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID--DSWRAKISDFGLAKLL  563 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~--~~~~~kl~Dfg~a~~~  563 (702)
                      ||||++ ++|.+++.... ..+++..+..++.||+.||+|||.+ ..+|+||||||+|||++  .++.+||+|||++...
T Consensus       134 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~  211 (382)
T 2vx3_A          134 VFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL  211 (382)
T ss_dssp             EEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred             EEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence            999996 49999998764 3589999999999999999999942 12999999999999994  5778999999999876


Q ss_pred             CCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCC
Q 038002          564 MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVN  617 (702)
Q Consensus       564 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~  617 (702)
                      ...    .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       212 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          212 GQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             TCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            432    23456899999999999989999999999999999999999999754

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.97  E-value=1.1e-30  Score=287.47  Aligned_cols=167  Identities=21%  Similarity=0.179  Sum_probs=144.1

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------------eeeEEEEEecCCeeEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------------i~~l~~~~~~~~~~~l  486 (702)
                      ..++..+.||+|+|  ||++....  ..||||                                |++++..+...+..++
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  176 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM  176 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred             CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence            34666789999988  88886554  566666                                6777888999999999


Q ss_pred             EEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCc--EEEecccceeec
Q 038002          487 VYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWR--AKISDFGLAKLL  563 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~--~kl~Dfg~a~~~  563 (702)
                      ||||+. ++|.+++.... ..+++..+..++.||+.||+|||++   +|+||||||+|||++.++.  +||+|||++...
T Consensus       177 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~  252 (429)
T 3kvw_A          177 TFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE  252 (429)
T ss_dssp             EECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred             EEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence            999996 59999988764 3489999999999999999999999   9999999999999999887  999999999765


Q ss_pred             CCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCC
Q 038002          564 MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVN  617 (702)
Q Consensus       564 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~  617 (702)
                      ...    .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       253 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          253 HQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             TCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence            322    23456899999999999989999999999999999999999999754

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.97  E-value=6.2e-31  Score=273.18  Aligned_cols=219  Identities=24%  Similarity=0.256  Sum_probs=164.1

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      +.+...++||+|++  ||++....  ..+|+|                            |+++++++.+.+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            45556678888877  77766543  444544                            88899999999999999999


Q ss_pred             CCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE---eCCCcEEEecccceeecC
Q 038002          491 MSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLM  564 (702)
Q Consensus       491 ~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~  564 (702)
                      +++++|.+++...   ...+++..+..++.||+.||+|||++   +|+||||||+||++   +.++.+||+|||++....
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            9999999998643   34689999999999999999999999   99999999999999   456789999999998654


Q ss_pred             CCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          565 PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       565 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      ...  ......|++.|+|||.+. ..++.++||||||+++|||++|+.||.....  .+  .....  ........  . 
T Consensus       179 ~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~--~~--~~~~~--~~~~~~~~--~-  246 (285)
T 3is5_A          179 SDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL--EE--VQQKA--TYKEPNYA--V-  246 (285)
T ss_dssp             ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HH--HHHHH--HHCCCCCC--C-
T ss_pred             Ccc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH--HH--HHhhh--ccCCcccc--c-
Confidence            332  234456899999999876 5688999999999999999999999965311  11  10000  00011100  0 


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                        ......+.+.+++.+||+.||++|||++|+++
T Consensus       247 --~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          247 --ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             ----CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             --ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence              01113467889999999999999999999985

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.97  E-value=2.6e-31  Score=277.84  Aligned_cols=229  Identities=22%  Similarity=0.253  Sum_probs=162.9

Q ss_pred             ccccccceEEEeEE--EEEeeee--hhhhHhh----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          443 DKVNDKRKLLTVLA--GCLGSIT--FLCFLIA----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~--~~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      +.++..+.||+|++  ||++...  ...||+|                            |+++++++..++..++||||
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   94 (303)
T 2vwi_A           15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL   94 (303)
T ss_dssp             CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred             hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence            44455566777766  6666543  2445554                            77888889999999999999


Q ss_pred             CCCCCHHHHhhc-------CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          491 MSKGSLADLLFN-------LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       491 ~~~gsL~~~l~~-------~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                      +++++|.+++..       ....+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++...
T Consensus        95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A           95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFL  171 (303)
T ss_dssp             CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred             ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence            999999999974       233589999999999999999999999   9999999999999999999999999999765


Q ss_pred             CCCCC----ceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccc
Q 038002          564 MPNQT----GIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGE  638 (702)
Q Consensus       564 ~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  638 (702)
                      .....    .......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||.......  . .. ..........
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~-~~-~~~~~~~~~~  247 (303)
T 2vwi_A          172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK--V-LM-LTLQNDPPSL  247 (303)
T ss_dssp             C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG--H-HH-HHHTSSCCCT
T ss_pred             ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh--H-HH-HHhccCCCcc
Confidence            43221    11234568999999998865 568999999999999999999999997542111  1 00 0000000000


Q ss_pred             cccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          639 FNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       639 ~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ................+.+++.+||+.||++||+++|+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            0001111222234567889999999999999999999986

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.97  E-value=2e-31  Score=277.27  Aligned_cols=199  Identities=23%  Similarity=0.247  Sum_probs=157.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++..++ .++||||+++++|.+++......+++.++..++.||+.||+|||++   +|+|+||||+||+++.++
T Consensus        83 i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~  158 (291)
T 1u46_A           83 LIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRD  158 (291)
T ss_dssp             BCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETT
T ss_pred             cccEEEEEccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCC
Confidence            778888877655 8999999999999999987655789999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCce--eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGI--VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~  627 (702)
                      .+||+|||++..........  .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||.....   ...  
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~--  233 (291)
T 1u46_A          159 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG---SQI--  233 (291)
T ss_dssp             EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHH--
T ss_pred             CEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH---HHH--
Confidence            99999999998775443221  223457788999999988889999999999999999999 9999964411   111  


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                         ..........    ...+...+..+.+++.+||+.||++|||++++++.|+++..
T Consensus       234 ---~~~~~~~~~~----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          234 ---LHKIDKEGER----LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             ---HHHHHTSCCC----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             ---HHHHHccCCC----CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence               1111111111    11223345678999999999999999999999999988653

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.97  E-value=1.2e-31  Score=277.30  Aligned_cols=222  Identities=24%  Similarity=0.254  Sum_probs=169.0

Q ss_pred             ccccccceEEEeEE--EEEeeeehhhhHhh-------------------------eeeEEEEEe-cCCeeEEEEecCCCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITFLCFLIA-------------------------ISSLLVYKH-RSSKKLLVYEFMSKG  494 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~~~~avk-------------------------i~~l~~~~~-~~~~~~lV~e~~~~g  494 (702)
                      +.++..+.||+|++  ||++......+|+|                         |+++++++. .++..++||||++++
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~  100 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG  100 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTE
T ss_pred             hhceEEeEEecCCCceEEEEEEcCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCC
Confidence            44556678888887  88877666667776                         777777654 456899999999999


Q ss_pred             CHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeec
Q 038002          495 SLADLLFNLET-RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG  573 (702)
Q Consensus       495 sL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  573 (702)
                      +|.+++..... .+++.++..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++.......    ..
T Consensus       101 ~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----~~  173 (278)
T 1byg_A          101 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DT  173 (278)
T ss_dssp             EHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC--------------
T ss_pred             CHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc----cC
Confidence            99999976532 278999999999999999999999   99999999999999999999999999987653322    23


Q ss_pred             eeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHH
Q 038002          574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL  652 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  652 (702)
                      ..+++.|+|||.+.+..++.++||||||+++|||++ |+.||......  + .     ......+.     ....+...+
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~-~-----~~~~~~~~-----~~~~~~~~~  240 (278)
T 1byg_A          174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--D-V-----VPRVEKGY-----KMDAPDGCP  240 (278)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--G-H-----HHHHTTTC-----CCCCCTTCC
T ss_pred             CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--H-H-----HHHHhcCC-----CCCCcccCC
Confidence            357889999999988899999999999999999998 99999654111  1 1     11111111     112233445


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          653 ERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       653 ~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ..+.+++.+||+.||++||+++|+++.|+.+.
T Consensus       241 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~  272 (278)
T 1byg_A          241 PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  272 (278)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence            68899999999999999999999999998764

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.97  E-value=1.1e-30  Score=283.86  Aligned_cols=230  Identities=20%  Similarity=0.171  Sum_probs=170.8

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------------eeeEEEEEe----
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------------ISSLLVYKH----  479 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------------i~~l~~~~~----  479 (702)
                      ..+++..++||+|++  ||++....  ..||+|                                  |++++..+.    
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            455667788999987  88886543  456665                                  556677666    


Q ss_pred             cCCeeEEEEecCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC--------
Q 038002          480 RSSKKLLVYEFMSKGSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW--------  550 (702)
Q Consensus       480 ~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~--------  550 (702)
                      ++...++||||+ +++|.+.+... ...+++.+++.++.||+.||+|||+++  +|+||||||+|||++.++        
T Consensus       116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~  192 (397)
T 1wak_A          116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAA  192 (397)
T ss_dssp             TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred             CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhh
Confidence            677999999999 55666655543 356999999999999999999999953  899999999999998775        


Q ss_pred             -----------------------------------------cEEEecccceeecCCCCCceeeceeccccccCcccccCC
Q 038002          551 -----------------------------------------RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG  589 (702)
Q Consensus       551 -----------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  589 (702)
                                                               .+||+|||++......    .....||+.|+|||++.+.
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~~  268 (397)
T 1wak_A          193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIGS  268 (397)
T ss_dssp             HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHTS
T ss_pred             hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcCC
Confidence                                                     7999999999876432    2345689999999999988


Q ss_pred             CCCccccccchhHhHHHhhhCCcCCcCCCCCcch--hhhHHHHHHhhh--------ccc-----------ccc-------
Q 038002          590 LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE--VLLSTWVYNCFV--------AGE-----------FNK-------  641 (702)
Q Consensus       590 ~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~--~~~~~~~~~~~~--------~~~-----------~~~-------  641 (702)
                      .++.++|||||||++|||++|+.||.........  ............        .+.           +..       
T Consensus       269 ~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (397)
T 1wak_A          269 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPW  348 (397)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCC
T ss_pred             CCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCc
Confidence            9999999999999999999999999765322211  000000100000        000           000       


Q ss_pred             ----ccc--cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          642 ----LVE--EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       642 ----~~~--~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                          .+.  ...+......+.+|+.+||+.||++|||++|+++
T Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          349 GLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             chhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                000  0235677889999999999999999999999986

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.97  E-value=2.7e-31  Score=275.33  Aligned_cols=213  Identities=19%  Similarity=0.238  Sum_probs=167.8

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      ...++..+.||+|++  ||++....  ..||+|                              |+++++++.+++..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            445556678888876  77776642  556655                              78888999999999999


Q ss_pred             EecCCCCCHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC----------------
Q 038002          488 YEFMSKGSLADLLFNLE---TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD----------------  548 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~----------------  548 (702)
                      |||+++++|.+++....   ..+++.++..++.||+.||+|||++   +|+||||||+||+++.                
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~  166 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW  166 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence            99999999999997642   3689999999999999999999999   9999999999999984                


Q ss_pred             ---CCcEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          549 ---SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       549 ---~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                         ...+||+|||.+.......     ...||+.|+|||.+.+. .++.++||||||+++|||++|..|+...    .  
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~--  235 (289)
T 1x8b_A          167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----D--  235 (289)
T ss_dssp             ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----H--
T ss_pred             cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----h--
Confidence               4479999999998764332     23489999999988765 6678999999999999999999876432    1  


Q ss_pred             hhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .     ......+...     ..+...+..+.+++.+||+.||++|||++|+++
T Consensus       236 ~-----~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          236 Q-----WHEIRQGRLP-----RIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             H-----HHHHHTTCCC-----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             H-----HHHHHcCCCC-----CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            0     1111122111     122234567889999999999999999999986

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.97  E-value=4.8e-31  Score=279.56  Aligned_cols=234  Identities=21%  Similarity=0.240  Sum_probs=175.3

Q ss_pred             ccccccceEEEeEE--EEEeee------ehhhhHhh---------------------------eeeEEEEEecC--CeeE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSI------TFLCFLIA---------------------------ISSLLVYKHRS--SKKL  485 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~------~~~~~avk---------------------------i~~l~~~~~~~--~~~~  485 (702)
                      ..++..+.||+|++  ||++..      ....||+|                           |+++++++...  ...+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            34455678888876  777752      12455555                           77777766554  4789


Q ss_pred             EEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCC
Q 038002          486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP  565 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~  565 (702)
                      +||||+++++|.+++......+++.+++.++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++.....
T Consensus       121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~  197 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ  197 (326)
T ss_dssp             EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred             EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence            99999999999999988766799999999999999999999999   999999999999999999999999999988754


Q ss_pred             CCCce--eeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCC--------CcchhhhHHHHHHhhh
Q 038002          566 NQTGI--VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVS--------TADEVLLSTWVYNCFV  635 (702)
Q Consensus       566 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--------~~~~~~~~~~~~~~~~  635 (702)
                      .....  .....++..|+|||.+.+..++.++||||||+++|||++|..|+.....        ................
T Consensus       198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (326)
T 2w1i_A          198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK  277 (326)
T ss_dssp             SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred             cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence            43221  1234567789999999888899999999999999999999999863200        0000000000111111


Q ss_pred             ccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          636 AGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       636 ~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .+.     ....+...+..+.+++.+||+.||++|||++||+++|+.+.
T Consensus       278 ~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~  321 (326)
T 2w1i_A          278 NNG-----RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  321 (326)
T ss_dssp             TTC-----CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCC-----CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            111     11123344578899999999999999999999999998753

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.97  E-value=1.7e-30  Score=279.76  Aligned_cols=192  Identities=24%  Similarity=0.364  Sum_probs=152.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++.+++..+..++||||+++++|.+++.... .+++..+..++.||+.||+|||+.   ||+|+||||+||+++.++
T Consensus       162 iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~  237 (365)
T 2y7j_A          162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNM  237 (365)
T ss_dssp             BCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTC
T ss_pred             EeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCC
Confidence            6777888999999999999999999999997654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccC------CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS------GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      .+||+|||++..+.....  .....||+.|+|||++.+      ..++.++||||||+++|||++|+.||....    ..
T Consensus       238 ~ikl~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~----~~  311 (365)
T 2y7j_A          238 QIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR----QI  311 (365)
T ss_dssp             CEEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS----HH
T ss_pred             CEEEEecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC----HH
Confidence            999999999987654332  345679999999998753      357899999999999999999999996431    11


Q ss_pred             hhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ...    .....+..... .+ .....+..+.+++.+||+.||++|||++|+++
T Consensus       312 ~~~----~~i~~~~~~~~-~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          312 LML----RMIMEGQYQFS-SP-EWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             HHH----HHHHHTCCCCC-HH-HHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHH----HHHHhCCCCCC-Cc-ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            111    11111111100 00 00123456889999999999999999999986

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.97  E-value=3e-31  Score=274.78  Aligned_cols=192  Identities=24%  Similarity=0.322  Sum_probs=151.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++.+++..++||||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+|+||||+||+++.++
T Consensus        70 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~  145 (283)
T 3bhy_A           70 IITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKN  145 (283)
T ss_dssp             BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSS
T ss_pred             eeehhheecCCCeEEEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCC
Confidence            7888899999999999999999999999997644 689999999999999999999999   999999999999998877


Q ss_pred             ----cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          551 ----RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       551 ----~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                          .+||+|||++........  .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||....   .....
T Consensus       146 ~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~  220 (283)
T 3bhy_A          146 VPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET---KQETL  220 (283)
T ss_dssp             SSSCCEEECCCTTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS---HHHHH
T ss_pred             CCCCceEEEecccceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc---hHHHH
Confidence                899999999987643322  234568999999999998899999999999999999999999996531   11111


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                           ........  ..........+..+.+++.+||+.||++||+++|+++
T Consensus       221 -----~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          221 -----TNISAVNY--DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             -----HHHHTTCC--CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -----HHhHhccc--CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence                 11111110  0011111223567889999999999999999999997

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=4.8e-31  Score=282.47  Aligned_cols=204  Identities=19%  Similarity=0.242  Sum_probs=150.5

Q ss_pred             eeeEEEEEec--------CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCC
Q 038002          471 ISSLLVYKHR--------SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR  542 (702)
Q Consensus       471 i~~l~~~~~~--------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~  542 (702)
                      |+++++++..        ++..++||||+++ +|.+.+......+++.++..++.||+.||+|||++   +|+||||||+
T Consensus        78 iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~  153 (351)
T 3mi9_A           78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAA  153 (351)
T ss_dssp             BCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGG
T ss_pred             cccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHH
Confidence            7777777765        5678999999975 88888877766799999999999999999999999   9999999999


Q ss_pred             cEEEeCCCcEEEecccceeecCCCC---CceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCC
Q 038002          543 NILIDDSWRAKISDFGLAKLLMPNQ---TGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNV  618 (702)
Q Consensus       543 NIll~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~  618 (702)
                      ||+++.++.+||+|||++..+....   ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||....
T Consensus       154 NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  233 (351)
T 3mi9_A          154 NVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT  233 (351)
T ss_dssp             GEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             HEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999998764322   122344678999999998865 568999999999999999999999997542


Q ss_pred             CCcchhhhHHHHHHhhhccccccc-----------ccc---ccC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          619 STADEVLLSTWVYNCFVAGEFNKL-----------VEE---EVD-----KITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       619 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~---~~~-----~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ... ................+...           ...   ...     ......+.+++.+||+.||++|||++|+++.
T Consensus       234 ~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          234 EQH-QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             HHH-HHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hHH-HHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            111 11000000000000000000           000   000     0113568899999999999999999999874

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.97  E-value=3.7e-31  Score=281.60  Aligned_cols=217  Identities=20%  Similarity=0.239  Sum_probs=172.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      ..+...+.||+|++  ||++....  ..+|+|                              |+++++++.+++..++||
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  120 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL  120 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            44556678888877  77765432  333333                              888999999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++........
T Consensus       121 e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  196 (335)
T 2owb_A          121 ELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE  196 (335)
T ss_dssp             CCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             ecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence            9999999999987654 789999999999999999999999   999999999999999999999999999987643322


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                       ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.....   ...     .........      ..+
T Consensus       197 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~-----~~~~~~~~~------~~~  261 (335)
T 2owb_A          197 -RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---KET-----YLRIKKNEY------SIP  261 (335)
T ss_dssp             -CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH---HHH-----HHHHHHTCC------CCC
T ss_pred             -cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH---HHH-----HHHHhcCCC------CCC
Confidence             23345689999999999888899999999999999999999999964311   111     111111111      112


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ......+.+++.+||+.||++||+++|+++
T Consensus       262 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          262 KHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            233457888999999999999999999997

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.97  E-value=3e-31  Score=305.24  Aligned_cols=218  Identities=24%  Similarity=0.264  Sum_probs=169.7

Q ss_pred             cceEEEeEE--EEEeeeeh----hhhHhh-----------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          448 KRKLLTVLA--GCLGSITF----LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       448 ~~~l~~g~~--v~~~~~~~----~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      .++||+|+|  ||++....    ..||||                             |++++++++. +..++||||++
T Consensus       374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~  452 (635)
T 4fl3_A          374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE  452 (635)
T ss_dssp             EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred             CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence            357999988  88885431    456655                             7888888864 56899999999


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC--ce
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT--GI  570 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~--~~  570 (702)
                      +|+|.+++.... .+++.+++.++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.+.....  ..
T Consensus       453 ~g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~  528 (635)
T 4fl3_A          453 LGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA  528 (635)
T ss_dssp             TEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred             CCCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence            999999997654 789999999999999999999999   999999999999999999999999999987654332  12


Q ss_pred             eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCH
Q 038002          571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK  649 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (702)
                      .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....    ..    ....+..+..     ...+.
T Consensus       529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~----~~----~~~~i~~~~~-----~~~p~  595 (635)
T 4fl3_A          529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG----SE----VTAMLEKGER-----MGCPA  595 (635)
T ss_dssp             ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HH----HHHHHHTTCC-----CCCCT
T ss_pred             ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH----HH----HHHHHHcCCC-----CCCCC
Confidence            233456788999999998899999999999999999998 9999965411    11    1111111111     12233


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          650 ITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      ..+..+.++|.+||+.||++||++++|+++|+..
T Consensus       596 ~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  629 (635)
T 4fl3_A          596 GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  629 (635)
T ss_dssp             TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            4457889999999999999999999999999864

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.97  E-value=5.7e-31  Score=292.32  Aligned_cols=228  Identities=21%  Similarity=0.204  Sum_probs=162.4

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecC------Ce
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRS------SK  483 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~------~~  483 (702)
                      +.++..+.||+|++  ||++....  ..||+|                             |+++++++...      .+
T Consensus        62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~  141 (464)
T 3ttj_A           62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD  141 (464)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence            34556678888887  77776543  556666                             77777777544      46


Q ss_pred             eEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          484 KLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                      .|+||||+++ +|.+.+..   .+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++..
T Consensus       142 ~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~  214 (464)
T 3ttj_A          142 VYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  214 (464)
T ss_dssp             EEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred             EEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence            7999999976 56666643   488999999999999999999999   9999999999999999999999999999876


Q ss_pred             CCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH-------------
Q 038002          564 MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV-------------  630 (702)
Q Consensus       564 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~-------------  630 (702)
                      ....  ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+....             
T Consensus       215 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~  292 (464)
T 3ttj_A          215 GTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP  292 (464)
T ss_dssp             --CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCH
T ss_pred             CCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcch
Confidence            4322  2345679999999999999999999999999999999999999997542111000000000             


Q ss_pred             -HHhhhcc-------cccccccc-------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          631 -YNCFVAG-------EFNKLVEE-------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       631 -~~~~~~~-------~~~~~~~~-------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                       ...+...       .+......       .........+.+|+.+||+.||++|||++|+++.
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence             0000000       00000000       1122336789999999999999999999999874

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.97  E-value=4.6e-31  Score=275.22  Aligned_cols=219  Identities=20%  Similarity=0.233  Sum_probs=173.8

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      ...+...+.||+|++  ||++....  ..+|+|                              |+++++++.+++..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            345566778888877  77766542  333433                              88889999999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |||+++++|.+++.... .+++.++..++.|++.||+|||++   +|+||||||+||+++.++.+||+|||++.......
T Consensus        94 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  169 (294)
T 2rku_A           94 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG  169 (294)
T ss_dssp             EECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence            99999999999987654 689999999999999999999999   99999999999999999999999999998764332


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                      . ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.....   ...     .........      ..
T Consensus       170 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~-----~~~~~~~~~------~~  234 (294)
T 2rku_A          170 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---KET-----YLRIKKNEY------SI  234 (294)
T ss_dssp             C-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH---HHH-----HHHHHTTCC------CC
T ss_pred             c-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHH-----HHHHhhccC------CC
Confidence            2 23345689999999999888899999999999999999999999965311   111     111111111      11


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      +......+.+++.+||+.||++|||++|+++.
T Consensus       235 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          235 PKHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            22334678899999999999999999999973

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.97  E-value=2.2e-30  Score=269.56  Aligned_cols=216  Identities=24%  Similarity=0.282  Sum_probs=165.9

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEec----CCeeEE
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHR----SSKKLL  486 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~----~~~~~l  486 (702)
                      .++..+.||+|++  ||++....  ..||+|                             |+++++++..    +...++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            3455567888887  88776543  344443                             7777776654    567999


Q ss_pred             EEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCC--eEecCCCCCcEEEe-CCCcEEEecccceeec
Q 038002          487 VYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ--IIHCDIKLRNILID-DSWRAKISDFGLAKLL  563 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivH~dlkp~NIll~-~~~~~kl~Dfg~a~~~  563 (702)
                      ||||+++++|.+++.... .+++..+..++.||+.||+|||++   +  |+|+||||+||+++ .++.+||+|||++...
T Consensus       107 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~  182 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             EEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence            999999999999997654 689999999999999999999999   8  99999999999997 7899999999999754


Q ss_pred             CCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccc
Q 038002          564 MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV  643 (702)
Q Consensus       564 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  643 (702)
                      ....   .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||.......   .    .......+..... 
T Consensus       183 ~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~----~~~~~~~~~~~~~-  250 (290)
T 1t4h_A          183 RASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA---Q----IYRRVTSGVKPAS-  250 (290)
T ss_dssp             CTTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH---H----HHHHHTTTCCCGG-
T ss_pred             cccc---cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH---H----HHHHHhccCCccc-
Confidence            3322   234568999999998764 58999999999999999999999996532111   1    1111111111111 


Q ss_pred             ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          644 EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       644 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                         .+......+.+++.+||+.||++|||++|+++
T Consensus       251 ---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          251 ---FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ---GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ---cCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence               12222357889999999999999999999986

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.97  E-value=5.9e-31  Score=288.74  Aligned_cols=192  Identities=23%  Similarity=0.300  Sum_probs=142.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++. .+..++||||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus       202 iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~  276 (419)
T 3i6u_A          202 IIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQE  276 (419)
T ss_dssp             BCCCCEEEE-SSEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSS
T ss_pred             EeeEEEEEe-cCceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCC
Confidence            666777765 456899999999999999987654 799999999999999999999999   999999999999996544


Q ss_pred             ---cEEEecccceeecCCCCCceeeceeccccccCccccc---CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          551 ---RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN---SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       551 ---~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                         .+||+|||+++.....  .......||+.|+|||++.   ...++.++||||||+++|+|++|+.||........  
T Consensus       277 ~~~~~kl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--  352 (419)
T 3i6u_A          277 EDCLIKITDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--  352 (419)
T ss_dssp             SSCCEEECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--
T ss_pred             CcceEEEeecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--
Confidence               5999999999876432  2234567999999999875   36788999999999999999999999975422211  


Q ss_pred             hhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       ...    ....+....  .+......++.+.+++.+||+.||++|||++|+++
T Consensus       353 -~~~----~i~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          353 -LKD----QITSGKYNF--IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             -HHH----HHHTTCCCC--CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             -HHH----HHhcCCCCC--CchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence             111    111111110  01111223567899999999999999999999987

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.97  E-value=6.4e-31  Score=279.92  Aligned_cols=230  Identities=20%  Similarity=0.199  Sum_probs=153.9

Q ss_pred             ccccc-cceEEEeEE--EEEeeeeh--hhhHhh-----------------------eeeEEEEEec----CCeeEEEEec
Q 038002          443 DKVND-KRKLLTVLA--GCLGSITF--LCFLIA-----------------------ISSLLVYKHR----SSKKLLVYEF  490 (702)
Q Consensus       443 ~~~~~-~~~l~~g~~--v~~~~~~~--~~~avk-----------------------i~~l~~~~~~----~~~~~lV~e~  490 (702)
                      +.+.. ++.||+|++  ||++....  ..||+|                       |++++.++..    +...++||||
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~  107 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMEC  107 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEec
Confidence            44444 346899987  88887763  677877                       6777776665    5668999999


Q ss_pred             CCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC---CCcEEEecccceeecCCC
Q 038002          491 MSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD---SWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       491 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~  566 (702)
                      +++|+|.+++.... ..+++.+++.++.||+.||+|||++   +|+||||||+||+++.   ++.+||+|||++......
T Consensus       108 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~  184 (336)
T 3fhr_A          108 MEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN  184 (336)
T ss_dssp             CTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred             cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecccc
Confidence            99999999998764 3589999999999999999999999   9999999999999976   455999999999865432


Q ss_pred             CCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          567 QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       567 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                      .   .....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||............    .........  .....
T Consensus       185 ~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----~~~~~~~~~--~~~~~  255 (336)
T 3fhr_A          185 A---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM----KRRIRLGQY--GFPNP  255 (336)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------CCCTT
T ss_pred             c---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH----HHhhhcccc--ccCch
Confidence            2   23456899999999998888999999999999999999999999654221110000    000000000  00111


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhCCc
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVIL--MLEGTM  684 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~--~Le~~~  684 (702)
                      .....+..+.+++.+||+.||++|||++|+++  .+....
T Consensus       256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence            11234667889999999999999999999998  444433

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.97  E-value=2.6e-31  Score=285.52  Aligned_cols=226  Identities=22%  Similarity=0.286  Sum_probs=171.3

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCCeeEEEEe
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      .+.+...+.||+|++  ||++....  ..+|+|                            |+++++++.+++..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            345566678888887  88776652  455555                            7888999999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      |+++++|.+++.... .+++..+..++.|++.||+|||+ +   +|+||||||+||+++.++.+||+|||++......  
T Consensus       112 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--  185 (360)
T 3eqc_A          112 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--  185 (360)
T ss_dssp             CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred             CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhC---CEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence            999999999997754 68999999999999999999998 5   8999999999999999999999999998754221  


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHH--------------------
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLST--------------------  628 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~--------------------  628 (702)
                       ......||+.|+|||++.+..++.++||||||+++|||++|+.||..............                    
T Consensus       186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (360)
T 3eqc_A          186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL  264 (360)
T ss_dssp             -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred             -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence             12345689999999999999999999999999999999999999975421110000000                    


Q ss_pred             --------------HHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          629 --------------WVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       629 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                                    ............    .......+..+.+++.+||+.||++|||++|+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          265 NKFGMDSRPPMAIFELLDYIVNEPPP----KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             ---------CCCHHHHHHHHHHSCCC----CCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             cccccCCCCcccchhhhhHHhccCCC----CCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                          000000000000    0111223567899999999999999999999987

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.97  E-value=1.3e-30  Score=271.63  Aligned_cols=217  Identities=25%  Similarity=0.256  Sum_probs=166.4

Q ss_pred             ccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEecCCCCC
Q 038002          447 DKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEFMSKGS  495 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~~~~gs  495 (702)
                      ....||+|++  ||++....  ..||+|                           |+++++++...+..++||||+++++
T Consensus        26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  105 (295)
T 2clq_A           26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGS  105 (295)
T ss_dssp             SBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEE
T ss_pred             CcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCC
Confidence            3456777776  77776533  445555                           8888999999999999999999999


Q ss_pred             HHHHhhcCCC--CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC-CCcEEEecccceeecCCCCCceee
Q 038002          496 LADLLFNLET--RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD-SWRAKISDFGLAKLLMPNQTGIVA  572 (702)
Q Consensus       496 L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~  572 (702)
                      |.+++.....  ..++..+..++.||+.||+|||++   +|+|+||||+||+++. ++.+||+|||++....... ....
T Consensus       106 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-~~~~  181 (295)
T 2clq_A          106 LSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTE  181 (295)
T ss_dssp             HHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------C
T ss_pred             HHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC-Cccc
Confidence            9999987533  356888899999999999999999   9999999999999988 8999999999998764322 1223


Q ss_pred             ceeccccccCcccccCC--CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHH
Q 038002          573 GVRGSRGYMAPEWQNSG--LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI  650 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  650 (702)
                      ...|++.|+|||.+.+.  .++.++||||||+++|+|++|+.||.......  ....    .....     ......+..
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~----~~~~~-----~~~~~~~~~  250 (295)
T 2clq_A          182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ--AAMF----KVGMF-----KVHPEIPES  250 (295)
T ss_dssp             CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH--HHHH----HHHHH-----CCCCCCCTT
T ss_pred             ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh--HHHH----hhccc-----ccccccccc
Confidence            45689999999988654  37899999999999999999999996431111  1000    00000     011122334


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          651 TLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       651 ~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .+..+.+++.+||+.||++||+++|+++
T Consensus       251 ~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          251 MSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             SCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            5668889999999999999999999986

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.97  E-value=2e-30  Score=272.92  Aligned_cols=221  Identities=19%  Similarity=0.214  Sum_probs=171.3

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      +.+...+.||+|++  ||++....  ..||+|                         |+++++.+.+++..++||||+++
T Consensus        29 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (314)
T 3com_A           29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGA  108 (314)
T ss_dssp             -CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             hhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCC
Confidence            44555677888887  88876653  556666                         78888999999999999999999


Q ss_pred             CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeec
Q 038002          494 GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG  573 (702)
Q Consensus       494 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  573 (702)
                      ++|.+++......+++.++..++.||+.||+|||++   +|+|+||||+||+++.++.+||+|||++........ ....
T Consensus       109 ~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~  184 (314)
T 3com_A          109 GSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA-KRNT  184 (314)
T ss_dssp             EEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-CBCC
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-ccCc
Confidence            999999975555799999999999999999999999   999999999999999999999999999987643322 2234


Q ss_pred             eeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHH
Q 038002          574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLE  653 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  653 (702)
                      ..|++.|+|||.+.+..++.++||||||+++|+|++|+.||.....    ...   ... .........   ..+...+.
T Consensus       185 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~---~~~-~~~~~~~~~---~~~~~~~~  253 (314)
T 3com_A          185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP----MRA---IFM-IPTNPPPTF---RKPELWSD  253 (314)
T ss_dssp             CCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH----HHH---HHH-HHHSCCCCC---SSGGGSCH
T ss_pred             cCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh----HHH---HHH-HhcCCCccc---CCcccCCH
Confidence            5689999999999988999999999999999999999999964311    100   000 011110000   11222356


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          654 RMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       654 ~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .+.+++.+||+.||++|||++++++
T Consensus       254 ~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          254 NFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHh
Confidence            7889999999999999999999986

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=6.7e-31  Score=280.90  Aligned_cols=229  Identities=20%  Similarity=0.185  Sum_probs=170.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------------eeeEEEEEecCCeeEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------------i~~l~~~~~~~~~~~l  486 (702)
                      ..+...+.||+|++  ||++....  ..||+|                                |+++++++.+++..++
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   89 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL   89 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred             cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence            34555667777766  77665532  444444                                7788888999999999


Q ss_pred             EEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCC
Q 038002          487 VYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  566 (702)
                      ||||+++ +|.+++......+++.++..++.|+++||+|||++   +|+||||||+||+++.++.+||+|||++......
T Consensus        90 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  165 (346)
T 1ua2_A           90 VFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP  165 (346)
T ss_dssp             EEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred             EEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence            9999986 89999987766789999999999999999999999   9999999999999999999999999999876432


Q ss_pred             CCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhc---cccccc
Q 038002          567 QTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVA---GEFNKL  642 (702)
Q Consensus       567 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  642 (702)
                      . .......+|+.|+|||.+.+ ..++.++||||||+++|||++|..||.....   ...+.. .......   ..+...
T Consensus       166 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~---~~~~~~-i~~~~~~~~~~~~~~~  240 (346)
T 1ua2_A          166 N-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD---LDQLTR-IFETLGTPTEEQWPDM  240 (346)
T ss_dssp             C-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHH-HHHHHCCCCTTTSSST
T ss_pred             c-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH---HHHHHH-HHHHcCCCChhhhhhh
Confidence            2 22344568999999998865 4589999999999999999999999965421   111111 1111000   000000


Q ss_pred             ------cc---------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 038002          643 ------VE---------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILML  680 (702)
Q Consensus       643 ------~~---------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~L  680 (702)
                            +.         ..........+.+++.+||+.||++|||++|+++.-
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~  293 (346)
T 1ua2_A          241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK  293 (346)
T ss_dssp             TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred             ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence                  00         011123457899999999999999999999999854

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.97  E-value=7.9e-31  Score=274.67  Aligned_cols=218  Identities=22%  Similarity=0.263  Sum_probs=173.9

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      +.+...+.||+|++  ||++....  ..||+|                            |+++++.+.+++..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            34555678888887  88876542  556665                            78888899999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      +++++|.+++..  ..+++.++..++.||+.||+|||++   +|+|+||||+||+++.++.+||+|||++........ .
T Consensus       102 ~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~  175 (303)
T 3a7i_A          102 LGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-K  175 (303)
T ss_dssp             CTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-C
T ss_pred             CCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcccc-c
Confidence            999999999965  3689999999999999999999999   999999999999999999999999999987644322 2


Q ss_pred             eeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHH
Q 038002          571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI  650 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  650 (702)
                      .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....    ......    ......     .......
T Consensus       176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~----~~~~~~-----~~~~~~~  242 (303)
T 3a7i_A          176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH----PMKVLF----LIPKNN-----PPTLEGN  242 (303)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHHH----HHHHSC-----CCCCCSS
T ss_pred             cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC----HHHHHH----HhhcCC-----CCCCccc
Confidence            234568999999999998899999999999999999999999996431    111111    111111     1112223


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          651 TLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       651 ~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .+..+.+++.+||+.||++|||++|+++.
T Consensus       243 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          243 YSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             CCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             cCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            45678899999999999999999999874

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.97  E-value=8.9e-31  Score=275.63  Aligned_cols=226  Identities=22%  Similarity=0.279  Sum_probs=165.0

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-----hhhHhh-----------------------------eeeEEEEEecCC----
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-----LCFLIA-----------------------------ISSLLVYKHRSS----  482 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-----~~~avk-----------------------------i~~l~~~~~~~~----  482 (702)
                      ..+...+.||+|++  ||++....     ..||+|                             |+++++++.+.+    
T Consensus        34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~  113 (313)
T 3brb_A           34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI  113 (313)
T ss_dssp             GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred             HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence            34455677888887  77765432     245555                             666777766544    


Q ss_pred             -eeEEEEecCCCCCHHHHhhc-----CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEec
Q 038002          483 -KKLLVYEFMSKGSLADLLFN-----LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISD  556 (702)
Q Consensus       483 -~~~lV~e~~~~gsL~~~l~~-----~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D  556 (702)
                       ..++||||+++++|.+++..     ....+++.+++.++.||++||+|||++   +|+||||||+||+++.++.+||+|
T Consensus       114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~D  190 (313)
T 3brb_A          114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVAD  190 (313)
T ss_dssp             -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECS
T ss_pred             cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEee
Confidence             45999999999999999853     234689999999999999999999999   999999999999999999999999


Q ss_pred             ccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhh
Q 038002          557 FGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCF  634 (702)
Q Consensus       557 fg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~  634 (702)
                      ||++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |..||......  .  ..    ...
T Consensus       191 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~--~~----~~~  262 (313)
T 3brb_A          191 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--E--MY----DYL  262 (313)
T ss_dssp             CSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G--HH----HHH
T ss_pred             cCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--H--HH----HHH
Confidence            999987643322 12233457889999999999999999999999999999999 88999654211  1  11    111


Q ss_pred             hccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       635 ~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ..+..     ...+...+..+.+++.+||+.||++|||+++++++|+.+.
T Consensus       263 ~~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~  307 (313)
T 3brb_A          263 LHGHR-----LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL  307 (313)
T ss_dssp             HTTCC-----CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HcCCC-----CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            11111     1112234567899999999999999999999999998754

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.97  E-value=1.3e-31  Score=277.02  Aligned_cols=197  Identities=21%  Similarity=0.256  Sum_probs=154.3

Q ss_pred             eeeEEEEE--ecCCeeEEEEecCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcCCCC-----eEecCCC
Q 038002          471 ISSLLVYK--HRSSKKLLVYEFMSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDECEVQ-----IIHCDIK  540 (702)
Q Consensus       471 i~~l~~~~--~~~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~-----ivH~dlk  540 (702)
                      |+++++++  +.++..++||||+++++|.+++...   ...+++.+++.++.|++.||+|||++   +     |+|+|||
T Consensus        67 i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~  143 (279)
T 2w5a_A           67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLK  143 (279)
T ss_dssp             BCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCS
T ss_pred             CCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccc
Confidence            77787765  5578999999999999999999753   23489999999999999999999999   8     9999999


Q ss_pred             CCcEEEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCC
Q 038002          541 LRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVST  620 (702)
Q Consensus       541 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~  620 (702)
                      |+||+++.++.+||+|||++........ ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||....  
T Consensus       144 p~NIl~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--  220 (279)
T 2w5a_A          144 PANVFLDGKQNVKLGDFGLARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--  220 (279)
T ss_dssp             GGGEEECSSSCEEECCCCHHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS--
T ss_pred             hhhEEEcCCCCEEEecCchheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC--
Confidence            9999999999999999999987543221 1233568999999999988889999999999999999999999996541  


Q ss_pred             cchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          621 ADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                        ....    ......+...     ..+...+..+.+++.+||+.||++||+++||++.+....
T Consensus       221 --~~~~----~~~i~~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          221 --QKEL----AGKIREGKFR-----RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             --HHHH----HHHHHHTCCC-----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             --HHHH----HHHHhhcccc-----cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence              1111    1111222111     122334567899999999999999999999998776544

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.97  E-value=3.6e-30  Score=275.37  Aligned_cols=229  Identities=15%  Similarity=0.146  Sum_probs=170.1

Q ss_pred             cccccccceEEEeEE--EEEeeeeh---hhhHhh--------------------------------eeeEEEEEecCCee
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF---LCFLIA--------------------------------ISSLLVYKHRSSKK  484 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~---~~~avk--------------------------------i~~l~~~~~~~~~~  484 (702)
                      .+.++..+.||+|++  ||++....   ..||+|                                ++.+..++...+..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence            456667788999987  88776532   356665                                55666888889999


Q ss_pred             EEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE-----------------
Q 038002          485 LLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI-----------------  546 (702)
Q Consensus       485 ~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll-----------------  546 (702)
                      ++||||+ +++|.+++.... ..+++.++..++.||+.||+|||++   +|+||||||+|||+                 
T Consensus        98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~  173 (355)
T 2eu9_A           98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEE  173 (355)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred             EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccccc
Confidence            9999999 567777666543 4689999999999999999999999   99999999999999                 


Q ss_pred             --eCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          547 --DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       547 --~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                        +.++.+||+|||++......    .....||+.|+|||++.+..++.++||||||+++|||++|+.||..........
T Consensus       174 ~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  249 (355)
T 2eu9_A          174 KSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV  249 (355)
T ss_dssp             EEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             cccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence              67889999999999875332    234568999999999998899999999999999999999999997542111000


Q ss_pred             hhHHHH-------HHhhhccc----------------------cccccc-cccCHHHHHHHHHHHHHcccCCCCCCCCHH
Q 038002          625 LLSTWV-------YNCFVAGE----------------------FNKLVE-EEVDKITLERMVKTGLLCIQDEPNLRPSMK  674 (702)
Q Consensus       625 ~~~~~~-------~~~~~~~~----------------------~~~~~~-~~~~~~~~~~l~~li~~cL~~dP~~RPt~~  674 (702)
                      ......       ........                      ...... ..........+.+++.+||+.||++|||++
T Consensus       250 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~  329 (355)
T 2eu9_A          250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLA  329 (355)
T ss_dssp             HHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHH
Confidence            000000       00000000                      000000 012334567899999999999999999999


Q ss_pred             HHHH
Q 038002          675 NVIL  678 (702)
Q Consensus       675 evl~  678 (702)
                      |+++
T Consensus       330 e~l~  333 (355)
T 2eu9_A          330 EALL  333 (355)
T ss_dssp             HHTT
T ss_pred             HHhc
Confidence            9985

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.97  E-value=1e-30  Score=293.22  Aligned_cols=219  Identities=23%  Similarity=0.234  Sum_probs=170.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEe
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      +.++..++||+|++  ||++....  ..+|+|                             |+++++++++++..++|||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            45666788999988  88777643  455655                             8889999999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC---CcEEEecccceeecCCC
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS---WRAKISDFGLAKLLMPN  566 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~  566 (702)
                      |+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++..   +.+||+|||++......
T Consensus       117 ~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~  192 (494)
T 3lij_A          117 CYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ  192 (494)
T ss_dssp             CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred             cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence            999999999887654 689999999999999999999999   99999999999999764   45999999999876543


Q ss_pred             CCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          567 QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       567 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                      .  ......||+.|+|||++. ..++.++|||||||++|+|++|..||.....   ...     ...+..+....  ...
T Consensus       193 ~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~-----~~~i~~~~~~~--~~~  259 (494)
T 3lij_A          193 K--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD---QEI-----LRKVEKGKYTF--DSP  259 (494)
T ss_dssp             B--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHH-----HHHHHHTCCCC--CSG
T ss_pred             c--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH---HHH-----HHHHHhCCCCC--Cch
Confidence            3  234467999999999876 4689999999999999999999999965411   111     11111111110  111


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .....+..+.+++.+||+.||++|||++|+++
T Consensus       260 ~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          260 EWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence            11234567889999999999999999999885

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.97  E-value=1.7e-30  Score=290.70  Aligned_cols=222  Identities=23%  Similarity=0.228  Sum_probs=173.3

Q ss_pred             CcccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEE
Q 038002          441 GNDKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       441 ~~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      +.+.++..+.||+|++  ||++....  ..||+|                             |++++.++.+.+..++|
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   99 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence            3455666788999988  88877643  556666                             88899999999999999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe---CCCcEEEecccceeecC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID---DSWRAKISDFGLAKLLM  564 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~a~~~~  564 (702)
                      |||+++++|.+.+.... .+++.++..++.||+.||+|||++   +|+||||||+|||++   .++.+||+|||++....
T Consensus       100 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  175 (486)
T 3mwu_A          100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (486)
T ss_dssp             ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred             EEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence            99999999999987654 799999999999999999999999   999999999999995   45679999999998654


Q ss_pred             CCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          565 PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       565 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      ...  ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||....   ....+     ..+..+.....  
T Consensus       176 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~~-----~~i~~~~~~~~--  242 (486)
T 3mwu_A          176 QNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN---EYDIL-----KRVETGKYAFD--  242 (486)
T ss_dssp             CC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHH-----HHHHHTCCCSC--
T ss_pred             CCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHH-----HHHHhCCCCCC--
Confidence            332  2344579999999998875 58999999999999999999999996431   11111     11111111111  


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .......++.+.+++.+||+.||++|||+.|+++.
T Consensus       243 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            11112345678899999999999999999999984

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.97  E-value=9.6e-31  Score=292.69  Aligned_cols=221  Identities=23%  Similarity=0.238  Sum_probs=176.2

Q ss_pred             CcccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEE
Q 038002          441 GNDKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       441 ~~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~l  486 (702)
                      +.+.++..+.||+|++  ||++....  ..||||                              |++++.++++.+..++
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            4566777889999987  88777653  566666                              7888999999999999


Q ss_pred             EEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE---eCCCcEEEecccceeec
Q 038002          487 VYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLL  563 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~~~  563 (702)
                      ||||+.+|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||+   +.++.+||+|||++..+
T Consensus       104 v~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  179 (484)
T 3nyv_A          104 VGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF  179 (484)
T ss_dssp             EECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred             EEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence            999999999999997655 799999999999999999999999   99999999999999   56789999999999876


Q ss_pred             CCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccc
Q 038002          564 MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV  643 (702)
Q Consensus       564 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  643 (702)
                      .....  .....||+.|+|||++.+ .++.++||||||+++|+|++|+.||....   ....     ...+..+..... 
T Consensus       180 ~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~-----~~~i~~~~~~~~-  247 (484)
T 3nyv_A          180 EASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN---EYDI-----LKKVEKGKYTFE-  247 (484)
T ss_dssp             CCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHH-----HHHHHHCCCCCC-
T ss_pred             ccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC---HHHH-----HHHHHcCCCCCC-
Confidence            44332  334569999999998865 68999999999999999999999996541   1111     111111111111 


Q ss_pred             ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          644 EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       644 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       .......++.+.+++.+||+.||++|||++|+++
T Consensus       248 -~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          248 -LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             -SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence             0111234567889999999999999999999986

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.97  E-value=6e-31  Score=273.47  Aligned_cols=221  Identities=21%  Similarity=0.248  Sum_probs=161.5

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEE
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      .+.++..+.||+|++  ||++....  ..||+|                             |+++++++.+++..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            345566788898887  77777632  566666                             788899999999999999


Q ss_pred             ecCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCC
Q 038002          489 EFMSKGSLADLLFN---LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP  565 (702)
Q Consensus       489 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~  565 (702)
                      ||+++ +|.+++..   ....+++.++..++.||+.||+|||++  .+|+||||||+||+++.++.+||+|||++.....
T Consensus        86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  162 (290)
T 3fme_A           86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD  162 (290)
T ss_dssp             ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred             ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence            99975 88887754   344799999999999999999999984  2899999999999999999999999999987643


Q ss_pred             CCCceeeceeccccccCcccc----cCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccc
Q 038002          566 NQTGIVAGVRGSRGYMAPEWQ----NSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNK  641 (702)
Q Consensus       566 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  641 (702)
                      ...  .....||+.|+|||.+    .+..++.++||||||+++|||++|+.||........  ...    . ........
T Consensus       163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~----~-~~~~~~~~  233 (290)
T 3fme_A          163 DVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ--QLK----Q-VVEEPSPQ  233 (290)
T ss_dssp             ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH--HHH----H-HHHSCCCC
T ss_pred             ccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH--HHH----H-HhccCCCC
Confidence            322  2334689999999985    566789999999999999999999999964321111  111    1 11111111


Q ss_pred             ccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          642 LVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       642 ~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .    .....+..+.+++.+||+.||++|||++|+++
T Consensus       234 ~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          234 L----PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             C----CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             c----ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            1    11234567899999999999999999999987

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.97  E-value=3.5e-31  Score=281.13  Aligned_cols=222  Identities=19%  Similarity=0.209  Sum_probs=154.5

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEE--------ecCCe
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYK--------HRSSK  483 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~--------~~~~~  483 (702)
                      .++..+.||+|++  ||++....  ..||+|                            |++++.++        .....
T Consensus        29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~  108 (337)
T 3ll6_A           29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE  108 (337)
T ss_dssp             EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred             eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence            4455677888877  77776532  556665                            77777776        45566


Q ss_pred             eEEEEecCCCCCHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCC--eEecCCCCCcEEEeCCCcEEEecccc
Q 038002          484 KLLVYEFMSKGSLADLLFN--LETRPLWRDRVRIALDVARGLLYLHDECEVQ--IIHCDIKLRNILIDDSWRAKISDFGL  559 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~  559 (702)
                      .++||||+. |+|.+++..  ....+++.+++.++.||+.||+|||++   +  |+||||||+|||++.++.+||+|||+
T Consensus       109 ~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  184 (337)
T 3ll6_A          109 FLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFGS  184 (337)
T ss_dssp             EEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred             EEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCcc
Confidence            899999996 699998865  334699999999999999999999999   8  99999999999999999999999999


Q ss_pred             eeecCCCCCce-----------eeceeccccccCcccc---cCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          560 AKLLMPNQTGI-----------VAGVRGSRGYMAPEWQ---NSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       560 a~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                      +..........           .....||+.|+|||.+   .+..++.++||||||+++|||++|+.||.......    
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----  260 (337)
T 3ll6_A          185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR----  260 (337)
T ss_dssp             CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred             ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH----
Confidence            98764432211           1134589999999988   56678999999999999999999999996431110    


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                              ........    .........+.+++.+||+.||++|||++|+++.|+.+..
T Consensus       261 --------~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~  308 (337)
T 3ll6_A          261 --------IVNGKYSI----PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA  308 (337)
T ss_dssp             -------------CCC----CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --------hhcCcccC----CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence                    00001100    0111123457889999999999999999999999988643

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.97  E-value=1.3e-30  Score=289.64  Aligned_cols=232  Identities=18%  Similarity=0.178  Sum_probs=159.0

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEE-----ecCCee
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYK-----HRSSKK  484 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~-----~~~~~~  484 (702)
                      +.++..+.||+|++  ||++....  ..||||                             |+++++++     +..+..
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            45667788999988  88886543  566766                             77888777     344689


Q ss_pred             EEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecC
Q 038002          485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLM  564 (702)
Q Consensus       485 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~  564 (702)
                      |+||||+ +++|.+++.... .+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++...
T Consensus       133 ~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  207 (458)
T 3rp9_A          133 YVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVD  207 (458)
T ss_dssp             EEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred             EEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence            9999998 569999997654 799999999999999999999999   99999999999999999999999999998764


Q ss_pred             CCCC--------------------------ceeeceeccccccCcccc-cCCCCCccccccchhHhHHHhhh--------
Q 038002          565 PNQT--------------------------GIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIIC--------  609 (702)
Q Consensus       565 ~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlGvil~ellt--------  609 (702)
                      ....                          .......||+.|+|||++ ....++.++|||||||++|||++        
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~  287 (458)
T 3rp9_A          208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY  287 (458)
T ss_dssp             SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSS
T ss_pred             CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccc
Confidence            2221                          123446789999999975 56679999999999999999999        


Q ss_pred             ---CCcCCcCCCCCc----------------chhhhHHHHHHhhhccc-----------cc---ccc-------ccccCH
Q 038002          610 ---CRSNFEVNVSTA----------------DEVLLSTWVYNCFVAGE-----------FN---KLV-------EEEVDK  649 (702)
Q Consensus       610 ---G~~Pf~~~~~~~----------------~~~~~~~~~~~~~~~~~-----------~~---~~~-------~~~~~~  649 (702)
                         |+.+|.......                ........+........           ..   ..+       .....+
T Consensus       288 ~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (458)
T 3rp9_A          288 HADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFP  367 (458)
T ss_dssp             GGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGST
T ss_pred             cccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCC
Confidence               555554321100                00000000000000000           00   000       001122


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          650 ITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .....+.+|+.+||+.||++|||++|+++.
T Consensus       368 ~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H  397 (458)
T 3rp9_A          368 ASSADAIHLLKRMLVFNPNKRITINECLAH  397 (458)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            336778999999999999999999999984

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.97  E-value=1.6e-30  Score=286.43  Aligned_cols=169  Identities=21%  Similarity=0.186  Sum_probs=137.5

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecC-----Ce
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRS-----SK  483 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~-----~~  483 (702)
                      .+.+...+.||+|++  ||++....  ..||||                             |++++.++...     +.
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            456667789999987  88887654  567776                             77788777665     67


Q ss_pred             eEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          484 KLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                      .|+||||+. ++|.+++.... .+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++..
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~  179 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTI  179 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence            999999986 59999997654 699999999999999999999999   9999999999999999999999999999976


Q ss_pred             CCCCC---------------------ceeeceeccccccCcccc-cCCCCCccccccchhHhHHHhhhCCcCCc
Q 038002          564 MPNQT---------------------GIVAGVRGSRGYMAPEWQ-NSGLITVKSDVYSFGVVLLEIICCRSNFE  615 (702)
Q Consensus       564 ~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlGvil~elltG~~Pf~  615 (702)
                      .....                     .......||+.|+|||++ ....++.++|||||||++|||++|..||.
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            43321                     123556789999999975 56679999999999999999998655543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.97  E-value=8.5e-31  Score=274.66  Aligned_cols=197  Identities=23%  Similarity=0.355  Sum_probs=157.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE---e
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI---D  547 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll---~  547 (702)
                      |+++++++.+++..++||||+++++|.+++.... .+++.++..++.|++.||+|||++   +|+|+||||+||++   +
T Consensus        68 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~  143 (304)
T 2jam_A           68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPE  143 (304)
T ss_dssp             BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSS
T ss_pred             eeehhhhcccCCEEEEEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCC
Confidence            7888899999999999999999999999997654 689999999999999999999999   99999999999999   7


Q ss_pred             CCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          548 DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      .++.+||+|||++......   ......|++.|+|||.+.+..++.++||||||+++|||++|+.||....   .. .. 
T Consensus       144 ~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---~~-~~-  215 (304)
T 2jam_A          144 ENSKIMITDFGLSKMEQNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET---ES-KL-  215 (304)
T ss_dssp             TTCCEEBCSCSTTCCCCCB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC---HH-HH-
T ss_pred             CCCCEEEccCCcceecCCC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC---HH-HH-
Confidence            8899999999998754322   1233568999999999999899999999999999999999999996431   11 11 


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhCCc
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL--MLEGTM  684 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~--~Le~~~  684 (702)
                         ...+..+...  .........+..+.+++.+||+.||++|||++|+++  .+++..
T Consensus       216 ---~~~i~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (304)
T 2jam_A          216 ---FEKIKEGYYE--FESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNT  269 (304)
T ss_dssp             ---HHHHHHCCCC--CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSC
T ss_pred             ---HHHHHcCCCC--CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCC
Confidence               1111111110  111122334567899999999999999999999997  445443

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.97  E-value=3.3e-31  Score=286.04  Aligned_cols=184  Identities=12%  Similarity=0.042  Sum_probs=139.0

Q ss_pred             CeeEEEEecCCCCCHHHHhhcCCCCCCHHHH------HHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEe
Q 038002          482 SKKLLVYEFMSKGSLADLLFNLETRPLWRDR------VRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKIS  555 (702)
Q Consensus       482 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~------~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~  555 (702)
                      ...|+||||++ |+|.+++......+.+..+      ..++.||+.||+|||++   +|+||||||+|||++.++.+||+
T Consensus       161 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~  236 (371)
T 3q60_A          161 ANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGHFTPDNLFIMPDGRLMLG  236 (371)
T ss_dssp             EEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGEEECTTSCEEEC
T ss_pred             eeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCcCCHHHEEECCCCCEEEE
Confidence            44899999998 8999999875434555555      67889999999999999   99999999999999999999999


Q ss_pred             cccceeecCCCCCceeeceeccccccCcccccC--CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHh
Q 038002          556 DFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS--GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNC  633 (702)
Q Consensus       556 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~  633 (702)
                      |||+++....    ......+++.|+|||++.+  ..++.++|||||||++|||++|+.||........... .......
T Consensus       237 DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~-~~~~~~~  311 (371)
T 3q60_A          237 DVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSW-KRPSLRV  311 (371)
T ss_dssp             CGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCC-CBCCTTS
T ss_pred             ecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccch-hhhhhhh
Confidence            9999987532    1224456799999999987  6899999999999999999999999976532211100 0000000


Q ss_pred             hhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          634 FVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       634 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .....    .........++.+.+++.+||+.||++|||++|+++
T Consensus       312 ~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          312 PGTDS----LAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             CCCCS----CCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             ccccc----cchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            00000    000111234678899999999999999999999875

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.96  E-value=3.3e-31  Score=281.42  Aligned_cols=203  Identities=22%  Similarity=0.310  Sum_probs=150.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++.+++..++||||+++++|.+++.... .+++..+..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        86 iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~  161 (331)
T 4aaa_A           86 LVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSG  161 (331)
T ss_dssp             BCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTS
T ss_pred             EeeEEEEeecCCEEEEEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCC
Confidence            8889999999999999999999999998876554 799999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW  629 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~  629 (702)
                      .+||+|||++........ ......|++.|+|||.+.+. .++.++||||||+++|||++|+.||...............
T Consensus       162 ~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  240 (331)
T 4aaa_A          162 VVKLCDFGFARTLAAPGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMC  240 (331)
T ss_dssp             CEEECCCTTC-------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             cEEEEeCCCceeecCCcc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence            999999999986543222 23345689999999988765 7899999999999999999999999754211110000000


Q ss_pred             H-------HHhhh-----c-ccccccccc----ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          630 V-------YNCFV-----A-GEFNKLVEE----EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       630 ~-------~~~~~-----~-~~~~~~~~~----~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .       ...+.     . .........    ...+..++.+.+++.+||+.||++|||++|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          241 LGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             hCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            0       00000     0 000000000    112234678999999999999999999999886

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.96  E-value=1.1e-30  Score=269.58  Aligned_cols=216  Identities=22%  Similarity=0.309  Sum_probs=162.3

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEe
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      .+...+.||+|++  ||.+....  ..||+|                              |++++.++.+++..++|||
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   91 (276)
T 2h6d_A           12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVME   91 (276)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEe
Confidence            4455567777776  77766542  445554                              7888899999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      |+++++|.+++.... .+++.++..++.||+.||+|||++   +|+|+||||+||+++.++.+||+|||++.......  
T Consensus        92 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--  165 (276)
T 2h6d_A           92 YVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--  165 (276)
T ss_dssp             CCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred             ccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc--
Confidence            999999999997654 689999999999999999999999   99999999999999999999999999998764332  


Q ss_pred             eeeceeccccccCcccccCCCC-CccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          570 IVAGVRGSRGYMAPEWQNSGLI-TVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                      ......+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||....   ...     .......+..      ..+
T Consensus       166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~---~~~-----~~~~~~~~~~------~~~  231 (276)
T 2h6d_A          166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH---VPT-----LFKKIRGGVF------YIP  231 (276)
T ss_dssp             -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS---HHH-----HHHHHHHCCC------CCC
T ss_pred             ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc---HHH-----HHHHhhcCcc------cCc
Confidence            2234568999999999887765 689999999999999999999996431   111     1111111111      112


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ......+.+++.+||+.||++|||++|+++.
T Consensus       232 ~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          232 EYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            2234678899999999999999999999984

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.96  E-value=2.8e-31  Score=287.29  Aligned_cols=168  Identities=17%  Similarity=0.191  Sum_probs=133.1

Q ss_pred             eEEEEecCCCCCHHHHhhcCCCC------CCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecc
Q 038002          484 KLLVYEFMSKGSLADLLFNLETR------PLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDF  557 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~~~------~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df  557 (702)
                      .|+||||+ +|+|.+++......      +++..++.++.||+.||+|||++   +|+||||||+|||++.++.+||+||
T Consensus       175 ~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DF  250 (377)
T 3byv_A          175 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLRPVDIVLDQRGGVFLTGF  250 (377)
T ss_dssp             EEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCG
T ss_pred             EEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEec
Confidence            89999999 67999999764311      22578888999999999999999   9999999999999999999999999


Q ss_pred             cceeecCCCCCceeeceeccccccCcccccCC-----------CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          558 GLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-----------LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       558 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                      |+++....    ......| +.|+|||++.+.           .++.++|||||||++|||++|+.||..........  
T Consensus       251 G~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~--  323 (377)
T 3byv_A          251 EHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSE--  323 (377)
T ss_dssp             GGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSG--
T ss_pred             hhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchh--
Confidence            99986322    3345567 999999998877           89999999999999999999999996542111100  


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                                    ....  .....++.+.+++.+||+.||++|||++|+++
T Consensus       324 --------------~~~~--~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          324 --------------WIFR--SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             --------------GGGS--SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             --------------hhhh--hccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence                          0000  01123467889999999999999999999986

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.96  E-value=2.3e-30  Score=270.32  Aligned_cols=192  Identities=22%  Similarity=0.297  Sum_probs=154.1

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++..++..++||||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+|+||||+||+++.++
T Consensus        86 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~  161 (298)
T 1phk_A           86 IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDM  161 (298)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTC
T ss_pred             EeeeeeeeccCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCC
Confidence            7778889999999999999999999999997654 689999999999999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCccccc------CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN------SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      .+||+|||++........  .....+++.|+|||.+.      ...++.++||||||+++|||++|+.||....   ...
T Consensus       162 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~---~~~  236 (298)
T 1phk_A          162 NIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK---QML  236 (298)
T ss_dssp             CEEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHH
T ss_pred             cEEEecccchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc---HHH
Confidence            999999999987644322  33456899999999874      4568899999999999999999999996431   111


Q ss_pred             hhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .     ......+....  ........+..+.+++.+||+.||++|||++|+++
T Consensus       237 ~-----~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          237 M-----LRMIMSGNYQF--GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             H-----HHHHHHTCCCC--CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             H-----HHHHhcCCccc--CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            1     11111111110  01111234567899999999999999999999986

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.96  E-value=7.5e-31  Score=278.13  Aligned_cols=199  Identities=25%  Similarity=0.332  Sum_probs=157.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCC------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLE------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |+++++++.+++..++||||+++++|.+++....      ..+++.+++.++.||+.||+|||++   +|+||||||+||
T Consensus        95 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NI  171 (327)
T 2yfx_A           95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNC  171 (327)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred             CCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHE
Confidence            8889999999999999999999999999998654      3488999999999999999999999   999999999999


Q ss_pred             EEeC---CCcEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCC
Q 038002          545 LIDD---SWRAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVS  619 (702)
Q Consensus       545 ll~~---~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~  619 (702)
                      +++.   +..+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |..||.... 
T Consensus       172 li~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-  250 (327)
T 2yfx_A          172 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-  250 (327)
T ss_dssp             EESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-
T ss_pred             EEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC-
Confidence            9984   44699999999976533222 12234557889999999988899999999999999999998 999996431 


Q ss_pred             CcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          620 TADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                         ....    ......+..     ...+......+.+++.+||+.||++||++++|++.|+.+..
T Consensus       251 ---~~~~----~~~~~~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          251 ---NQEV----LEFVTSGGR-----MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             ---HHHH----HHHHHTTCC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---HHHH----HHHHhcCCC-----CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence               1111    111111111     11122345678899999999999999999999999987543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=3.5e-30  Score=279.25  Aligned_cols=228  Identities=22%  Similarity=0.209  Sum_probs=168.0

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------eeeEEEEE----------------
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------ISSLLVYK----------------  478 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------i~~l~~~~----------------  478 (702)
                      ...++..+.||+|++  ||++....  ..||+|                       |+++++++                
T Consensus         6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~   85 (383)
T 3eb0_A            6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDD   85 (383)
T ss_dssp             CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC-------------
T ss_pred             cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCcccccccccccc
Confidence            345677788999988  88887643  677777                       77787776                


Q ss_pred             ----------------------ecCCeeEEEEecCCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCC
Q 038002          479 ----------------------HRSSKKLLVYEFMSKGSLADLLFN---LETRPLWRDRVRIALDVARGLLYLHDECEVQ  533 (702)
Q Consensus       479 ----------------------~~~~~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~  533 (702)
                                            ..+...++||||+++ +|.+.+..   ....+++..+..++.||++||+|||++   +
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---g  161 (383)
T 3eb0_A           86 HNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL---G  161 (383)
T ss_dssp             ------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---T
T ss_pred             cccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---c
Confidence                                  334558999999984 88777753   344799999999999999999999999   9


Q ss_pred             eEecCCCCCcEEEe-CCCcEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCC
Q 038002          534 IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCR  611 (702)
Q Consensus       534 ivH~dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~  611 (702)
                      |+||||||+||+++ .++.+||+|||+++.......  .....+|+.|+|||.+.+. .++.++||||||+++|||++|+
T Consensus       162 i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  239 (383)
T 3eb0_A          162 ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGK  239 (383)
T ss_dssp             EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCC
Confidence            99999999999998 688999999999987644332  3345689999999988764 5899999999999999999999


Q ss_pred             cCCcCCCCCcchhhhHHHHHHh--------------hhccccccccc----cccCHHHHHHHHHHHHHcccCCCCCCCCH
Q 038002          612 SNFEVNVSTADEVLLSTWVYNC--------------FVAGEFNKLVE----EEVDKITLERMVKTGLLCIQDEPNLRPSM  673 (702)
Q Consensus       612 ~Pf~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~----~~~~~~~~~~l~~li~~cL~~dP~~RPt~  673 (702)
                      .||.......   .+.......              .....+.....    ...+...+..+.+++.+||+.||++|||+
T Consensus       240 ~pf~~~~~~~---~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  316 (383)
T 3eb0_A          240 PLFSGETSID---QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINP  316 (383)
T ss_dssp             CSSCCSSHHH---HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             CCCCCCChHH---HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence            9997542111   111111000              00000000000    01233345678999999999999999999


Q ss_pred             HHHHH
Q 038002          674 KNVIL  678 (702)
Q Consensus       674 ~evl~  678 (702)
                      +|+++
T Consensus       317 ~e~l~  321 (383)
T 3eb0_A          317 YEAMA  321 (383)
T ss_dssp             HHHHT
T ss_pred             HHHhc
Confidence            99985

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=3e-30  Score=278.14  Aligned_cols=232  Identities=20%  Similarity=0.175  Sum_probs=167.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecC------Ce
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRS------SK  483 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~------~~  483 (702)
                      ..++..+.||+|++  ||++....  ..||+|                             |++++.++..+      ..
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~  104 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD  104 (367)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred             ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence            44566778899988  88887543  566666                             67777777665      35


Q ss_pred             eEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          484 KLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                      .|+||||+ +++|.+++...  .+++..+..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||+++..
T Consensus       105 ~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  178 (367)
T 1cm8_A          105 FYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA  178 (367)
T ss_dssp             CEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence            69999999 88999999763  689999999999999999999999   9999999999999999999999999999875


Q ss_pred             CCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH-------HHhhh
Q 038002          564 MPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV-------YNCFV  635 (702)
Q Consensus       564 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~-------~~~~~  635 (702)
                      ...    .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+....       ...+.
T Consensus       179 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~  254 (367)
T 1cm8_A          179 DSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ  254 (367)
T ss_dssp             CSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred             ccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence            432    234568999999998876 689999999999999999999999997542111000000000       00000


Q ss_pred             ccc-------ccccc---ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhCCc
Q 038002          636 AGE-------FNKLV---EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM--LEGTM  684 (702)
Q Consensus       636 ~~~-------~~~~~---~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~--Le~~~  684 (702)
                      ...       +....   -..........+.+++.+||+.||++|||++|+++.  ++...
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             hHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence            000       00000   001223346778999999999999999999999983  55543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.96  E-value=1.1e-30  Score=301.55  Aligned_cols=225  Identities=20%  Similarity=0.230  Sum_probs=172.9

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-----hhhHhh----------------------------eeeEEEEEecCCeeEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-----LCFLIA----------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-----~~~avk----------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      +.+...+.||+|++  ||++....     ..+|+|                            |+++++++. ++..++|
T Consensus       390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv  468 (656)
T 2j0j_A          390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII  468 (656)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence            34455678899888  88876532     234444                            788888774 5678999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |||+++|+|.+++......+++..++.++.||+.||+|||++   +|+||||||+|||++.++.+||+|||++.......
T Consensus       469 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~  545 (656)
T 2j0j_A          469 MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  545 (656)
T ss_dssp             EECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred             EEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence            999999999999987766789999999999999999999999   99999999999999999999999999998765443


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                      ........+++.|+|||.+.+..++.++||||||+++|||++ |..||.....   . ..    ...+..+..     ..
T Consensus       546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~---~-~~----~~~i~~~~~-----~~  612 (656)
T 2j0j_A          546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN---N-DV----IGRIENGER-----LP  612 (656)
T ss_dssp             --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---H-HH----HHHHHHTCC-----CC
T ss_pred             ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH---H-HH----HHHHHcCCC-----CC
Confidence            333334557789999999988899999999999999999997 9999964311   1 11    111111111     11


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .+...+..+.+++.+||+.||++|||+++|+++|+.+.
T Consensus       613 ~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          613 MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            22334568889999999999999999999999998753

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.96  E-value=6.9e-30  Score=275.51  Aligned_cols=236  Identities=21%  Similarity=0.225  Sum_probs=170.0

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------------------eeeEEEEEecC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------------------ISSLLVYKHRS  481 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------------------i~~l~~~~~~~  481 (702)
                      ..+...+.||+|++  ||++....  ..||+|                                     |++++.++...
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~   98 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   98 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence            45566778888887  88776532  455655                                     44556666543


Q ss_pred             C----eeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC------CC
Q 038002          482 S----KKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD------SW  550 (702)
Q Consensus       482 ~----~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~------~~  550 (702)
                      +    ..++|||++ +++|.+++.... ..+++.++..++.||+.||+|||+++  +|+||||||+|||++.      .+
T Consensus        99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~~  175 (373)
T 1q8y_A           99 GPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLI  175 (373)
T ss_dssp             ETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEE
T ss_pred             CCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCcc
Confidence            3    899999999 899999998753 35899999999999999999999942  8999999999999953      34


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCc---chhhhH
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTA---DEVLLS  627 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~---~~~~~~  627 (702)
                      .+||+|||++......    .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......   ....+.
T Consensus       176 ~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  251 (373)
T 1q8y_A          176 QIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA  251 (373)
T ss_dssp             EEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred             eEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHH
Confidence            7999999999876432    234468999999999998899999999999999999999999997542211   011111


Q ss_pred             HHHHHhhhc--------c-----------cc-----------ccccc--cccCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 038002          628 TWVYNCFVA--------G-----------EF-----------NKLVE--EEVDKITLERMVKTGLLCIQDEPNLRPSMKN  675 (702)
Q Consensus       628 ~~~~~~~~~--------~-----------~~-----------~~~~~--~~~~~~~~~~l~~li~~cL~~dP~~RPt~~e  675 (702)
                      . .......        .           ..           .....  ...+......+.+++.+||+.||++|||++|
T Consensus       252 ~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  330 (373)
T 1q8y_A          252 Q-IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG  330 (373)
T ss_dssp             H-HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred             H-HHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence            1 0000000        0           00           00000  0245677889999999999999999999999


Q ss_pred             HHH--HHhCCcCC
Q 038002          676 VIL--MLEGTMEI  686 (702)
Q Consensus       676 vl~--~Le~~~~~  686 (702)
                      +++  .+.+....
T Consensus       331 ll~hp~f~~~~~~  343 (373)
T 1q8y_A          331 LVNHPWLKDTLGM  343 (373)
T ss_dssp             HHTCGGGTTCTTC
T ss_pred             HhhChhhhcccCc
Confidence            998  44554433

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.96  E-value=7.1e-30  Score=287.02  Aligned_cols=191  Identities=25%  Similarity=0.306  Sum_probs=153.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++++++..++||||+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus       108 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~  183 (504)
T 3q5i_A          108 IIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKN  183 (504)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTT
T ss_pred             CCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCC
Confidence            7788899999999999999999999999997654 799999999999999999999999   999999999999998776


Q ss_pred             ---cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          551 ---RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       551 ---~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                         .+||+|||++.......  ......||+.|+|||++. ..++.++||||||+++|+|++|..||.....   ..   
T Consensus       184 ~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~---  254 (504)
T 3q5i_A          184 SLLNIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND---QD---  254 (504)
T ss_dssp             CCSSEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HH---
T ss_pred             CCccEEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH---HH---
Confidence               69999999998765433  234457999999999887 4689999999999999999999999975411   11   


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                        ....+..+....  ........+..+.+++.+||+.||.+|||++|+++
T Consensus       255 --~~~~i~~~~~~~--~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          255 --IIKKVEKGKYYF--DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             --HHHHHHHCCCCC--CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             --HHHHHHcCCCCC--CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence              111111111110  00011123567899999999999999999999986

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.96  E-value=1.8e-30  Score=274.86  Aligned_cols=220  Identities=21%  Similarity=0.210  Sum_probs=163.4

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEec------CCeeE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHR------SSKKL  485 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~------~~~~~  485 (702)
                      ..++..+.||+|++  ||++....  ..||+|                           |+++++++..      .+..+
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~  103 (326)
T 2x7f_A           24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW  103 (326)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEE
T ss_pred             CcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEE
Confidence            45566778888877  88877632  556666                           6777777765      57899


Q ss_pred             EEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecC
Q 038002          486 LVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLM  564 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~  564 (702)
                      +||||+++++|.+++.... ..+++..+..++.||+.||+|||++   +|+|+||||+||+++.++.+||+|||++....
T Consensus       104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  180 (326)
T 2x7f_A          104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  180 (326)
T ss_dssp             EEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred             EEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence            9999999999999998653 3688999999999999999999999   99999999999999999999999999988654


Q ss_pred             CCCCceeeceeccccccCccccc-----CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccc
Q 038002          565 PNQTGIVAGVRGSRGYMAPEWQN-----SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEF  639 (702)
Q Consensus       565 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  639 (702)
                      .... ......|++.|+|||.+.     +..++.++||||||+++|+|++|+.||....    ....   .. .......
T Consensus       181 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~---~~-~~~~~~~  251 (326)
T 2x7f_A          181 RTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH----PMRA---LF-LIPRNPA  251 (326)
T ss_dssp             -----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC----HHHH---HH-HHHHSCC
T ss_pred             cCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc----HHHH---HH-HhhcCcc
Confidence            3221 223456899999999886     5678899999999999999999999996431    1110   00 1111111


Q ss_pred             ccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          640 NKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       640 ~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ....    ....+..+.+++.+||+.||++||+++++++
T Consensus       252 ~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          252 PRLK----SKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             CCCS----CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccCC----ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            1111    1223567889999999999999999999987

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.96  E-value=2.6e-30  Score=273.35  Aligned_cols=192  Identities=23%  Similarity=0.311  Sum_probs=148.6

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++..++ .++||||+++++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++.++
T Consensus        77 i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~  151 (322)
T 2ycf_A           77 IIKIKNFFDAED-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQE  151 (322)
T ss_dssp             BCCEEEEEESSS-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSS
T ss_pred             CceEeeEEcCCc-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCC
Confidence            667777776655 899999999999999997654 789999999999999999999999   999999999999998766


Q ss_pred             c---EEEecccceeecCCCCCceeeceeccccccCccccc---CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          551 R---AKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQN---SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       551 ~---~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      .   +||+|||++.......  ......||+.|+|||++.   ...++.++||||||+++|+|++|+.||........  
T Consensus       152 ~~~~~kl~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--  227 (322)
T 2ycf_A          152 EDCLIKITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--  227 (322)
T ss_dssp             SSCCEEECCCTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--
T ss_pred             CCCeEEEccCccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--
Confidence            4   9999999998764322  223456899999999863   56788999999999999999999999975422211  


Q ss_pred             hhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       +....    ..+...  ..+......+..+.+++.+||+.||++||+++|+++
T Consensus       228 -~~~~~----~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          228 -LKDQI----TSGKYN--FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             -HHHHH----HHTCCC--CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             -HHHHH----HhCccc--cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence             11111    111110  001111223567889999999999999999999874

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.96  E-value=7.1e-30  Score=275.64  Aligned_cols=225  Identities=20%  Similarity=0.198  Sum_probs=159.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCC------e
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSS------K  483 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~------~  483 (702)
                      ..++..+.||+|++  ||++....  ..||+|                             |+++++++...+      .
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~  104 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  104 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence            34556678888877  77775432  455655                             777888776654      7


Q ss_pred             eEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          484 KLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                      .++||||+++ +|.+++..   .+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||++...
T Consensus       105 ~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~  177 (371)
T 2xrw_A          105 VYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  177 (371)
T ss_dssp             EEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred             eEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence            8999999975 78888853   588999999999999999999999   9999999999999999999999999999865


Q ss_pred             CCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHH-----------
Q 038002          564 MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYN-----------  632 (702)
Q Consensus       564 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~-----------  632 (702)
                      ....  ......||+.|+|||++.+..++.++||||||+++|||++|+.||.......   ........           
T Consensus       178 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~  252 (371)
T 2xrw_A          178 GTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID---QWNKVIEQLGTPCPEFMKK  252 (371)
T ss_dssp             --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHC-CCCCCHHHHTT
T ss_pred             cccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHHHHH
Confidence            4322  2334678999999999998899999999999999999999999997542110   00000000           


Q ss_pred             ------hhh--cc-----ccccccc-------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          633 ------CFV--AG-----EFNKLVE-------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       633 ------~~~--~~-----~~~~~~~-------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                            ...  ..     .+.....       ..........+.+++.+||+.||++|||++|+++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence                  000  00     0000000       01122346789999999999999999999999973

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.96  E-value=1.3e-30  Score=272.70  Aligned_cols=221  Identities=18%  Similarity=0.176  Sum_probs=166.2

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      +.++..+.||+|++  ||++....  ..+|+|                           |+++++++..++..++||||+
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   98 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC   98 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence            44555667777766  77666542  445544                           788889999999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCcee
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIV  571 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~  571 (702)
                      ++++|.+++......+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++....... ...
T Consensus        99 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~  174 (302)
T 2j7t_A           99 PGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-QKR  174 (302)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-HC-
T ss_pred             CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc-ccc
Confidence            99999999987666799999999999999999999999   99999999999999999999999999875431111 112


Q ss_pred             eceeccccccCcccc-----cCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          572 AGVRGSRGYMAPEWQ-----NSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       572 ~~~~gt~~y~aPE~~-----~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                      ....|++.|+|||.+     ....++.++||||||+++|+|++|..||.....   ....     ...........   .
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~-----~~~~~~~~~~~---~  243 (302)
T 2j7t_A          175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP---MRVL-----LKIAKSDPPTL---L  243 (302)
T ss_dssp             ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHH-----HHHHHSCCCCC---S
T ss_pred             ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH---HHHH-----HHHhccCCccc---C
Confidence            335689999999987     466789999999999999999999999964311   1111     11111111111   1


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .+...+..+.+++.+||+.||++|||++++++
T Consensus       244 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          244 TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            12233567889999999999999999999986

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.96  E-value=1.4e-29  Score=265.23  Aligned_cols=223  Identities=22%  Similarity=0.179  Sum_probs=166.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------------eeeEEEEE--ecCCeeE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------------ISSLLVYK--HRSSKKL  485 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------------i~~l~~~~--~~~~~~~  485 (702)
                      ..++..+.||+|++  ||++....  ..+|+|                               |+++++++  .+.+..+
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            34566678888877  77765532  334443                               77888776  5567899


Q ss_pred             EEEecCCCCCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecC
Q 038002          486 LVYEFMSKGSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLM  564 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~  564 (702)
                      +||||++++ |.+++... ...+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++....
T Consensus        85 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~  160 (305)
T 2wtk_C           85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALH  160 (305)
T ss_dssp             EEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence            999999886 77777653 34689999999999999999999999   99999999999999999999999999998764


Q ss_pred             CCC-CceeeceeccccccCcccccCCC--CCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccc
Q 038002          565 PNQ-TGIVAGVRGSRGYMAPEWQNSGL--ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNK  641 (702)
Q Consensus       565 ~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  641 (702)
                      ... ........|++.|+|||.+.+..  ++.++||||||+++|||++|+.||....    ...    .......+..  
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~----~~~~i~~~~~--  230 (305)
T 2wtk_C          161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN----IYK----LFENIGKGSY--  230 (305)
T ss_dssp             TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS----HHH----HHHHHHHCCC--
T ss_pred             ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch----HHH----HHHHHhcCCC--
Confidence            322 22334566899999999887643  4789999999999999999999997431    111    1111111111  


Q ss_pred             ccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhCC
Q 038002          642 LVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM--LEGT  683 (702)
Q Consensus       642 ~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~--Le~~  683 (702)
                          ..+......+.+++.+||+.||++|||++|+++.  +.+.
T Consensus       231 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  270 (305)
T 2wtk_C          231 ----AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKK  270 (305)
T ss_dssp             ----CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSC
T ss_pred             ----CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccC
Confidence                1122345678899999999999999999999974  4443

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.96  E-value=1.9e-30  Score=282.47  Aligned_cols=233  Identities=19%  Similarity=0.154  Sum_probs=167.5

Q ss_pred             cccccccceEEEeEE--EEEeeeeh-hhhHhh-----------------------eeeEEEEEecC------CeeEEEEe
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF-LCFLIA-----------------------ISSLLVYKHRS------SKKLLVYE  489 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~-~~~avk-----------------------i~~l~~~~~~~------~~~~lV~e  489 (702)
                      ...+...+.||+|++  ||++.... ..+|+|                       |++++.++...      ...++|||
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e  118 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLE  118 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEee
Confidence            345667789999988  88887644 346655                       77888777433      34889999


Q ss_pred             cCCCCCHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe-CCCcEEEecccceeecCCC
Q 038002          490 FMSKGSLADLLF--NLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       490 ~~~~gsL~~~l~--~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~  566 (702)
                      |++++.+.....  .....+++..+..++.||++||+|||++   +|+||||||+|||++ .++.+||+|||+++.....
T Consensus       119 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~  195 (394)
T 4e7w_A          119 YVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG  195 (394)
T ss_dssp             CCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             ccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence            998754443332  2344689999999999999999999999   999999999999999 7999999999999876443


Q ss_pred             CCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH-----------HHhh
Q 038002          567 QTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV-----------YNCF  634 (702)
Q Consensus       567 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~-----------~~~~  634 (702)
                      ..  .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||...........+....           ....
T Consensus       196 ~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~  273 (394)
T 4e7w_A          196 EP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNY  273 (394)
T ss_dssp             CC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGG
T ss_pred             CC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence            32  2345689999999988654 68999999999999999999999997542111100000000           0000


Q ss_pred             hccccccccc----cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          635 VAGEFNKLVE----EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       635 ~~~~~~~~~~----~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ....+.....    .......+..+.+++.+||+.||++|||+.|+++.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             SSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             hhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence            0011110000    01222345689999999999999999999999974

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.96  E-value=6e-30  Score=280.80  Aligned_cols=226  Identities=19%  Similarity=0.142  Sum_probs=165.1

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------eeeEEEEEec------CCeeEEEEec
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------ISSLLVYKHR------SSKKLLVYEF  490 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------i~~l~~~~~~------~~~~~lV~e~  490 (702)
                      .+...+.||+|++  ||++....  ..||||                       |++++.++..      ....++||||
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~  134 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY  134 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence            4556678999987  88887753  667777                       6777766532      2346799999


Q ss_pred             CCCCCHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC-CcEEEecccceeecCCC
Q 038002          491 MSKGSLADLLFN---LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS-WRAKISDFGLAKLLMPN  566 (702)
Q Consensus       491 ~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Dfg~a~~~~~~  566 (702)
                      +++ +|.+.+..   ....+++..+..++.||++||+|||++   +|+||||||+|||++.+ +.+||+|||+++.....
T Consensus       135 ~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~  210 (420)
T 1j1b_A          135 VPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG  210 (420)
T ss_dssp             CCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             ccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhcccC
Confidence            986 66666542   344789999999999999999999999   99999999999999965 56899999999876443


Q ss_pred             CCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHH-------hh--hc
Q 038002          567 QTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYN-------CF--VA  636 (702)
Q Consensus       567 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~-------~~--~~  636 (702)
                      ..  .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......   ..+......       .+  ..
T Consensus       211 ~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~---~~l~~i~~~lg~p~~~~~~~~~  285 (420)
T 1j1b_A          211 EP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV---DQLVEIIKVLGTPTREQIREMN  285 (420)
T ss_dssp             CC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCSCCHHHHHHHC
T ss_pred             CC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCHHHHHhhC
Confidence            32  2345689999999988664 7899999999999999999999999754211   111111110       00  00


Q ss_pred             ccccccccc---------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          637 GEFNKLVEE---------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       637 ~~~~~~~~~---------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ........+         .........+.+|+.+||+.||++|||++|+++
T Consensus       286 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence            000000000         112234578999999999999999999999986

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.96  E-value=3.3e-30  Score=269.16  Aligned_cols=221  Identities=23%  Similarity=0.317  Sum_probs=159.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------eeeEEEEEec------------
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------ISSLLVYKHR------------  480 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------i~~l~~~~~~------------  480 (702)
                      +.++..+.||+|++  ||++....  ..||+|                          |+++++++.+            
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   85 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK   85 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence            34455567777766  77766432  455555                          6666665533            


Q ss_pred             -CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccc
Q 038002          481 -SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGL  559 (702)
Q Consensus       481 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~  559 (702)
                       .+..++||||+++++|.+++......+++.+++.++.||+.||+|||++   +|+|+||||+||+++.++.+||+|||+
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~  162 (303)
T 1zy4_A           86 KKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGL  162 (303)
T ss_dssp             CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             cCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeCcc
Confidence             5788999999999999999987665688899999999999999999999   999999999999999999999999999


Q ss_pred             eeecCCCC-------------CceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhh
Q 038002          560 AKLLMPNQ-------------TGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVL  625 (702)
Q Consensus       560 a~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~  625 (702)
                      +.......             ........|++.|+|||.+.+. .++.++||||||+++|||++   ||...   .....
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~---~~~~~  236 (303)
T 1zy4_A          163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG---MERVN  236 (303)
T ss_dssp             CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH---HHHHH
T ss_pred             hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc---hhHHH
Confidence            98654321             1122345689999999988754 78999999999999999998   55321   11111


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                          .........  ....+.........+.+++.+||+.||++|||++++++
T Consensus       237 ----~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          237 ----ILKKLRSVS--IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             ----HHHHHHSTT--CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----HHHhccccc--cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence                111111111  11122334445667889999999999999999999987

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.96  E-value=1.3e-29  Score=279.33  Aligned_cols=222  Identities=24%  Similarity=0.287  Sum_probs=159.3

Q ss_pred             cccccceEEEeEE--EEE-eeeehhhhHhh-------------------------eeeEEEEEecCCeeEEEEecCCCCC
Q 038002          444 KVNDKRKLLTVLA--GCL-GSITFLCFLIA-------------------------ISSLLVYKHRSSKKLLVYEFMSKGS  495 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~-~~~~~~~~avk-------------------------i~~l~~~~~~~~~~~lV~e~~~~gs  495 (702)
                      .+...+.||+|++  |+. +......||||                         |++++..+.+++..++||||+. |+
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gs   94 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LN   94 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EE
T ss_pred             eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CC
Confidence            3444567888887  543 33333566666                         8889999999999999999996 69


Q ss_pred             HHHHhhcCCCC------CCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC-------------CcEEEec
Q 038002          496 LADLLFNLETR------PLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS-------------WRAKISD  556 (702)
Q Consensus       496 L~~~l~~~~~~------~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~-------------~~~kl~D  556 (702)
                      |.+++......      ..+..++.++.||+.||+|||++   +|+||||||+|||++.+             +.+||+|
T Consensus        95 L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D  171 (434)
T 2rio_A           95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD  171 (434)
T ss_dssp             HHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred             HHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence            99999865421      12334578999999999999999   99999999999999754             4899999


Q ss_pred             ccceeecCCCCCc---eeeceeccccccCcccccC-------CCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhh
Q 038002          557 FGLAKLLMPNQTG---IVAGVRGSRGYMAPEWQNS-------GLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVL  625 (702)
Q Consensus       557 fg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~  625 (702)
                      ||++.........   ......||+.|+|||++.+       ..++.++|||||||++|||++ |+.||......  .  
T Consensus       172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~--  247 (434)
T 2rio_A          172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR--E--  247 (434)
T ss_dssp             CTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH--H--
T ss_pred             cccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh--H--
Confidence            9999987543321   1234679999999998865       678999999999999999999 99999643211  1  


Q ss_pred             hHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          626 LSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       .........   .. ..........+..+.+++.+||+.||++|||+.||++
T Consensus       248 -~~i~~~~~~---~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          248 -SNIIRGIFS---LD-EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             -HHHHHTCCC---CC-CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -HHHhcCCCC---cc-cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence             111111000   00 1111224567789999999999999999999999985

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.96  E-value=9e-30  Score=274.09  Aligned_cols=230  Identities=19%  Similarity=0.218  Sum_probs=169.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecC-----CeeE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRS-----SKKL  485 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~-----~~~~  485 (702)
                      ..+...+.||+|++  ||++....  ..||+|                            |++++.++...     ...+
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  106 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY  106 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence            45667788999987  88886543  556666                            66777776544     4789


Q ss_pred             EEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCC
Q 038002          486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP  565 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~  565 (702)
                      +||||+. ++|.+++...  .+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++.....
T Consensus       107 iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  180 (364)
T 3qyz_A          107 IVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP  180 (364)
T ss_dssp             EEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             EEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence            9999997 5999999764  589999999999999999999999   999999999999999999999999999987643


Q ss_pred             CCCc--eeeceeccccccCccccc-CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccc--
Q 038002          566 NQTG--IVAGVRGSRGYMAPEWQN-SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFN--  640 (702)
Q Consensus       566 ~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~--  640 (702)
                      ....  ......||+.|+|||++. ...++.++||||||+++|||++|+.||...........+.... .......+.  
T Consensus       181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~  259 (364)
T 3qyz_A          181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL-GSPSQEDLNCI  259 (364)
T ss_dssp             GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHH-CSCCHHHHHTC
T ss_pred             CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHh-CCCCHHHHHHh
Confidence            3221  123457999999999765 4568999999999999999999999997542211111110000 000000000  


Q ss_pred             ----------cccc------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          641 ----------KLVE------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       641 ----------~~~~------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                                ....      ..........+.+++.+||+.||++|||++|+++.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                      0000      01122345678999999999999999999999973

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.96  E-value=5.8e-30  Score=274.83  Aligned_cols=227  Identities=21%  Similarity=0.167  Sum_probs=157.6

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------eeeEEEEEecCC-------eeEE
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------ISSLLVYKHRSS-------KKLL  486 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------i~~l~~~~~~~~-------~~~l  486 (702)
                      .++..+.||+|++  ||++....  ..||||                          |+++++++...+       ..++
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~l  103 (360)
T 3e3p_A           24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNV  103 (360)
T ss_dssp             TEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEE
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEE
Confidence            3455678888887  88777643  566666                          777877775433       2899


Q ss_pred             EEecCCCCCHHHHhh---cCCCCCCHHHHHHHHHHHHHHHHhhh--hcCCCCeEecCCCCCcEEEeC-CCcEEEecccce
Q 038002          487 VYEFMSKGSLADLLF---NLETRPLWRDRVRIALDVARGLLYLH--DECEVQIIHCDIKLRNILIDD-SWRAKISDFGLA  560 (702)
Q Consensus       487 V~e~~~~gsL~~~l~---~~~~~~~~~~~~~i~~qi~~aL~~LH--~~~~~~ivH~dlkp~NIll~~-~~~~kl~Dfg~a  560 (702)
                      ||||+++ +|.+.+.   .....+++..+..++.|++.||+|||  ++   +|+||||||+|||++. ++.+||+|||++
T Consensus       104 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a  179 (360)
T 3e3p_A          104 VMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFGSA  179 (360)
T ss_dssp             EEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCTTC
T ss_pred             Eeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCCCc
Confidence            9999987 5554443   23446889999999999999999999  88   9999999999999997 899999999999


Q ss_pred             eecCCCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHH-------
Q 038002          561 KLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYN-------  632 (702)
Q Consensus       561 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~-------  632 (702)
                      ........  .....||+.|+|||++.+. .++.++||||||+++|||++|+.||......   .........       
T Consensus       180 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~~~~~~  254 (360)
T 3e3p_A          180 KKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA---GQLHEIVRVLGCPSRE  254 (360)
T ss_dssp             BCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCCCCHH
T ss_pred             eecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH---HHHHHHHHHcCCCCHH
Confidence            87644332  2345689999999988654 5899999999999999999999999754211   111111100       


Q ss_pred             ---hhhcc--ccccc---------cccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          633 ---CFVAG--EFNKL---------VEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       633 ---~~~~~--~~~~~---------~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                         .....  .....         .........+..+.+++.+||+.||++|||++|+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          255 VLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence               00000  00000         0001122246789999999999999999999999974

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.96  E-value=4.8e-30  Score=280.33  Aligned_cols=226  Identities=17%  Similarity=0.194  Sum_probs=153.1

Q ss_pred             ceEEEeEE--EEEeeee----hhhhHhh-------------------------eeeEEEEE--ecCCeeEEEEecCCCCC
Q 038002          449 RKLLTVLA--GCLGSIT----FLCFLIA-------------------------ISSLLVYK--HRSSKKLLVYEFMSKGS  495 (702)
Q Consensus       449 ~~l~~g~~--v~~~~~~----~~~~avk-------------------------i~~l~~~~--~~~~~~~lV~e~~~~gs  495 (702)
                      ++||+|++  ||++...    ...||+|                         |++++.++  +.+...++||||+.+ +
T Consensus        27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-~  105 (405)
T 3rgf_A           27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-D  105 (405)
T ss_dssp             CCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE-E
T ss_pred             cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC-C
Confidence            46888888  8888744    2566666                         77788777  558899999999975 8


Q ss_pred             HHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE----eCCCcEEEecccceeec
Q 038002          496 LADLLFNL--------ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI----DDSWRAKISDFGLAKLL  563 (702)
Q Consensus       496 L~~~l~~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll----~~~~~~kl~Dfg~a~~~  563 (702)
                      |.+++...        ...+++.+++.++.||+.||+|||++   +|+||||||+|||+    +.++.+||+|||+++..
T Consensus       106 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~  182 (405)
T 3rgf_A          106 LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  182 (405)
T ss_dssp             HHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--
T ss_pred             HHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCceec
Confidence            88887532        12488999999999999999999999   99999999999999    67789999999999876


Q ss_pred             CCCCC--ceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcc------hhhhHHHHHHhh
Q 038002          564 MPNQT--GIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTAD------EVLLSTWVYNCF  634 (702)
Q Consensus       564 ~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~------~~~~~~~~~~~~  634 (702)
                      .....  .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........      ...+.. +....
T Consensus       183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~-i~~~~  261 (405)
T 3rgf_A          183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR-IFNVM  261 (405)
T ss_dssp             --------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHH-HHHHH
T ss_pred             CCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHH-HHHhh
Confidence            43221  22345678999999998876 4589999999999999999999999975422100      000100 00000


Q ss_pred             h---cccccccc-------------cc------------ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          635 V---AGEFNKLV-------------EE------------EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       635 ~---~~~~~~~~-------------~~------------~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .   ...+....             ..            .........+.+|+.+||+.||++|||++|+++.
T Consensus       262 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h  334 (405)
T 3rgf_A          262 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD  334 (405)
T ss_dssp             CCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            0   00000000             00            0000114578899999999999999999999974

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.96  E-value=1.8e-29  Score=266.92  Aligned_cols=198  Identities=22%  Similarity=0.268  Sum_probs=152.2

Q ss_pred             eeeEEEEEe-----cCCeeEEEEecCCCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcE
Q 038002          471 ISSLLVYKH-----RSSKKLLVYEFMSKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI  544 (702)
Q Consensus       471 i~~l~~~~~-----~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  544 (702)
                      |+++++++.     .+...++||||++ |+|.+++.... ..+++.++..++.||+.||+|||++   ||+||||||+||
T Consensus        76 i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Ni  151 (326)
T 1blx_A           76 VVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNI  151 (326)
T ss_dssp             BCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred             eEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHe
Confidence            667777665     6788999999998 59999998754 3489999999999999999999999   999999999999


Q ss_pred             EEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       545 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      +++.++.+||+|||++.......  ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.....   ..
T Consensus       152 li~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~  226 (326)
T 1blx_A          152 LVTSSGQIKLADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD---VD  226 (326)
T ss_dssp             EECTTCCEEECSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HH
T ss_pred             EEcCCCCEEEecCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH---HH
Confidence            99999999999999998653222  23345689999999999888999999999999999999999999975421   11


Q ss_pred             hhHHHHHHhhhc---cccccc--------------cccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          625 LLSTWVYNCFVA---GEFNKL--------------VEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       625 ~~~~~~~~~~~~---~~~~~~--------------~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .... .......   ..+...              ............+.+++.+||+.||++|||++|+++
T Consensus       227 ~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          227 QLGK-ILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             HHHH-HHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHH-HHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            1111 1110000   000000              000122334667889999999999999999999995

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.96  E-value=5.9e-30  Score=275.12  Aligned_cols=203  Identities=20%  Similarity=0.167  Sum_probs=143.1

Q ss_pred             eeeEEEEE-----ecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEE
Q 038002          471 ISSLLVYK-----HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL  545 (702)
Q Consensus       471 i~~l~~~~-----~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIl  545 (702)
                      |++++.++     ......++||||++ |+|.+++......+++.++..++.||+.||+|||++   +|+||||||+||+
T Consensus        91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl  166 (362)
T 3pg1_A           91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL  166 (362)
T ss_dssp             BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence            56666666     33457899999997 689999887766799999999999999999999999   9999999999999


Q ss_pred             EeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchh
Q 038002          546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEV  624 (702)
Q Consensus       546 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~  624 (702)
                      ++.++.+||+|||++.......  ......+|+.|+|||.+.+ ..++.++||||||+++|+|++|+.||..........
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~  244 (362)
T 3pg1_A          167 LADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN  244 (362)
T ss_dssp             ECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             EcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            9999999999999997543322  2334568999999998876 678999999999999999999999997542111000


Q ss_pred             hhHHHH---------------HHhhhccccccccc---cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          625 LLSTWV---------------YNCFVAGEFNKLVE---EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       625 ~~~~~~---------------~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ......               ..............   ..........+.+++.+||+.||++|||++|+++.
T Consensus       245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            000000               00000000000000   01222345678999999999999999999999974

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.96  E-value=5.8e-30  Score=269.45  Aligned_cols=192  Identities=23%  Similarity=0.331  Sum_probs=145.3

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++++++.+++..++||| +.+++|.+++.... .+++.++..++.||++||+|||++   +|+||||||+||++++ +
T Consensus        90 iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~  163 (313)
T 3cek_A           90 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-G  163 (313)
T ss_dssp             BCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-T
T ss_pred             eEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-C
Confidence            7788899999999999999 66889999998765 789999999999999999999999   9999999999999975 8


Q ss_pred             cEEEecccceeecCCCCCc-eeeceeccccccCcccccC-----------CCCCccccccchhHhHHHhhhCCcCCcCCC
Q 038002          551 RAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNS-----------GLITVKSDVYSFGVVLLEIICCRSNFEVNV  618 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlGvil~elltG~~Pf~~~~  618 (702)
                      .+||+|||++......... ......|++.|+|||.+.+           ..++.++||||||+++|||++|+.||....
T Consensus       164 ~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  243 (313)
T 3cek_A          164 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  243 (313)
T ss_dssp             EEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             eEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence            9999999999876443321 2234568999999998865           468889999999999999999999996432


Q ss_pred             CCcchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          619 STADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ...  ...     ..........    ..+......+.+++.+||+.||++||+++|+++.
T Consensus       244 ~~~--~~~-----~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          244 NQI--SKL-----HAIIDPNHEI----EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             SHH--HHH-----HHHHCTTSCC----CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHH--HHH-----HHHHhccccc----CCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            111  111     1111111111    1112224678899999999999999999999874

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.96  E-value=2.7e-30  Score=273.16  Aligned_cols=182  Identities=24%  Similarity=0.344  Sum_probs=150.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCC-CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe-C
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSK-GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID-D  548 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~-~  548 (702)
                      |+++++++.+++..++|||++.+ ++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++ .
T Consensus       110 i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~  185 (320)
T 3a99_A          110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLN  185 (320)
T ss_dssp             BCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETT
T ss_pred             ceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCC
Confidence            67788999999999999999986 89999997654 789999999999999999999999   999999999999999 7


Q ss_pred             CCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCC-CccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLI-TVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      ++.+||+|||++.......   .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||...    ...   
T Consensus       186 ~~~~kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~----~~~---  255 (320)
T 3a99_A          186 RGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EEI---  255 (320)
T ss_dssp             TTEEEECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----HHH---
T ss_pred             CCCEEEeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh----hhh---
Confidence            8899999999998764322   234568999999998876655 68899999999999999999999532    100   


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                             .....      ..+...++.+.+++.+||+.||++|||++||++.
T Consensus       256 -------~~~~~------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          256 -------IRGQV------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             -------HHCCC------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -------hcccc------cccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                   00000      0112234678899999999999999999999873

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.96  E-value=8.1e-30  Score=280.43  Aligned_cols=219  Identities=23%  Similarity=0.257  Sum_probs=159.7

Q ss_pred             ccccceEEEeEE---EEEeeeehhhhHhh-------------------------eeeEEEEEecCCeeEEEEecCCCCCH
Q 038002          445 VNDKRKLLTVLA---GCLGSITFLCFLIA-------------------------ISSLLVYKHRSSKKLLVYEFMSKGSL  496 (702)
Q Consensus       445 ~~~~~~l~~g~~---v~~~~~~~~~~avk-------------------------i~~l~~~~~~~~~~~lV~e~~~~gsL  496 (702)
                      +...+.||+|++   ++.+......||||                         |++++..+++++..|+||||+. |+|
T Consensus        26 y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L  104 (432)
T 3p23_A           26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATL  104 (432)
T ss_dssp             EEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEH
T ss_pred             EecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCH
Confidence            344567777776   33333334666666                         8889999999999999999996 599


Q ss_pred             HHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC-----CCcEEEecccceeecCCCCC--c
Q 038002          497 ADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD-----SWRAKISDFGLAKLLMPNQT--G  569 (702)
Q Consensus       497 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~-----~~~~kl~Dfg~a~~~~~~~~--~  569 (702)
                      .+++........+.++..++.||+.||+|||++   +|+||||||+|||++.     ...+||+|||+++.......  .
T Consensus       105 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~  181 (432)
T 3p23_A          105 QEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFS  181 (432)
T ss_dssp             HHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--------
T ss_pred             HHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCccee
Confidence            999987765566667789999999999999999   9999999999999943     33688999999987653322  2


Q ss_pred             eeeceeccccccCccccc---CCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhcccccccccc
Q 038002          570 IVAGVRGSRGYMAPEWQN---SGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE  645 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  645 (702)
                      ......||+.|+|||++.   ...++.++|||||||++|||++ |..||......  ..   .   ........ ...  
T Consensus       182 ~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--~~---~---~~~~~~~~-~~~--  250 (432)
T 3p23_A          182 RRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--QA---N---ILLGACSL-DCL--  250 (432)
T ss_dssp             ----CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH--HH---H---HHTTCCCC-TTS--
T ss_pred             eccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH--HH---H---HHhccCCc-ccc--
Confidence            234467999999999887   4567889999999999999999 99999643111  00   0   00011111 111  


Q ss_pred             ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          646 EVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       646 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .........+.+++.+||+.||++|||++||++
T Consensus       251 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          251 HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            112345667889999999999999999999984

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.96  E-value=1.1e-29  Score=271.20  Aligned_cols=195  Identities=21%  Similarity=0.324  Sum_probs=153.5

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHH------hhcC-CCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADL------LFNL-ETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLR  542 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~------l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~  542 (702)
                      |+++++++.+++..++||||+++++|.++      +... ...+++.++..++.||+.||+|||+ +   +|+|+||||+
T Consensus       105 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~  181 (348)
T 2pml_X          105 CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPS  181 (348)
T ss_dssp             BCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGG
T ss_pred             cceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChH
Confidence            67777888999999999999999999998      6543 3468999999999999999999999 8   9999999999


Q ss_pred             cEEEeCCCcEEEecccceeecCCCCCceeeceeccccccCcccccCC-CCCc-cccccchhHhHHHhhhCCcCCcCCCCC
Q 038002          543 NILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG-LITV-KSDVYSFGVVLLEIICCRSNFEVNVST  620 (702)
Q Consensus       543 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DiwSlGvil~elltG~~Pf~~~~~~  620 (702)
                      ||+++.++.+||+|||++......   ......|++.|+|||.+.+. .++. ++||||||+++|||++|+.||......
T Consensus       182 Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  258 (348)
T 2pml_X          182 NILMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL  258 (348)
T ss_dssp             GEEECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS
T ss_pred             hEEEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH
Confidence            999999999999999999876433   33456789999999998876 6666 999999999999999999999754221


Q ss_pred             cchhhhHHHHHHhhhccccccccc-------------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          621 ADEVLLSTWVYNCFVAGEFNKLVE-------------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       621 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .+       .......+.......             .......+..+.+++.+||+.||++|||++|+++
T Consensus       259 ~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          259 VE-------LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             HH-------HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HH-------HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            11       111111111110000             0011334668899999999999999999999987

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.96  E-value=2.8e-30  Score=278.25  Aligned_cols=227  Identities=19%  Similarity=0.210  Sum_probs=150.6

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecC------Ce
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRS------SK  483 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~------~~  483 (702)
                      +.++..+.||+|++  ||++....  ..||+|                             |+++++++...      ..
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  108 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND  108 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence            34556678888887  88876433  556665                             66777777543      67


Q ss_pred             eEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          484 KLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                      .|+|||++ +++|.+++..  ..+++..+..++.||++||+|||++   +|+||||||+||+++.++.+||+|||+++..
T Consensus       109 ~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~  182 (367)
T 2fst_X          109 VYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT  182 (367)
T ss_dssp             CEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred             EEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence            89999999 7899999865  3699999999999999999999999   9999999999999999999999999999865


Q ss_pred             CCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHH-------HHhhh
Q 038002          564 MPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV-------YNCFV  635 (702)
Q Consensus       564 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~-------~~~~~  635 (702)
                      ...    .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+....       .....
T Consensus       183 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~  258 (367)
T 2fst_X          183 ADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS  258 (367)
T ss_dssp             ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCC
T ss_pred             ccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence            322    334578999999998876 678999999999999999999999997542111000000000       00000


Q ss_pred             cccccccc---c-------cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          636 AGEFNKLV---E-------EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       636 ~~~~~~~~---~-------~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .......+   .       ..........+.+|+.+||+.||++|||++|+++.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence            00000000   0       01111235678999999999999999999999874

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.96  E-value=1.9e-29  Score=262.06  Aligned_cols=219  Identities=23%  Similarity=0.247  Sum_probs=167.6

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEe
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      +.++..+.||+|++  ||++....  ..||+|                             |+++++++.+++..++|||
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  101 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence            34555667777766  77766532  445554                             7888899999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC---CcEEEecccceeecCCC
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS---WRAKISDFGLAKLLMPN  566 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~  566 (702)
                      |+++++|.+++.... .+++.++..++.||+.||+|||++   +|+|+||||+||+++.+   +.+||+|||++......
T Consensus       102 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~  177 (287)
T 2wei_A          102 LYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN  177 (287)
T ss_dssp             CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred             ccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence            999999999987654 689999999999999999999999   99999999999999654   46999999999866433


Q ss_pred             CCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          567 QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       567 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                      ..  .....+++.|+|||.+.+ .++.++||||||+++|+|++|..||....    ....    ......+......  .
T Consensus       178 ~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~~~~----~~~~~~~~~~~~~--~  244 (287)
T 2wei_A          178 TK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN----EYDI----LKRVETGKYAFDL--P  244 (287)
T ss_dssp             SS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHH----HHHHHHCCCCCCS--G
T ss_pred             Cc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC----HHHH----HHHHHcCCCCCCc--h
Confidence            22  233458999999998875 48899999999999999999999996531    1111    1111111111111  1


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .....+..+.+++.+||+.||++|||++|+++
T Consensus       245 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          245 QWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            11223567889999999999999999999987

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.96  E-value=1.9e-29  Score=265.72  Aligned_cols=219  Identities=18%  Similarity=0.229  Sum_probs=154.1

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      .++..+.||+|++  ||++....  ..||+|                             |+++++++.+++..++||||
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~  105 (318)
T 2dyl_A           26 DLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL  105 (318)
T ss_dssp             GEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEec
Confidence            3444567777777  77776542  455555                             88899999999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      + ++.+..++......+++..+..++.||++||+|||+ +   +|+|+||||+||+++.++.+||+|||++........ 
T Consensus       106 ~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-  180 (318)
T 2dyl_A          106 M-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA-  180 (318)
T ss_dssp             C-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred             c-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc-
Confidence            9 566776666545578999999999999999999998 6   899999999999999999999999999976543222 


Q ss_pred             eeeceeccccccCccccc-----CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          570 IVAGVRGSRGYMAPEWQN-----SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                       .....+++.|+|||.+.     ...++.++||||||+++|||++|+.||......  ....     ........... .
T Consensus       181 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~-----~~~~~~~~~~~-~  251 (318)
T 2dyl_A          181 -KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD--FEVL-----TKVLQEEPPLL-P  251 (318)
T ss_dssp             -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH--HHHH-----HHHHHSCCCCC-C
T ss_pred             -ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc--HHHH-----HHHhccCCCCC-C
Confidence             23456899999999884     456889999999999999999999999753111  1111     11111111111 1


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                        .....+..+.+++.+||+.||++||+++|+++
T Consensus       252 --~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          252 --GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             --SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             --ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence              01123567889999999999999999999886

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.96  E-value=1.9e-29  Score=272.34  Aligned_cols=223  Identities=18%  Similarity=0.164  Sum_probs=164.0

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCee-----
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKK-----  484 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~-----  484 (702)
                      ..+...+.||+|++  ||++....  ..||+|                             |+++++++...+..     
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  121 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  121 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence            34455678999987  88886543  566766                             67777888777665     


Q ss_pred             -EEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          485 -LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       485 -~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                       ++||||+. ++|.+++..   .+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++...
T Consensus       122 ~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~  194 (371)
T 4exu_A          122 FYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHA  194 (371)
T ss_dssp             CEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred             EEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence             99999997 589888743   589999999999999999999999   9999999999999999999999999999865


Q ss_pred             CCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhh-hccc---
Q 038002          564 MPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF-VAGE---  638 (702)
Q Consensus       564 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~-~~~~---  638 (702)
                      ...    .....||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||.......   .+........ ....   
T Consensus       195 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~  267 (371)
T 4exu_A          195 DAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD---QLTQILKVTGVPGTEFVQ  267 (371)
T ss_dssp             ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCHHHHT
T ss_pred             ccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCcHHHHH
Confidence            322    234568999999998876 688999999999999999999999997542111   1111000000 0000   


Q ss_pred             -------------cccccc---cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          639 -------------FNKLVE---EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       639 -------------~~~~~~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                                   +.....   ..........+.+++.+||+.||++|||++|+++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence                         000000   01122346788999999999999999999999874

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.96  E-value=2.3e-29  Score=269.43  Aligned_cols=232  Identities=19%  Similarity=0.182  Sum_probs=169.3

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecC-----Cee
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRS-----SKK  484 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~-----~~~  484 (702)
                      .+.+...+.||+|++  ||++....  ..||+|                            |+++++++..+     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            345666788999987  88877652  556666                            66777665543     789


Q ss_pred             EEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecC
Q 038002          485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLM  564 (702)
Q Consensus       485 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~  564 (702)
                      ++||||+. ++|.+++...  .+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++....
T Consensus        90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIID  163 (353)
T ss_dssp             EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence            99999997 5999998763  689999999999999999999999   99999999999999999999999999998764


Q ss_pred             CCCCc---------eeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhh
Q 038002          565 PNQTG---------IVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF  634 (702)
Q Consensus       565 ~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~  634 (702)
                      .....         ......||+.|+|||++.. ..++.++||||||+++|||++|+.||.......   .+.. .....
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~-~~~~~  239 (353)
T 2b9h_A          164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH---QLLL-IFGII  239 (353)
T ss_dssp             ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHH-HHHHH
T ss_pred             cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH---HHHH-HHHHh
Confidence            32211         1223568999999997654 678999999999999999999999997542110   0000 00000


Q ss_pred             hcc-------------------cccccc---ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhCC
Q 038002          635 VAG-------------------EFNKLV---EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL--MLEGT  683 (702)
Q Consensus       635 ~~~-------------------~~~~~~---~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~--~Le~~  683 (702)
                      ...                   .+....   ........+..+.+++.+||+.||++|||++|+++  .++..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (353)
T 2b9h_A          240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY  312 (353)
T ss_dssp             CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence            000                   000000   00112234567889999999999999999999997  34443

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.96  E-value=1.2e-29  Score=266.77  Aligned_cols=182  Identities=25%  Similarity=0.375  Sum_probs=145.9

Q ss_pred             eeeEEEEEecCCeeEEEEec-CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe-C
Q 038002          471 ISSLLVYKHRSSKKLLVYEF-MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID-D  548 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~-~  548 (702)
                      |+++++++..++..++|||+ +.+++|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+||+++ .
T Consensus       100 i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~  175 (312)
T 2iwi_A          100 VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLR  175 (312)
T ss_dssp             BCCEEEEC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETT
T ss_pred             eeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCC
Confidence            66777888889999999999 78999999998754 689999999999999999999999   999999999999999 8


Q ss_pred             CCcEEEecccceeecCCCCCceeeceeccccccCcccccCCCC-CccccccchhHhHHHhhhCCcCCcCCCCCcchhhhH
Q 038002          549 SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLI-TVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS  627 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~  627 (702)
                      ++.+||+|||++.......   .....|++.|+|||++.+..+ +.++||||||+++|||++|+.||...    ...   
T Consensus       176 ~~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~----~~~---  245 (312)
T 2iwi_A          176 RGCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD----QEI---  245 (312)
T ss_dssp             TTEEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----HHH---
T ss_pred             CCeEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh----HHH---
Confidence            8999999999998764432   234568999999998876655 45899999999999999999999532    100   


Q ss_pred             HHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                             .....      ..+......+.+++.+||+.||++|||++|+++.
T Consensus       246 -------~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          246 -------LEAEL------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             -------HHTCC------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             -------hhhcc------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                   00000      1122345678899999999999999999999983

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.96  E-value=1.8e-29  Score=267.50  Aligned_cols=223  Identities=24%  Similarity=0.281  Sum_probs=151.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEe
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      +.++..+.||+|++  ||++....  ..||+|                             |+++++++..++..++|||
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e  101 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME  101 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence            44556678899887  88777652  566666                             8888999999999999999


Q ss_pred             cCCCCCHHHHhhc----CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCC
Q 038002          490 FMSKGSLADLLFN----LETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMP  565 (702)
Q Consensus       490 ~~~~gsL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~  565 (702)
                      |+++ +|.+++..    ....+++..+..++.|++.||+|||++  .+|+||||||+||+++.++.+||+|||++.....
T Consensus       102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~  178 (327)
T 3aln_A          102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD  178 (327)
T ss_dssp             CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred             ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence            9985 88887763    234689999999999999999999994  2899999999999999999999999999986643


Q ss_pred             CCCceeeceeccccccCcccc----cCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccc
Q 038002          566 NQTGIVAGVRGSRGYMAPEWQ----NSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNK  641 (702)
Q Consensus       566 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  641 (702)
                      ...  .....|++.|+|||.+    .+..++.++||||||+++|||++|+.||.......+.       ......+....
T Consensus       179 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-------~~~~~~~~~~~  249 (327)
T 3aln_A          179 SIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ-------LTQVVKGDPPQ  249 (327)
T ss_dssp             -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSCCCC
T ss_pred             ccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH-------HHHHhcCCCCC
Confidence            322  2334689999999988    4567899999999999999999999999753211110       00111111111


Q ss_pred             ccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          642 LVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       642 ~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       +...........+.+++.+||+.||++||+++|+++
T Consensus       250 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          250 -LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             -CCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             -CCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence             111112234567899999999999999999999865

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.96  E-value=1.6e-29  Score=266.32  Aligned_cols=227  Identities=18%  Similarity=0.200  Sum_probs=160.3

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEE-------------
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYK-------------  478 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~-------------  478 (702)
                      ..++..+.||+|++  ||++....  ..||+|                           |+++++++             
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            44556677788877  77776543  455655                           66777665             


Q ss_pred             -ecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe-CCCcEEEec
Q 038002          479 -HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID-DSWRAKISD  556 (702)
Q Consensus       479 -~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~-~~~~~kl~D  556 (702)
                       .+.+..++||||++ |+|.+++..  ..+++.++..++.||+.||+|||++   +|+||||||+||+++ +++.+||+|
T Consensus        91 ~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~D  164 (320)
T 2i6l_A           91 LTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGD  164 (320)
T ss_dssp             CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred             ccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEcc
Confidence             34578999999998 599999965  3688999999999999999999999   999999999999997 567999999


Q ss_pred             ccceeecCCCCC--ceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHh
Q 038002          557 FGLAKLLMPNQT--GIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNC  633 (702)
Q Consensus       557 fg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~  633 (702)
                      ||++........  .......+++.|+|||.+.. ..++.++||||||+++|||++|+.||......   ..........
T Consensus       165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---~~~~~~~~~~  241 (320)
T 2i6l_A          165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL---EQMQLILESI  241 (320)
T ss_dssp             CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHS
T ss_pred             CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHhc
Confidence            999987643221  12233457899999998755 67899999999999999999999999754211   1111100000


Q ss_pred             ----------hhc-------cccccccc--cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          634 ----------FVA-------GEFNKLVE--EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       634 ----------~~~-------~~~~~~~~--~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                                ...       ........  .......+..+.+++.+||+.||++|||++|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence                      000       00000000  0112234678999999999999999999999987

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.95  E-value=7.5e-29  Score=265.69  Aligned_cols=222  Identities=18%  Similarity=0.165  Sum_probs=162.4

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCe------e
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSK------K  484 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~------~  484 (702)
                      .+...+.||+|++  ||++....  ..||+|                             |+++++++...+.      .
T Consensus        25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~  104 (353)
T 3coi_A           25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF  104 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred             eEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeE
Confidence            3455678888887  88776543  556665                             6777777776654      4


Q ss_pred             EEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecC
Q 038002          485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLM  564 (702)
Q Consensus       485 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~  564 (702)
                      ++||||+. ++|.+++..   .+++.++..++.||+.||+|||++   +|+||||||+||+++.++.+||+|||++....
T Consensus       105 ~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  177 (353)
T 3coi_A          105 YLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD  177 (353)
T ss_dssp             EEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred             EEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence            99999997 588888743   589999999999999999999999   99999999999999999999999999997653


Q ss_pred             CCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHH----------h
Q 038002          565 PNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYN----------C  633 (702)
Q Consensus       565 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~----------~  633 (702)
                      ..    .....+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||.......   .+......          .
T Consensus       178 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~  250 (353)
T 3coi_A          178 AE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD---QLTQILKVTGVPGTEFVQK  250 (353)
T ss_dssp             ----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH---HHHHHHHHHCBCCHHHHTT
T ss_pred             CC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHHHHH
Confidence            22    234568999999998876 678999999999999999999999997542110   11100000          0


Q ss_pred             hhcc-------ccccccc---cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          634 FVAG-------EFNKLVE---EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       634 ~~~~-------~~~~~~~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ....       .+.....   ..........+.+++.+||+.||++|||++|+++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            0000       0000000   01223456789999999999999999999999863

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.95  E-value=3.7e-29  Score=273.91  Aligned_cols=168  Identities=16%  Similarity=0.187  Sum_probs=131.0

Q ss_pred             eeEEEEecCCCCCHHHHhh------cCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEec
Q 038002          483 KKLLVYEFMSKGSLADLLF------NLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISD  556 (702)
Q Consensus       483 ~~~lV~e~~~~gsL~~~l~------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D  556 (702)
                      ..+++|+++ +++|.+++.      .....+++..++.++.||++||+|||++   +|+||||||+|||++.++.+||+|
T Consensus       179 ~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDiKp~NILl~~~~~~kL~D  254 (413)
T 3dzo_A          179 SRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLRPVDIVLDQRGGVFLTG  254 (413)
T ss_dssp             SEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECC
T ss_pred             ceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcccceEEEecCCeEEEEe
Confidence            457777766 679999984      2233477888999999999999999999   999999999999999999999999


Q ss_pred             ccceeecCCCCCceeeceeccccccCcccc----------cCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          557 FGLAKLLMPNQTGIVAGVRGSRGYMAPEWQ----------NSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       557 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                      ||+++.....    .....| +.|+|||++          ....++.++|||||||++|||++|+.||........    
T Consensus       255 FG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~----  325 (413)
T 3dzo_A          255 FEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGG----  325 (413)
T ss_dssp             GGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSC----
T ss_pred             ccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhh----
Confidence            9998865322    344567 999999988          556688999999999999999999999965421110    


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVI  677 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl  677 (702)
                                  ....+..  ....++.+.+++.+||+.||++||++.+++
T Consensus       326 ------------~~~~~~~--~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          326 ------------SEWIFRS--CKNIPQPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             ------------SGGGGSS--CCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             ------------HHHHHhh--cccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence                        0000110  012246789999999999999999976654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.95  E-value=9.5e-28  Score=250.92  Aligned_cols=207  Identities=19%  Similarity=0.193  Sum_probs=153.7

Q ss_pred             ceEEEeEE--EEEeeeeh--hhhHhh-----------------------eeeEEEEEec----CCeeEEEEecCCCCCHH
Q 038002          449 RKLLTVLA--GCLGSITF--LCFLIA-----------------------ISSLLVYKHR----SSKKLLVYEFMSKGSLA  497 (702)
Q Consensus       449 ~~l~~g~~--v~~~~~~~--~~~avk-----------------------i~~l~~~~~~----~~~~~lV~e~~~~gsL~  497 (702)
                      +.||+|++  ||++....  ..||+|                       |++++.++..    +...++||||+++++|.
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~  103 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELF  103 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHH
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHH
Confidence            56888877  88876643  567776                       7777877766    78899999999999999


Q ss_pred             HHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC---CCcEEEecccceeecCCCCCceeec
Q 038002          498 DLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD---SWRAKISDFGLAKLLMPNQTGIVAG  573 (702)
Q Consensus       498 ~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~~~~~~~~  573 (702)
                      +++.... ..+++.++..++.||+.||+|||++   +|+||||||+||+++.   ++.+||+|||++....         
T Consensus       104 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---------  171 (299)
T 3m2w_A          104 SRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---------  171 (299)
T ss_dssp             HHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT---------
T ss_pred             HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc---------
Confidence            9998764 3589999999999999999999999   9999999999999988   7889999999987532         


Q ss_pred             eeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHH
Q 038002          574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLE  653 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  653 (702)
                                    +..++.++||||||+++|||++|+.||............    .........  ..........+.
T Consensus       172 --------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~  231 (299)
T 3m2w_A          172 --------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM----KTRIRMGQY--EFPNPEWSEVSE  231 (299)
T ss_dssp             --------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCS----CCSSCTTCC--SSCHHHHTTSCH
T ss_pred             --------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH----HHHHhhccc--cCCchhcccCCH
Confidence                          234678999999999999999999999654211100000    000000000  000000122456


Q ss_pred             HHHHHHHHcccCCCCCCCCHHHHHH--HHhCCcCCC
Q 038002          654 RMVKTGLLCIQDEPNLRPSMKNVIL--MLEGTMEIP  687 (702)
Q Consensus       654 ~l~~li~~cL~~dP~~RPt~~evl~--~Le~~~~~~  687 (702)
                      .+.+++.+||+.||++|||++|+++  .+.+....+
T Consensus       232 ~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~~  267 (299)
T 3m2w_A          232 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP  267 (299)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGSC
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhcChhhcccccCC
Confidence            7899999999999999999999997  344444333

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.95  E-value=1.5e-28  Score=279.53  Aligned_cols=200  Identities=24%  Similarity=0.274  Sum_probs=148.1

Q ss_pred             eeeEEEEEec------CCeeEEEEecCCCCCHHHHhhcCCC--CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCC
Q 038002          471 ISSLLVYKHR------SSKKLLVYEFMSKGSLADLLFNLET--RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR  542 (702)
Q Consensus       471 i~~l~~~~~~------~~~~~lV~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~  542 (702)
                      |+++++++..      ++..++||||+++|+|.+++.....  .+++..+..++.||+.||+|||++   +|+||||||+
T Consensus        74 IV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~  150 (676)
T 3qa8_A           74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPE  150 (676)
T ss_dssp             BCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCST
T ss_pred             CCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHH
Confidence            6667666554      7888999999999999999987543  588999999999999999999999   9999999999


Q ss_pred             cEEEeCCCc---EEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCC
Q 038002          543 NILIDDSWR---AKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVS  619 (702)
Q Consensus       543 NIll~~~~~---~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~  619 (702)
                      ||+++.++.   +||+|||++.......  ......||+.|+|||.+.+..++.++||||||+++|+|++|..||.....
T Consensus       151 NILl~~~g~~~~vKL~DFG~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~  228 (676)
T 3qa8_A          151 NIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ  228 (676)
T ss_dssp             TEEEECCSSSCEEEECSCCCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH
T ss_pred             HeEeecCCCceeEEEccccccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc
Confidence            999997765   9999999998764333  23446789999999999999999999999999999999999999964311


Q ss_pred             Ccc------hhhhHHHHHHhhhccc--ccccc--ccccCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 038002          620 TAD------EVLLSTWVYNCFVAGE--FNKLV--EEEVDKITLERMVKTGLLCIQDEPNLRPSMKN  675 (702)
Q Consensus       620 ~~~------~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~e  675 (702)
                      ...      ..............+.  +....  ........+..+.+++.+||+.||++|||++|
T Consensus       229 ~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e  294 (676)
T 3qa8_A          229 PVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ  294 (676)
T ss_dssp             HHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred             hhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence            000      0000000000000000  00000  11344557889999999999999999999977

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.95  E-value=4e-28  Score=252.18  Aligned_cols=201  Identities=12%  Similarity=0.053  Sum_probs=154.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      .+++..+.||+|++  ||++....  ..||+|                              |+++++++.+++..|+||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            45666788888877  88887653  566766                              888999999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||++|++|.+++..   .....++..++.||+.||+|||++   ||+||||||+|||++.++.+||++++          
T Consensus       111 e~~~g~~L~~~l~~---~~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~----------  174 (286)
T 3uqc_A          111 EWIRGGSLQEVADT---SPSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA----------  174 (286)
T ss_dssp             ECCCEEEHHHHHTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred             EecCCCCHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc----------
Confidence            99999999999954   346667889999999999999999   99999999999999999999998443          


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                                 |++|       ++.++||||||+++|||++|+.||.............    . ...+...  ......
T Consensus       175 -----------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~----~-~~~~~~~--~~~~~~  229 (286)
T 3uqc_A          175 -----------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE----R-DTAGQPI--EPADID  229 (286)
T ss_dssp             -----------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC----B-CTTSCBC--CHHHHC
T ss_pred             -----------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH----H-HhccCCC--Chhhcc
Confidence                       3333       6899999999999999999999997652211100000    0 0000000  000122


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ...++.+.+++.+||+.||++| |++|+++.|+.+..
T Consensus       230 ~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~  265 (286)
T 3uqc_A          230 RDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA  265 (286)
T ss_dssp             TTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred             cCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence            3345678999999999999999 99999999987543

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.94  E-value=7e-28  Score=280.50  Aligned_cols=208  Identities=18%  Similarity=0.225  Sum_probs=161.6

Q ss_pred             ccccccceEEEeEE--EEEeeeeh---hhhHhh----------------------------eeeEEEEEecCCe-----e
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF---LCFLIA----------------------------ISSLLVYKHRSSK-----K  484 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~---~~~avk----------------------------i~~l~~~~~~~~~-----~  484 (702)
                      ..++..+.||+|++  ||++....   ..||||                            |++++.++...+.     .
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            45666778899887  88887642   556766                            7888888776555     7


Q ss_pred             EEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecC
Q 038002          485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLM  564 (702)
Q Consensus       485 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~  564 (702)
                      ||||||+++++|.+++..   .+++.+++.++.||+.||+|||++   +|+||||||+|||++.+ .+||+|||+++...
T Consensus       160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~  232 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN  232 (681)
T ss_dssp             EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred             EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence            999999999999988754   689999999999999999999999   99999999999999886 89999999998764


Q ss_pred             CCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          565 PNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       565 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      ..     ....||+.|+|||++.+.. +.++||||||+++|+|++|..||.......                 +.   .
T Consensus       233 ~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~-----------------~~---~  286 (681)
T 2pzi_A          233 SF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG-----------------LP---E  286 (681)
T ss_dssp             CC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS-----------------CC---T
T ss_pred             cC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc-----------------cc---c
Confidence            33     3456899999999887654 899999999999999999998886321100                 00   0


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHHhCC
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPS-MKNVILMLEGT  683 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt-~~evl~~Le~~  683 (702)
                      ..........+.+++.+||+.||++||+ ++++...|.+.
T Consensus       287 ~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          287 DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence            0011123467889999999999999995 66666666543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.93  E-value=1.9e-26  Score=245.14  Aligned_cols=173  Identities=13%  Similarity=0.079  Sum_probs=133.5

Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhh-hcCCCCeEecCCCCCcEEEeCCC---------
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLH-DECEVQIIHCDIKLRNILIDDSW---------  550 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~~~~ivH~dlkp~NIll~~~~---------  550 (702)
                      ++..||||||+++|++.+.+.+  ..+++.++..++.||+.||+||| ++   +|+||||||+|||++.++         
T Consensus       134 ~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~  208 (336)
T 2vuw_A          134 DDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLN  208 (336)
T ss_dssp             TTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEET
T ss_pred             cCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeecc
Confidence            6899999999999977776644  36899999999999999999999 89   999999999999999887         


Q ss_pred             -----------cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHh-HHHhhhCCcCCcCCC
Q 038002          551 -----------RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV-LLEIICCRSNFEVNV  618 (702)
Q Consensus       551 -----------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi-l~elltG~~Pf~~~~  618 (702)
                                 .+||+|||+++.....      ...||+.|+|||++.+.. +.++||||++++ .+++++|..||... 
T Consensus       209 ~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~-  280 (336)
T 2vuw_A          209 GKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV-  280 (336)
T ss_dssp             TEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH-
T ss_pred             CccccccCCCceEEEeeccccEecCCC------cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch-
Confidence                       8999999999876432      347999999999998766 899999998766 88899999998421 


Q ss_pred             CCcchhhhHHHHHHhhh-ccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 038002          619 STADEVLLSTWVYNCFV-AGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVI  677 (702)
Q Consensus       619 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl  677 (702)
                            ........... ................++.+.+|+.+||+.|     |++|++
T Consensus       281 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          281 ------LWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             ------HHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             ------hhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence                  00000111111 1111111112234567889999999999976     999988

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.89  E-value=6.7e-24  Score=240.64  Aligned_cols=135  Identities=19%  Similarity=0.120  Sum_probs=101.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |++++.++++++..||||||++|++|.++|...+ .++..   +|+.||+.||+|||++   |||||||||+|||+++++
T Consensus       304 i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg  376 (569)
T 4azs_A          304 APAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQ  376 (569)
T ss_dssp             CCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTS
T ss_pred             eeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCC
Confidence            7899999999999999999999999999998765 56544   5889999999999999   999999999999999999


Q ss_pred             cEEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCC
Q 038002          551 RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNF  614 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf  614 (702)
                      ++||+|||+|+....... .....+||+.|+|||++.+ .+..++|+||+|++++++.++..++
T Consensus       377 ~vKL~DFGlAr~~~~~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~  438 (569)
T 4azs_A          377 HARLIDFGSIVTTPQDCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW  438 (569)
T ss_dssp             CEEECCCTTEESCC---C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred             CEEEeecccCeeCCCCCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence            999999999987644332 2345679999999998875 4567899999999999988776654

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.84  E-value=1.1e-20  Score=165.54  Aligned_cols=110  Identities=18%  Similarity=0.240  Sum_probs=94.8

Q ss_pred             ccccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEcC
Q 038002           27 KSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTE  106 (702)
Q Consensus        27 ~~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~~  106 (702)
                      +++|.+||.|.++  ++|+ ++|.|+|+|+.+||.    |+|+   ..++||.||++.+  +.++.|+|+.||||||+|.
T Consensus         1 ~d~l~~g~~L~~g--~~l~-~~~~~~l~~~~dGnl----vl~~---~~~~vW~sn~~~~--~~~~~l~l~~dGNLVl~~~   68 (110)
T 3a0c_A            1 VNSLSSPNSLFTG--HSLE-VGPSYRLIMQGDCNF----VLYD---SGKPVWASNTGGL--GSGCRLTLHNNGNLVIYDQ   68 (110)
T ss_dssp             CCEEETTCEECTT--CEEE-ETTTEEEEECTTSCE----EEEE---TTEEEEECCCTTS--CSSCEEEECTTSCEEEECT
T ss_pred             CCEeCCCCEECCC--CEEE-ECCCEEEEEcCCCcE----EEEE---CCEEEEECCCCCC--CCcEEEEEeCCCCEEEECC
Confidence            3789999999987  7899 999999999988874    5676   3799999999865  4568999999999999999


Q ss_pred             CCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCc
Q 038002          107 ESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPT  151 (702)
Q Consensus       107 ~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PT  151 (702)
                      ++.++|+|.+....+..+++|+|+|||||++.   .+||||+||.
T Consensus        69 ~~~~~W~S~t~~~~g~~~l~l~~dGnlvl~~~---~~W~S~~~~~  110 (110)
T 3a0c_A           69 SNRVIWQTKTNGKEDHYVLVLQQDRNVVIYGP---VVWATGSGPA  110 (110)
T ss_dssp             TCCEEEECCCCCSSSCCEEEECTTSCEEEECS---EEEECSCCC-
T ss_pred             CCcEEEecCCCCCCCCEEEEEeCCccEEEECC---CEecCCCcCC
Confidence            89999999876555667899999999999974   7999999983

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=99.84  E-value=1.3e-20  Score=163.34  Aligned_cols=105  Identities=15%  Similarity=0.277  Sum_probs=89.8

Q ss_pred             ccccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEcC
Q 038002           27 KSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTE  106 (702)
Q Consensus        27 ~~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~~  106 (702)
                      .++|.+||.|.++  ++|+|  |.|.|.|+.++|.   .++.    ..++||+|||+.|. ...+.|+|+.||||||+|.
T Consensus         1 kn~L~~g~~L~~g--~~L~s--g~y~l~~q~DgNL---vly~----~~~~vW~ant~~~~-~~~~~L~l~~dGnLvL~d~   68 (105)
T 4h3o_A            1 RNILDNNEGLYAG--QSLDV--EPYHFIMQDDCNL---VLYD----HSTSTWASNTEIGG-KSGCSAVLQSDGNFVVYDS   68 (105)
T ss_dssp             CCEECTTEEECTT--CEEEE--TTEEEEECTTSCE---EEEE----TTEEEEECCCCCTT-CCSCEEEECTTSCEEEECT
T ss_pred             CCCcCCCCEEcCC--CEEEE--CCEEEEECCCCeE---EEEE----CCEEEEEecCCCCC-CccEEEEEeCCccEEEECC
Confidence            3789999999987  78988  7899999998873   3433    36899999999886 4568999999999999999


Q ss_pred             CCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeee
Q 038002          107 ESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWES  146 (702)
Q Consensus       107 ~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqS  146 (702)
                      +++++|+|++......++|+|+||||||||+.   .||||
T Consensus        69 ~~~~vWss~t~~~~~~~~l~L~ddGNlVly~~---~~W~S  105 (105)
T 4h3o_A           69 SGRSLWASHSTRGSGNYILILQDDGNVIIYGS---DIWST  105 (105)
T ss_dssp             TCCEEEECCCCCCSSCEEEEECTTSCEEEEES---EEEEC
T ss_pred             CcEEEEEecCCCCCCCEEEEEeCCCeEEEECC---cEecC
Confidence            99999999886556678899999999999964   69998

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.84  E-value=2.4e-20  Score=165.47  Aligned_cols=106  Identities=14%  Similarity=0.202  Sum_probs=93.1

Q ss_pred             ccccCCCCccccCCCCeeE--cCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEE
Q 038002           27 KSTISLGSSLSPSGQHSWN--SSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILK  104 (702)
Q Consensus        27 ~~~l~~g~~l~~~~~~~~~--s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~  104 (702)
                      .++|.+|++|.++  ++|+  |++|.|+|+|+.+|+.    +||++   +++||.||++.+  +.++.|+|+.||||||+
T Consensus         8 ~~~l~~g~~L~~g--~~l~~~S~~g~~~L~~~~dgnl----vly~~---~~~vW~sn~~~~--~~~~~l~l~~dGNLVl~   76 (119)
T 1b2p_A            8 QPDDNHPQILHAT--ESLEILFGTHVYRFIMQTDCNL----VLYDN---NNPIWATNTGGL--GNGCRAVLQPDGVLVVI   76 (119)
T ss_dssp             CSSSCCCCEEETT--CEEEEEETTEEEEEEECTTSCE----EEEET---TEEEEECCCTTS--CSSCEEEECTTSCEEEE
T ss_pred             CcccCCCCEEcCC--CEEEEeCCCCCEEEEEecCCCE----EEEEC---CEEEEeCCCccC--CCceEEEEccCCEEEEE
Confidence            4899999999987  7999  9999999999998873    57875   799999999865  55689999999999999


Q ss_pred             cCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeee
Q 038002          105 TEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWES  146 (702)
Q Consensus       105 ~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqS  146 (702)
                      |.++.++|+|.+....+...++|+|+|||||++   .++|||
T Consensus        77 d~~~~~lW~S~~~~~~g~~~l~l~~~Gnlvl~~---~~~W~S  115 (119)
T 1b2p_A           77 TNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYG---DALWAT  115 (119)
T ss_dssp             CTTCCEEEECSCCCCSSCEEEEECTTSCEEEEE---SEEEEC
T ss_pred             eCCCcEEEcCCCCCCCCCEEEEEECCCcEEEEC---ccEeCC
Confidence            998999999987544567789999999999997   389998

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.81  E-value=1.3e-19  Score=160.14  Aligned_cols=110  Identities=19%  Similarity=0.310  Sum_probs=92.8

Q ss_pred             ccccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEcC
Q 038002           27 KSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTE  106 (702)
Q Consensus        27 ~~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~~  106 (702)
                      .|+|.+||+|.++  ++|+  +|.|+|+|+.++|..    +|.   ..++||.||++.|  +.++.|+|+.||||||+|.
T Consensus         2 ~dtl~~gq~L~~g--~~L~--~g~~~L~~~~dgnlv----ly~---~~~~vW~sn~~~~--~~~~~l~l~~~GnLvl~d~   68 (115)
T 2dpf_A            2 DNVLLSGQTLHAD--HSLQ--AGAYTLTIQNKCNLV----KYQ---NGRQIWASNTDRR--GSGCRLTLLSDGNLVIYDH   68 (115)
T ss_dssp             CCEEETTCEEETT--EEEE--ETTEEEEECTTSCEE----EEE---TTEEEEECSCTTS--CSSCEEEECTTSCEEEECT
T ss_pred             CCEeCCCCEECCC--CEEE--CCCEEEEEcCCCcEE----EEe---CCEEEEeCCCCCC--CCceEEEECCCCcEEEECC
Confidence            3899999999987  7888  899999999888642    354   3789999999877  4568999999999999998


Q ss_pred             CCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCcc
Q 038002          107 ESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTD  152 (702)
Q Consensus       107 ~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTD  152 (702)
                      ++.++|+|.+....+..+++|+|+|||||++.   ++||||.+++.
T Consensus        69 ~~~~vW~S~~~~~~g~~~l~l~~dGnlvl~~~---~~W~S~~~~~~  111 (115)
T 2dpf_A           69 NNNDVWGSACWGDNGKYALVLQKDGRFVIYGP---VLWSLGPNGCR  111 (115)
T ss_dssp             TCCEEEECCCCCSSSCCEEEECTTSCEEEECS---EEECSSTTCBC
T ss_pred             CceEEEEcCCCCCCCCEEEEEeCCCeEEEECC---CEEECCCCCCc
Confidence            88999998875444567899999999999964   89999998764

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.80  E-value=1.3e-19  Score=159.57  Aligned_cols=110  Identities=17%  Similarity=0.313  Sum_probs=93.2

Q ss_pred             ccccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEcC
Q 038002           27 KSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTE  106 (702)
Q Consensus        27 ~~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~~  106 (702)
                      +|+|.+||+|.++  ++|  ++|.|+|+|+.+++.    +||.+   .++||.||+..+  +.++.|+|+.||||||+| 
T Consensus         1 tdtl~~gq~L~~g--~~L--~~~~~~L~~~~dgnl----vl~~~---~~~vW~sn~~~~--~~~~~l~l~~~GNLvl~d-   66 (112)
T 1xd5_A            1 SDRLNSGHQLDTG--GSL--AEGGYLFIIQNDCNL----VLYDN---NRAVWASGTNGK--ASGCVLKMQNDGNLVIYS-   66 (112)
T ss_dssp             CCEEETTEEECTT--CEE--EETTEEEEECTTSCE----EEEET---TEEEEECCCTTS--CSSEEEEECTTSCEEEEE-
T ss_pred             CCCCCCCCEECCC--CEE--eCCCEEEEEcCCCcE----EEEEC---CEEEEeCCCcCC--CCCEEEEEeCCCCEEEEc-
Confidence            4899999999987  788  589999999998874    24654   689999999753  456899999999999999 


Q ss_pred             CCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCC
Q 038002          107 ESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTP  150 (702)
Q Consensus       107 ~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~P  150 (702)
                      ++.++|+|.+....+..+++|+++|||||++..+.++||||++.
T Consensus        67 ~~~~~W~S~~~~~~g~~~l~l~~dGnlvl~~~~~~~~W~S~~~~  110 (112)
T 1xd5_A           67 GSRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHTNV  110 (112)
T ss_dssp             TTEEEEECCCCCSCCCCEEEECTTSCEEEECTTSCEEEECCCCC
T ss_pred             CCEEEEECCccCCCCCEEEEEeCCCcEEEECCCCceEEECCCcc
Confidence            78899998875445567899999999999987788999999985

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.75  E-value=3.4e-18  Score=149.43  Aligned_cols=103  Identities=17%  Similarity=0.292  Sum_probs=86.5

Q ss_pred             cccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEcCC
Q 038002           28 STISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEE  107 (702)
Q Consensus        28 ~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~~~  107 (702)
                      ++|.+||.|.++  ++|+  +|.|+|+|+.+||.. |   |..   .++||.+|+..+  +.++.|+|+.||||||+|.+
T Consensus         2 ntL~~gq~L~~g--~~L~--~g~~~L~~q~dGnLv-l---y~~---~~~vW~snt~~~--~~~~~l~l~~dGNLvl~~~~   68 (109)
T 3dzw_A            2 NILYSGETLSPG--EFLN--NGRYVFIMQEDCNLV-L---YDV---DKPIWATNTGGL--DRRCHLSMQSDGNLVVYSPR   68 (109)
T ss_dssp             CEEETTEEECTT--CEEE--ETTEEEEECTTSCEE-E---EET---TEEEEECCCTTS--SSSCEEEECTTSCEEEECTT
T ss_pred             CCcCCCCEeCCC--CEEE--CCCEEEEEcCCCcEE-E---EeC---CEEEEECCcccC--CCCEEEEEeCCCCEEEECCC
Confidence            689999999877  7886  799999999888742 2   543   589999999865  45689999999999999988


Q ss_pred             CCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeee
Q 038002          108 SKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWES  146 (702)
Q Consensus       108 ~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqS  146 (702)
                      +.++|+|++.......+|+|+||||||||++   +||||
T Consensus        69 ~~~~W~S~t~~~~~~~~~~L~ddGNlvly~~---~~W~s  104 (109)
T 3dzw_A           69 NNPIWASNTGGENGNYVCVLQKDRNVVIYGT---ARWAT  104 (109)
T ss_dssp             SCEEEECCCCCSSSCEEEEECTTSCEEEEES---CCCCC
T ss_pred             CCEEEECCCCCCCCCEEEEEeCCCEEEEECC---CEEeC
Confidence            8999999875444457899999999999974   89998

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.73  E-value=2.4e-19  Score=202.06  Aligned_cols=130  Identities=18%  Similarity=0.242  Sum_probs=109.4

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW  550 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  550 (702)
                      |+++..++..+++.||||||+++++|.+++..         +..++.|+++||+|||++   +|+||||||+|||++.  
T Consensus       401 Iv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--  466 (540)
T 3en9_A          401 IPAPYIFDVDLDNKRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--  466 (540)
T ss_dssp             CCCCCEEEEETTTTEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--
T ss_pred             cCceEEEEEeCCccEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--
Confidence            55445555577788999999999999999975         568999999999999999   9999999999999998  


Q ss_pred             cEEEecccceeecCCCCCce------eeceeccccccCcccccC--CCCCccccccchhHhHHHhhhCCcCC
Q 038002          551 RAKISDFGLAKLLMPNQTGI------VAGVRGSRGYMAPEWQNS--GLITVKSDVYSFGVVLLEIICCRSNF  614 (702)
Q Consensus       551 ~~kl~Dfg~a~~~~~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltG~~Pf  614 (702)
                      .+||+|||+++.........      .....||+.|+|||++..  ..|+...|+|+..+-..+.+.++.+|
T Consensus       467 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          467 DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            99999999999875432211      235679999999999876  56888899999999998888777766

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.71  E-value=2.5e-17  Score=143.91  Aligned_cols=105  Identities=18%  Similarity=0.174  Sum_probs=86.1

Q ss_pred             ccccccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEE
Q 038002           25 QLKSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILK  104 (702)
Q Consensus        25 ~~~~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~  104 (702)
                      +++++|.+||.|..+  ++|+|  |.|.|-|+.+||   |.+ |..    ++||.+|+...  +..+.|+|+.||||||+
T Consensus         4 ~~~dtL~~gq~L~~g--~~L~s--g~~~L~~q~dGn---Lvl-~~~----~~vW~snt~~~--~~~~~l~l~~dGNLvl~   69 (110)
T 3r0e_B            4 FTNNLLFSGQVLYGD--GRLTA--KNHQLVMQGDCN---LVL-YGG----KYGWQSNTHGN--GEHCFLRLNHKGELIIK   69 (110)
T ss_dssp             CBTTEEETTCEEETT--EEEEC--SSCEEEECTTSC---EEE-ECS----SSCEECCCTTS--SSSCEEEECTTSCEEEE
T ss_pred             cccCEECCCCEecCC--CEEEe--CCEEEEEcCCCe---EEE-ECC----eEEEECCCcCC--CcCEEEEEeCCCcEEEE
Confidence            567999999999977  78998  459998877776   333 443    48999999753  45679999999999999


Q ss_pred             cCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeee
Q 038002          105 TEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWES  146 (702)
Q Consensus       105 ~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqS  146 (702)
                      |.++.++|+|++....+.++|+|+||||||||+   ..||+|
T Consensus        70 d~~~~~iW~S~t~~~~~~~~~~L~~dGNlvly~---~~~W~t  108 (110)
T 3r0e_B           70 DDDFKTIWSSRSSSKQGEYVLILQDDGFGVIYG---PAIFET  108 (110)
T ss_dssp             CTTCCEEEECCCCCSSSCCEEEECTTSCEEEEC---SEEEES
T ss_pred             eCCCCEEEEcCCcCCCCCEEEEEcCCccEEEec---CCEecC
Confidence            998999999987544455789999999999997   489997

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.69  E-value=6.4e-17  Score=142.24  Aligned_cols=94  Identities=27%  Similarity=0.439  Sum_probs=78.1

Q ss_pred             CCCceEEEccCCcEEEEcCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCccCCCCeEE
Q 038002           88 PSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLL  167 (702)
Q Consensus        88 ~~~~~l~~~~~g~L~l~~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~L~  167 (702)
                      +...+|.|+.||||+|++. ++++|++++.......+|+|+++|||||++ ++.++||||+                   
T Consensus        18 ~~~~~L~~~~dgnlvl~~~-~~~vW~sn~~~~~~~~~l~l~~~GNLvl~d-~~~~~W~S~~-------------------   76 (112)
T 1xd5_A           18 EGGYLFIIQNDCNLVLYDN-NRAVWASGTNGKASGCVLKMQNDGNLVIYS-GSRAIWASNT-------------------   76 (112)
T ss_dssp             ETTEEEEECTTSCEEEEET-TEEEEECCCTTSCSSEEEEECTTSCEEEEE-TTEEEEECCC-------------------
T ss_pred             CCCEEEEEcCCCcEEEEEC-CEEEEeCCCcCCCCCEEEEEeCCCCEEEEc-CCEEEEECCc-------------------
Confidence            4567899999999999987 789999987533345789999999999999 7889999994                   


Q ss_pred             eeccCCCCcccceEeeeccCCceeeeeccccccccceeecCCcccc
Q 038002          168 SSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTDIQ  213 (702)
Q Consensus       168 S~~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~~~~  213 (702)
                            +|++|.|++.|+++|++++|..     ...+||+++++++
T Consensus        77 ------~~~~g~~~l~l~~dGnlvl~~~-----~~~~~W~S~~~~g  111 (112)
T 1xd5_A           77 ------NRQNGNYYLILQRDRNVVIYDN-----SNNAIWATHTNVG  111 (112)
T ss_dssp             ------CCSCCCCEEEECTTSCEEEECT-----TSCEEEECCCCCC
T ss_pred             ------cCCCCCEEEEEeCCCcEEEECC-----CCceEEECCCccC
Confidence                  4467899999999999888731     2468999998854

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.69  E-value=2.2e-16  Score=138.72  Aligned_cols=107  Identities=11%  Similarity=0.207  Sum_probs=87.6

Q ss_pred             cccccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEc
Q 038002           26 LKSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKT  105 (702)
Q Consensus        26 ~~~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~  105 (702)
                      ..++|.+||.|.++  +.|.  +|.|.|-|+.+||   |.++..  ...++||.+|+..+  +.++.|+|+.||||||+|
T Consensus         5 ~~~tL~~gq~L~~g--~~L~--~g~~~L~~q~dGN---LvL~~~--~~~~~vWssnt~~~--~~~~~l~l~~dGNLVl~d   73 (113)
T 3mez_B            5 VRNVLFSSQVMYDN--AQLA--TRDYSLVMRDDCN---LVLTKG--SKTNIVWESGTSGR--GQHCFMRLGHSGELDITD   73 (113)
T ss_dssp             CSSEEETTCEEETT--CEEE--ETTEEEEECTTSC---EEEEET--TTTEEEEECCCTTS--CSSCEEEECTTSCEEEEC
T ss_pred             cCCEeCCCCEECCC--CEeE--cCCEEEEEcCCCE---EEEEEC--CCCEEEEECCcccC--CcCEEEEEeCCCcEEEEC
Confidence            45899999999987  7786  4889999988886   333322  13689999999864  456899999999999999


Q ss_pred             CCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeee
Q 038002          106 EESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWES  146 (702)
Q Consensus       106 ~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqS  146 (702)
                      .++.++|+|++....+.++|+|+||||||||+   ..||+|
T Consensus        74 ~~~~~iW~S~t~~~~~~~~~~L~~dGnlvly~---~~~W~s  111 (113)
T 3mez_B           74 DRLNTVFVSNTVGQEGDYVLILQINGQAVVYG---PAVWST  111 (113)
T ss_dssp             TTSCEEEECSCCCSSSCCEEEECTTSCEEEEC---SEEEES
T ss_pred             CCCCEEEECCCcCCCCCEEEEEcCCceEEEec---CCEecC
Confidence            98899999987544455789999999999997   689998

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.68  E-value=1.4e-16  Score=139.39  Aligned_cols=90  Identities=22%  Similarity=0.412  Sum_probs=75.9

Q ss_pred             CCCceEEEccCCcEEEEcCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCccCCCCeEE
Q 038002           88 PSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLL  167 (702)
Q Consensus        88 ~~~~~l~~~~~g~L~l~~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~L~  167 (702)
                      +...+|.|+.||||||++ .+++||++++......++++|+++|||||++.++.++||||.                   
T Consensus        19 ~~~~~l~~~~dGnlvl~~-~~~~vW~sn~~~~~~~~~l~l~~dGNLVl~~~~~~~~W~S~t-------------------   78 (110)
T 3a0c_A           19 GPSYRLIMQGDCNFVLYD-SGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQSNRVIWQTKT-------------------   78 (110)
T ss_dssp             TTTEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECCC-------------------
T ss_pred             CCCEEEEEcCCCcEEEEE-CCEEEEECCCCCCCCcEEEEEeCCCCEEEECCCCcEEEecCC-------------------
Confidence            446789999999999998 578999998753344578999999999999988899999993                   


Q ss_pred             eeccCCCCcccceEeeeccCCceeeeeccccccccceeecCCcc
Q 038002          168 SSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTD  211 (702)
Q Consensus       168 S~~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~~  211 (702)
                            ++++|.|+++|+++|++++|.       . +||++++.
T Consensus        79 ------~~~~g~~~l~l~~dGnlvl~~-------~-~~W~S~~~  108 (110)
T 3a0c_A           79 ------NGKEDHYVLVLQQDRNVVIYG-------P-VVWATGSG  108 (110)
T ss_dssp             ------CCSSSCCEEEECTTSCEEEEC-------S-EEEECSCC
T ss_pred             ------CCCCCCEEEEEeCCccEEEEC-------C-CEecCCCc
Confidence                  456799999999999988872       1 69999865

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.66  E-value=1.9e-16  Score=138.05  Aligned_cols=108  Identities=16%  Similarity=0.200  Sum_probs=87.3

Q ss_pred             cccccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEc
Q 038002           26 LKSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKT  105 (702)
Q Consensus        26 ~~~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~  105 (702)
                      +.++|.+||.|.++  +.|  .+|.|.|.|+.+||.-.    |..      +|.+|+..+  +.++.|+|+.||||||+|
T Consensus         2 ~~dtL~~gq~L~~g--~~L--~~g~~~L~~q~dGNLvl----~~~------~Wssnt~~~--~~~~~l~l~~dGnLvl~d   65 (109)
T 3r0e_A            2 GTNYLLSGQTLDTE--GHL--KNGDFDLVMQDDCNLVL----YNG------NWQSNTANN--GRDCKLTLTDYGELVIKN   65 (109)
T ss_dssp             CCSEEETTCEECTT--CEE--EETTEEEEECTTSCEEE----ETT------TEECCCTTS--CSSCEEEECTTSCEEEEC
T ss_pred             ccCCcCCCCCcCCC--CEe--ECCCEEEEEecCCeEEE----EeC------eEEcCCCCC--CCcEEEEEcCCCeEEEEe
Confidence            56999999999877  677  57999999988887522    221      699998754  457899999999999999


Q ss_pred             CCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCcccccCC
Q 038002          106 EESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGG  157 (702)
Q Consensus       106 ~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpg  157 (702)
                      .++.++|++++.......+|+|+||||||||+   ..+|+|     .|.+||
T Consensus        66 ~~~~~vWss~t~~~~~~~~~~L~~dGNlvly~---~~~W~s-----~t~~~~  109 (109)
T 3r0e_A           66 GDGSTVWKSGAQSVKGNYAAVVHPDGRLVVFG---PSVFKI-----DPWVRG  109 (109)
T ss_dssp             TTSCEEEECCCCCSSSCCEEEEETTTEEEEEC---SEEEEE-----CTTSCC
T ss_pred             CCCCEEEcCCCcCCCcCEEEEEcCCCeEEEEe---cCEECC-----CCccCC
Confidence            98899999887544456789999999999997   689998     555554

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.64  E-value=5.6e-16  Score=137.29  Aligned_cols=89  Identities=22%  Similarity=0.328  Sum_probs=75.2

Q ss_pred             CCceEEEccCCcEEEEcCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCccCCCCeEEe
Q 038002           89 SNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLS  168 (702)
Q Consensus        89 ~~~~l~~~~~g~L~l~~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~L~S  168 (702)
                      ...+|.|+.||||+|++. +++||++++........|+|+|+|||||++.++.++||||                     
T Consensus        30 g~~~L~~~~dgnlvly~~-~~~vW~sn~~~~~~~~~l~l~~dGNLVl~d~~~~~lW~S~---------------------   87 (119)
T 1b2p_A           30 HVYRFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSP---------------------   87 (119)
T ss_dssp             EEEEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECS---------------------
T ss_pred             CCEEEEEecCCCEEEEEC-CEEEEeCCCccCCCceEEEEccCCEEEEEeCCCcEEEcCC---------------------
Confidence            356899999999999987 7899999875334457899999999999998899999999                     


Q ss_pred             eccCCCCcccceEeeeccCCceeeeeccccccccceeecCCcc
Q 038002          169 SVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTD  211 (702)
Q Consensus       169 ~~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~~  211 (702)
                          ++|++|.|+++|+++|+++++.        .+||++|+.
T Consensus        88 ----~~~~~g~~~l~l~~~Gnlvl~~--------~~~W~Sg~~  118 (119)
T 1b2p_A           88 ----VAGKAGHYVLVLQPDRNVVIYG--------DALWATQTV  118 (119)
T ss_dssp             ----CCCCSSCEEEEECTTSCEEEEE--------SEEEECCCC
T ss_pred             ----CCCCCCCEEEEEECCCcEEEEC--------ccEeCCCCC
Confidence                3457899999999999988873        279999863

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.62  E-value=1.6e-15  Score=133.95  Aligned_cols=91  Identities=21%  Similarity=0.396  Sum_probs=76.5

Q ss_pred             CCceEEEccCCcEEEEcCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCccCCCCeEEe
Q 038002           89 SNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLS  168 (702)
Q Consensus        89 ~~~~l~~~~~g~L~l~~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~L~S  168 (702)
                      ....|.|+.||||+|++ .++++|++++......+.++|+++|||||++.++.++|||||+|                  
T Consensus        20 g~~~L~~~~dgnlvly~-~~~~vW~sn~~~~~~~~~l~l~~~GnLvl~d~~~~~vW~S~~~~------------------   80 (115)
T 2dpf_A           20 GAYTLTIQNKCNLVKYQ-NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWGSACWG------------------   80 (115)
T ss_dssp             TTEEEEECTTSCEEEEE-TTEEEEECSCTTSCSSCEEEECTTSCEEEECTTCCEEEECCCCC------------------
T ss_pred             CCEEEEEcCCCcEEEEe-CCEEEEeCCCCCCCCceEEEECCCCcEEEECCCceEEEEcCCCC------------------
Confidence            35689999999999998 57899999875333457899999999999998888999999983                  


Q ss_pred             eccCCCCcccceEeeeccCCceeeeeccccccccceeecCCcccc
Q 038002          169 SVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTDIQ  213 (702)
Q Consensus       169 ~~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~~~~  213 (702)
                             ++|.|++.|+++|++++|.      .  .||++++|..
T Consensus        81 -------~~g~~~l~l~~dGnlvl~~------~--~~W~S~~~~~  110 (115)
T 2dpf_A           81 -------DNGKYALVLQKDGRFVIYG------P--VLWSLGPNGC  110 (115)
T ss_dssp             -------SSSCCEEEECTTSCEEEEC------S--EEECSSTTCB
T ss_pred             -------CCCCEEEEEeCCCeEEEEC------C--CEEECCCCCC
Confidence                   5688999999999988872      1  6999999844

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.56  E-value=9.2e-16  Score=158.37  Aligned_cols=114  Identities=11%  Similarity=-0.036  Sum_probs=89.0

Q ss_pred             ccceEEEeEE--EEEeeee-hhhhHhheeeE------------------------------------------EEEEecC
Q 038002          447 DKRKLLTVLA--GCLGSIT-FLCFLIAISSL------------------------------------------LVYKHRS  481 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~-~~~~avki~~l------------------------------------------~~~~~~~  481 (702)
                      ..+.||+|.+  ||++... ...||+|+.+.                                          ...+ +.
T Consensus        94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~v~~~~-~~  172 (282)
T 1zar_A           94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY-AW  172 (282)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE-EE
T ss_pred             ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCCcCeEE-ec
Confidence            3477888876  8888763 26778776532                                          2222 23


Q ss_pred             CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          482 SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       482 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      +..++||||++|++|.+ +..       .+...++.|++.||+|||++   ||+||||||+|||++ ++.+||+|||++.
T Consensus       173 ~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DFG~a~  240 (282)
T 1zar_A          173 EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDFPQSV  240 (282)
T ss_dssp             ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCCTTCE
T ss_pred             cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEECCCCe
Confidence            56799999999999998 522       23457999999999999999   999999999999999 9999999999987


Q ss_pred             ecCCCCCceeeceeccccccCccccc
Q 038002          562 LLMPNQTGIVAGVRGSRGYMAPEWQN  587 (702)
Q Consensus       562 ~~~~~~~~~~~~~~gt~~y~aPE~~~  587 (702)
                      .              +..+.|||++.
T Consensus       241 ~--------------~~~~~a~e~l~  252 (282)
T 1zar_A          241 E--------------VGEEGWREILE  252 (282)
T ss_dssp             E--------------TTSTTHHHHHH
T ss_pred             E--------------CCCCCHHHHHH
Confidence            4              34578888764

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.54  E-value=2e-14  Score=125.62  Aligned_cols=103  Identities=14%  Similarity=0.127  Sum_probs=82.4

Q ss_pred             ccccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEcC
Q 038002           27 KSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTE  106 (702)
Q Consensus        27 ~~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~~  106 (702)
                      +++|.+||.|.++  +.|  .+|.|.|.|+.+||.-.    |..   .. ||.+|+..+  +..+.|+|+.||||||+|.
T Consensus         2 ~~~l~~gq~L~~g--~~L--~~g~~~L~~q~dGnLvl----~~~---~~-vW~snt~~~--~~~~~l~l~~dGNLVl~~~   67 (111)
T 3mez_A            2 NNVLLTGDVIHTD--NQL--SYESAAFVMQGDCNLVL----YNE---AG-GFQSNTHGR--GVDCTLRLNNRGQLEIHSA   67 (111)
T ss_dssp             TTEEETTCEECTT--CEE--EETTEEEEECTTSCEEE----ECS---SC-CEECCCTTS--CSSCEEEECTTSCEEEECS
T ss_pred             cCEeCCCCEeCCC--CEE--ecCCEEEEEccCCeEEE----ECC---CC-EEECCcccC--CcCEEEEEcCCCcEEEEeC
Confidence            4789999999887  677  47899999988887522    332   23 999998765  4568999999999999998


Q ss_pred             CCC-eeeeeccc--cCCcceeEEEecCcCEEEeecCCceEeee
Q 038002          107 ESK-EKPIADLV--FDEPASFASMLDSGNFVLYSNRSGIIWES  146 (702)
Q Consensus       107 ~~~-~~w~~~~~--~~~~~~~~~l~d~Gnlvl~~~~~~~~WqS  146 (702)
                      ++. ++|+|++.  ......+++|++|||||||+   ..+|+|
T Consensus        68 ~~~~~vW~S~t~~~~~~~~~~l~Lq~dGNlvly~---~~~W~s  107 (111)
T 3mez_A           68 NSNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYG---PAIWST  107 (111)
T ss_dssp             SCSSCSEEESSSCCCCSSCCEEEECTTSCEEEEC---SEEEEC
T ss_pred             CCCEEEEEeccccCCCCcCEEEEECCCCeEEEec---cCEEcc
Confidence            876 59998853  22356789999999999997   689998

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.47  E-value=1.3e-13  Score=120.98  Aligned_cols=94  Identities=19%  Similarity=0.288  Sum_probs=74.4

Q ss_pred             CCCCCCCceEEEccCCcEEEEcC-CCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCccCC
Q 038002           84 EQPMPSNATLALTMDGKLILKTE-ESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLEN  162 (702)
Q Consensus        84 ~~~~~~~~~l~~~~~g~L~l~~~-~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~l~~  162 (702)
                      .|+.+...+|.|+.||||||++. .+.++|++++........++|+++|||||++.++.++|||=.+             
T Consensus        19 ~~L~~g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~iW~S~t~-------------   85 (113)
T 3mez_B           19 AQLATRDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNTVFVSNTV-------------   85 (113)
T ss_dssp             CEEEETTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCEEEECSCC-------------
T ss_pred             CEeEcCCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCEEEECCCc-------------
Confidence            34445567999999999999988 4789999987533346789999999999999888899998211             


Q ss_pred             CCeEEeeccCCCCcccceEeeeccCCceeeeeccccccccceeecCCc
Q 038002          163 GEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGT  210 (702)
Q Consensus       163 ~~~L~S~~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~  210 (702)
                                  ...|.|.+.|+.||++++|.        .+.|++++
T Consensus        86 ------------~~~~~~~~~L~~dGnlvly~--------~~~W~s~~  113 (113)
T 3mez_B           86 ------------GQEGDYVLILQINGQAVVYG--------PAVWSTAA  113 (113)
T ss_dssp             ------------CSSSCCEEEECTTSCEEEEC--------SEEEESCC
T ss_pred             ------------CCCCCEEEEEcCCceEEEec--------CCEecCCC
Confidence                        01356899999999999982        36798874

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.44  E-value=2.4e-13  Score=118.79  Aligned_cols=91  Identities=16%  Similarity=0.271  Sum_probs=72.3

Q ss_pred             CCCceEEEccCCcEEEEcCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCc-eEeeecCCCcccccCCCccCCCCeE
Q 038002           88 PSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSG-IIWESFSTPTDTILGGQSLENGEHL  166 (702)
Q Consensus        88 ~~~~~l~~~~~g~L~l~~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~-~~WqSFd~PTDTlLpgq~l~~~~~L  166 (702)
                      .....|.|+.||||||++.++  +|++++........++|+++|||||++.++. ++|||.-+                 
T Consensus        19 ~g~~~L~~q~dGnLvl~~~~~--vW~snt~~~~~~~~l~l~~dGNLVl~~~~~~~~vW~S~t~-----------------   79 (111)
T 3mez_A           19 YESAAFVMQGDCNLVLYNEAG--GFQSNTHGRGVDCTLRLNNRGQLEIHSANSNTPVWVYPRS-----------------   79 (111)
T ss_dssp             ETTEEEEECTTSCEEEECSSC--CEECCCTTSCSSCEEEECTTSCEEEECSSCSSCSEEESSS-----------------
T ss_pred             cCCEEEEEccCCeEEEECCCC--EEECCcccCCcCEEEEEcCCCcEEEEeCCCCEEEEEeccc-----------------
Confidence            456789999999999998776  9999875333457999999999999998765 59999521                 


Q ss_pred             EeeccCCCCcccceEeeeccCCceeeeeccccccccceeecCCcc
Q 038002          167 LSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTD  211 (702)
Q Consensus       167 ~S~~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~~  211 (702)
                            .....|.|.+.|+.||++++|.        .++|++++.
T Consensus        80 ------~~~~~~~~~l~Lq~dGNlvly~--------~~~W~s~t~  110 (111)
T 3mez_A           80 ------VNTVRGNYAATLGPDQHVTIYG--------PAIWSTPAA  110 (111)
T ss_dssp             ------CCCCSSCCEEEECTTSCEEEEC--------SEEEECCCC
T ss_pred             ------cCCCCcCEEEEECCCCeEEEec--------cCEEccCCC
Confidence                  1123578999999999999983        478998863

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.36  E-value=2.4e-12  Score=112.15  Aligned_cols=89  Identities=29%  Similarity=0.432  Sum_probs=71.5

Q ss_pred             CCceEEEccCCcEEEEcCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCccCCCCeEEe
Q 038002           89 SNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLS  168 (702)
Q Consensus        89 ~~~~l~~~~~g~L~l~~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~L~S  168 (702)
                      ....|.|+.||||+|++. +.++|++++........++|+++|||||++.++.++|||....                  
T Consensus        19 g~~~L~~q~dGnLvly~~-~~~vW~snt~~~~~~~~l~l~~dGNLvl~~~~~~~~W~S~t~~------------------   79 (109)
T 3dzw_A           19 GRYVFIMQEDCNLVLYDV-DKPIWATNTGGLDRRCHLSMQSDGNLVVYSPRNNPIWASNTGG------------------   79 (109)
T ss_dssp             TTEEEEECTTSCEEEEET-TEEEEECCCTTSSSSCEEEECTTSCEEEECTTSCEEEECCCCC------------------
T ss_pred             CCEEEEEcCCCcEEEEeC-CEEEEECCcccCCCCEEEEEeCCCCEEEECCCCCEEEECCCCC------------------
Confidence            357899999999999987 6899999875333457899999999999998888999984211                  


Q ss_pred             eccCCCCcccceEeeeccCCceeeeeccccccccceeecCCcc
Q 038002          169 SVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTD  211 (702)
Q Consensus       169 ~~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~~  211 (702)
                             ..+.|.+.|+.+|++++|.        .+.|++++.
T Consensus        80 -------~~~~~~~~L~ddGNlvly~--------~~~W~s~t~  107 (109)
T 3dzw_A           80 -------ENGNYVCVLQKDRNVVIYG--------TARWATGTN  107 (109)
T ss_dssp             -------SSSCEEEEECTTSCEEEEE--------SCCCCCCCC
T ss_pred             -------CCCCEEEEEeCCCEEEEEC--------CCEEeCCCc
Confidence                   2357899999999999983        257988864

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.35  E-value=2.7e-12  Score=111.94  Aligned_cols=87  Identities=23%  Similarity=0.339  Sum_probs=69.7

Q ss_pred             CCceEEEccCCcEEEEcCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCccCCCCeEEe
Q 038002           89 SNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLS  168 (702)
Q Consensus        89 ~~~~l~~~~~g~L~l~~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~L~S  168 (702)
                      ....|.|+.||||+|++.  .++|++++........++|+++|||||++.++.++|||-.+-                  
T Consensus        24 g~~~L~~q~dGnLvl~~~--~~vW~snt~~~~~~~~l~l~~dGNLvl~d~~~~~iW~S~t~~------------------   83 (110)
T 3r0e_B           24 KNHQLVMQGDCNLVLYGG--KYGWQSNTHGNGEHCFLRLNHKGELIIKDDDFKTIWSSRSSS------------------   83 (110)
T ss_dssp             SSCEEEECTTSCEEEECS--SSCEECCCTTSSSSCEEEECTTSCEEEECTTCCEEEECCCCC------------------
T ss_pred             CCEEEEEcCCCeEEEECC--eEEEECCCcCCCcCEEEEEeCCCcEEEEeCCCCEEEEcCCcC------------------
Confidence            357899999999999976  589999875433457899999999999998889999993210                  


Q ss_pred             eccCCCCcccceEeeeccCCceeeeeccccccccceeecCCc
Q 038002          169 SVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGT  210 (702)
Q Consensus       169 ~~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~  210 (702)
                             ..|.|.+.|+.||++++|.        .+.|++++
T Consensus        84 -------~~~~~~~~L~~dGNlvly~--------~~~W~t~~  110 (110)
T 3r0e_B           84 -------KQGEYVLILQDDGFGVIYG--------PAIFETSS  110 (110)
T ss_dssp             -------SSSCCEEEECTTSCEEEEC--------SEEEESCC
T ss_pred             -------CCCCEEEEEcCCccEEEec--------CCEecCCC
Confidence                   1356899999999999983        26798874

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=99.31  E-value=8.4e-12  Score=127.16  Aligned_cols=110  Identities=14%  Similarity=0.212  Sum_probs=84.0

Q ss_pred             ccccccCCCCc----cccCCCCeeEcCCCeEEEEEEe-----CCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEE
Q 038002           25 QLKSTISLGSS----LSPSGQHSWNSSSGLFQFGFYK-----QGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLAL   95 (702)
Q Consensus        25 ~~~~~l~~g~~----l~~~~~~~~~s~~g~f~lgF~~-----~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~   95 (702)
                      .++|||.||+.    |..+  +.|+|+ .+++-|+|.     .++ +++   |.+  ..+++|.+++..+  +. ..|.|
T Consensus       134 ~ptdtlLpg~~~~~~l~~g--~~L~S~-~dps~G~fsl~l~~dGn-lvL---y~~--~~~~yW~Sgt~~~--~~-~~l~l  201 (276)
T 3m7h_A          134 TPAIPLVPGAIDSLLLAPG--SELVQG-VVYGAGASKLVFQGDGN-LVA---YGP--NGAATWNAGTQGK--GA-VRAVF  201 (276)
T ss_dssp             CTTSCCCCSCTTCEEECSS--EEECTT-CEEEETTEEEEECTTSC-EEE---ECT--TSSEEEECCCTTT--TC-CEEEE
T ss_pred             ccccccccccccccccccC--cccccC-CCCCCceEEEeecCCce-EEE---EeC--CCeEEEECCCCCC--cc-EEEEE
Confidence            57899999999    7655  567654 355555544     443 333   332  3589999998865  33 78999


Q ss_pred             ccCCcEEEEcCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCC
Q 038002           96 TMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFST  149 (702)
Q Consensus        96 ~~~g~L~l~~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~  149 (702)
                      +.+|+|+++|.++..+|.+.+.. ....+|+|++|||||||+.  .++||||||
T Consensus       202 ~~dGnLvl~d~~~~~vWsS~t~~-~~~~rl~Ld~dGnLvly~~--~~~Wqsf~~  252 (276)
T 3m7h_A          202 QGDGNLVVYGAGNAVLWHSHTGG-HASAVLRLQANGSIAILDE--KPVWARFGF  252 (276)
T ss_dssp             CTTSCEEEECTTSCEEEECSCTT-CTTCEEEECTTSCEEEEEE--EEEEESSSC
T ss_pred             cCCCeEEEEeCCCcEEEEecCCC-CCCEEEEEcCCccEEEEcC--CCeEEccCc
Confidence            99999999998888999988753 3458999999999999976  689999997

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.27  E-value=1e-11  Score=108.08  Aligned_cols=87  Identities=16%  Similarity=0.279  Sum_probs=70.0

Q ss_pred             CCCceEEEccCCcEEEEcCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCccCCCCeEE
Q 038002           88 PSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLL  167 (702)
Q Consensus        88 ~~~~~l~~~~~g~L~l~~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~L~  167 (702)
                      +....|.|+.||||||+++    +|++++........++|+++|||||++.++.++|+|=     |              
T Consensus        20 ~g~~~L~~q~dGNLvl~~~----~Wssnt~~~~~~~~l~l~~dGnLvl~d~~~~~vWss~-----t--------------   76 (109)
T 3r0e_A           20 NGDFDLVMQDDCNLVLYNG----NWQSNTANNGRDCKLTLTDYGELVIKNGDGSTVWKSG-----A--------------   76 (109)
T ss_dssp             ETTEEEEECTTSCEEEETT----TEECCCTTSCSSCEEEECTTSCEEEECTTSCEEEECC-----C--------------
T ss_pred             CCCEEEEEecCCeEEEEeC----eEEcCCCCCCCcEEEEEcCCCeEEEEeCCCCEEEcCC-----C--------------
Confidence            4567899999999999974    7999875434467899999999999998888999871     1              


Q ss_pred             eeccCCCCcccceEeeeccCCceeeeeccccccccceeecCCcc
Q 038002          168 SSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTD  211 (702)
Q Consensus       168 S~~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~~  211 (702)
                            ....+.|.+.|+++|++++|.        .+.|+++++
T Consensus        77 ------~~~~~~~~~~L~~dGNlvly~--------~~~W~s~t~  106 (109)
T 3r0e_A           77 ------QSVKGNYAAVVHPDGRLVVFG--------PSVFKIDPW  106 (109)
T ss_dssp             ------CCSSSCCEEEEETTTEEEEEC--------SEEEEECTT
T ss_pred             ------cCCCcCEEEEEcCCCeEEEEe--------cCEECCCCc
Confidence                  012467899999999999983        467999887

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.22  E-value=6.8e-12  Score=127.56  Aligned_cols=72  Identities=28%  Similarity=0.337  Sum_probs=60.3

Q ss_pred             eeEEEEecCCC-C----CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhh-hcCCCCeEecCCCCCcEEEeCCCcEEEec
Q 038002          483 KKLLVYEFMSK-G----SLADLLFNLETRPLWRDRVRIALDVARGLLYLH-DECEVQIIHCDIKLRNILIDDSWRAKISD  556 (702)
Q Consensus       483 ~~~lV~e~~~~-g----sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~~~~ivH~dlkp~NIll~~~~~~kl~D  556 (702)
                      ..+|||||+.+ |    +|.++...    .++.++..++.|++.+|+||| +.   +|+||||||+|||++.  .++|+|
T Consensus       142 ~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlkp~NILl~~--~~~liD  212 (258)
T 1zth_A          142 KNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEA---ELVHADLSEYNIMYID--KVYFID  212 (258)
T ss_dssp             TTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCSTTSEEESS--SEEECC
T ss_pred             CCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEEcC--cEEEEE
Confidence            45899999942 3    77776543    234567889999999999999 88   9999999999999988  999999


Q ss_pred             ccceeec
Q 038002          557 FGLAKLL  563 (702)
Q Consensus       557 fg~a~~~  563 (702)
                      ||++...
T Consensus       213 FG~a~~~  219 (258)
T 1zth_A          213 MGQAVTL  219 (258)
T ss_dssp             CTTCEET
T ss_pred             CcccccC
Confidence            9999764

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=99.20  E-value=6.8e-11  Score=101.99  Aligned_cols=78  Identities=26%  Similarity=0.498  Sum_probs=63.9

Q ss_pred             CceEEEccCCcEEEEcCCCCeeeeecccc-CCcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCccCCCCeEEe
Q 038002           90 NATLALTMDGKLILKTEESKEKPIADLVF-DEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLS  168 (702)
Q Consensus        90 ~~~l~~~~~g~L~l~~~~~~~~w~~~~~~-~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~L~S  168 (702)
                      .-+|.|+.||||||++. +++||++++.. ....+.+.|+++|||||++.++.+||+|=.                    
T Consensus        20 ~y~l~~q~DgNLvly~~-~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~~~~~vWss~t--------------------   78 (105)
T 4h3o_A           20 PYHFIMQDDCNLVLYDH-STSTWASNTEIGGKSGCSAVLQSDGNFVVYDSSGRSLWASHS--------------------   78 (105)
T ss_dssp             TEEEEECTTSCEEEEET-TEEEEECCCCCTTCCSCEEEECTTSCEEEECTTCCEEEECCC--------------------
T ss_pred             CEEEEECCCCeEEEEEC-CEEEEEecCCCCCCccEEEEEeCCccEEEECCCcEEEEEecC--------------------
Confidence            35799999999999974 57899998753 234578999999999999999999999711                    


Q ss_pred             eccCCCCcccceEeeeccCCceeee
Q 038002          169 SVTETNSSTGRFCLNMQEDGNIVLY  193 (702)
Q Consensus       169 ~~s~~dps~G~fsl~l~~~g~~~~~  193 (702)
                           ....|.|.+.|+.+|++++|
T Consensus        79 -----~~~~~~~~l~L~ddGNlVly   98 (105)
T 4h3o_A           79 -----TRGSGNYILILQDDGNVIIY   98 (105)
T ss_dssp             -----CCCSSCEEEEECTTSCEEEE
T ss_pred             -----CCCCCCEEEEEeCCCeEEEE
Confidence                 11346789999999999998

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=99.19  E-value=6.3e-11  Score=118.47  Aligned_cols=88  Identities=22%  Similarity=0.357  Sum_probs=71.0

Q ss_pred             CCceEEEccCCcEEEEcCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCccCCCCeEEe
Q 038002           89 SNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLS  168 (702)
Q Consensus        89 ~~~~l~~~~~g~L~l~~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~L~S  168 (702)
                      ....|.|+.||||+|++. +++||.+++... ..+.++|+++|||||++.++.+||+|+++.                  
T Consensus        26 g~f~l~f~~~gnl~ly~~-~~~vW~an~~~~-~~~~l~l~~dGnLvl~d~~~~~vW~s~~~~------------------   85 (236)
T 1dlp_A           26 SSFRFTMQSDCNLVLFDS-DVRVWASNTAGA-TGCRAVLQSDGLLVILTAQNTIRWSSGTKG------------------   85 (236)
T ss_dssp             TTEEEEECTTSCEEEEES-SSEEECCCCCSC-SCCBCCBCSSSCBCCBCTTTCCSCCCCCCC------------------
T ss_pred             CCEEEEECCCCcEEEEEC-CEEEEECCCCCC-CCeEEEEcCCCcEEEEcCCCcEEEeCCccc------------------
Confidence            346788899999999985 689999887433 567899999999999999899999998751                  


Q ss_pred             eccCCCCcccceEeeeccCCceeeeeccccccccceeecCCcc
Q 038002          169 SVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTD  211 (702)
Q Consensus       169 ~~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~~  211 (702)
                             +.|.|.+.|+.+|+++++.        ..||++...
T Consensus        86 -------~~~~~~~~l~d~Gnlvl~~--------~~~W~S~~~  113 (236)
T 1dlp_A           86 -------SIGNYVLVLQPDRTVTIYG--------PGLWDSGTS  113 (236)
T ss_dssp             -------CSSCCEEEECSSSCEEEEC--------SEEEECSCC
T ss_pred             -------cCCcEEEEEeCCCCEEEec--------CCEEECCCC
Confidence                   2467899999999999872        157887654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.09  E-value=3.3e-11  Score=128.06  Aligned_cols=110  Identities=16%  Similarity=0.086  Sum_probs=81.5

Q ss_pred             ccccceEEEeEE--EEEeeeeh-hhhHhheeeEE-----------EEEec------------------------------
Q 038002          445 VNDKRKLLTVLA--GCLGSITF-LCFLIAISSLL-----------VYKHR------------------------------  480 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~-~~~avki~~l~-----------~~~~~------------------------------  480 (702)
                      +...+.||+|.+  ||++.... ..|||||.+..           .+...                              
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~  176 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP  176 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            445578899987  88887654 78888864421           00000                              


Q ss_pred             ------CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC----
Q 038002          481 ------SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW----  550 (702)
Q Consensus       481 ------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~----  550 (702)
                            ....+|||||++|++|.++...       .+...++.||+.+|.+||++   |||||||||.|||+++++    
T Consensus       177 vp~p~~~~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~~d  246 (397)
T 4gyi_A          177 VPEPIAQSRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDAED  246 (397)
T ss_dssp             CCCEEEEETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECSSC
T ss_pred             CCeeeeccCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCccc
Confidence                  1122699999999988765421       23456889999999999999   999999999999998776    


Q ss_pred             ------cEEEecccceeecC
Q 038002          551 ------RAKISDFGLAKLLM  564 (702)
Q Consensus       551 ------~~kl~Dfg~a~~~~  564 (702)
                            .+.|+||+-+....
T Consensus       247 ~~~~~~~~~iID~~Q~V~~~  266 (397)
T 4gyi_A          247 PSSITLTPIIIXFPQMVSMD  266 (397)
T ss_dssp             TTSEEEEEEECCCTTCEETT
T ss_pred             ccccccceEEEEeCCcccCC
Confidence                  38999999887643

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.27  E-value=1.1e-06  Score=88.71  Aligned_cols=87  Identities=15%  Similarity=0.117  Sum_probs=68.2

Q ss_pred             heeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcC-------------------
Q 038002          470 AISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC-------------------  530 (702)
Q Consensus       470 ki~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-------------------  530 (702)
                      .+.+++.+..+++..|+||||++|.+|.+.+..      ......++.+++++|+.||+..                   
T Consensus        71 ~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~  144 (263)
T 3tm0_A           71 PVPKVLHFERHDGWSNLLMSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDY  144 (263)
T ss_dssp             CCCCEEEEEEETTEEEEEEECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHH
T ss_pred             CCCeEEEEEecCCceEEEEEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHH
Confidence            356777778888999999999999999887421      1223467889999999999810                   


Q ss_pred             -------------------------------------CCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          531 -------------------------------------EVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       531 -------------------------------------~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                                                           ...++|+|++|.||+++++..+.|+||+.+..
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          145 LLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             HHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                                                 13699999999999998766667999987653

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.10  E-value=4.5e-06  Score=83.81  Aligned_cols=83  Identities=16%  Similarity=0.147  Sum_probs=62.8

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcC--------------------
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC--------------------  530 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--------------------  530 (702)
                      +.+++.+...++..++||||++|.+|.  ...    .+   ...++.++++.|+.||+..                    
T Consensus        77 vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~  147 (264)
T 1nd4_A           77 CAAVLDVVTEAGRDWLLLGEVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTR  147 (264)
T ss_dssp             BCCEEEEEECSSCEEEEEECCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHH
T ss_pred             CCeEEEeccCCCCCEEEEEecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHH
Confidence            466777777788899999999998884  211    11   2356778888888888742                    


Q ss_pred             -----------------------------------CCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          531 -----------------------------------EVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       531 -----------------------------------~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                                                         ...++|+|++|.||++++++.+.|+||+.+..
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          148 MEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             HHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                                               11399999999999998876677999998753

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.04  E-value=1.2e-06  Score=90.73  Aligned_cols=128  Identities=22%  Similarity=0.199  Sum_probs=84.6

Q ss_pred             eeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcC--------------------------------
Q 038002          483 KKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC--------------------------------  530 (702)
Q Consensus       483 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--------------------------------  530 (702)
                      ..|+|||+++|.+|.+....   .++..++..++.++++.|+.||+..                                
T Consensus        90 ~~~~vm~~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (304)
T 3sg8_A           90 MSFAGFTKIKGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELK  166 (304)
T ss_dssp             CSCEEEECCCCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSC
T ss_pred             cceEEEcccCCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCC
Confidence            45899999999888764331   4677778888888888888888610                                


Q ss_pred             -----------------------CCCeEecCCCCCcEEEeC--CCcEEEecccceeecCCCCCce--ee-----------
Q 038002          531 -----------------------EVQIIHCDIKLRNILIDD--SWRAKISDFGLAKLLMPNQTGI--VA-----------  572 (702)
Q Consensus       531 -----------------------~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~~--~~-----------  572 (702)
                                             ...++|+|++|.||++++  ...+.|+||+.+..-.....-.  ..           
T Consensus       167 ~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  246 (304)
T 3sg8_A          167 GPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVS  246 (304)
T ss_dssp             HHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHH
T ss_pred             cccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHH
Confidence                                   136899999999999998  5568899999887542211000  00           


Q ss_pred             ceeccccccC-cccccCCCCCccccccchhHhHHHhhhCCcCCc
Q 038002          573 GVRGSRGYMA-PEWQNSGLITVKSDVYSFGVVLLEIICCRSNFE  615 (702)
Q Consensus       573 ~~~gt~~y~a-PE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~  615 (702)
                      ......+... |+....  .....+.|+++.++|.+.+|..+|.
T Consensus       247 ~~l~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          247 KILNHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             HHHHHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             HHHHHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence            0000001111 221111  1123689999999999999998873

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.02  E-value=9.4e-06  Score=86.10  Aligned_cols=89  Identities=19%  Similarity=0.248  Sum_probs=70.3

Q ss_pred             eeeEEEEEecC---CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcC-----------------
Q 038002          471 ISSLLVYKHRS---SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC-----------------  530 (702)
Q Consensus       471 i~~l~~~~~~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----------------  530 (702)
                      +.+++.+..+.   +..|+||||++|..+.+..   ...++..++..++.++++.|+.||+..                 
T Consensus       100 vP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~  176 (359)
T 3dxp_A          100 VAKMYALCEDESVIGRAFYIMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQ  176 (359)
T ss_dssp             CCCEEEEECCTTTTSSCEEEEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHH
T ss_pred             CCcEEEECCCCCccCCeEEEEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchH
Confidence            56777777665   5589999999998875422   124678888899999999999999731                 


Q ss_pred             --------------------------------------CCCeEecCCCCCcEEEeCCCc--EEEecccceee
Q 038002          531 --------------------------------------EVQIIHCDIKLRNILIDDSWR--AKISDFGLAKL  562 (702)
Q Consensus       531 --------------------------------------~~~ivH~dlkp~NIll~~~~~--~kl~Dfg~a~~  562 (702)
                                                            ...++|+|++|.||+++.++.  +.|+||+.+..
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          177 RQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                                  247999999999999987753  68999998875

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.24  E-value=0.00075  Score=64.83  Aligned_cols=103  Identities=11%  Similarity=-0.007  Sum_probs=69.5

Q ss_pred             CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeec
Q 038002          494 GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG  573 (702)
Q Consensus       494 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  573 (702)
                      -||.++|...+..+++++++.++.|.+.+|.-+-.+.  .-..+=+.|..|++..+|.+...+ ..+.            
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------   97 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD------------   97 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc------------
Confidence            4899999988889999999999999999988762210  111333567999999999888764 1110            


Q ss_pred             eeccccccCcccccCCCCCccccccchhHhHHHhhhCCcC
Q 038002          574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSN  613 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~P  613 (702)
                       .....+.|||... ...+.+.-|||||+++|..+--..|
T Consensus        98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A           98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence             1123567888653 3456889999999999999854443

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.22  E-value=0.0004  Score=70.03  Aligned_cols=87  Identities=16%  Similarity=0.155  Sum_probs=65.9

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcC--------------------
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC--------------------  530 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--------------------  530 (702)
                      |.+++.+.++++..++|||+++|.++.+.....     ..+...+..++++.|+.||...                    
T Consensus        82 VP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~  156 (272)
T 4gkh_A           82 LPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSR  156 (272)
T ss_dssp             CCCEEEEEEETTEEEEEEECCCSEEHHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHH
T ss_pred             cCeEEEEEEECCeEEEEEEeeCCccccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHH
Confidence            577788888899999999999999888765432     1233456667777777777521                    


Q ss_pred             -----------------------------------CCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          531 -----------------------------------EVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       531 -----------------------------------~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                                                         ...++|+|+.+.||++++++.+-|+||+.+..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          157 MNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                                               11489999999999999887778999997764

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=96.89  E-value=0.0019  Score=66.50  Aligned_cols=89  Identities=19%  Similarity=0.159  Sum_probs=60.7

Q ss_pred             eeeEEEEE-ecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhc--------------------
Q 038002          471 ISSLLVYK-HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDE--------------------  529 (702)
Q Consensus       471 i~~l~~~~-~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--------------------  529 (702)
                      |.+.+.+. ...+..++|||+++|.+|.+....   .++..+...++.++.+.|+.||+.                    
T Consensus        74 VP~~~~~~~~~~g~~~~v~e~i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~  150 (306)
T 3tdw_A           74 IPQYVYIGKRSDGNPFVGYRKVQGQILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKIL  150 (306)
T ss_dssp             CCCEEEEEECTTSCEEEEEECCCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHH
T ss_pred             CCCeEeecccCCCceEEEEeccCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHH
Confidence            44555444 356678999999999888764221   234555555666666666655542                    


Q ss_pred             -------------------------------------CCCCeEecCCCCCcEEEeC---CCc-EEEecccceee
Q 038002          530 -------------------------------------CEVQIIHCDIKLRNILIDD---SWR-AKISDFGLAKL  562 (702)
Q Consensus       530 -------------------------------------~~~~ivH~dlkp~NIll~~---~~~-~kl~Dfg~a~~  562 (702)
                                                           ....++|+|++|.||+++.   ++. +.|+||+.+..
T Consensus       151 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          151 LLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                                                 1225799999999999987   455 48999998764

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=96.74  E-value=0.0023  Score=67.35  Aligned_cols=31  Identities=19%  Similarity=0.322  Sum_probs=26.5

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      ..++|+|++|.||+++++..+.|+||+.+..
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence            4899999999999999654578999998764

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=93.03  E-value=0.1  Score=53.85  Aligned_cols=30  Identities=17%  Similarity=0.207  Sum_probs=27.3

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      ..++|+|+++.||+++.++.+.|+||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            489999999999999888899999999765

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=92.47  E-value=0.24  Score=50.27  Aligned_cols=30  Identities=30%  Similarity=0.440  Sum_probs=25.7

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      ..++|+|+.|.||+ ..++.+.|+||..+..
T Consensus       173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          173 LAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             CEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             ceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            36999999999999 6667889999988764

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=92.21  E-value=0.24  Score=50.82  Aligned_cols=27  Identities=15%  Similarity=0.193  Sum_probs=23.8

Q ss_pred             CCCeEecCCCCCcEEEeCCCcEEEeccc
Q 038002          531 EVQIIHCDIKLRNILIDDSWRAKISDFG  558 (702)
Q Consensus       531 ~~~ivH~dlkp~NIll~~~~~~kl~Dfg  558 (702)
                      ...++|+|+.+.|++++.++ +.|+|+.
T Consensus       206 ~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          206 KPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             CCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             CceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            45899999999999999887 8899973

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=91.58  E-value=0.32  Score=51.52  Aligned_cols=29  Identities=24%  Similarity=0.374  Sum_probs=25.5

Q ss_pred             CeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          533 QIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       533 ~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      .++|||+.|.||+++.+ .++|+||..+..
T Consensus       228 ~L~HGDl~~~Nil~~~~-~~~lID~e~a~~  256 (397)
T 2olc_A          228 TLIHGDLHTGSIFASEH-ETKVIDPEFAFY  256 (397)
T ss_dssp             EEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             ceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence            89999999999999876 489999987764

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=90.57  E-value=0.24  Score=53.05  Aligned_cols=76  Identities=9%  Similarity=0.031  Sum_probs=46.0

Q ss_pred             CeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeecee--ccccccCcccccCC---CCCccccccchhHhHHHh
Q 038002          533 QIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR--GSRGYMAPEWQNSG---LITVKSDVYSFGVVLLEI  607 (702)
Q Consensus       533 ~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~el  607 (702)
                      .++|||++|.||+++.++ ++|+||+.+..-.....  .....  -...|.+|+.....   ......++.+....+|+.
T Consensus       233 ~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D--la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (420)
T 2pyw_A          233 ALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD--IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL  309 (420)
T ss_dssp             EEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH--HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred             eEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH--HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence            899999999999998876 99999998875321110  01111  01345666544311   111234455777777777


Q ss_pred             hhCC
Q 038002          608 ICCR  611 (702)
Q Consensus       608 ltG~  611 (702)
                      ..+.
T Consensus       310 y~~~  313 (420)
T 2pyw_A          310 FNKR  313 (420)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6653

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=86.53  E-value=0.39  Score=49.09  Aligned_cols=30  Identities=23%  Similarity=0.283  Sum_probs=26.1

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      .+++|+|+++.||+++++..+.|+||+.+.
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            389999999999999987666899998765

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=86.45  E-value=0.75  Score=47.25  Aligned_cols=31  Identities=32%  Similarity=0.395  Sum_probs=27.4

Q ss_pred             CCeEecCCCCCcEEEeCC----CcEEEecccceee
Q 038002          532 VQIIHCDIKLRNILIDDS----WRAKISDFGLAKL  562 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~----~~~kl~Dfg~a~~  562 (702)
                      ..++|||+.+.||+++.+    +.+.|+||+.+..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            389999999999999874    6899999998875

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=84.77  E-value=0.33  Score=51.69  Aligned_cols=30  Identities=23%  Similarity=0.360  Sum_probs=25.1

Q ss_pred             CeEecCCCCCcEEE------eCCCcEEEecccceee
Q 038002          533 QIIHCDIKLRNILI------DDSWRAKISDFGLAKL  562 (702)
Q Consensus       533 ~ivH~dlkp~NIll------~~~~~~kl~Dfg~a~~  562 (702)
                      .++|+|+.+.||++      +++..++++||..|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            46799999999999      4466799999988764

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=84.75  E-value=2.5  Score=40.48  Aligned_cols=74  Identities=11%  Similarity=0.101  Sum_probs=57.0

Q ss_pred             EEecCCeeEEEEecCCC-CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHH-hhhhcCCCCeEecCCCCCcEEEeCCCcEEE
Q 038002          477 YKHRSSKKLLVYEFMSK-GSLADLLFNLETRPLWRDRVRIALDVARGLL-YLHDECEVQIIHCDIKLRNILIDDSWRAKI  554 (702)
Q Consensus       477 ~~~~~~~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~-~LH~~~~~~ivH~dlkp~NIll~~~~~~kl  554 (702)
                      ...+++.+.+.++.-++ -++..+ +    ..+..++++++.+|+.... +++.+     +|--|+|+||+++.++.++|
T Consensus        56 I~~~eD~~~i~y~~~~~~~~f~~i-~----~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f~~~~~p~i  125 (219)
T 4ano_A           56 IDVSEDEVKVVIKPPSSFLTFAAI-R----KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMFNRALEPFF  125 (219)
T ss_dssp             EEECSSEEEEEEECCTTCEEHHHH-H----TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEECTTCCEEE
T ss_pred             EEEeCCEEEEEEEcCcccCcHHHH-H----hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEEeCCCcEEE
Confidence            34667888887877644 344433 2    5778999999999998888 67654     78899999999999999999


Q ss_pred             ecccce
Q 038002          555 SDFGLA  560 (702)
Q Consensus       555 ~Dfg~a  560 (702)
                      .-.|+-
T Consensus       126 ~hRGi~  131 (219)
T 4ano_A          126 LHVGVK  131 (219)
T ss_dssp             SCCEET
T ss_pred             EEcCCc
Confidence            876653

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=83.66  E-value=0.92  Score=46.34  Aligned_cols=29  Identities=28%  Similarity=0.245  Sum_probs=25.2

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      ..++|+|+++.||+++ + .+.|+||+.+..
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            3799999999999998 4 899999987653

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=81.45  E-value=1.3  Score=45.79  Aligned_cols=31  Identities=26%  Similarity=0.347  Sum_probs=27.6

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      ..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            4899999999999999888899999987654

>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*

Probab=80.11  E-value=0.82  Score=36.34  Aligned_cols=31  Identities=19%  Similarity=0.383  Sum_probs=26.7

Q ss_pred             CCHHhhhhhccCCceeeEEEec--CCceeeccc
Q 038002          375 VSKKDCSKSCLNDCYFGAAFYS--DGACSKHKF  405 (702)
Q Consensus       375 ~s~~~C~~~Cl~nCsC~a~~~~--~~~C~~~~~  405 (702)
                      .++++|+..|+.+=.|.||.|+  ...|+.+..
T Consensus        30 ~sl~~Cq~aC~a~~~C~aFTyN~~s~~CflKs~   62 (82)
T 2ll3_A           30 SSLSECRARCQAEKECSHYTYNVKSGLCYPKRG   62 (82)
T ss_dssp             SSHHHHHHHHHHCTTEEEEEEETTTTEEEEEES
T ss_pred             CCHHHHHHHhhccCCCCeEEeccCCCceEcccC
Confidence            4899999999999999999994  567988653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	702
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-44
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-39
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-37
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-37
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-36
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-36
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-36
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	6e-36
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-36
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-36
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-35
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-35
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-35
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-35
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-34
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-34
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-33
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-33
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-33
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-33
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-33
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-32
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-32
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-32
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-32
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-31
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-31
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-31
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	8e-30
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-29
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-29
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-28
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-26
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-26
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-26
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	8e-26
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-25
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-25
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-24
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-24
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	7e-24
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	8e-24
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-23
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-22
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-21
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-21
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-20
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-20
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-19
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-19
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-19
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-19
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-18
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-18
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-17
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-17
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	6e-17
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	9e-17
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	9e-16
d1dlpa2	120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	5e-14
d1dlpa2	120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	1e-11
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	7e-14
d1b2pa_	119	b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill	8e-14
d1b2pa_	119	b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill	6e-05
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-13
d1dlpa1	115	b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p	2e-12
d1dlpa1	115	b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p	2e-07
d1kj1a_	109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	3e-12
d1kj1a_	109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	8e-10
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-11
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	1e-10
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	7e-06
d1xd5a_	112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	2e-10
d1xd5a_	112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	2e-08
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-07

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (401), Expect = 2e-44
 Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 15/201 (7%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            +V ++    SL   L  +ET+      + IA   A+G+ YLH +    IIH D+K  NI
Sbjct: 79  AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI 135

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEW---QNSGLITVKSDVYSF 600
            + +    KI DFGLA +            + GS  +MAPE    Q+    + +SDVY+F
Sbjct: 136 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195

Query: 601 GVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGL 660
           G+VL E++  +  +  N++  D+++    V   +++ + +K+          + M +   
Sbjct: 196 GIVLYELMTGQLPYS-NINNRDQIIF--MVGRGYLSPDLSKVRSN-----CPKAMKRLMA 247

Query: 661 LCIQDEPNLRPSMKNVILMLE 681
            C++ + + RP    ++  +E
Sbjct: 248 ECLKKKRDERPLFPQILASIE 268

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (365), Expect = 1e-39
 Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 16/198 (8%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
            ++ E+M  GSL D L       L     + +A  +A G+ ++ +      IH D++  N
Sbjct: 83  YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAAN 139

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+ D+   KI+DFGLA+L+  N+     G +    + APE  N G  T+KSDV+SFG++
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199

Query: 604 LLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCI 663
           L EI+         ++  +            V     +           E + +   LC 
Sbjct: 200 LTEIVTHGRIPYPGMTNPE------------VIQNLERGYRMVRPDNCPEELYQLMRLCW 247

Query: 664 QDEPNLRPSMKNVILMLE 681
           ++ P  RP+   +  +LE
Sbjct: 248 KERPEDRPTFDYLRSVLE 265

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (351), Expect = 1e-37
 Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 15/215 (6%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           +  L       +   LV+EFM  G L+D L            + + LDV  G+ YL + C
Sbjct: 62  LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
              +IH D+  RN L+ ++   K+SDFG+ + ++ +Q     G +    + +PE  +   
Sbjct: 122 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 178

Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI 650
            + KSDV+SFGV++ E+         N S ++            V  + +        ++
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------------VVEDISTGFRLYKPRL 226

Query: 651 TLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME 685
               + +    C ++ P  RP+   ++  L    E
Sbjct: 227 ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (350), Expect = 3e-37
 Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 18/213 (8%)

Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQII 535
           +        L+V  +M  G L + + N    P  +D +   L VA+G+         + +
Sbjct: 96  ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM---KFLASKKFV 152

Query: 536 HCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIV---AGVRGSRGYMAPEWQNSGLIT 592
           H D+  RN ++D+ +  K++DFGLA+ +   +   V    G +    +MA E   +   T
Sbjct: 153 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT 212

Query: 593 VKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL 652
            KSDV+SFGV+L E++   +    +V+T D       +    + G           +   
Sbjct: 213 TKSDVWSFGVLLWELMTRGAPPYPDVNTFD-------ITVYLLQGR-----RLLQPEYCP 260

Query: 653 ERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME 685
           + + +  L C   +  +RPS   ++  +     
Sbjct: 261 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 293

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (344), Expect = 1e-36
 Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 16/198 (8%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
            +V E+MSKGSL D L     + L     V +A  +A G+ Y+        +H D++  N
Sbjct: 87  YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAAN 143

Query: 544 ILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           IL+ ++   K++DFGLA+L+  N+     G +    + APE    G  T+KSDV+SFG++
Sbjct: 144 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 203

Query: 604 LLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCI 663
           L E+          +   +            V  +  +           E +      C 
Sbjct: 204 LTELTTKGRVPYPGMVNRE------------VLDQVERGYRMPCPPECPESLHDLMCQCW 251

Query: 664 QDEPNLRPSMKNVILMLE 681
           + EP  RP+ + +   LE
Sbjct: 252 RKEPEERPTFEYLQAFLE 269

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  136 bits (344), Expect = 2e-36
 Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 19/221 (8%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           +  L     +S+  +++ EFM  GSL   L   + +      V +   +A G+ YL D  
Sbjct: 89  VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 148

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI----VAGVRGSRGYMAPEWQ 586
               +H D+  RNIL++ +   K+SDFGL++ L  + +        G +    + APE  
Sbjct: 149 ---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 205

Query: 587 NSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE 646
                T  SDV+S+G+V+ E++        +++  D       V N            + 
Sbjct: 206 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD-------VINAIEQDYRLPPPMDC 258

Query: 647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP 687
                   + +  L C Q + N RP    ++  L+  +  P
Sbjct: 259 P-----SALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP 294

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (338), Expect = 5e-36
 Identities = 40/211 (18%), Positives = 87/211 (41%), Gaps = 15/211 (7%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           +  L     +     ++ E+M+ G L + L  +  R   +  + +  DV   + YL  + 
Sbjct: 61  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 120

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
               +H D+  RN L++D    K+SDFGL++ ++ ++     G +    +  PE      
Sbjct: 121 ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK 177

Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI 650
            + KSD+++FGV++ EI           + ++             A    + +      +
Sbjct: 178 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------------TAEHIAQGLRLYRPHL 225

Query: 651 TLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
             E++      C  ++ + RP+ K ++  + 
Sbjct: 226 ASEKVYTIMYSCWHEKADERPTFKILLSNIL 256

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (338), Expect = 6e-36
 Identities = 52/207 (25%), Positives = 80/207 (38%), Gaps = 20/207 (9%)

Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQI 534
           V         +V E+M+KGSL D L +     L     ++ +LDV   + YL        
Sbjct: 68  VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---F 124

Query: 535 IHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVK 594
           +H D+  RN+L+ +   AK+SDFGL K     Q       +    + APE       + K
Sbjct: 125 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT----GKLPVKWTAPEALREKKFSTK 180

Query: 595 SDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLER 654
           SDV+SFG++L EI          +   D       V      G      + +        
Sbjct: 181 SDVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPRVEKGY-----KMDAPDGCPPA 228

Query: 655 MVKTGLLCIQDEPNLRPSMKNVILMLE 681
           + +    C   +  +RPS   +   LE
Sbjct: 229 VYEVMKNCWHLDAAMRPSFLQLREQLE 255

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (342), Expect = 6e-36
 Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 6/164 (3%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I       +   +  +  E M  GSL  +L     R   +   ++++ V +GL YL ++ 
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREKH 124

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             +I+H D+K  NIL++     K+ DFG++  L+ +      G   +R YM+PE      
Sbjct: 125 --KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSYMSPERLQGTH 179

Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF 634
            +V+SD++S G+ L+E+   R       +   E++    V    
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDA 223

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (340), Expect = 6e-36
 Identities = 48/218 (22%), Positives = 76/218 (34%), Gaps = 24/218 (11%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ-----IIHCDIK 540
           LV ++   GSL D L            +++AL  A GL +LH E         I H D+K
Sbjct: 78  LVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 135

Query: 541 LRNILIDDSWRAKISDFGLAKLLMPNQTGIVA---GVRGSRGYMAPEW------QNSGLI 591
            +NIL+  +    I+D GLA         I        G++ YMAPE             
Sbjct: 136 SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFES 195

Query: 592 TVKSDVYSFGVVLLEIICCRSNFEVNVSTAD---EVLLSTWVYNCFVAGEFNKLVEEEVD 648
             ++D+Y+ G+V  EI    S   ++        +++ S             + +   + 
Sbjct: 196 FKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIP 255

Query: 649 KIT-----LERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
                   L  M K    C       R +   +   L 
Sbjct: 256 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  134 bits (338), Expect = 1e-35
 Identities = 51/235 (21%), Positives = 86/235 (36%), Gaps = 39/235 (16%)

Query: 475 LVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPL-----------------------WRD 511
           L          L++E+M+ G L + L ++    +                         +
Sbjct: 82  LGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAE 141

Query: 512 RVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIV 571
           ++ IA  VA G+ YL    E + +H D+  RN L+ ++   KI+DFGL++ +        
Sbjct: 142 QLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA 198

Query: 572 AG-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWV 630
            G       +M PE       T +SDV+++GVVL EI          ++  +       V
Sbjct: 199 DGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE-------V 251

Query: 631 YNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME 685
                 G      E          +     LC    P  RPS  ++  +L+   E
Sbjct: 252 IYYVRDGNILACPENCP-----LELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (334), Expect = 2e-35
 Identities = 51/194 (26%), Positives = 82/194 (42%), Gaps = 18/194 (9%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           +LV E M+ G+L   L   +     +        + +GL +LH      IIH D+K  NI
Sbjct: 88  VLVTELMTSGTLKTYLKRFKVMK-IKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNI 145

Query: 545 LIDD-SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
            I   +   KI D GLA L   +       V G+  +MAPE           DVY+FG+ 
Sbjct: 146 FITGPTGSVKIGDLGLATLKRASFAK---AVIGTPEFMAPE-MYEEKYDESVDVYAFGMC 201

Query: 604 LLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCI 663
           +LE+      +       +   +   V +      F+K+   EV +I +E        CI
Sbjct: 202 MLEMATSEYPYS---ECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI-IEG-------CI 250

Query: 664 QDEPNLRPSMKNVI 677
           +   + R S+K+++
Sbjct: 251 RQNKDERYSIKDLL 264

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (335), Expect = 2e-35
 Identities = 44/204 (21%), Positives = 76/204 (37%), Gaps = 17/204 (8%)

Query: 480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDI 539
           ++   +LV E    G L   L          +   +   V+ G+ YL ++     +H D+
Sbjct: 79  QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDL 135

Query: 540 KLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA--GVRGSRGYMAPEWQNSGLITVKSDV 597
             RN+L+ +   AKISDFGL+K L  + +   A    +    + APE  N    + +SDV
Sbjct: 136 AARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 195

Query: 598 YSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVK 657
           +S+GV + E +         +   +       V      G+  +   E         +  
Sbjct: 196 WSYGVTMWEALSYGQKPYKKMKGPE-------VMAFIEQGKRMECPPE-----CPPELYA 243

Query: 658 TGLLCIQDEPNLRPSMKNVILMLE 681
               C   +   RP    V   + 
Sbjct: 244 LMSDCWIYKWEDRPDFLTVEQRMR 267

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (332), Expect = 4e-35
 Identities = 43/213 (20%), Positives = 83/213 (38%), Gaps = 20/213 (9%)

Query: 471 ISSLLVYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPL---WRDRVRIALDVARGLLYL 526
           +        R++  L +V E+   G LA ++               +R+   +   L   
Sbjct: 66  VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 125

Query: 527 HD--ECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE 584
           H   +    ++H D+K  N+ +D     K+ DFGLA++L  + +       G+  YM+PE
Sbjct: 126 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS-FAKAFVGTPYYMSPE 184

Query: 585 WQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE 644
             N      KSD++S G +L E+      F               +      G+F ++  
Sbjct: 185 QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--------LAGKIREGKFRRIPY 236

Query: 645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
              D+  L  ++      +  +   RPS++ ++
Sbjct: 237 RYSDE--LNEIIT---RMLNLKDYHRPSVEEIL 264

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  131 bits (330), Expect = 1e-34
 Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 16/212 (7%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDE 529
           +  LL    R     ++ EFM+ G+L D L     + +     + +A  ++  + YL  +
Sbjct: 75  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 134

Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSG 589
                IH D+  RN L+ ++   K++DFGL++L+  +     AG +    + APE     
Sbjct: 135 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 191

Query: 590 LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK 649
             ++KSDV++FGV+L EI     +    +  +        VY              E  +
Sbjct: 192 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYELLEKD-----YRMERPE 239

Query: 650 ITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
              E++ +    C Q  P+ RPS   +    E
Sbjct: 240 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (329), Expect = 1e-34
 Identities = 46/211 (21%), Positives = 87/211 (41%), Gaps = 17/211 (8%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCD 538
            +    +++ E+M  G+L   L   +        V +   +A G+ YL +      +H D
Sbjct: 79  SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRD 135

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQTGI--VAGVRGSRGYMAPEWQNSGLITVKSD 596
           +  RNIL++ +   K+SDFGL+++L  +       +G +    + APE  +    T  SD
Sbjct: 136 LAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASD 195

Query: 597 VYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMV 656
           V+SFG+V+ E++         +S  +            V    N              + 
Sbjct: 196 VWSFGIVMWEVMTYGERPYWELSNHE------------VMKAINDGFRLPTPMDCPSAIY 243

Query: 657 KTGLLCIQDEPNLRPSMKNVILMLEGTMEIP 687
           +  + C Q E   RP   +++ +L+  +  P
Sbjct: 244 QLMMQCWQQERARRPKFADIVSILDKLIRAP 274

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (321), Expect = 2e-33
 Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 18/201 (8%)

Query: 483 KKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR 542
             +LV E    G L   L         ++ + +   V+ G+ YL +      +H D+  R
Sbjct: 81  SWMLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAAR 136

Query: 543 NILIDDSWRAKISDFGLAKLLMPNQTGIVA--GVRGSRGYMAPEWQNSGLITVKSDVYSF 600
           N+L+     AKISDFGL+K L  ++    A    +    + APE  N    + KSDV+SF
Sbjct: 137 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 196

Query: 601 GVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGL 660
           GV++ E           +  ++       V      GE                M     
Sbjct: 197 GVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKGERMGCPAG-----CPREMYDLMN 244

Query: 661 LCIQDEPNLRPSMKNVILMLE 681
           LC   +   RP    V L L 
Sbjct: 245 LCWTYDVENRPGFAAVELRLR 265

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (320), Expect = 3e-33
 Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 32/230 (13%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPL---------------WRDRVRI 515
           I +LL          L  E+   G+L D L                        +  +  
Sbjct: 73  IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 132

Query: 516 ALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR 575
           A DVARG+ YL  +   Q IH D+  RNIL+ +++ AKI+DFGL++         +   R
Sbjct: 133 AADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM--GR 187

Query: 576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFV 635
               +MA E  N  + T  SDV+S+GV+L EI+         ++ A+       +Y    
Sbjct: 188 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-------LYEKLP 240

Query: 636 AGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME 685
            G        E      + +      C +++P  RPS   +++ L   +E
Sbjct: 241 QGY-----RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 285

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (318), Expect = 3e-33
 Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 17/208 (8%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           +     ++   + + L  E+ S G L D +   +      D  R    +  G++YLH   
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIG 123

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEW-QNS 588
              I H DIK  N+L+D+    KISDFGLA +   N    +   + G+  Y+APE  +  
Sbjct: 124 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180

Query: 589 GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD 648
                  DV+S G+VL  ++     ++    +      S W         + K+    + 
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWD--QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 238

Query: 649 KITLERMVKTGLLCIQDEPNLRPSMKNV 676
            +            + + P+ R ++ ++
Sbjct: 239 LLH---------KILVENPSARITIPDI 257

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (319), Expect = 5e-33
 Identities = 53/233 (22%), Positives = 90/233 (38%), Gaps = 32/233 (13%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPL-----------------WRDRV 513
           I +LL         L++ E+   G L + L       +                   D +
Sbjct: 89  IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148

Query: 514 RIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG 573
             +  VA+G+ +L  +     IH D+  RNIL+      KI DFGLA+ +  +   +V G
Sbjct: 149 SFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205

Query: 574 -VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYN 632
             R    +MAPE   + + T +SDV+S+G+ L E+    S+    +    +         
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK------ 259

Query: 633 CFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME 685
             +   F  L  E         M      C   +P  RP+ K ++ ++E  + 
Sbjct: 260 -MIKEGFRMLSPEHAP----AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (320), Expect = 5e-33
 Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 24/212 (11%)

Query: 481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIK 540
           +S   L+ + M  G L D +   +     +  +   + +A+G+ YL D    +++H D+ 
Sbjct: 82  TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLA 138

Query: 541 LRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVRGSRGYMAPEWQNSGLITVKSDVYS 599
            RN+L+      KI+DFGLAKLL   +    A G +    +MA E     + T +SDV+S
Sbjct: 139 ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWS 198

Query: 600 FGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE----EVDKITLERM 655
           +GV + E++   S                  Y+   A E + ++E+        I    +
Sbjct: 199 YGVTVWELMTFGSKP----------------YDGIPASEISSILEKGERLPQPPICTIDV 242

Query: 656 VKTGLLCIQDEPNLRPSMKNVILMLEGTMEIP 687
               + C   + + RP  + +I+        P
Sbjct: 243 YMIMVKCWMIDADSRPKFRELIIEFSKMARDP 274

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (316), Expect = 2e-32
 Identities = 56/234 (23%), Positives = 90/234 (38%), Gaps = 37/234 (15%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPL---------------------- 508
           I +LL     S    L++E+   G L + L +   +                        
Sbjct: 103 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 162

Query: 509 WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT 568
           + D +  A  VA+G+ +L  +     +H D+  RN+L+      KI DFGLA+ +M +  
Sbjct: 163 FEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 219

Query: 569 GIVAG-VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLS 627
            +V G  R    +MAPE    G+ T+KSDV+S+G++L EI     N    +         
Sbjct: 220 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYK- 278

Query: 628 TWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
             +       +      EE+  I           C   +   RPS  N+   L 
Sbjct: 279 --LIQNGFKMDQPFYATEEIYII--------MQSCWAFDSRKRPSFPNLTSFLG 322

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (311), Expect = 2e-32
 Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 25/209 (11%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L  Y H +++  L+ E+   G++   L    ++   +       ++A  L Y H + 
Sbjct: 68  ILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSK- 125

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             ++IH DIK  N+L+  +   KI+DFG +     ++   +    G+  Y+ PE     +
Sbjct: 126 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---GTLDYLPPEMIEGRM 180

Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVN--VSTADEVLLSTWVYNCFVAGEFNKLVEEEVD 648
              K D++S GV+  E +  +  FE N    T   +    + +  FV      L+     
Sbjct: 181 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR--- 237

Query: 649 KITLERMVKTGLLCIQDEPNLRPSMKNVI 677
                         ++  P+ RP ++ V+
Sbjct: 238 -------------LLKHNPSQRPMLREVL 253

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  124 bits (313), Expect = 4e-32
 Identities = 44/210 (20%), Positives = 76/210 (36%), Gaps = 24/210 (11%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
                    R     LV E+    +   L  + +      +   +     +GL YLH   
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQ-EVEIAAVTHGALQGLAYLHSH- 134

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW---QN 587
              +IH D+K  NIL+ +    K+ DFG A ++ P  +       G+  +MAPE     +
Sbjct: 135 --NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS-----FVGTPYWMAPEVILAMD 187

Query: 588 SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV 647
            G    K DV+S G+  +E+   +       +      L     N   A +     E   
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPPLF---NMNAMSALYHIAQNESPALQSGHWSEYFR 244

Query: 648 DKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
           + +           C+Q  P  RP+ + ++
Sbjct: 245 NFV---------DSCLQKIPQDRPTSEVLL 265

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (310), Expect = 6e-32
 Identities = 40/212 (18%), Positives = 74/212 (34%), Gaps = 20/212 (9%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  LL   +  +   ++ EF + G++  ++  LE          +       L YLH   
Sbjct: 71  IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH--- 127

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW----- 585
           + +IIH D+K  NIL       K++DFG++               G+  +MAPE      
Sbjct: 128 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ-RRDSFIGTPYWMAPEVVMCET 186

Query: 586 QNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE 645
                   K+DV+S G+ L+E+                 +L     +             
Sbjct: 187 SKDRPYDYKADVWSLGITLIEMAEIEPPHH---ELNPMRVLLKIAKSEPPTLAQPSRWSS 243

Query: 646 EVDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
                 L++       C++   + R +   ++
Sbjct: 244 NFKDF-LKK-------CLEKNVDARWTTSQLL 267

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (307), Expect = 1e-31
 Identities = 46/198 (23%), Positives = 74/198 (37%), Gaps = 16/198 (8%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E    GSL D L   +   L     R A+ VA G+ YL  +     IH D+  RN+L
Sbjct: 87  MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLL 143

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVA--GVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           +      KI DFGL + L  N    V     +    + APE   +   +  SD + FGV 
Sbjct: 144 LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203

Query: 604 LLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCI 663
           L E+        + ++ +        + +            E+      + +    + C 
Sbjct: 204 LWEMFTYGQEPWIGLNGSQ-------ILHKIDKEGERLPRPEDCP----QDIYNVMVQCW 252

Query: 664 QDEPNLRPSMKNVILMLE 681
             +P  RP+   +   L 
Sbjct: 253 AHKPEDRPTFVALRDFLL 270

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 1e-31
 Identities = 44/201 (21%), Positives = 73/201 (36%), Gaps = 15/201 (7%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
            ++ E  + G L   L   +        +  A  ++  L YL  +     +H DI  RN+
Sbjct: 83  WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNV 139

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVL 604
           L+  +   K+ DFGL++ +  +     +  +    +MAPE  N    T  SDV+ FGV +
Sbjct: 140 LVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 199

Query: 605 LEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQ 664
            EI+         V   D       V      GE   +            +      C  
Sbjct: 200 WEILMHGVKPFQGVKNND-------VIGRIENGERLPMPPN-----CPPTLYSLMTKCWA 247

Query: 665 DEPNLRPSMKNVILMLEGTME 685
            +P+ RP    +   L   +E
Sbjct: 248 YDPSRRPRFTELKAQLSTILE 268

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 4e-31
 Identities = 52/226 (23%), Positives = 89/226 (39%), Gaps = 30/226 (13%)

Query: 476 VYKHRSSKKLLVYEFMSKGSLADLLFNLETRPL---------------WRDRVRIALDVA 520
                    +++ EF   G+L+  L +     +                   +  +  VA
Sbjct: 85  ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVA 144

Query: 521 RGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRG 579
           +G+ +L      + IH D+  RNIL+ +    KI DFGLA+ +  +   +  G  R    
Sbjct: 145 KGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 201

Query: 580 YMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEF 639
           +MAPE     + T++SDV+SFGV+L EI    ++    V   +E                
Sbjct: 202 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-----------RL 250

Query: 640 NKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME 685
            +         T   M +T L C   EP+ RP+   ++  L   ++
Sbjct: 251 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 8e-30
 Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 17/207 (8%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I + L       +  +V E+++ GSL D++   ET         +  +  + L +LH   
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSN- 135

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
             Q+IH DIK  NIL+      K++DFG    + P Q+     V G+  +MAPE      
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKA 192

Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI 650
              K D++S G++ +E+I     +    +      L     N     +  + +       
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYL---NENPLRALYLIATNGTPELQNPEKLSAIFRDF 249

Query: 651 TLERMVKTGLLCIQDEPNLRPSMKNVI 677
            L R       C+  +   R S K ++
Sbjct: 250 -LNR-------CLDMDVEKRGSAKELL 268

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (290), Expect = 3e-29
 Identities = 53/224 (23%), Positives = 86/224 (38%), Gaps = 31/224 (13%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPL---------------WRDRVRIALDVARGL 523
            +     ++ E+ SKG+L + L       L                +D V  A  VARG+
Sbjct: 89  TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 148

Query: 524 LYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA-GVRGSRGYMA 582
            YL  +   + IH D+  RN+L+ +    KI+DFGLA+ +            R    +MA
Sbjct: 149 EYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 205

Query: 583 PEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKL 642
           PE     + T +SDV+SFGV+L EI     +    V           ++     G     
Sbjct: 206 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-------ELFKLLKEGHRMDK 258

Query: 643 VEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEI 686
                       +      C    P+ RP+ K ++  L+  + +
Sbjct: 259 PSNCT-----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 297

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (290), Expect = 3e-29
 Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 25/217 (11%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETR---------PLWRDRVRIALDVARGLLYLHDE 529
            +    L++ E M++G L   L +L            P     +++A ++A G+ YL+  
Sbjct: 93  SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN 152

Query: 530 CEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEWQNS 588
              + +H D+  RN ++ + +  KI DFG+ + +         G       +M+PE    
Sbjct: 153 ---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD 209

Query: 589 GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD 648
           G+ T  SDV+SFGVVL EI          +S          V    + G      +    
Sbjct: 210 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-------QVLRFVMEGGLLDKPDN--- 259

Query: 649 KITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME 685
               + + +   +C Q  P +RPS   +I  ++  ME
Sbjct: 260 --CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  114 bits (287), Expect = 2e-28
 Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 17/209 (8%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           + +L       ++ +++YEFMS G L + + +   +    + V     V +GL ++H+  
Sbjct: 85  LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 144

Query: 531 EVQIIHCDIKLRNILI--DDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS 588
               +H D+K  NI+     S   K+ DFGL   L P Q+  V    G+  + APE    
Sbjct: 145 ---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV--TTGTAEFAAPEVAEG 199

Query: 589 GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD 648
             +   +D++S GV+   ++   S F       DE L +    +  +       + E+  
Sbjct: 200 KPVGYYTDMWSVGVLSYILLSGLSPFGGE--NDDETLRNVKSCDWNMDDSAFSGISEDGK 257

Query: 649 KITLERMVKTGLLCIQDEPNLRPSMKNVI 677
              + +        +  +PN R ++   +
Sbjct: 258 DF-IRK-------LLLADPNTRMTIHQAL 278

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  109 bits (273), Expect = 1e-26
 Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 17/194 (8%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           L+ EF+S G L D +   + +    + +        GL ++H+     I+H DIK  NI+
Sbjct: 103 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIM 159

Query: 546 ID--DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
            +   +   KI DFGLA  L P++   V     +  + APE  +   +   +D+++ GV+
Sbjct: 160 CETKKASSVKIIDFGLATKLNPDEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVL 217

Query: 604 LLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCI 663
              ++   S F        E  L T         EF++     V     + +       +
Sbjct: 218 GYVLLSGLSPFA------GEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN----LL 267

Query: 664 QDEPNLRPSMKNVI 677
           Q EP  R ++ + +
Sbjct: 268 QKEPRKRLTVHDAL 281

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  107 bits (268), Expect = 2e-26
 Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 22/198 (11%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV++ M KG L D L    T    ++  +I   +   +  LH      I+H D+K  NIL
Sbjct: 87  LVFDLMKKGELFDYLTEKVTLS-EKETRKIMRALLEVICALHKLN---IVHRDLKPENIL 142

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW------QNSGLITVKSDVYS 599
           +DD    K++DFG +  L P +   +  V G+  Y+APE        N      + D++S
Sbjct: 143 LDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 200

Query: 600 FGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTG 659
            GV++  ++     F          ++ +  Y  F + E++   +   D ++        
Sbjct: 201 TGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ-FGSPEWDDYSDTVKDLVS-------- 251

Query: 660 LLCIQDEPNLRPSMKNVI 677
              +  +P  R + +  +
Sbjct: 252 -RFLVVQPQKRYTAEEAL 268

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 4e-26
 Identities = 35/209 (16%), Positives = 69/209 (33%), Gaps = 23/209 (11%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
              L        K      +   G L   +  + +              A  +  L    
Sbjct: 70  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTAEIVSALEYLH 125

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAG-VRGSRGYMAPEWQNSG 589
              IIH D+K  NIL+++    +I+DFG AK+L P      A    G+  Y++PE     
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 185

Query: 590 LITVKSDVYSFGVVLLEIICCRSNF--EVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV 647
                SD+++ G ++ +++     F          +++   + +      +   LVE+  
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEK-- 243

Query: 648 DKITLERMVKTGLLCIQDEPNLRPSMKNV 676
                          +  +   R   + +
Sbjct: 244 --------------LLVLDATKRLGCEEM 258

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (267), Expect = 8e-26
 Identities = 39/199 (19%), Positives = 80/199 (40%), Gaps = 19/199 (9%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPL-WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           L+V E +  G L   + +   +    R+   I   +   + YLH      I H D+K  N
Sbjct: 85  LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPEN 141

Query: 544 ILIDDSW---RAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSF 600
           +L          K++DFG AK    + +        +  Y+APE           D++S 
Sbjct: 142 LLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYYVAPEVLGPEKYDKSCDMWSL 199

Query: 601 GVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKIT--LERMVKT 658
           GV++  ++C    F  N      + +S  +      G++ +    E  +++  ++ +++ 
Sbjct: 200 GVIMYILLCGYPPFYSN----HGLAISPGMKTRIRMGQY-EFPNPEWSEVSEEVKMLIRN 254

Query: 659 GLLCIQDEPNLRPSMKNVI 677
               ++ EP  R ++   +
Sbjct: 255 ---LLKTEPTQRMTITEFM 270

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  105 bits (263), Expect = 3e-25
 Identities = 45/204 (22%), Positives = 78/204 (38%), Gaps = 19/204 (9%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  +    H   K   + + M+ G L   L          D    A ++  GL ++H+  
Sbjct: 69  IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMHNRF 127

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
              +++ D+K  NIL+D+    +ISD GLA      +        G+ GYMAPE    G+
Sbjct: 128 ---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA---SVGTHGYMAPEVLQKGV 181

Query: 591 -ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK 649
                +D +S G +L +++   S F  + +     +    +       E       E+  
Sbjct: 182 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV---ELPDSFSPELRS 238

Query: 650 ITLERMVKTGLLCIQDEPNLRPSM 673
           + LE         +Q + N R   
Sbjct: 239 L-LEG-------LLQRDVNRRLGC 254

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  103 bits (258), Expect = 7e-25
 Identities = 42/209 (20%), Positives = 83/209 (39%), Gaps = 17/209 (8%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I +L           L+ + +S G L D +   +     RD  R+   V   + YLHD  
Sbjct: 69  IVALDDIYESGGHLYLIMQLVSGGELFDRIVE-KGFYTERDASRLIFQVLDAVKYLHDLG 127

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
            V        L    +D+  +  ISDFGL+K+  P     ++   G+ GY+APE      
Sbjct: 128 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV--LSTACGTPGYVAPEVLAQKP 185

Query: 591 ITVKSDVYSFGVVLLEIICCRSNF--EVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD 648
            +   D +S GV+   ++C    F  E +    +++L + + ++     + +   ++ + 
Sbjct: 186 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 245

Query: 649 KITLERMVKTGLLCIQDEPNLRPSMKNVI 677
                         ++ +P  R + +  +
Sbjct: 246 H------------LMEKDPEKRFTCEQAL 262

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 2e-24
 Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 19/208 (9%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           ++ +            V E+++ G L   + +             A ++  GL +LH + 
Sbjct: 65  LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFD-LSRATFYAAEIILGLQFLHSKG 123

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
              I++ D+KL NIL+D     KI+DFG+ K  M           G+  Y+APE      
Sbjct: 124 ---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA-KTNTFCGTPDYIAPEILLGQK 179

Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI 650
                D +SFGV+L E++  +S F       DE  L   +        + + +E+E   +
Sbjct: 180 YNHSVDWWSFGVLLYEMLIGQSPFH----GQDEEELFHSIRMDNP--FYPRWLEKEAKDL 233

Query: 651 TLERMVKTGLLCIQDEPNLRPSMKNVIL 678
            L +           EP  R  ++  I 
Sbjct: 234 -LVK-------LFVREPEKRLGVRGDIR 253

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  100 bits (251), Expect = 3e-24
 Identities = 40/189 (21%), Positives = 79/189 (41%), Gaps = 16/189 (8%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V E++   +L D++         +  + +  D  + L + H      IIH D+K  NI+
Sbjct: 88  IVMEYVDGVTLRDIVHTEGPMT-PKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 143

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIV--AGVRGSRGYMAPEWQNSGLITVKSDVYSFGVV 603
           I  +   K+ DFG+A+ +  +   +   A V G+  Y++PE      +  +SDVYS G V
Sbjct: 144 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 203

Query: 604 LLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCI 663
           L E++     F  +  +   V       +       ++ +  ++D + + +        +
Sbjct: 204 LYEVLTGEPPFTGD--SPVSVAYQHVREDPIPPSARHEGLSADLDAV-VLK-------AL 253

Query: 664 QDEPNLRPS 672
              P  R  
Sbjct: 254 AKNPENRYQ 262

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (251), Expect = 7e-24
 Identities = 40/210 (19%), Positives = 81/210 (38%), Gaps = 21/210 (10%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L        + ++++EF+S   + + +         R+ V     V   L +LH   
Sbjct: 63  ILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH- 121

Query: 531 EVQIIHCDIKLRNILID--DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNS 588
              I H DI+  NI+     S   KI +FG A+ L P     +  +  +  Y APE    
Sbjct: 122 --NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL--LFTAPEYYAPEVHQH 177

Query: 589 GLITVKSDVYSFGVVLLEIICCRSNF--EVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE 646
            +++  +D++S G ++  ++   + F  E N    + ++ + + ++     E +    + 
Sbjct: 178 DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDF 237

Query: 647 VDKITLERMVKTGLLCIQDEPNLRPSMKNV 676
           VD+             +  E   R +    
Sbjct: 238 VDR------------LLVKERKSRMTASEA 255

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.4 bits (247), Expect = 8e-24
 Identities = 42/209 (20%), Positives = 72/209 (34%), Gaps = 28/209 (13%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           +  LL +  R    +L+ E                             V   + +     
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC---H 127

Query: 531 EVQIIHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW-QNS 588
              ++H DIK  NILID +    K+ DFG   LL            G+R Y  PEW +  
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPPEWIRYH 184

Query: 589 GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD 648
                 + V+S G++L +++C    FE      +E++     +   V+ E   L+     
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFE----HDEEIIRGQVFFRQRVSSECQHLIR---- 236

Query: 649 KITLERMVKTGLLCIQDEPNLRPSMKNVI 677
                        C+   P+ RP+ + + 
Sbjct: 237 ------------WCLALRPSDRPTFEEIQ 253

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.4 bits (244), Expect = 4e-23
 Identities = 42/205 (20%), Positives = 76/205 (37%), Gaps = 18/205 (8%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV+E + +     L    E          +   + RGL +LH      ++H D+K +NIL
Sbjct: 92  LVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNIL 148

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
           +  S + K++DFGLA++        +  V  +  Y APE           D++S G +  
Sbjct: 149 VTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFA 206

Query: 606 EIICCRSNFEVN-----VSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKT-- 658
           E+   +  F  +     +    +V+      +        +          +E+ V    
Sbjct: 207 EMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDID 266

Query: 659 ----GLL--CIQDEPNLRPSMKNVI 677
                LL  C+   P  R S  + +
Sbjct: 267 ELGKDLLLKCLTFNPAKRISAYSAL 291

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 95.7 bits (237), Expect = 3e-22
 Identities = 36/222 (16%), Positives = 65/222 (29%), Gaps = 23/222 (10%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I ++          ++V E +   SL DL      +   +  + +A  +   + Y+H   
Sbjct: 65  IPTIRWCGAEGDYNVMVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH--- 120

Query: 531 EVQIIHCDIKLRNILI---DDSWRAKISDFGLAKLLMPNQTGIVA------GVRGSRGYM 581
               IH D+K  N L+          I DFGLAK     +T           + G+  Y 
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 582 APEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNC--FVAGEF 639
           +         + + D+ S G VL+        ++   +                      
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 640 NKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE 681
            K    E     L         C     + +P    +  +  
Sbjct: 241 CKGYPSEFATY-LNF-------CRSLRFDDKPDYSYLRQLFR 274

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 92.9 bits (230), Expect = 2e-21
 Identities = 32/225 (14%), Positives = 64/225 (28%), Gaps = 24/225 (10%)

Query: 474 LLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ 533
            + Y  +     ++   +   SL DLL     +   +     A  +   +  +H   E  
Sbjct: 65  NVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKS 121

Query: 534 IIHCDIKLRNILIDD-----SWRAKISDFGLAKLLMPNQTGIVA------GVRGSRGYMA 582
           +++ DIK  N LI       +    + DFG+ K      T           + G+  YM+
Sbjct: 122 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMS 181

Query: 583 PEWQNSGLITVKSDVYSFGVVLLEIICCRSNF--EVNVSTADEVLLSTWVYNCFVAGEFN 640
                    + + D+ + G V +  +     +      +   +              E  
Sbjct: 182 INTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELC 241

Query: 641 KLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME 685
               EE  K                  +  P    +  +    +E
Sbjct: 242 AGFPEEFYKYM--------HYARNLAFDATPDYDYLQGLFSKVLE 278

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 92.5 bits (229), Expect = 5e-21
 Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  +      + +  ++ +++  G L  LL   +  P    +   A +V   L YLH + 
Sbjct: 66  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAK-FYAAEVCLALEYLHSKD 124

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
              II+ D+K  NIL+D +   KI+DFG AK +      +     G+  Y+APE  ++  
Sbjct: 125 ---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLC----GTPDYIAPEVVSTKP 177

Query: 591 ITVKSDVYSFGVVLLEIICCRSNFE 615
                D +SFG+++ E++   + F 
Sbjct: 178 YNKSIDWWSFGILIYEMLAGYTPFY 202

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.3 bits (223), Expect = 2e-20
 Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 20/223 (8%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  LL   H  +K  LV+EF+ +     +  +  T             + +GL + H   
Sbjct: 63  IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSG 589
              ++H D+K +N+LI+     K++DFGLA+            V  +  Y APE      
Sbjct: 123 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILLGCK 178

Query: 590 LITVKSDVYSFGVVLLEIICCRSNFE------------VNVSTADEVLLSTWVYNCFVAG 637
             +   D++S G +  E++  R+ F               + T DEV+            
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238

Query: 638 EFNKLVEEEVDKI--TLERMVKTGLL-CIQDEPNLRPSMKNVI 677
            F K   ++  K+   L+   ++ L   +  +PN R S K  +
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.9 bits (222), Expect = 3e-20
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 6/145 (4%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  LL      S   LV++FM       ++ +              L   +GL YLH   
Sbjct: 62  IIGLLDAFGHKSNISLVFDFMETDLE-VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 120

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSG 589
              I+H D+K  N+L+D++   K++DFGLAK            V  +R Y APE    + 
Sbjct: 121 ---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQV-VTRWYRAPELLFGAR 176

Query: 590 LITVKSDVYSFGVVLLEIICCRSNF 614
           +  V  D+++ G +L E++      
Sbjct: 177 MYGVGVDMWAVGCILAELLLRVPFL 201

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.9 bits (217), Expect = 1e-19
 Identities = 41/211 (19%), Positives = 83/211 (39%), Gaps = 20/211 (9%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           + +L       +  +L+ E ++ G L D L   +      +       +  G+   +   
Sbjct: 75  VITLHEVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGV---YYLH 130

Query: 531 EVQIIHCDIKLRNILIDD----SWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQ 586
            +QI H D+K  NI++ D      R KI DFGLA  +          + G+  ++APE  
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIV 188

Query: 587 NSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE 646
           N   + +++D++S GV+   ++   S F        +    T      V  EF       
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFL------GDTKQETLANVSAVNYEFEDEYFSN 242

Query: 647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVI 677
              +  + + +     +  +P  R ++++ +
Sbjct: 243 TSALAKDFIRR----LLVKDPKKRMTIQDSL 269

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.4 bits (218), Expect = 2e-19
 Identities = 46/207 (22%), Positives = 80/207 (38%), Gaps = 10/207 (4%)

Query: 479 HRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCD 538
               K + +   +    L  LL                  + RGL Y+H      ++H D
Sbjct: 80  IEQMKDVYLVTHLMGADLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSA---NVLHRD 134

Query: 539 IKLRNILIDDSWRAKISDFGLAKLLMPNQT--GIVAGVRGSRGYMAPE-WQNSGLITVKS 595
           +K  N+L++ +   KI DFGLA++  P+    G +     +R Y APE   NS   T   
Sbjct: 135 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 194

Query: 596 DVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERM 655
           D++S G +L E++  R  F       D++     +       + N ++  +     L   
Sbjct: 195 DIWSVGCILAEMLSNRPIFPGK-HYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 253

Query: 656 VKTGLLCIQDEPNLRPSMKNVIL-MLE 681
            K  +   +  PN      +++  ML 
Sbjct: 254 HKNKVPWNRLFPNADSKALDLLDKMLT 280

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.1 bits (215), Expect = 3e-19
 Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 5/145 (3%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           +++L        +   V E+ + G L   L    +R       R     A  +  L    
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLH 122

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
              +++ DIKL N+++D     KI+DFGL K  + +   +     G+  Y+APE      
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLEDND 181

Query: 591 ITVKSDVYSFGVVLLEIICCRSNFE 615
                D +  GVV+ E++C R  F 
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFY 206

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.2 bits (215), Expect = 4e-19
 Identities = 42/211 (19%), Positives = 73/211 (34%), Gaps = 24/211 (11%)

Query: 486 LVYEFMSKGSLADLLFNLETRPL--WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN 543
           LV +++ +            +              + R L Y+H      I H DIK +N
Sbjct: 96  LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQN 152

Query: 544 ILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAP-EWQNSGLITVKSDVYSFG 601
           +L+D D+   K+ DFG AK L+  +  +      SR Y AP     +   T   DV+S G
Sbjct: 153 LLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGATDYTSSIDVWSAG 210

Query: 602 VVLLEIICCRSNFE-----------VNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI 650
            VL E++  +  F            + V           +   +   +F ++      K+
Sbjct: 211 CVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV 270

Query: 651 TLERMVKTGL----LCIQDEPNLRPSMKNVI 677
              R     +      ++  P  R +     
Sbjct: 271 FRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.9 bits (209), Expect = 1e-18
 Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 8/134 (5%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV++F        LL N+  +    +  R+   +  GL   +     +I+H D+K  N+L
Sbjct: 94  LVFDFCEHDLA-GLLSNVLVKFTLSEIKRVMQMLLNGL---YYIHRNKILHRDMKAANVL 149

Query: 546 IDDSWRAKISDFGLAKLLMPNQTG---IVAGVRGSRGYMAPEW-QNSGLITVKSDVYSFG 601
           I      K++DFGLA+     +            +  Y  PE            D++  G
Sbjct: 150 ITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAG 209

Query: 602 VVLLEIICCRSNFE 615
            ++ E+       +
Sbjct: 210 CIMAEMWTRSPIMQ 223

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 83.8 bits (206), Expect = 2e-18
 Identities = 41/223 (18%), Positives = 75/223 (33%), Gaps = 21/223 (9%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           I  L    H   + +LV+E + +     L    E            L +  G+ Y HD  
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRR 120

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
              ++H D+K +N+LI+     KI+DFGLA+            +             S  
Sbjct: 121 ---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177

Query: 591 ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI 650
            +   D++S G +  E++     F   VS AD+++    +     +  +  + E      
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFP-GVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236

Query: 651 TLERMVKTGLL----------------CIQDEPNLRPSMKNVI 677
                                       ++ +PN R + K  +
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 81.8 bits (201), Expect = 2e-17
 Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 8/145 (5%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           +  L      +S   +V E+++ G +   L  +            A  +     YLH   
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSL- 160

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
              +I+ D+K  N+LID     +++DFG AK +          + G+   +APE   S  
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW----TLCGTPEALAPEIILSKG 214

Query: 591 ITVKSDVYSFGVVLLEIICCRSNFE 615
                D ++ GV++ E+      F 
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFF 239

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.8 bits (198), Expect = 2e-17
 Identities = 34/216 (15%), Positives = 67/216 (31%), Gaps = 20/216 (9%)

Query: 477 YKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIH 536
             H   K  LV+EF  +                         + +GL + H      ++H
Sbjct: 69  VLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLH 124

Query: 537 CDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSD 596
            D+K +N+LI+ +   K+++FGLA+          A V             + L +   D
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSID 184

Query: 597 VYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMV 656
           ++S G +  E+              D++     +       ++  + +    K       
Sbjct: 185 MWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPA 244

Query: 657 KTGLL----------------CIQDEPNLRPSMKNV 676
            T L+                 ++  P  R S +  
Sbjct: 245 TTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 80.3 bits (197), Expect = 6e-17
 Identities = 42/216 (19%), Positives = 80/216 (37%), Gaps = 19/216 (8%)

Query: 476 VYKHRSSKKL-LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQI 534
           + K   S+   LV+E ++      L   L       D      ++ + L Y H      I
Sbjct: 98  IVKDPVSRTPALVFEHVNNTDFKQLYQTLT----DYDIRFYMYEILKALDYCHSMG---I 150

Query: 535 IHCDIKLRNILID-DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPE-WQNSGLIT 592
           +H D+K  N++ID +  + ++ D+GLA+   P Q   V     SR +  PE   +  +  
Sbjct: 151 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDYQMYD 208

Query: 593 VKSDVYSFGVVLLEIICCRSNFEVNVSTAD------EVLLSTWVYNCFVAGEFNKLVEEE 646
              D++S G +L  +I  +  F       D      +VL +  +Y+              
Sbjct: 209 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFN 268

Query: 647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVIL-MLE 681
                  R      +  +++  + P   + +  +L 
Sbjct: 269 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 304

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.5 bits (195), Expect = 9e-17
 Identities = 44/205 (21%), Positives = 85/205 (41%), Gaps = 16/205 (7%)

Query: 471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC 530
           + +L       +K  L+ ++++ G L   L   E          + + V   +L L    
Sbjct: 91  LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE----VQIYVGEIVLALEHLH 146

Query: 531 EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGL 590
           ++ II+ DIKL NIL+D +    ++DFGL+K  + ++T       G+  YMAP+    G 
Sbjct: 147 KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGD 206

Query: 591 --ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD 648
                  D +S GV++ E++   S F V+     +  +S  +        + + +     
Sbjct: 207 SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP--PYPQEMSALAK 264

Query: 649 KITLERMVKTGLLCIQDEPNLRPSM 673
            + ++R        +  +P  R   
Sbjct: 265 DL-IQR-------LLMKDPKKRLGC 281

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.8 bits (188), Expect = 9e-16
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 11/130 (8%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV  FM  G+    L     +        +   + +GL Y+H      IIH D+K  N+ 
Sbjct: 100 LVMPFM--GTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLA 153

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW-QNSGLITVKSDVYSFGVVL 604
           +++    KI DFGLA+      TG V     +R Y APE   N    T   D++S G ++
Sbjct: 154 VNEDCELKILDFGLARQADSEMTGYV----VTRWYRAPEVILNWMRYTQTVDIWSVGCIM 209

Query: 605 LEIICCRSNF 614
            E+I  ++ F
Sbjct: 210 AEMITGKTLF 219

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 66.9 bits (163), Expect = 5e-14
 Identities = 30/149 (20%), Positives = 53/149 (35%), Gaps = 36/149 (24%)

Query: 125 ASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNM 184
             + ++GN +LYS       +       T+   QSL                   + L+M
Sbjct: 3   VVVANNGNSILYST------QGNDNHPQTLHATQSL---------------QLSPYRLSM 41

Query: 185 QEDGNIVLYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFR 244
           + D N+VL+ R+      +  W+  T  +       +  L PNG + +L+       ++ 
Sbjct: 42  ETDCNLVLFDRD------DRVWSTNTAGKG---TGCRAVLQPNGRMDVLTNQN--IAVWT 90

Query: 245 SSYSLKSMNETVIYRTTLDSDGILRLYSH 273
           S  S  +      Y   L  D  L +Y  
Sbjct: 91  SGNSRSAGR----YVFVLQPDRNLAIYGG 115

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 59.9 bits (145), Expect = 1e-11
 Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 34/142 (23%)

Query: 66  IWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFA 125
           I   T  N     T +  +    S   L++  D  L+L  +        +         A
Sbjct: 12  ILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVL-FDRDDRVWSTNTAGKGTGCRA 70

Query: 126 SMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQ 185
            +  +G   + +N++  +W S                           + S GR+   +Q
Sbjct: 71  VLQPNGRMDVLTNQNIAVWTSG-------------------------NSRSAGRYVFVLQ 105

Query: 186 EDGNIVLYPRNMLNKALEAYWA 207
            D N+ +Y          A W 
Sbjct: 106 PDRNLAIYGG--------ALWT 119

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 71.2 bits (173), Expect = 7e-14
 Identities = 36/162 (22%), Positives = 63/162 (38%), Gaps = 12/162 (7%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           +V+E + +  LA +              +I+  +  GL Y+H  C   IIH DIK  N+L
Sbjct: 101 MVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVL 158

Query: 546 ID------DSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYS 599
           ++      +  + KI+D G A     + T        +R Y +PE          +D++S
Sbjct: 159 MEIVDSPENLIQIKIADLGNACWYDEHYTN----SIQTREYRSPEVLLGAPWGCGADIWS 214

Query: 600 FGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNK 641
              ++ E+I     FE +   +             + GE   
Sbjct: 215 TACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPS 256

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 66.2 bits (161), Expect = 8e-14
 Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 32/142 (22%)

Query: 132 NFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIV 191
           N +++S       +        +   +SLE               T  +   MQ D N+V
Sbjct: 1   NNIIFS------KQPDDNHPQILHATESLE-----------ILFGTHVYRFIMQTDCNLV 43

Query: 192 LYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKS 251
           LY  N         WA  T          +  L P+GVL +++       +++S  + K+
Sbjct: 44  LYDNN------NPIWATNTG---GLGNGCRAVLQPDGVLVVITNEN--VTVWQSPVAGKA 92

Query: 252 MNETVIYRTTLDSDGILRLYSH 273
            +    Y   L  D  + +Y  
Sbjct: 93  GH----YVLVLQPDRNVVIYGD 110

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 40.8 bits (95), Expect = 6e-05
 Identities = 23/140 (16%), Positives = 40/140 (28%), Gaps = 36/140 (25%)

Query: 73  NITVVWTANRDEQPMPSNATLALTM--DGKLILKTEESKEKPIADLVFDEPASFASMLDS 130
           N   +  A    + +         M  D  L+L  + +      +         A +   
Sbjct: 12  NHPQILHATESLEILFGTHVYRFIMQTDCNLVL-YDNNNPIWATNTGGLGNGCRAVLQPD 70

Query: 131 GNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNI 190
           G  V+ +N +  +W+S                               G + L +Q D N+
Sbjct: 71  GVLVVITNENVTVWQSP-------------------------VAGKAGHYVLVLQPDRNV 105

Query: 191 VLYPRNMLNKALEAYWANGT 210
           V+Y          A WA  T
Sbjct: 106 VIYGD--------ALWATQT 117

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (170), Expect = 2e-13
 Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 9/129 (6%)

Query: 486 LVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNIL 545
           LV E M       +   L+          +   +  G+ +LH      IIH D+K  NI+
Sbjct: 99  LVMELMDANLCQVIQMELD----HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 151

Query: 546 IDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLL 605
           +      KI DFGLA+    +    +     +R Y APE           D++S G ++ 
Sbjct: 152 VKSDCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 209

Query: 606 EIICCRSNF 614
           E++  +  F
Sbjct: 210 EMVRHKILF 218

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 61.9 bits (150), Expect = 2e-12
 Identities = 25/145 (17%), Positives = 43/145 (29%), Gaps = 35/145 (24%)

Query: 66  IWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFA 125
           I    S   +   T +  +    S+    +  D  L+L   +S  +  A          A
Sbjct: 3   ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLF--DSDVRVWASNTAGATGCRA 60

Query: 126 SMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQ 185
            +   G  V+ + ++ I W S                          T  S G + L +Q
Sbjct: 61  VLQSDGLLVILTAQNTIRWSSG-------------------------TKGSIGNYVLVLQ 95

Query: 186 EDGNIVLYPRNMLNKALEAYWANGT 210
            D  + +Y            W +GT
Sbjct: 96  PDRTVTIYG--------PGLWDSGT 112

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 48.0 bits (114), Expect = 2e-07
 Identities = 29/151 (19%), Positives = 47/151 (31%), Gaps = 37/151 (24%)

Query: 132 NFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIV 191
           N +L+            +   T+   QSLE                  F   MQ D N+V
Sbjct: 1   NNILFGLSHE------GSHPQTLHAAQSLELS---------------SFRFTMQSDCNLV 39

Query: 192 LYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKS 251
           L+  +         WA+ T   +      +  L  +G+L +L+      I + S      
Sbjct: 40  LFDSD------VRVWASNTAGAT----GCRAVLQSDGLLVILTAQN--TIRWSSGTK--- 84

Query: 252 MNETVIYRTTLDSDGILRLYSHHFKNDGNST 282
                 Y   L  D  + +Y     + G S 
Sbjct: 85  -GSIGNYVLVLQPDRTVTIYGPGLWDSGTSN 114

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 61.1 bits (148), Expect = 3e-12
 Identities = 20/122 (16%), Positives = 40/122 (32%), Gaps = 15/122 (12%)

Query: 27  KSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQP 86
           ++ ++ G  L        +     + F   +  +       LV   + T VW +N     
Sbjct: 1   RNLLTNGEGLYAGQ----SLDVEPYHFIMQEDCN-------LVLYDHSTSVWASNTG-IL 48

Query: 87  MPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWES 146
                   L  DG  ++   E +    +  V         + + GN V+Y +    IW +
Sbjct: 49  GKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD---IWST 105

Query: 147 FS 148
            +
Sbjct: 106 GT 107

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 54.6 bits (131), Expect = 8e-10
 Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 23/122 (18%)

Query: 152 DTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTD 211
           + +  G+ L  G+ L             +   MQED N+VLY  +       + WA+ T 
Sbjct: 2   NLLTNGEGLYAGQSL---------DVEPYHFIMQEDCNLVLYDHS------TSVWASNTG 46

Query: 212 IQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLY 271
           I  +     K  L  +G   +           RS ++  S+     Y   L  DG + +Y
Sbjct: 47  ILGKKGC--KAVLQSDGNFVVYDAE------GRSLWASHSVRGNGNYVLVLQEDGNVVIY 98

Query: 272 SH 273
             
Sbjct: 99  GS 100

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.8 bits (154), Expect = 2e-11
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 10/132 (7%)

Query: 485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNI 544
           + +   +    L +++     +        +   + RGL Y+H      IIH D+K  N+
Sbjct: 98  VYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNL 152

Query: 545 LIDDSWRAKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEW-QNSGLITVKSDVYSFGVV 603
            +++    KI DFGLA+      TG       +R Y APE   N        D++S G +
Sbjct: 153 AVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208

Query: 604 LLEIICCRSNFE 615
           + E++  R+ F 
Sbjct: 209 MAELLTGRTLFP 220

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 56.6 bits (136), Expect = 1e-10
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 24/123 (19%)

Query: 152 DTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTD 211
           + +  G++L  GE L         + G F   MQED N+VLY  +      +  WA  T 
Sbjct: 2   NILYSGETLSTGEFL---------NYGSFVFIMQEDCNLVLYDVD------KPIWATNTG 46

Query: 212 IQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLY 271
             S   +   L++  +G L + + +   K ++ S+   ++ N    Y   L  D  + +Y
Sbjct: 47  GLSRSCF---LSMQTDGNLVVYNPS--NKPIWASNTGGQNGN----YVCILQKDRNVVIY 97

Query: 272 SHH 274
              
Sbjct: 98  GTD 100

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 43.5 bits (102), Expect = 7e-06
 Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 16/121 (13%)

Query: 28  STISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPM 87
           + +  G +LS     +     G F F   +  +       LV       +W  N     +
Sbjct: 2   NILYSGETLSTGEFLN----YGSFVFIMQEDCN-------LVLYDVDKPIWATNT--GGL 48

Query: 88  PSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESF 147
             +  L++  DG L++    +K    ++           +    N V+Y       W + 
Sbjct: 49  SRSCFLSMQTDGNLVVYNPSNKPIWASNTGGQNGNYVCILQKDRNVVIYGTD---RWATG 105

Query: 148 S 148
           +
Sbjct: 106 T 106

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

 Score = 56.7 bits (136), Expect = 2e-10
 Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 25/123 (20%)

Query: 151 TDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGT 210
           +D +  G  L+ G  L           G +   +Q D N+VLY  N       A WA+GT
Sbjct: 1   SDRLNSGHQLDTGGSLAE---------GGYLFIIQNDCNLVLYDNN------RAVWASGT 45

Query: 211 DIQSEYPYSVKLNLSPNGVLQLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRL 270
           + ++       L +  +G L + SG++         ++  +  +   Y   L  D  + +
Sbjct: 46  NGKAS---GCVLKMQNDGNLVIYSGSRA-------IWASNTNRQNGNYYLILQRDRNVVI 95

Query: 271 YSH 273
           Y +
Sbjct: 96  YDN 98

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

 Score = 50.6 bits (120), Expect = 2e-08
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 14/124 (11%)

Query: 29  TISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMP 88
            ++ G  L   G      + G + F      +       LV   N   VW +        
Sbjct: 3   RLNSGHQLDTGGS----LAEGGYLFIIQNDCN-------LVLYDNNRAVWASGT--NGKA 49

Query: 89  SNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFS 148
           S   L +  DG L++ +        ++        +  +    N V+Y N +  IW + +
Sbjct: 50  SGCVLKMQNDGNLVIYSGSRAIW-ASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHT 108

Query: 149 TPTD 152
              +
Sbjct: 109 NVGN 112

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 50.2 bits (119), Expect = 1e-07
 Identities = 8/53 (15%), Positives = 19/53 (35%), Gaps = 4/53 (7%)

Query: 509 WRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK 561
             +   +   +   +   +      I+H D+   N+L+ +     I DF  + 
Sbjct: 102 VENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVSE-EGIWIIDFPQSV 150

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	702
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.98
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.98
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.97
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.97
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.96
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	99.86
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.83
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.81
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.78
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.7
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.63
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.53
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.44
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.34
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.27
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.23
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.2
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	99.14
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	96.94
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	96.07
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	94.02
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	93.17
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	89.03
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	83.51
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	80.19

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-40  Score=338.92  Aligned_cols=222  Identities=21%  Similarity=0.222  Sum_probs=178.9

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCCeeEEEEe
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      .+.++..+.||+|+|  ||++....  ..||||                            |+++++++++++..|||||
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            456677789999988  88887653  678887                            8999999999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC-
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT-  568 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-  568 (702)
                      |+++|+|.+++.... .+++.++..++.||++||+|||++   +|+||||||+|||+++++.+||+|||+|+....... 
T Consensus        84 y~~gg~L~~~l~~~~-~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~  159 (271)
T d1nvra_          84 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  159 (271)
T ss_dssp             CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             ccCCCcHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeeccCCcc
Confidence            999999999997654 799999999999999999999999   999999999999999999999999999997644332 


Q ss_pred             ceeeceeccccccCcccccCCCC-CccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLI-TVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                      .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||..........  ..     ........    ..
T Consensus       160 ~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~--~~-----~~~~~~~~----~~  228 (271)
T d1nvra_         160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY--SD-----WKEKKTYL----NP  228 (271)
T ss_dssp             CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHH--HH-----HHTTCTTS----TT
T ss_pred             ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHH--HH-----HhcCCCCC----Cc
Confidence            23445789999999999987765 678999999999999999999997542221111  11     11111100    11


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ....++.+.+++.+||+.||++|||++|+++
T Consensus       229 ~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         229 WKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1223567788999999999999999999875

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-41  Score=340.48  Aligned_cols=225  Identities=23%  Similarity=0.278  Sum_probs=172.3

Q ss_pred             ccccceEEEeEE--EEEeeeeh-hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCCCC
Q 038002          445 VNDKRKLLTVLA--GCLGSITF-LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSKGS  495 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~-~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~gs  495 (702)
                      ++..++||+|+|  ||++.... ..||||                          |+++++++..++..++||||+++|+
T Consensus         7 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~   86 (263)
T d1sm2a_           7 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC   86 (263)
T ss_dssp             EEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred             cEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCc
Confidence            445678999998  99998765 568888                          9999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeecee
Q 038002          496 LADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR  575 (702)
Q Consensus       496 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  575 (702)
                      |.+++......+++..++.++.||++||+|||++   +|+||||||+|||++.++.+||+|||+++..............
T Consensus        87 L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~  163 (263)
T d1sm2a_          87 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK  163 (263)
T ss_dssp             HHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC-----------------
T ss_pred             HHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccCCCceeeccee
Confidence            9999988776799999999999999999999999   9999999999999999999999999999877554444444567


Q ss_pred             ccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHH
Q 038002          576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERM  655 (702)
Q Consensus       576 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  655 (702)
                      ||+.|+|||++.+..++.++|||||||++|||+|+..|+..... .  ....    .....+.     ....+...++++
T Consensus       164 gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~-~--~~~~----~~i~~~~-----~~~~p~~~~~~l  231 (263)
T d1sm2a_         164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-N--SEVV----EDISTGF-----RLYKPRLASTHV  231 (263)
T ss_dssp             -CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC-H--HHHH----HHHHHTC-----CCCCCTTSCHHH
T ss_pred             cCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC-H--HHHH----HHHHhcC-----CCCCccccCHHH
Confidence            89999999999999999999999999999999996444432211 1  1111    1111111     111223345678


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          656 VKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       656 ~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .+++.+||+.||++|||++||+++|+++.
T Consensus       232 ~~li~~cl~~~p~~Rps~~~il~~L~~i~  260 (263)
T d1sm2a_         232 YQIMNHCWKERPEDRPAFSRLLRQLAEIA  260 (263)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence            99999999999999999999999998764

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-40  Score=337.09  Aligned_cols=228  Identities=23%  Similarity=0.294  Sum_probs=175.9

Q ss_pred             cccccceEEEeEE--EEEeeeehhhhHhh-----------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          444 KVNDKRKLLTVLA--GCLGSITFLCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      .+...++||+|+|  ||+|.... .||||                             |++++++. .++..++||||++
T Consensus         9 ~~~~~~~lG~G~fg~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~-~~~~~~lv~Ey~~   86 (276)
T d1uwha_           9 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCE   86 (276)
T ss_dssp             CCCCCSEEEECSSCEEEEEESSS-EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCC
T ss_pred             cEEEEEEEeeCCCcEEEEEEECC-EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEE-eccEEEEEEecCC
Confidence            3455678999998  99886543 47776                             88888876 4567899999999


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC-cee
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT-GIV  571 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~  571 (702)
                      +|+|.+++...+..+++.+++.++.||++||+|||++   +|+||||||+|||++.++.+||+|||+++....... ...
T Consensus        87 ~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~  163 (276)
T d1uwha_          87 GSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF  163 (276)
T ss_dssp             EEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC----------
T ss_pred             CCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccc
Confidence            9999999987776899999999999999999999999   999999999999999999999999999987644332 234


Q ss_pred             eceeccccccCcccccC---CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          572 AGVRGSRGYMAPEWQNS---GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       572 ~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                      ....||+.|+|||++.+   ..++.++|||||||++|||+||+.||......   .............+..     ...+
T Consensus       164 ~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~---~~~~~~~~~~~~~p~~-----~~~~  235 (276)
T d1uwha_         164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR---DQIIFMVGRGYLSPDL-----SKVR  235 (276)
T ss_dssp             --CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH---HHHHHHHHHTSCCCCG-----GGSC
T ss_pred             cccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChH---HHHHHHHhcCCCCCcc-----hhcc
Confidence            45679999999998864   35899999999999999999999999754211   1111111111111111     1233


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      ...++.+.+++.+||+.||++|||++||+++|+.+.
T Consensus       236 ~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~  271 (276)
T d1uwha_         236 SNCPKAMKRLMAECLKKKRDERPLFPQILASIELLA  271 (276)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            345678999999999999999999999999999865

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-40  Score=335.11  Aligned_cols=214  Identities=23%  Similarity=0.318  Sum_probs=177.8

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEe
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      .+...+.||+|+|  ||++....  ..||+|                              |+++++++++++..|+|||
T Consensus         7 dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmE   86 (263)
T d2j4za1           7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE   86 (263)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             HeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEe
Confidence            4555678999988  88887654  667777                              9999999999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      |+++|+|.+++.... .+++.++..++.||++||+|||++   +|+||||||+|||++.++.+||+|||+++......  
T Consensus        87 y~~~g~L~~~l~~~~-~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~--  160 (263)
T d2j4za1          87 YAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--  160 (263)
T ss_dssp             CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCC--
T ss_pred             ecCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeecCCCc--
Confidence            999999999998655 799999999999999999999999   99999999999999999999999999998654332  


Q ss_pred             eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCH
Q 038002          570 IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK  649 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (702)
                       .....||+.|+|||++.+..++.++|||||||++|||++|+.||....  . ..     ....+.....      ..+.
T Consensus       161 -~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--~-~~-----~~~~i~~~~~------~~p~  225 (263)
T d2j4za1         161 -RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--Y-QE-----TYKRISRVEF------TFPD  225 (263)
T ss_dssp             -CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS--H-HH-----HHHHHHTTCC------CCCT
T ss_pred             -ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCC--H-HH-----HHHHHHcCCC------CCCc
Confidence             334679999999999999999999999999999999999999996431  1 11     1111111111      1223


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          650 ITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..++.+.+++.+||+.||++|||++|+++
T Consensus       226 ~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         226 FVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            34567889999999999999999999986

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-39  Score=332.82  Aligned_cols=220  Identities=21%  Similarity=0.235  Sum_probs=180.4

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEec
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      .+++...++||+|+|  ||++....  ..||+|                           |+++++++++++..|+||||
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence            346777789999998  99988653  778887                           99999999999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      +++|+|.+++.+.  .+++.++..++.||+.||+|||++   ||+||||||+|||++.++.+||+|||+++.+..... .
T Consensus        99 ~~gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~-~  172 (293)
T d1yhwa1          99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K  172 (293)
T ss_dssp             CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred             cCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeeccccc-c
Confidence            9999999988754  599999999999999999999999   999999999999999999999999999997644332 3


Q ss_pred             eeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHH
Q 038002          571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI  650 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  650 (702)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ...    ......... ...   ..+..
T Consensus       173 ~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~---~~~----~~~~~~~~~-~~~---~~~~~  241 (293)
T d1yhwa1         173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP---LRA----LYLIATNGT-PEL---QNPEK  241 (293)
T ss_dssp             BCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHH----HHHHHHHCS-CCC---SSGGG
T ss_pred             ccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCH---HHH----HHHHHhCCC-CCC---CCccc
Confidence            3456799999999999999999999999999999999999999964311   111    111111111 111   12233


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          651 TLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       651 ~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .++.+.+++.+||+.||++|||++|+++
T Consensus       242 ~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         242 LSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            4667899999999999999999999986

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-39  Score=334.83  Aligned_cols=217  Identities=17%  Similarity=0.238  Sum_probs=176.9

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +.++..+.||+|+|  ||++....  ..||||                              |+++++++++++..|+||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            45667789999998  99988653  678887                              899999999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+++|+|.+++...+ .+++.++..++.|++.||+|||++   +|+||||||+|||+++++.+||+|||+|+.+.....
T Consensus        88 Ey~~gg~L~~~~~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~  163 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK  163 (288)
T ss_dssp             CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred             EccCCCCHHHhhhccC-CCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecccCCc
Confidence            9999999999987665 799999999999999999999999   999999999999999999999999999998754332


Q ss_pred             -ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          569 -GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       569 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                       .......||+.|+|||++.+..++.++|||||||++|||++|+.||....   ...     ....+.....      ..
T Consensus       164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~---~~~-----~~~~i~~~~~------~~  229 (288)
T d1uu3a_         164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN---EYL-----IFQKIIKLEY------DF  229 (288)
T ss_dssp             ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSS---HHH-----HHHHHHTTCC------CC
T ss_pred             ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcC---HHH-----HHHHHHcCCC------CC
Confidence             23345679999999999999999999999999999999999999997431   111     1111222211      12


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSMKNVI  677 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl  677 (702)
                      +...++.+.++|.+||+.||++|||++|++
T Consensus       230 p~~~s~~~~~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         230 PEKFFPKARDLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             CTTCCHHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred             CccCCHHHHHHHHHHccCCHhHCcCHHHHc
Confidence            233456789999999999999999999864

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.2e-40  Score=338.41  Aligned_cols=226  Identities=24%  Similarity=0.304  Sum_probs=185.4

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      .++..++||+|+|  ||++....  ..||||                          |+++++++.+++..++||||+++
T Consensus        18 ~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~   97 (287)
T d1opja_          18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY   97 (287)
T ss_dssp             GEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             HeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccC
Confidence            3444578899988  99998764  678888                          99999999999999999999999


Q ss_pred             CCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceee
Q 038002          494 GSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA  572 (702)
Q Consensus       494 gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  572 (702)
                      |+|.+++... ...+++..++.++.||++||+|||++   +|+||||||+|||++.++.+||+|||+++...........
T Consensus        98 g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~  174 (287)
T d1opja_          98 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA  174 (287)
T ss_dssp             CBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEET
T ss_pred             cchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecCCCCceeec
Confidence            9999999764 34689999999999999999999999   9999999999999999999999999999877655554555


Q ss_pred             ceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHH
Q 038002          573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL  652 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  652 (702)
                      ...|++.|+|||++.+..++.++|||||||++|||++|..|+......   ...    ......+ .    ....+...+
T Consensus       175 ~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~---~~~----~~~i~~~-~----~~~~~~~~~  242 (287)
T d1opja_         175 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQV----YELLEKD-Y----RMERPEGCP  242 (287)
T ss_dssp             TEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH---HHH----HHHHHTT-C----CCCCCTTCC
T ss_pred             cccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH---HHH----HHHHhcC-C----CCCCCccch
Confidence            667899999999999999999999999999999999987776433111   111    1111111 1    112233456


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          653 ERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       653 ~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      +++.+++.+||+.||++|||++||+++|+.+.
T Consensus       243 ~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         243 EKVYELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            68999999999999999999999999998764

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-39  Score=338.14  Aligned_cols=223  Identities=25%  Similarity=0.304  Sum_probs=180.0

Q ss_pred             cccccceEEEeEE--EEEeeeeh-------hhhHhh-----------------------------eeeEEEEEecCCeeE
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF-------LCFLIA-----------------------------ISSLLVYKHRSSKKL  485 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~-------~~~avk-----------------------------i~~l~~~~~~~~~~~  485 (702)
                      .++..+.||+|+|  ||++....       ..||+|                             |+++++.+.+.+..+
T Consensus        38 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~  117 (325)
T d1rjba_          38 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIY  117 (325)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEE
Confidence            3445678999988  88887543       246665                             999999999999999


Q ss_pred             EEEecCCCCCHHHHhhcCCC----------------------CCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCc
Q 038002          486 LVYEFMSKGSLADLLFNLET----------------------RPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRN  543 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~~~----------------------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~N  543 (702)
                      +||||+++|+|.++|.....                      .+++.+++.++.||++||+|||++   +|+||||||+|
T Consensus       118 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlKp~N  194 (325)
T d1rjba_         118 LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARN  194 (325)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGG
T ss_pred             EEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCchhc
Confidence            99999999999999976532                      378899999999999999999999   99999999999


Q ss_pred             EEEeCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCc
Q 038002          544 ILIDDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTA  621 (702)
Q Consensus       544 Ill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~  621 (702)
                      ||++.++.+||+|||+|+........ ......||+.|+|||++.+..++.++|||||||++|||++ |+.||.......
T Consensus       195 ill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~  274 (325)
T d1rjba_         195 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA  274 (325)
T ss_dssp             EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             cccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH
Confidence            99999999999999999876544432 3345778999999999999999999999999999999998 899997542211


Q ss_pred             chhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 038002          622 DEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLE  681 (702)
Q Consensus       622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le  681 (702)
                         .+...    ...+ .    ..+.+...++.+.+||.+||+.||++|||++||+++|.
T Consensus       275 ---~~~~~----~~~~-~----~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         275 ---NFYKL----IQNG-F----KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             ---HHHHH----HHTT-C----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             ---HHHHH----HhcC-C----CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence               11111    1111 1    11223344568999999999999999999999999995

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-39  Score=333.68  Aligned_cols=224  Identities=25%  Similarity=0.351  Sum_probs=180.1

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      +.++..++||+|+|  ||+|.... ..||||                          |+++++++. ++..++||||+++
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~~   91 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMEN   91 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTT
T ss_pred             HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeCCC
Confidence            34455678999998  99998765 678998                          889998775 4567999999999


Q ss_pred             CCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceee
Q 038002          494 GSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA  572 (702)
Q Consensus       494 gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  572 (702)
                      |+|.+++.... ..+++.+++.++.||++||+|||++   +|+||||||+|||+++++.+||+|||+++...........
T Consensus        92 g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~  168 (272)
T d1qpca_          92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE  168 (272)
T ss_dssp             CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred             CcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccCCcccccc
Confidence            99999886543 2589999999999999999999999   9999999999999999999999999999987655444445


Q ss_pred             ceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHH
Q 038002          573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL  652 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  652 (702)
                      ...||+.|+|||++.+..++.++|||||||++|||+||..|+.......   .    .......+.     ....+...+
T Consensus       169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~---~----~~~~i~~~~-----~~~~p~~~~  236 (272)
T d1qpca_         169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP---E----VIQNLERGY-----RMVRPDNCP  236 (272)
T ss_dssp             TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---H----HHHHHHTTC-----CCCCCTTCC
T ss_pred             ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH---H----HHHHHHhcC-----CCCCcccCh
Confidence            5678999999999998899999999999999999999766654331111   1    111111111     112223345


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          653 ERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       653 ~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      +.+.+++.+||+.||++|||++||+++|+.
T Consensus       237 ~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~  266 (272)
T d1qpca_         237 EELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (272)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHhhh
Confidence            678999999999999999999999999985

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.6e-39  Score=337.31  Aligned_cols=225  Identities=23%  Similarity=0.309  Sum_probs=172.9

Q ss_pred             ccccceEEEeEE--EEEeeeeh-----hhhHhh----------------------------eeeEEEEEecCCeeEEEEe
Q 038002          445 VNDKRKLLTVLA--GCLGSITF-----LCFLIA----------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~-----~~~avk----------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      ++..+.||+|+|  ||+|....     ..||||                            |+++++++.+++..++|||
T Consensus        28 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~E  107 (299)
T d1jpaa_          28 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITE  107 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence            445678999998  99987643     246666                            9999999999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      |+++|+|.+++......+++.+++.++.||++||+|||++   +|+||||||+|||++.++.+||+|||+++.+......
T Consensus       108 y~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~  184 (299)
T d1jpaa_         108 FMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD  184 (299)
T ss_dssp             CCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred             ecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEECCCCcEEECCcccceEccCCCCc
Confidence            9999999999988776799999999999999999999999   9999999999999999999999999999876543321


Q ss_pred             e----eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          570 I----VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       570 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      .    .....||+.|+|||.+.+..++.++|||||||++|||+| |+.||....  .  ..+.    ..+..+.     .
T Consensus       185 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~--~--~~~~----~~i~~~~-----~  251 (299)
T d1jpaa_         185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT--N--QDVI----NAIEQDY-----R  251 (299)
T ss_dssp             -----------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--H--HHHH----HHHHTTC-----C
T ss_pred             ceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCC--H--HHHH----HHHHcCC-----C
Confidence            1    123457899999999999999999999999999999998 899996431  1  1111    1111111     1


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ...+...++.+.+++.+||+.||++|||++||++.|+.+.+
T Consensus       252 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         252 LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            12233456678999999999999999999999999988643

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-39  Score=340.52  Aligned_cols=230  Identities=22%  Similarity=0.275  Sum_probs=177.2

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCCeeEEEEe
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      .+.++..++||+|+|  ||++....  ..||+|                            |++++++++++++.|+|||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            456777789999998  99988653  678877                            8999999999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      |+++|+|.+++.+.+ .+++.++..++.||+.||+|||+ +   +|+||||||+|||++.++.+||+|||+|+...... 
T Consensus        85 y~~gg~L~~~l~~~~-~l~~~~~~~~~~qil~aL~yLH~~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-  159 (322)
T d1s9ja_          85 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-  159 (322)
T ss_dssp             CCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHT-
T ss_pred             cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHhC---CEEccccCHHHeeECCCCCEEEeeCCCccccCCCc-
Confidence            999999999998655 79999999999999999999996 6   89999999999999999999999999998653222 


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhh-------------
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFV-------------  635 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~-------------  635 (702)
                        .....||+.|+|||++.+..++.++||||+||++|||++|+.||........+............             
T Consensus       160 --~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (322)
T d1s9ja_         160 --ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL  237 (322)
T ss_dssp             --C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------------
T ss_pred             --cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccc
Confidence              23467999999999999999999999999999999999999999764322111110000000000             


Q ss_pred             ---------cccccccc-------ccc-cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          636 ---------AGEFNKLV-------EEE-VDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       636 ---------~~~~~~~~-------~~~-~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                               ........       .+. .....+.++.+++.+||+.||++|||++|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~  297 (322)
T d1s9ja_         238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  297 (322)
T ss_dssp             --------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence                     00000000       000 01123467889999999999999999999987

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-39  Score=330.97  Aligned_cols=221  Identities=20%  Similarity=0.161  Sum_probs=178.1

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      +.++..++||+|+|  ||++....  ..||+|                           |+++++++.+++..++||||+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            44566788999988  99988654  678887                           999999999999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCcee
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIV  571 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~  571 (702)
                      ++|+|.+++.+....+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||++....... ...
T Consensus        92 ~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~-~~~  167 (288)
T d2jfla1          92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRR  167 (288)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHH-HHH
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccCCCc-ccc
Confidence            99999999877665799999999999999999999999   99999999999999999999999999997643211 122


Q ss_pred             eceeccccccCccccc-----CCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          572 AGVRGSRGYMAPEWQN-----SGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       572 ~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                      ....||+.|+|||++.     ...++.++|||||||++|||++|+.||.....  .+ .+.     ..........   .
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~--~~-~~~-----~i~~~~~~~~---~  236 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP--MR-VLL-----KIAKSEPPTL---A  236 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCG--GG-HHH-----HHHHSCCCCC---S
T ss_pred             cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCH--HH-HHH-----HHHcCCCCCC---C
Confidence            3467999999999873     45688999999999999999999999965421  11 111     1111111111   1


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .+...++.+.+++.+||+.||++|||++|+++
T Consensus       237 ~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         237 QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             SGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            12344668899999999999999999999986

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-39  Score=330.87  Aligned_cols=222  Identities=18%  Similarity=0.199  Sum_probs=165.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEe--cCCeeEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKH--RSSKKLLV  487 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~--~~~~~~lV  487 (702)
                      +.++..+.||+|+|  ||++....  ..||+|                             |+++++++.  .++..|+|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            45666789999998  99887654  678887                             888988774  45678999


Q ss_pred             EecCCCCCHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHhhhhcC--CCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          488 YEFMSKGSLADLLFNL---ETRPLWRDRVRIALDVARGLLYLHDEC--EVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~--~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      |||+++|+|.+++.+.   ...+++.+++.++.||+.||+|||++.  ..+|+||||||+|||++.++.+||+|||+++.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            9999999999998642   346999999999999999999999971  01399999999999999999999999999987


Q ss_pred             cCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccc
Q 038002          563 LMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKL  642 (702)
Q Consensus       563 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  642 (702)
                      +..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....  . . .    ....+..+...  
T Consensus       164 ~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~--~-~-~----~~~~i~~~~~~--  232 (269)
T d2java1         164 LNHDTS-FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--Q-K-E----LAGKIREGKFR--  232 (269)
T ss_dssp             C------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--H-H-H----HHHHHHHTCCC--
T ss_pred             cccCCC-ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCC--H-H-H----HHHHHHcCCCC--
Confidence            643322 2345679999999999999999999999999999999999999996431  1 1 1    11122222221  


Q ss_pred             cccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          643 VEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       643 ~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                         ..+...++++.+++.+||+.||++|||++|+++
T Consensus       233 ---~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         233 ---RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             ---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---CCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence               123344668899999999999999999999975

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-39  Score=325.26  Aligned_cols=222  Identities=21%  Similarity=0.294  Sum_probs=185.4

Q ss_pred             cccceEEEeEE--EEEeeeeh-hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCCCCH
Q 038002          446 NDKRKLLTVLA--GCLGSITF-LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSKGSL  496 (702)
Q Consensus       446 ~~~~~l~~g~~--v~~~~~~~-~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~gsL  496 (702)
                      +..++||+|+|  ||+|.... ..||||                          |+++++++.+++..++||||+++|+|
T Consensus         7 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l   86 (258)
T d1k2pa_           7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL   86 (258)
T ss_dssp             CCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEH
T ss_pred             EEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcH
Confidence            44578999988  99999765 578888                          99999999999999999999999999


Q ss_pred             HHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeeceec
Q 038002          497 ADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVRG  576 (702)
Q Consensus       497 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g  576 (702)
                      .+++......+++..+..++.||++||+|||++   +|+||||||+||+++.++.+||+|||+++..............|
T Consensus        87 ~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~  163 (258)
T d1k2pa_          87 LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF  163 (258)
T ss_dssp             HHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCC
T ss_pred             HHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCC
Confidence            999888777899999999999999999999999   99999999999999999999999999998765554444455678


Q ss_pred             cccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHHH
Q 038002          577 SRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERM  655 (702)
Q Consensus       577 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  655 (702)
                      |+.|+|||.+.+..++.++||||||+++|||+| |+.||....  ..+      ....+..+..     ...+...++.+
T Consensus       164 t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~--~~~------~~~~i~~~~~-----~~~p~~~~~~l  230 (258)
T d1k2pa_         164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT--NSE------TAEHIAQGLR-----LYRPHLASEKV  230 (258)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC--HHH------HHHHHHTTCC-----CCCCTTCCHHH
T ss_pred             CCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCC--HHH------HHHHHHhCCC-----CCCcccccHHH
Confidence            999999999999999999999999999999998 899996542  111      1111122111     11223345688


Q ss_pred             HHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          656 VKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       656 ~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      .+++.+||+.||++|||++||++.|..+
T Consensus       231 ~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         231 YTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             HHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            9999999999999999999999998653

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-39  Score=329.36  Aligned_cols=234  Identities=24%  Similarity=0.298  Sum_probs=180.1

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMSK  493 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~~  493 (702)
                      +.++..++||+|+|  ||+|.... ..||||                          |+++++++.+ +..++||||+++
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~~   95 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK   95 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecCC
Confidence            45666788999998  99998766 568888                          9999998854 568999999999


Q ss_pred             CCHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceee
Q 038002          494 GSLADLLFNL-ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA  572 (702)
Q Consensus       494 gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  572 (702)
                      |+|.+++... ...+++.+++.++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++...........
T Consensus        96 g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  172 (285)
T d1fmka3          96 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ  172 (285)
T ss_dssp             CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred             CchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccCCCceeec
Confidence            9999998754 23589999999999999999999999   9999999999999999999999999999876544444445


Q ss_pred             ceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHH
Q 038002          573 GVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL  652 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  652 (702)
                      ...||+.|+|||++....++.++||||||+++|||++|..|+.......  ..     ...+..+.     ..+.+...+
T Consensus       173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~--~~-----~~~i~~~~-----~~~~~~~~~  240 (285)
T d1fmka3         173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EV-----LDQVERGY-----RMPCPPECP  240 (285)
T ss_dssp             ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HH-----HHHHHTTC-----CCCCCTTSC
T ss_pred             cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHH--HH-----HHHHHhcC-----CCCCCcccC
Confidence            5678999999999999999999999999999999999777765432111  11     11111111     112333445


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCCCCCCCC
Q 038002          653 ERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEIPILAFP  692 (702)
Q Consensus       653 ~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~~~p~~P  692 (702)
                      +++.++|.+||+.||++||++++|+++|+....-..|+.+
T Consensus       241 ~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p~~~  280 (285)
T d1fmka3         241 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQ  280 (285)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCC
T ss_pred             HHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCCCCC
Confidence            6889999999999999999999999999997655444433

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-39  Score=330.27  Aligned_cols=227  Identities=22%  Similarity=0.306  Sum_probs=177.4

Q ss_pred             ccccceEEEeEE--EEEeeeeh------hhhHhh----------------------------eeeEEEEEecCCeeEEEE
Q 038002          445 VNDKRKLLTVLA--GCLGSITF------LCFLIA----------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~------~~~avk----------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +...+.||+|+|  ||+|....      ..||||                            |+++++++.+++..++||
T Consensus         9 ~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~   88 (283)
T d1mqba_           9 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT   88 (283)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             eEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEE
Confidence            456678999998  99887653      357777                            999999999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+.+++|.+++......+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.......
T Consensus        89 e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~  165 (283)
T d1mqba_          89 EYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  165 (283)
T ss_dssp             ECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred             EecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhcccCCCc
Confidence            99999999999988777899999999999999999999999   999999999999999999999999999987644332


Q ss_pred             c--eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          569 G--IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       569 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                      .  ......||+.|+|||++.+..++.++|||||||++|||+++..|+...... .+      ....+..+.     ...
T Consensus       166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~-~~------~~~~i~~~~-----~~~  233 (283)
T d1mqba_         166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-HE------VMKAINDGF-----RLP  233 (283)
T ss_dssp             --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HH------HHHHHHTTC-----CCC
T ss_pred             cceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH-HH------HHHHHhccC-----CCC
Confidence            1  223456899999999999999999999999999999999977666443211 11      111111111     112


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcCC
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTMEI  686 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~~  686 (702)
                      .+...+..+.+++.+||+.||++|||++||+++|+.+.+.
T Consensus       234 ~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         234 TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             CchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence            2334557789999999999999999999999999986653

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.7e-39  Score=334.12  Aligned_cols=221  Identities=22%  Similarity=0.273  Sum_probs=165.8

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      +.++..+.||+|+|  ||++....  ..||||                            |+++++++++++..||||||
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~   88 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQL   88 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            44555667788877  77776543  567776                            89999999999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe---CCCcEEEecccceeecCCCC
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID---DSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      ++||+|.+++...+ .+++.++..++.||+.||+|||++   +|+||||||+||++.   +++.+||+|||+++......
T Consensus        89 ~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~  164 (307)
T d1a06a_          89 VSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS  164 (307)
T ss_dssp             CCSCBHHHHHHTCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC----------
T ss_pred             cCCCcHHHhhhccc-CCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEEccCCC
Confidence            99999999997654 799999999999999999999999   999999999999994   57899999999998654332


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                        ......||+.|+|||++.+..++.++|||||||++|||++|+.||....    ...    ....+......  .....
T Consensus       165 --~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~----~~~----~~~~i~~~~~~--~~~~~  232 (307)
T d1a06a_         165 --VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN----DAK----LFEQILKAEYE--FDSPY  232 (307)
T ss_dssp             ----------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHH----HHHHHHTTCCC--CCTTT
T ss_pred             --eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCC----HHH----HHHHHhccCCC--CCCcc
Confidence              2345679999999999999999999999999999999999999996431    111    11111121111  11122


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ....++.+.+++.+||+.||++|||++|+++.
T Consensus       233 ~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         233 WDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             TTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             ccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            23456788999999999999999999999983

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-38  Score=327.60  Aligned_cols=217  Identities=24%  Similarity=0.266  Sum_probs=174.7

Q ss_pred             cceEEEeEE--EEEeeeeh----hhhHhh-----------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          448 KRKLLTVLA--GCLGSITF----LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       448 ~~~l~~g~~--v~~~~~~~----~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      .++||+|+|  ||+|....    ..||||                             |++++++++++ ..+|||||++
T Consensus        12 ~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lvmE~~~   90 (277)
T d1xbba_          12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAE   90 (277)
T ss_dssp             EEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEEEECCT
T ss_pred             CCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEEEEcCC
Confidence            467999988  88887543    467777                             88899888654 5789999999


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce--
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI--  570 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~--  570 (702)
                      +|+|.+++.... .+++.+++.++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.+.......  
T Consensus        91 ~g~L~~~l~~~~-~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~  166 (277)
T d1xbba_          91 LGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA  166 (277)
T ss_dssp             TEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC
T ss_pred             CCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhcccccccccc
Confidence            999999998765 799999999999999999999999   99999999999999999999999999999875444322  


Q ss_pred             eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCH
Q 038002          571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK  649 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (702)
                      .....||+.|+|||.+.+..++.++|||||||++|||++ |+.||....  ..  .    ....+..+..     ...+.
T Consensus       167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~--~~--~----~~~~i~~~~~-----~~~p~  233 (277)
T d1xbba_         167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--GS--E----VTAMLEKGER-----MGCPA  233 (277)
T ss_dssp             ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC--HH--H----HHHHHHTTCC-----CCCCT
T ss_pred             ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCC--HH--H----HHHHHHcCCC-----CCCCc
Confidence            234568999999999999999999999999999999998 899997431  11  1    1111222211     12233


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhC
Q 038002          650 ITLERMVKTGLLCIQDEPNLRPSMKNVILMLEG  682 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~  682 (702)
                      ..++.+.+++.+||+.||++|||+++|+++|+.
T Consensus       234 ~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         234 GCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence            445688899999999999999999999998875

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-38  Score=322.11  Aligned_cols=213  Identities=24%  Similarity=0.289  Sum_probs=168.6

Q ss_pred             ccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEec----CCeeEEEEe
Q 038002          447 DKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHR----SSKKLLVYE  489 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~----~~~~~lV~e  489 (702)
                      -.++||+|+|  ||++....  ..||+|                             |+++++++++    +...|+|||
T Consensus        13 ~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE   92 (270)
T d1t4ha_          13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE   92 (270)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred             eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEe
Confidence            3457999988  89887654  567776                             8889887754    567899999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCC--eEecCCCCCcEEEe-CCCcEEEecccceeecCCC
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQ--IIHCDIKLRNILID-DSWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivH~dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~  566 (702)
                      |+++|+|.+++.+.. .+++.++..++.||++||+|||++   +  |+||||||+|||++ +++.+||+|||+++.....
T Consensus        93 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~gl~yLH~~---~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~  168 (270)
T d1t4ha_          93 LMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS  168 (270)
T ss_dssp             CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred             CCCCCcHHHHHhccc-cccHHHHHHHHHHHHHHHHHHHHC---CCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCC
Confidence            999999999997654 789999999999999999999998   7  99999999999996 5789999999999864332


Q ss_pred             CCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          567 QTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       567 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                         ......||+.|+|||++.+ .++.++|||||||++|||++|+.||......   ..    .......+..+...   
T Consensus       169 ---~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~---~~----~~~~i~~~~~~~~~---  234 (270)
T d1t4ha_         169 ---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA---AQ----IYRRVTSGVKPASF---  234 (270)
T ss_dssp             ---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH---HH----HHHHHTTTCCCGGG---
T ss_pred             ---ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccH---HH----HHHHHHcCCCCccc---
Confidence               2345679999999998865 5899999999999999999999999643111   11    11222222211112   


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       +...++++.+++.+||+.||++|||++|+++
T Consensus       235 -~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         235 -DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             -GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -CccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence             2223456889999999999999999999986

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-38  Score=328.50  Aligned_cols=217  Identities=23%  Similarity=0.253  Sum_probs=176.3

Q ss_pred             eEEEeEE--EEEeeeeh----hhhHhh----------------------------eeeEEEEEecCCeeEEEEecCCCCC
Q 038002          450 KLLTVLA--GCLGSITF----LCFLIA----------------------------ISSLLVYKHRSSKKLLVYEFMSKGS  495 (702)
Q Consensus       450 ~l~~g~~--v~~~~~~~----~~~avk----------------------------i~~l~~~~~~~~~~~lV~e~~~~gs  495 (702)
                      +||+|+|  ||+|....    ..||||                            |++++++++. +..||||||+++|+
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~   94 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP   94 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEE
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCc
Confidence            5899987  88886543    357777                            8899988865 46899999999999


Q ss_pred             HHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce--eec
Q 038002          496 LADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI--VAG  573 (702)
Q Consensus       496 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~--~~~  573 (702)
                      |.+++...+..+++.++..++.||++||+|||++   +|+||||||+|||++.++.+||+|||+++.+.......  ...
T Consensus        95 L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~  171 (285)
T d1u59a_          95 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA  171 (285)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCS
T ss_pred             HHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhcccccccccccccc
Confidence            9999887766899999999999999999999999   99999999999999999999999999999875543322  234


Q ss_pred             eeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHH
Q 038002          574 VRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITL  652 (702)
Q Consensus       574 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  652 (702)
                      ..||+.|+|||++.+..++.++|||||||++|||+| |+.||.....  .+      ....+..+..     .+.+...+
T Consensus       172 ~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~--~~------~~~~i~~~~~-----~~~p~~~~  238 (285)
T d1u59a_         172 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PE------VMAFIEQGKR-----MECPPECP  238 (285)
T ss_dssp             SCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HH------HHHHHHTTCC-----CCCCTTCC
T ss_pred             cccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCH--HH------HHHHHHcCCC-----CCCCCcCC
Confidence            568999999999998999999999999999999998 9999975421  11      1111222221     12233455


Q ss_pred             HHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          653 ERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       653 ~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      +.+.+++.+||+.||++|||+.+|++.|+..
T Consensus       239 ~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~  269 (285)
T d1u59a_         239 PELYALMSDCWIYKWEDRPDFLTVEQRMRAC  269 (285)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            7889999999999999999999999999753

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.7e-38  Score=334.72  Aligned_cols=221  Identities=21%  Similarity=0.245  Sum_probs=180.6

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      .+...+.||+|+|  ||++....  ..||||                           |+++++++++++..||||||++
T Consensus        27 ~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~  106 (350)
T d1koaa2          27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS  106 (350)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            4556788999998  99988653  678888                           8999999999999999999999


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe--CCCcEEEecccceeecCCCCCce
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID--DSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~--~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      ||+|.+++.+....+++.++..++.||+.||+|||++   +|+||||||+|||++  .++.+||+|||+++.+.....  
T Consensus       107 gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~--  181 (350)
T d1koaa2         107 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS--  181 (350)
T ss_dssp             SCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSC--
T ss_pred             CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchheecccccc--
Confidence            9999999977666799999999999999999999999   999999999999995  467899999999998654332  


Q ss_pred             eeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHH
Q 038002          571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI  650 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  650 (702)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||....  . ...+     ..+......  ........
T Consensus       182 ~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--~-~~~~-----~~i~~~~~~--~~~~~~~~  251 (350)
T d1koaa2         182 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN--D-DETL-----RNVKSCDWN--MDDSAFSG  251 (350)
T ss_dssp             EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--H-HHHH-----HHHHHTCCC--SCCGGGGG
T ss_pred             cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCC--H-HHHH-----HHHHhCCCC--CCcccccC
Confidence            345679999999999999999999999999999999999999996431  1 1111     111111110  11112233


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          651 TLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       651 ~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .++.+.++|.+||+.||++|||++|+++.
T Consensus       252 ~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         252 ISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             CCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            45678999999999999999999999884

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.1e-38  Score=334.52  Aligned_cols=222  Identities=21%  Similarity=0.225  Sum_probs=183.1

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------eeeEEEEEecCCeeEEEEecC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------ISSLLVYKHRSSKKLLVYEFM  491 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------i~~l~~~~~~~~~~~lV~e~~  491 (702)
                      +.++..+.||+|+|  ||++....  ..||||                           |+++++++++++..||||||+
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            45677789999998  99988653  778888                           999999999999999999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe--CCCcEEEecccceeecCCCCCc
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID--DSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~--~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      +||+|.+++.....++++.+++.++.||+.||+|||++   ||+||||||+|||++  .++.+||+|||+|..+....  
T Consensus       109 ~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~--  183 (352)
T d1koba_         109 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--  183 (352)
T ss_dssp             CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS--
T ss_pred             CCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecCCCC--
Confidence            99999999887776799999999999999999999999   999999999999997  67899999999999875433  


Q ss_pred             eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCH
Q 038002          570 IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK  649 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (702)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||....   ....     ...+......  .......
T Consensus       184 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~---~~~~-----~~~i~~~~~~--~~~~~~~  253 (352)
T d1koba_         184 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED---DLET-----LQNVKRCDWE--FDEDAFS  253 (352)
T ss_dssp             CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS---HHHH-----HHHHHHCCCC--CCSSTTT
T ss_pred             ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---HHHH-----HHHHHhCCCC--CCccccc
Confidence            2445679999999999999999999999999999999999999996431   1111     1111111111  1112233


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          650 ITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ..+..+.+||.+||+.||++|||++|+++.
T Consensus       254 ~~s~~~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         254 SVSPEAKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            456788999999999999999999999873

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-37  Score=327.48  Aligned_cols=216  Identities=20%  Similarity=0.241  Sum_probs=178.7

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEe
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      .++..+.||+|+|  ||++....  ..||+|                              |++++..+++++..|+|||
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~e   85 (337)
T d1o6la_           6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME   85 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccccccccee
Confidence            4566788999988  88887643  677777                              9999999999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      |++||+|.+++...+ .+++.+++.++.||+.||+|||++   +|+||||||+|||++.+|.+||+|||+|+...... .
T Consensus        86 y~~gg~L~~~~~~~~-~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~-~  160 (337)
T d1o6la_          86 YANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-A  160 (337)
T ss_dssp             CCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-C
T ss_pred             ccCCCchhhhhhccc-CCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccccccccCC-c
Confidence            999999999998765 789999999999999999999999   99999999999999999999999999998654322 2


Q ss_pred             eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCH
Q 038002          570 IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK  649 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (702)
                      .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..     ..........      ..+.
T Consensus       161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~---~~-----~~~~i~~~~~------~~p~  226 (337)
T d1o6la_         161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ER-----LFELILMEEI------RFPR  226 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH---HH-----HHHHHHHCCC------CCCT
T ss_pred             ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH---HH-----HHHHHhcCCC------CCCc
Confidence            34557899999999999999999999999999999999999999975421   11     1111122211      1233


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 038002          650 ITLERMVKTGLLCIQDEPNLRPS-----MKNVIL  678 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RPt-----~~evl~  678 (702)
                      ..+.++.+||.+||+.||++||+     ++|+++
T Consensus       227 ~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         227 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             cCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            45667899999999999999995     788876

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2e-37  Score=329.99  Aligned_cols=217  Identities=20%  Similarity=0.161  Sum_probs=175.6

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------------eeeEEEEEecCCeeEE
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------------ISSLLVYKHRSSKKLL  486 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------------i~~l~~~~~~~~~~~l  486 (702)
                      .++..+.||+|+|  ||++....  ..||||                                 |++++.++++++..|+
T Consensus         5 dy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~i   84 (364)
T d1omwa3           5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF   84 (364)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEE
T ss_pred             hCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEE
Confidence            3556678999998  88887653  667776                                 7888899999999999


Q ss_pred             EEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCC
Q 038002          487 VYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  566 (702)
                      ||||+++|+|.++|.+.. .+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+|+.+...
T Consensus        85 vmE~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~  160 (364)
T d1omwa3          85 ILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  160 (364)
T ss_dssp             EECCCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCEECSSS
T ss_pred             EEEecCCCcHHHHHHhcc-cccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceeeecCCC
Confidence            999999999999997754 788999999999999999999999   9999999999999999999999999999976543


Q ss_pred             CCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccc
Q 038002          567 QTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE  645 (702)
Q Consensus       567 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  645 (702)
                      .   .....||+.|+|||++.. ..++.++|||||||++|||++|+.||........ ..    ........      ..
T Consensus       161 ~---~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~----~~~~~~~~------~~  226 (364)
T d1omwa3         161 K---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HE----IDRMTLTM------AV  226 (364)
T ss_dssp             C---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCH-HH----HHHHSSSC------CC
T ss_pred             c---ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHH-HH----HHHhcccC------CC
Confidence            3   234579999999998864 5789999999999999999999999975422211 11    11111111      11


Q ss_pred             ccCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 038002          646 EVDKITLERMVKTGLLCIQDEPNLRPS-----MKNVIL  678 (702)
Q Consensus       646 ~~~~~~~~~l~~li~~cL~~dP~~RPt-----~~evl~  678 (702)
                      ..+...++.+.++|.+||+.||++|||     ++|+++
T Consensus       227 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         227 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             CCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             CCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            122334567899999999999999999     688875

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.1e-38  Score=328.61  Aligned_cols=214  Identities=21%  Similarity=0.210  Sum_probs=174.2

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEe
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      .+...++||+|+|  ||++....  ..||||                              |+++++++.+++..|+|||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            4666788999998  99987654  678887                              8999999999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      ||++|+|..++.... .+++.+++.++.||+.||+|||++   +|+||||||+|||++.++.+||+|||++.....    
T Consensus        96 ~~~~g~l~~~~~~~~-~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~----  167 (309)
T d1u5ra_          96 YCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----  167 (309)
T ss_dssp             CCSEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS----
T ss_pred             ecCCCchHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCC----
Confidence            999999987766544 799999999999999999999999   999999999999999999999999999986532    


Q ss_pred             eeeceeccccccCcccccC---CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          570 IVAGVRGSRGYMAPEWQNS---GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                       .....||+.|+|||++.+   ..++.++|||||||++|||++|+.||.....  .+      ..............   
T Consensus       168 -~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~--~~------~~~~i~~~~~~~~~---  235 (309)
T d1u5ra_         168 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MS------ALYHIAQNESPALQ---  235 (309)
T ss_dssp             -BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HH------HHHHHHHSCCCCCS---
T ss_pred             -CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH--HH------HHHHHHhCCCCCCC---
Confidence             234569999999998853   4689999999999999999999999964311  11      11111122221111   


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       +...++.+.+++.+||+.||++|||++|+++
T Consensus       236 -~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         236 -SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             -CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             -CCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence             2234567899999999999999999999986

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-38  Score=327.58  Aligned_cols=227  Identities=25%  Similarity=0.303  Sum_probs=170.8

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-------hhhHhh-----------------------------eeeEEEEE-ecCCe
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-------LCFLIA-----------------------------ISSLLVYK-HRSSK  483 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-------~~~avk-----------------------------i~~l~~~~-~~~~~  483 (702)
                      +.++..++||+|+|  ||+|....       ..||||                             |+.++..+ ..++.
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~   92 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   92 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCe
Confidence            44556688999998  88887542       356776                             56666554 45667


Q ss_pred             eEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC
Q 038002          484 KLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD  548 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  548 (702)
                      .++||||+++|+|.++|....               ..+++.+++.++.||++||+|||++   +|+||||||+|||+++
T Consensus        93 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NILl~~  169 (299)
T d1ywna1          93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSE  169 (299)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECG
T ss_pred             EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCccceeECC
Confidence            999999999999999997532               2478999999999999999999999   9999999999999999


Q ss_pred             CCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCC-cCCcCCCCCcchhhh
Q 038002          549 SWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCR-SNFEVNVSTADEVLL  626 (702)
Q Consensus       549 ~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~-~Pf~~~~~~~~~~~~  626 (702)
                      ++.+||+|||+|+........ ......||+.|+|||++.+..++.++|||||||++|||++|. .||...... +.  +
T Consensus       170 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~-~~--~  246 (299)
T d1ywna1         170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EE--F  246 (299)
T ss_dssp             GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-HH--H
T ss_pred             CCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH-HH--H
Confidence            999999999999876444332 234567999999999999999999999999999999999975 567543211 11  1


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .    .....+..     ...+...++++.+++.+||+.||++|||++||+++|+.+.
T Consensus       247 ~----~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il  295 (299)
T d1ywna1         247 C----RRLKEGTR-----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  295 (299)
T ss_dssp             H----HHHHHTCC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             H----HHHhcCCC-----CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            1    11111111     1222334567899999999999999999999999998754

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-38  Score=323.44  Aligned_cols=221  Identities=22%  Similarity=0.256  Sum_probs=178.2

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh---------------------------------eeeEEEEEecCCee
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA---------------------------------ISSLLVYKHRSSKK  484 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk---------------------------------i~~l~~~~~~~~~~  484 (702)
                      .+.++..+.||+|+|  ||++....  ..||||                                 |+++++++++++..
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            345666788999988  88887653  667776                                 88999999999999


Q ss_pred             EEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC----cEEEecccce
Q 038002          485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW----RAKISDFGLA  560 (702)
Q Consensus       485 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~----~~kl~Dfg~a  560 (702)
                      ||||||+++|+|.+++...+ .+++.+++.++.||+.||+|||++   +|+||||||+||+++.++    .+||+|||++
T Consensus        89 ~iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a  164 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  164 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEEEcCCCccccchhcccc-ccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecchhhh
Confidence            99999999999999997755 799999999999999999999999   999999999999998776    5999999999


Q ss_pred             eecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccc
Q 038002          561 KLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFN  640 (702)
Q Consensus       561 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  640 (702)
                      .......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||....  . ...     ...+......
T Consensus       165 ~~~~~~~--~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~--~-~~~-----~~~i~~~~~~  234 (293)
T d1jksa_         165 HKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--K-QET-----LANVSAVNYE  234 (293)
T ss_dssp             EECTTSC--BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--H-HHH-----HHHHHTTCCC
T ss_pred             hhcCCCc--cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCC--H-HHH-----HHHHHhcCCC
Confidence            8764333  2344578999999999999999999999999999999999999997431  1 111     1111111110


Q ss_pred             cccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          641 KLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       641 ~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                        .........+..+.+++.+||+.||++|||++|+++
T Consensus       235 --~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         235 --FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             --CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --CCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              011112234567889999999999999999999987

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-38  Score=322.41  Aligned_cols=225  Identities=21%  Similarity=0.243  Sum_probs=170.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-----hhhHhh----------------------------eeeEEEEEecCCeeEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-----LCFLIA----------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-----~~~avk----------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      +.++..+.||+|+|  ||+|....     ..||||                            |+++++++. ++..++|
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv   85 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII   85 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEE
Confidence            45666788999998  88887542     345665                            999999885 5778999


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |||+++|+|.+++......+++.+++.++.||++||+|||++   +|+||||||+||+++.++.+||+|||+++......
T Consensus        86 ~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~  162 (273)
T d1mp8a_          86 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  162 (273)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred             EEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhheeccCCc
Confidence            999999999999887776799999999999999999999999   99999999999999999999999999998765544


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEE  646 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  646 (702)
                      ........||+.|+|||.+.+..++.++|||||||++|||++ |..||......  +      ....+..+...     .
T Consensus       163 ~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~--~------~~~~i~~~~~~-----~  229 (273)
T d1mp8a_         163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--D------VIGRIENGERL-----P  229 (273)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--G------HHHHHHTTCCC-----C
T ss_pred             ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH--H------HHHHHHcCCCC-----C
Confidence            444455678999999999999999999999999999999998 89999654211  1      11111222111     2


Q ss_pred             cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          647 VDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       647 ~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .+...++.+.++|.+||+.||++|||++||++.|+.+.
T Consensus       230 ~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~  267 (273)
T d1mp8a_         230 MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  267 (273)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            23345678999999999999999999999999998753

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-37  Score=326.44  Aligned_cols=225  Identities=19%  Similarity=0.179  Sum_probs=175.7

Q ss_pred             ccccc-ceEEEeEE--EEEeeeeh--hhhHhh-----------------------eeeEEEEEec----CCeeEEEEecC
Q 038002          444 KVNDK-RKLLTVLA--GCLGSITF--LCFLIA-----------------------ISSLLVYKHR----SSKKLLVYEFM  491 (702)
Q Consensus       444 ~~~~~-~~l~~g~~--v~~~~~~~--~~~avk-----------------------i~~l~~~~~~----~~~~~lV~e~~  491 (702)
                      .++.. +.||+|+|  ||++....  ..||||                       |+++++++++    +...|+|||||
T Consensus        12 ~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~   91 (335)
T d2ozaa1          12 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL   91 (335)
T ss_dssp             TEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred             CEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCcHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECC
Confidence            44443 45899998  99988654  778888                       8888887765    67899999999


Q ss_pred             CCCCHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC---CCcEEEecccceeecCCCC
Q 038002          492 SKGSLADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD---SWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       492 ~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~~  567 (702)
                      +||+|.++|.+.. ..+++.++..++.||+.||+|||++   +|+||||||+|||++.   .+.+||+|||+++......
T Consensus        92 ~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~  168 (335)
T d2ozaa1          92 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN  168 (335)
T ss_dssp             CSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCC
T ss_pred             CCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccccccceeeeccCCC
Confidence            9999999998753 4689999999999999999999999   9999999999999975   5679999999998765433


Q ss_pred             CceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccccccc
Q 038002          568 TGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEV  647 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  647 (702)
                      .  .....||+.|+|||++.+..++.++|||||||++|+|++|+.||..........    ............  .....
T Consensus       169 ~--~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~----~~~~~i~~~~~~--~~~~~  240 (335)
T d2ozaa1         169 S--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP----GMKTRIRMGQYE--FPNPE  240 (335)
T ss_dssp             C--CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC------------CCCSCSSS--CCTTH
T ss_pred             c--cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHH----HHHHHHhcCCCC--CCCcc
Confidence            2  345679999999999999999999999999999999999999997542221110    011111111110  01111


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          648 DKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       648 ~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ....++++.+|+.+||+.||++|||++|+++.
T Consensus       241 ~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         241 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             HHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            23456789999999999999999999999883

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=2.8e-37  Score=316.47  Aligned_cols=221  Identities=20%  Similarity=0.240  Sum_probs=176.5

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------------------eeeEEEEEec
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------------------ISSLLVYKHR  480 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------------------i~~l~~~~~~  480 (702)
                      .+++...+.||+|++  ||++....  ..+|||                                     |+++++.+++
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            356667788888887  88776543  566665                                     7888899999


Q ss_pred             CCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccce
Q 038002          481 SSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLA  560 (702)
Q Consensus       481 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a  560 (702)
                      ++..||||||+++|+|.++|.... .+++.++..++.||++||+|||++   +|+||||||+|||++.++.+||+|||++
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a  157 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFS  157 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             CcceEEEEEcCCCchHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchhe
Confidence            999999999999999999998755 799999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCCceeeceeccccccCcccccC------CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhh
Q 038002          561 KLLMPNQTGIVAGVRGSRGYMAPEWQNS------GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF  634 (702)
Q Consensus       561 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~  634 (702)
                      +.+.....  .....||+.|+|||++.+      ..++.++||||+||++|||++|+.||....   ...     ....+
T Consensus       158 ~~~~~~~~--~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~---~~~-----~~~~i  227 (277)
T d1phka_         158 CQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK---QML-----MLRMI  227 (277)
T ss_dssp             EECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHH-----HHHHH
T ss_pred             eEccCCCc--eeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCC---HHH-----HHHHH
Confidence            98754332  345679999999998753      457889999999999999999999997541   111     11112


Q ss_pred             hccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       635 ~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      ..+...  .........++++.+++.+||+.||++|||++||++
T Consensus       228 ~~~~~~--~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         228 MSGNYQ--FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             HHTCCC--CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HhCCCC--CCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            222111  111122245678999999999999999999999875

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-37  Score=324.63  Aligned_cols=215  Identities=21%  Similarity=0.261  Sum_probs=176.0

Q ss_pred             ccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------------eeeEEEEEecCCeeEEEEe
Q 038002          445 VNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      +...+.||+|+|  ||++....  ..||||                               |+++++.+++++..|+|||
T Consensus         4 y~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmE   83 (320)
T d1xjda_           4 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME   83 (320)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEe
Confidence            445678889888  88887654  667776                               9999999999999999999


Q ss_pred             cCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          490 FMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       490 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      |+++|+|.+++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++++||+|||+++...... .
T Consensus        84 y~~~g~L~~~i~~~~-~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~-~  158 (320)
T d1xjda_          84 YLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD-A  158 (320)
T ss_dssp             CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-C
T ss_pred             ecCCCcHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhccccc-c
Confidence            999999999998655 789999999999999999999999   99999999999999999999999999998654332 2


Q ss_pred             eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCH
Q 038002          570 IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDK  649 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  649 (702)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||....  . ..     .......+.      ...+.
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~--~-~~-----~~~~i~~~~------~~~p~  224 (320)
T d1xjda_         159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD--E-EE-----LFHSIRMDN------PFYPR  224 (320)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--H-HH-----HHHHHHHCC------CCCCT
T ss_pred             cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCC--H-HH-----HHHHHHcCC------CCCCc
Confidence            3345679999999999999999999999999999999999999997431  1 11     111111111      12223


Q ss_pred             HHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 038002          650 ITLERMVKTGLLCIQDEPNLRPSMK-NVIL  678 (702)
Q Consensus       650 ~~~~~l~~li~~cL~~dP~~RPt~~-evl~  678 (702)
                      ..+..+.+|+.+||+.||++||+++ |+++
T Consensus       225 ~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         225 WLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             cCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            3456789999999999999999996 6753

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-37  Score=318.25  Aligned_cols=236  Identities=20%  Similarity=0.179  Sum_probs=177.7

Q ss_pred             ccceEEEeEE--EEEeeeehhhhHhh--------------------------eeeEEEEEecC----CeeEEEEecCCCC
Q 038002          447 DKRKLLTVLA--GCLGSITFLCFLIA--------------------------ISSLLVYKHRS----SKKLLVYEFMSKG  494 (702)
Q Consensus       447 ~~~~l~~g~~--v~~~~~~~~~~avk--------------------------i~~l~~~~~~~----~~~~lV~e~~~~g  494 (702)
                      ..++||+|+|  ||+|......||||                          |+++++++..+    ...++||||+++|
T Consensus         7 l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g   86 (303)
T d1vjya_           7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG   86 (303)
T ss_dssp             EEEEEECCSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred             EEEEEeeCCCeEEEEEEECCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCC
Confidence            3467999998  99998877888888                          88888776543    3689999999999


Q ss_pred             CHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcC-----CCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc
Q 038002          495 SLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC-----EVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       495 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      +|.++|++.  .+++.+++.++.|++.||+|||+.+     ..+|+||||||+||||+.++.+||+|||+++........
T Consensus        87 ~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~  164 (303)
T d1vjya_          87 SLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT  164 (303)
T ss_dssp             BHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE
T ss_pred             CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcc
Confidence            999999764  5899999999999999999999621     239999999999999999999999999999987544322


Q ss_pred             ---eeeceeccccccCcccccCC------CCCccccccchhHhHHHhhhCCcCCcCCCCCcc---hh----hhHHHHHHh
Q 038002          570 ---IVAGVRGSRGYMAPEWQNSG------LITVKSDVYSFGVVLLEIICCRSNFEVNVSTAD---EV----LLSTWVYNC  633 (702)
Q Consensus       570 ---~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~---~~----~~~~~~~~~  633 (702)
                         ......||+.|+|||++.+.      .++.++|||||||++|||+||..||........   ..    .........
T Consensus       165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (303)
T d1vjya_         165 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV  244 (303)
T ss_dssp             ECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHH
T ss_pred             eeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHH
Confidence               23356799999999988654      257799999999999999999988854321110   00    001111112


Q ss_pred             hhcccccccc-ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          634 FVAGEFNKLV-EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       634 ~~~~~~~~~~-~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      .........+ ......+....+.+++.+||+.||++|||+.||+++|+++.
T Consensus       245 ~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~  296 (303)
T d1vjya_         245 VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             HTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            2222221111 11223456678999999999999999999999999998754

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7e-37  Score=319.57  Aligned_cols=212  Identities=23%  Similarity=0.241  Sum_probs=176.2

Q ss_pred             ccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEEec
Q 038002          445 VNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      ++..+.||+|++  ||++....  ..||||                              |+++++++++++..|+||||
T Consensus         6 y~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~   85 (316)
T d1fota_           6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY   85 (316)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeee
Confidence            455678999988  88888653  677877                              89999999999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      ++||+|..++.... .+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.....    
T Consensus        86 ~~gg~l~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~----  157 (316)
T d1fota_          86 IEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV----  157 (316)
T ss_dssp             CCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC----
T ss_pred             cCCccccccccccc-cccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccceEeccc----
Confidence            99999999998765 788899999999999999999999   9999999999999999999999999999876432    


Q ss_pred             eeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHH
Q 038002          571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI  650 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  650 (702)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||....  . ..     ....+..+..      ..+..
T Consensus       158 ~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~--~-~~-----~~~~i~~~~~------~~p~~  223 (316)
T d1fota_         158 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN--T-MK-----TYEKILNAEL------RFPPF  223 (316)
T ss_dssp             BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--H-HH-----HHHHHHHCCC------CCCTT
T ss_pred             cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcC--H-HH-----HHHHHHcCCC------CCCCC
Confidence            234679999999999999999999999999999999999999996431  1 11     1111112211      12233


Q ss_pred             HHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038002          651 TLERMVKTGLLCIQDEPNLRP-----SMKNVIL  678 (702)
Q Consensus       651 ~~~~l~~li~~cL~~dP~~RP-----t~~evl~  678 (702)
                      .++.+.+++.+||+.||.+||     |++++++
T Consensus       224 ~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         224 FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence            456788999999999999996     8999986

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.5e-36  Score=321.52  Aligned_cols=214  Identities=20%  Similarity=0.193  Sum_probs=178.9

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCCeeEEEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSSKKLLVY  488 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~~~~lV~  488 (702)
                      +.++..+.||+|+|  ||++....  ..||||                              |++++..+.+....++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            56677789999998  99988653  678887                              899999999999999999


Q ss_pred             ecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCC
Q 038002          489 EFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQT  568 (702)
Q Consensus       489 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  568 (702)
                      ||+.+|+|.+++.+.+ .+++.++..++.||+.||.|||++   +|+||||||+|||++.++.+||+|||+++.....  
T Consensus       121 e~~~~g~l~~~l~~~~-~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~--  194 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--  194 (350)
T ss_dssp             ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred             ccccccchhhhHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeecccc--
Confidence            9999999999997765 799999999999999999999999   9999999999999999999999999999976432  


Q ss_pred             ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          569 GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       569 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                        .....||+.|+|||++.+..++.++|||||||++|||++|+.||....    ...    ....+..+..      ..+
T Consensus       195 --~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~----~~~----~~~~i~~~~~------~~p  258 (350)
T d1rdqe_         195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ----PIQ----IYEKIVSGKV------RFP  258 (350)
T ss_dssp             --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHH----HHHHHHHCCC------CCC
T ss_pred             --cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcC----HHH----HHHHHhcCCC------CCC
Confidence              234679999999999999999999999999999999999999996431    111    1111111111      112


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038002          649 KITLERMVKTGLLCIQDEPNLRP-----SMKNVIL  678 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~  678 (702)
                      ...+..+.+++.+||+.||.+|+     |++|+++
T Consensus       259 ~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         259 SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            33456788999999999999994     8999986

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-37  Score=321.39  Aligned_cols=221  Identities=19%  Similarity=0.205  Sum_probs=179.9

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      +++...+.||+|+|  ||++....  ..||+|                          |++++++++++++.|||||||+
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~   84 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS   84 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCC
Confidence            45667789999998  89887654  678887                          9999999999999999999999


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC--CCcEEEecccceeecCCCCCce
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD--SWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      ||+|.+++......+++.++..++.||+.||+|||++   +|+||||||+|||++.  ...+||+|||++.......  .
T Consensus        85 gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~--~  159 (321)
T d1tkia_          85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD--N  159 (321)
T ss_dssp             CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC--E
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhccccCC--c
Confidence            9999999987766799999999999999999999999   9999999999999975  4589999999998764332  3


Q ss_pred             eeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHH
Q 038002          571 VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKI  650 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  650 (702)
                      .....+++.|+|||.+.+..++.++|||||||++|||++|..||.....   ..     ....+......  .+......
T Consensus       160 ~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~---~~-----~~~~i~~~~~~--~~~~~~~~  229 (321)
T d1tkia_         160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN---QQ-----IIENIMNAEYT--FDEEAFKE  229 (321)
T ss_dssp             EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH---HH-----HHHHHHHTCCC--CCHHHHTT
T ss_pred             ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCH---HH-----HHHHHHhCCCC--CChhhccC
Confidence            4456789999999999999999999999999999999999999965411   11     11111111111  11111112


Q ss_pred             HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          651 TLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       651 ~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                      .++++.+++.+||+.||++|||++|+++
T Consensus       230 ~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         230 ISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            3567899999999999999999999997

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.6e-37  Score=317.51  Aligned_cols=228  Identities=20%  Similarity=0.231  Sum_probs=173.7

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh------------------------------eeeEEEEEecCC----e
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA------------------------------ISSLLVYKHRSS----K  483 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk------------------------------i~~l~~~~~~~~----~  483 (702)
                      .++++..+.||+|+|  ||++....  ..||||                              |+++++++...+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            456677789999988  99998653  778887                              788887766543    4


Q ss_pred             eEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          484 KLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                      .||||||++|++|.+++...+ .+++.+++.++.||+.||+|||++   +|+||||||+|||++.++.++|+|||.+...
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~~-~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~  161 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI  161 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred             EEEEEECCCCCEehhhhcccC-CCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhhhh
Confidence            899999999999999987765 799999999999999999999999   9999999999999999999999999998865


Q ss_pred             CCCCC--ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccc
Q 038002          564 MPNQT--GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNK  641 (702)
Q Consensus       564 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  641 (702)
                      .....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||....  ..+     ............ 
T Consensus       162 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~--~~~-----~~~~~~~~~~~~-  233 (277)
T d1o6ya_         162 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS--PVS-----VAYQHVREDPIP-  233 (277)
T ss_dssp             C----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--HHH-----HHHHHHHCCCCC-
T ss_pred             ccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcC--HHH-----HHHHHHhcCCCC-
Confidence            43322  23345679999999999999999999999999999999999999996431  111     111111111111 


Q ss_pred             ccccccCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhCC
Q 038002          642 LVEEEVDKITLERMVKTGLLCIQDEPNLRP-SMKNVILMLEGT  683 (702)
Q Consensus       642 ~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-t~~evl~~Le~~  683 (702)
                        ........++.+.+++.+||+.||++|| |++++++.|.++
T Consensus       234 --~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~  274 (277)
T d1o6ya_         234 --PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  274 (277)
T ss_dssp             --GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             --CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHH
Confidence              1112233456889999999999999999 899999988754

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-37  Score=316.73  Aligned_cols=223  Identities=22%  Similarity=0.207  Sum_probs=170.8

Q ss_pred             ccccceEEEeEE--EEEeeeeh-----hhhHhh------------------------------eeeEEEEEecCCeeEEE
Q 038002          445 VNDKRKLLTVLA--GCLGSITF-----LCFLIA------------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~-----~~~avk------------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      ++..++||+|+|  ||+|....     ..||||                              |+++++++.+ +..++|
T Consensus        10 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv   88 (273)
T d1u46a_          10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMV   88 (273)
T ss_dssp             EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             eEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchhee
Confidence            445567888887  77776532     245665                              8999998865 467899


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      |||+++|+|.+++......+++.+++.++.||++||+|||++   +|+||||||+||+++.++.+||+|||+++......
T Consensus        89 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~  165 (273)
T d1u46a_          89 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND  165 (273)
T ss_dssp             EECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred             eeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhcccCC
Confidence            999999999999887666799999999999999999999999   99999999999999999999999999999875544


Q ss_pred             Cce--eeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccc
Q 038002          568 TGI--VAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVE  644 (702)
Q Consensus       568 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  644 (702)
                      ...  .....|+..|+|||.+.+..++.++||||||+++|||++ |+.||....  .  ...   . ..+......    
T Consensus       166 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~--~--~~~---~-~~i~~~~~~----  233 (273)
T d1u46a_         166 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN--G--SQI---L-HKIDKEGER----  233 (273)
T ss_dssp             CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC--H--HHH---H-HHHHTSCCC----
T ss_pred             CcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcC--H--HHH---H-HHHHhCCCC----
Confidence            322  234567889999999999999999999999999999998 899996431  1  111   1 111111111    


Q ss_pred             cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          645 EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       645 ~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      .+.+...+..+.+++.+||+.||++|||++||++.|+++
T Consensus       234 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         234 LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            122233456789999999999999999999999999764

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-37  Score=319.32  Aligned_cols=227  Identities=26%  Similarity=0.308  Sum_probs=180.2

Q ss_pred             cccccccceEEEeEE--EEEeeeeh---------hhhHhh-----------------------------eeeEEEEEecC
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF---------LCFLIA-----------------------------ISSLLVYKHRS  481 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~---------~~~avk-----------------------------i~~l~~~~~~~  481 (702)
                      ++.+...+.||+|+|  ||++....         ..||||                             |+++++.+.++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            355566788999998  98887533         246776                             99999999999


Q ss_pred             CeeEEEEecCCCCCHHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEE
Q 038002          482 SKKLLVYEFMSKGSLADLLFNLE---------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILI  546 (702)
Q Consensus       482 ~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  546 (702)
                      +..++||||+++|+|.++|....               ..+++.+++.++.||+.||+|||++   +|+||||||+|||+
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiLl  168 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV  168 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred             CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeecccceee
Confidence            99999999999999999997553               3489999999999999999999999   99999999999999


Q ss_pred             eCCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchh
Q 038002          547 DDSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEV  624 (702)
Q Consensus       547 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~  624 (702)
                      +.++.+||+|||+++........ ......+++.|+|||.+.++.++.++||||||+++|||++ |..||....  ..+ 
T Consensus       169 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~--~~~-  245 (299)
T d1fgka_         169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--VEE-  245 (299)
T ss_dssp             CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHH-
T ss_pred             cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCC--HHH-
Confidence            99999999999999877543322 2345678999999999999999999999999999999998 688886431  111 


Q ss_pred             hhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          625 LLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                           ....+..+.     ....+...++++.+++.+||+.||++|||++||+++|+++.
T Consensus       246 -----~~~~i~~~~-----~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         246 -----LFKLLKEGH-----RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             -----HHHHHHTTC-----CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -----HHHHHHcCC-----CCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence                 111222221     11223334567899999999999999999999999998864

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.5e-37  Score=319.54  Aligned_cols=227  Identities=23%  Similarity=0.287  Sum_probs=180.6

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-------hhhHhh----------------------------eeeEEEEEecCCeeE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-------LCFLIA----------------------------ISSLLVYKHRSSKKL  485 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-------~~~avk----------------------------i~~l~~~~~~~~~~~  485 (702)
                      +.+...++||+|+|  ||+|....       ..||||                            |+++++++.+++..+
T Consensus        13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~   92 (301)
T d1lufa_          13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC   92 (301)
T ss_dssp             GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred             HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceE
Confidence            45666789999998  99987542       457776                            788899999999999


Q ss_pred             EEEecCCCCCHHHHhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCC
Q 038002          486 LVYEFMSKGSLADLLFNLE-----------------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLR  542 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~  542 (702)
                      +||||+++|+|.+++....                       ..+++.+++.++.||+.||+|||++   +|+||||||+
T Consensus        93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~ivHrDlKp~  169 (301)
T d1lufa_          93 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATR  169 (301)
T ss_dssp             EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred             EEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeEeeEEccc
Confidence            9999999999999996432                       2378899999999999999999999   9999999999


Q ss_pred             cEEEeCCCcEEEecccceeecCCCCC-ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCC-cCCcCCCCC
Q 038002          543 NILIDDSWRAKISDFGLAKLLMPNQT-GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCR-SNFEVNVST  620 (702)
Q Consensus       543 NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~-~Pf~~~~~~  620 (702)
                      |||++.++.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++|. .||...  .
T Consensus       170 NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~--~  247 (301)
T d1lufa_         170 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM--A  247 (301)
T ss_dssp             GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--C
T ss_pred             ceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCC--C
Confidence            99999999999999999986643332 2234567899999999999999999999999999999999996 566533  1


Q ss_pred             cchhhhHHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          621 ADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ..+      ....+..+...     +.+...+.++.+|+.+||+.||++||||.||+++|+++.+
T Consensus       248 ~~e------~~~~v~~~~~~-----~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~  301 (301)
T d1lufa_         248 HEE------VIYYVRDGNIL-----ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  301 (301)
T ss_dssp             HHH------HHHHHHTTCCC-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHH------HHHHHHcCCCC-----CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            111      11112222221     2233345678999999999999999999999999998753

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-37  Score=313.13  Aligned_cols=220  Identities=24%  Similarity=0.257  Sum_probs=171.1

Q ss_pred             ccccceEEEeEE--EEEeeeehhhhHhh-------------------------eeeEEEEE-ecCCeeEEEEecCCCCCH
Q 038002          445 VNDKRKLLTVLA--GCLGSITFLCFLIA-------------------------ISSLLVYK-HRSSKKLLVYEFMSKGSL  496 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~~~~avk-------------------------i~~l~~~~-~~~~~~~lV~e~~~~gsL  496 (702)
                      ++-.++||+|+|  ||++......||||                         |+++++++ ++.+..++||||+++|+|
T Consensus         9 ~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L   88 (262)
T d1byga_           9 LKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL   88 (262)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred             eEEeEEEecCCCeEEEEEEECCeEEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCH
Confidence            445577999988  99998877888988                         88999877 455678999999999999


Q ss_pred             HHHhhcCC-CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceeecee
Q 038002          497 ADLLFNLE-TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVAGVR  575 (702)
Q Consensus       497 ~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  575 (702)
                      .++|.... ..+++..++.++.||+.||+|||+.   +|+||||||+||+++.++.+||+|||+++.....    .....
T Consensus        89 ~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~----~~~~~  161 (262)
T d1byga_          89 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGK  161 (262)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----------------
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCCC----Ccccc
Confidence            99997643 2489999999999999999999999   9999999999999999999999999999865332    23346


Q ss_pred             ccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccCHHHHHH
Q 038002          576 GSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVDKITLER  654 (702)
Q Consensus       576 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  654 (702)
                      +++.|+|||++.+..++.++||||||+++|||+| |+.||....  ..+  ...    .+..+.     ..+.+...+++
T Consensus       162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~--~~~--~~~----~i~~~~-----~~~~~~~~~~~  228 (262)
T d1byga_         162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKD--VVP----RVEKGY-----KMDAPDGCPPA  228 (262)
T ss_dssp             CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--GGG--HHH----HHTTTC-----CCCCCTTCCHH
T ss_pred             ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCC--HHH--HHH----HHHcCC-----CCCCCccCCHH
Confidence            7899999999998999999999999999999998 677775431  111  111    111111     12233344568


Q ss_pred             HHHHHHHcccCCCCCCCCHHHHHHHHhCCc
Q 038002          655 MVKTGLLCIQDEPNLRPSMKNVILMLEGTM  684 (702)
Q Consensus       655 l~~li~~cL~~dP~~RPt~~evl~~Le~~~  684 (702)
                      +.+++.+||+.||++|||+.+|+++|+.+.
T Consensus       229 ~~~li~~cl~~dP~~Rps~~~l~~~L~~i~  258 (262)
T d1byga_         229 VYEVMKNCWHLDAAMRPSFLQLREQLEHIK  258 (262)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            889999999999999999999999998753

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-36  Score=315.59  Aligned_cols=222  Identities=20%  Similarity=0.167  Sum_probs=167.2

Q ss_pred             ceEEEeEE--EEEeeeeh--hhhHhh--------------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          449 RKLLTVLA--GCLGSITF--LCFLIA--------------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       449 ~~l~~g~~--v~~~~~~~--~~~avk--------------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      +.||+|+|  ||++....  ..||||                                |+++++++.++++.|+||||+.
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~   83 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME   83 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred             eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhc
Confidence            46777766  77776543  556666                                8889999999999999999999


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCceee
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGIVA  572 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  572 (702)
                      ++++..++.. ...+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++....... ...
T Consensus        84 ~~~~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~-~~~  158 (299)
T d1ua2a_          84 TDLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-AYT  158 (299)
T ss_dssp             EEHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC-CCC
T ss_pred             chHHhhhhhc-ccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCCCcc-ccc
Confidence            8877766543 44789999999999999999999999   999999999999999999999999999987644332 233


Q ss_pred             ceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhc---cccc--------
Q 038002          573 GVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVA---GEFN--------  640 (702)
Q Consensus       573 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~---~~~~--------  640 (702)
                      ...||+.|+|||++.. ..++.++|||||||++|||++|..||......   ..+.. +......   ..+.        
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~---~~l~~-i~~~~~~~~~~~~~~~~~~~~~  234 (299)
T d1ua2a_         159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL---DQLTR-IFETLGTPTEEQWPDMCSLPDY  234 (299)
T ss_dssp             CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHH-HHHHHCCCCTTTSSSTTSSTTC
T ss_pred             ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHH---HHHHH-HHHhcCCCChhhccchhccchh
Confidence            4578999999998764 56799999999999999999999999654211   11111 1110000   0000        


Q ss_pred             ----cccc---cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          641 ----KLVE---EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       641 ----~~~~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                          ....   ........+.+.+|+.+||+.||++|||++|+++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         235 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             CCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             hhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence                0000   01112345689999999999999999999999873

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-36  Score=314.46  Aligned_cols=227  Identities=22%  Similarity=0.308  Sum_probs=179.8

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-------hhhHhh-----------------------------eeeEEEEEecCCee
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-------LCFLIA-----------------------------ISSLLVYKHRSSKK  484 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-------~~~avk-----------------------------i~~l~~~~~~~~~~  484 (702)
                      +.+...++||+|+|  ||+|....       ..||||                             |+++++.+.+++..
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~  102 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT  102 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence            33444678999998  88886532       456776                             88999999999999


Q ss_pred             EEEEecCCCCCHHHHhhcCC-----------------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe
Q 038002          485 LLVYEFMSKGSLADLLFNLE-----------------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID  547 (702)
Q Consensus       485 ~lV~e~~~~gsL~~~l~~~~-----------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  547 (702)
                      ++||||+++|+|.+++....                 ..+++.++..++.||++||+|||++   +|+||||||+||+++
T Consensus       103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NIl~~  179 (311)
T d1t46a_         103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLT  179 (311)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE
T ss_pred             EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeeccccccccccc
Confidence            99999999999999997543                 2478999999999999999999999   999999999999999


Q ss_pred             CCCcEEEecccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhh
Q 038002          548 DSWRAKISDFGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLL  626 (702)
Q Consensus       548 ~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~  626 (702)
                      .++.+||+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||+|+..|+.......+.  +
T Consensus       180 ~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~--~  257 (311)
T d1t46a_         180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--F  257 (311)
T ss_dssp             TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH--H
T ss_pred             ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH--H
Confidence            9999999999999977544432 334578999999999999999999999999999999999955444332222211  1


Q ss_pred             HHHHHHhhhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          627 STWVYNCFVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      ....    ..+ .    ....+...+..+.+||.+||+.||++|||++||+++|+++
T Consensus       258 ~~~i----~~~-~----~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~  305 (311)
T d1t46a_         258 YKMI----KEG-F----RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (311)
T ss_dssp             HHHH----HHT-C----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHH----hcC-C----CCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            1111    111 1    1122233456799999999999999999999999999864

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-36  Score=316.35  Aligned_cols=223  Identities=27%  Similarity=0.300  Sum_probs=176.3

Q ss_pred             ccccceEEEeEE--EEEeeeeh----hhhHhh-----------------------------eeeEEEEEecCCeeEEEEe
Q 038002          445 VNDKRKLLTVLA--GCLGSITF----LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYE  489 (702)
Q Consensus       445 ~~~~~~l~~g~~--v~~~~~~~----~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e  489 (702)
                      ++..+.||+|+|  ||+|....    ..||||                             |+++++++.+++..++|||
T Consensus        12 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~e   91 (309)
T d1fvra_          12 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE   91 (309)
T ss_dssp             CEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEE
Confidence            344578999988  88887654    245555                             8999999999999999999


Q ss_pred             cCCCCCHHHHhhcC---------------CCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEE
Q 038002          490 FMSKGSLADLLFNL---------------ETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKI  554 (702)
Q Consensus       490 ~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl  554 (702)
                      |+++|+|.++|...               ...+++.++..++.||++||.|||++   +|+||||||+|||++.++.+||
T Consensus        92 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~~~kl  168 (309)
T d1fvra_          92 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKI  168 (309)
T ss_dssp             CCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEE
T ss_pred             ecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCCceEE
Confidence            99999999999754               24689999999999999999999999   9999999999999999999999


Q ss_pred             ecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCc-CCcCCCCCcchhhhHHHHHHh
Q 038002          555 SDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRS-NFEVNVSTADEVLLSTWVYNC  633 (702)
Q Consensus       555 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~-Pf~~~~~~~~~~~~~~~~~~~  633 (702)
                      +|||+++.......  .....||..|+|||.+.+..++.++|||||||++|||++|.. ||...  .  ...    ....
T Consensus       169 ~DfG~a~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~--~--~~~----~~~~  238 (309)
T d1fvra_         169 ADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM--T--CAE----LYEK  238 (309)
T ss_dssp             CCTTCEESSCEECC--C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--C--HHH----HHHH
T ss_pred             cccccccccccccc--ccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCC--C--HHH----HHHH
Confidence            99999986532222  234568999999999999999999999999999999999765 56432  1  111    1111


Q ss_pred             hhccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          634 FVAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       634 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ...+.     ..+.+...++++.++|.+||+.||++||||+||++.|+++.+
T Consensus       239 i~~~~-----~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         239 LPQGY-----RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             GGGTC-----CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHhcC-----CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            22211     112233456789999999999999999999999999988653

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-36  Score=315.01  Aligned_cols=223  Identities=23%  Similarity=0.285  Sum_probs=176.5

Q ss_pred             cccccceEEEeEE--EEEeeeeh--h----hhHhh----------------------------eeeEEEEEecCCeeEEE
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--L----CFLIA----------------------------ISSLLVYKHRSSKKLLV  487 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~----~~avk----------------------------i~~l~~~~~~~~~~~lV  487 (702)
                      .++..+.||+|+|  ||+|....  .    .||+|                            |+++++++.++ ..+++
T Consensus        10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v   88 (317)
T d1xkka_          10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI   88 (317)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEE
T ss_pred             HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEE
Confidence            4666789999998  88887543  2    36665                            88999888765 56788


Q ss_pred             EecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCC
Q 038002          488 YEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       488 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  567 (702)
                      ||++.+|+|.+++......+++.+++.++.||++||+|||++   +|+||||||+|||++.++.+||+|||+++......
T Consensus        89 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  165 (317)
T d1xkka_          89 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  165 (317)
T ss_dssp             EECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred             EEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence            999999999999988877899999999999999999999999   99999999999999999999999999999875444


Q ss_pred             Cc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhh-CCcCCcCCCCCcchhhhHHHHHHhhhcccccccccc
Q 038002          568 TG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIIC-CRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEE  645 (702)
Q Consensus       568 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  645 (702)
                      .. ......||+.|+|||++.++.++.++|||||||++|||+| |..||.....  .+  +..    ....+..     .
T Consensus       166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~--~~--~~~----~i~~~~~-----~  232 (317)
T d1xkka_         166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SE--ISS----ILEKGER-----L  232 (317)
T ss_dssp             C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCG--GG--HHH----HHHHTCC-----C
T ss_pred             ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCH--HH--HHH----HHHcCCC-----C
Confidence            32 2334568999999999999999999999999999999998 7888865421  11  111    1111111     1


Q ss_pred             ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          646 EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       646 ~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      ..+...++.+.+++.+||+.||++|||+.||++.|+.+
T Consensus       233 ~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~  270 (317)
T d1xkka_         233 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  270 (317)
T ss_dssp             CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHH
Confidence            22333456789999999999999999999999998764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-36  Score=314.83  Aligned_cols=223  Identities=23%  Similarity=0.374  Sum_probs=177.9

Q ss_pred             cceEEEeEE--EEEeeeeh-----hhhHhh----------------------------eeeEEEEEe-cCCeeEEEEecC
Q 038002          448 KRKLLTVLA--GCLGSITF-----LCFLIA----------------------------ISSLLVYKH-RSSKKLLVYEFM  491 (702)
Q Consensus       448 ~~~l~~g~~--v~~~~~~~-----~~~avk----------------------------i~~l~~~~~-~~~~~~lV~e~~  491 (702)
                      .++||+|+|  ||+|....     ..||||                            |+++++++. .++..++||||+
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            457999998  99988644     247777                            888887754 567899999999


Q ss_pred             CCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCc--
Q 038002          492 SKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTG--  569 (702)
Q Consensus       492 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~--  569 (702)
                      ++|+|.+++.......++.+++.++.|+++||.|||+.   +|+||||||+|||+++++.+||+|||+++........  
T Consensus       112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~  188 (311)
T d1r0pa_         112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV  188 (311)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT
T ss_pred             ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhccccccccc
Confidence            99999999988777788999999999999999999999   9999999999999999999999999999876543321  


Q ss_pred             -eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccccccccccC
Q 038002          570 -IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLVEEEVD  648 (702)
Q Consensus       570 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  648 (702)
                       ......||+.|+|||.+....++.++||||||+++|||++|..||.......+   ....    ...+..     ...+
T Consensus       189 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~---~~~~----i~~g~~-----~~~p  256 (311)
T d1r0pa_         189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVY----LLQGRR-----LLQP  256 (311)
T ss_dssp             TCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC---------CHHH----HHTTCC-----CCCC
T ss_pred             eecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH---HHHH----HHcCCC-----CCCc
Confidence             22345689999999999999999999999999999999998888865422211   1111    111111     1112


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          649 KITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       649 ~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ...++.+.+++.+||+.||++||+++||++.|+++..
T Consensus       257 ~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         257 EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  293 (311)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            2335678899999999999999999999999998753

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-36  Score=308.43  Aligned_cols=209  Identities=22%  Similarity=0.263  Sum_probs=167.3

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------------eeeEEEEEecCCe
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------------ISSLLVYKHRSSK  483 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------------i~~l~~~~~~~~~  483 (702)
                      .+++..+.||+|+|  ||++....  ..||||                                   |+++++++++++.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            44556677888876  77776543  556665                                   7788899999999


Q ss_pred             eEEEEecCCC-CCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCC-CcEEEeccccee
Q 038002          484 KLLVYEFMSK-GSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDS-WRAKISDFGLAK  561 (702)
Q Consensus       484 ~~lV~e~~~~-gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Dfg~a~  561 (702)
                      .++||||+.+ +++.+++.... .+++.+++.++.||++||+|||++   +|+||||||+|||++.+ +.+||+|||+++
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~~-~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DFG~a~  159 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGA  159 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EEEEEEeccCcchHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECccccce
Confidence            9999999976 68888887654 799999999999999999999999   99999999999999854 799999999998


Q ss_pred             ecCCCCCceeeceeccccccCcccccCCCC-CccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccc
Q 038002          562 LLMPNQTGIVAGVRGSRGYMAPEWQNSGLI-TVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFN  640 (702)
Q Consensus       562 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  640 (702)
                      ......   .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||...    +.          ...... 
T Consensus       160 ~~~~~~---~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~----~~----------i~~~~~-  221 (273)
T d1xwsa_         160 LLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EE----------IIRGQV-  221 (273)
T ss_dssp             ECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----HH----------HHHCCC-
T ss_pred             eccccc---ccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc----hH----------Hhhccc-
Confidence            754322   345679999999999877655 67789999999999999999999632    11          011110 


Q ss_pred             cccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          641 KLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       641 ~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                           ..+...++++.+++.+||+.||++|||++|+++
T Consensus       222 -----~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         222 -----FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             -----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -----CCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                 112223567899999999999999999999987

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-36  Score=309.74  Aligned_cols=229  Identities=20%  Similarity=0.170  Sum_probs=173.1

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      .++..++||+|+|  ||++....  ..||||                             |++++.+++++++.|+||||
T Consensus         3 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~   82 (298)
T d1gz8a_           3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   82 (298)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             CCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEee
Confidence            4566788999988  88887654  678877                             89999999999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      +.++.+..........+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus        83 ~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~-~~  158 (298)
T d1gz8a_          83 LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RT  158 (298)
T ss_dssp             CSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS-BC
T ss_pred             cCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccCCc-cc
Confidence            976555544455555799999999999999999999999   99999999999999999999999999998764333 22


Q ss_pred             eeceeccccccCcccccCCC-CCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhh--hc-----------
Q 038002          571 VAGVRGSRGYMAPEWQNSGL-ITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF--VA-----------  636 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~--~~-----------  636 (702)
                      .....||+.|+|||.+.... ++.++|||||||++|+|++|+.||......  + .+........  .+           
T Consensus       159 ~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~--~-~~~~i~~~~~~~~~~~~~~~~~~~~  235 (298)
T d1gz8a_         159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--D-QLFRIFRTLGTPDEVVWPGVTSMPD  235 (298)
T ss_dssp             TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--H-HHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred             ceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHH--H-HHHHHHHhcCCCchhhccccccccc
Confidence            34457999999999876554 588999999999999999999999754111  1 1111000000  00           


Q ss_pred             --ccccccccc---ccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          637 --GEFNKLVEE---EVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       637 --~~~~~~~~~---~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                        .........   ......++.+.+++.+||+.||++|||++|+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence              000000000   1122345678999999999999999999999985

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-36  Score=310.50  Aligned_cols=230  Identities=19%  Similarity=0.153  Sum_probs=174.3

Q ss_pred             cccccccceEEEeEE--EEEeeeeh---hhhHhh--------------------------------eeeEEEEEe-----
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF---LCFLIA--------------------------------ISSLLVYKH-----  479 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~---~~~avk--------------------------------i~~l~~~~~-----  479 (702)
                      .++++..++||+|+|  ||++....   +.||||                                |+++++.+.     
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            456677788999987  88887542   457877                                666776653     


Q ss_pred             cCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccc
Q 038002          480 RSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGL  559 (702)
Q Consensus       480 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~  559 (702)
                      .+...+++|||++++.+..........+++..++.++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~dfg~  162 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL  162 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecchhh
Confidence            35688999999999888777666666799999999999999999999999   999999999999999999999999999


Q ss_pred             eeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhh--cc
Q 038002          560 AKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFV--AG  637 (702)
Q Consensus       560 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~--~~  637 (702)
                      +......  .......||+.|+|||++.+..++.++||||+||++|||++|+.||.....   ...+.........  ..
T Consensus       163 ~~~~~~~--~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~~~~~~  237 (305)
T d1blxa_         163 ARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD---VDQLGKILDVIGLPGEE  237 (305)
T ss_dssp             CCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCCCGG
T ss_pred             hhhhccc--ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCH---HHHHHHHHHhhCCCchh
Confidence            8864322  234456799999999999999999999999999999999999999975421   1111111100000  00


Q ss_pred             ccc--------------cccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          638 EFN--------------KLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       638 ~~~--------------~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      .+.              ...........++.+.+|+.+||+.||++|||++|+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            000              000001223345678899999999999999999999863

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-35  Score=309.23  Aligned_cols=227  Identities=25%  Similarity=0.377  Sum_probs=181.4

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-------hhhHhh----------------------------eeeEEEEEecCCeeE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-------LCFLIA----------------------------ISSLLVYKHRSSKKL  485 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-------~~~avk----------------------------i~~l~~~~~~~~~~~  485 (702)
                      +.+...++||+|+|  ||+|....       ..||||                            |+++++.+..++..+
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~   99 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   99 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence            44556688999998  99887642       467877                            999999999999999


Q ss_pred             EEEecCCCCCHHHHhhcCC---------CCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEec
Q 038002          486 LVYEFMSKGSLADLLFNLE---------TRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISD  556 (702)
Q Consensus       486 lV~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D  556 (702)
                      +||||+++|+|.+++....         ..+++..+..++.|+++||+|||++   +|+||||||+|||++.++++||+|
T Consensus       100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~Kl~D  176 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD  176 (308)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECC
T ss_pred             EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEEEee
Confidence            9999999999999986421         2468899999999999999999999   999999999999999999999999


Q ss_pred             ccceeecCCCCCc-eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCC-cCCcCCCCCcchhhhHHHHHHhh
Q 038002          557 FGLAKLLMPNQTG-IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCR-SNFEVNVSTADEVLLSTWVYNCF  634 (702)
Q Consensus       557 fg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~-~Pf~~~~~~~~~~~~~~~~~~~~  634 (702)
                      ||+++........ ......||+.|+|||.+.+..++.++||||||+++|||+||. .||... . ..+      .....
T Consensus       177 FGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-~-~~~------~~~~i  248 (308)
T d1p4oa_         177 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-S-NEQ------VLRFV  248 (308)
T ss_dssp             TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-C-HHH------HHHHH
T ss_pred             cccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC-C-HHH------HHHHH
Confidence            9999876443322 223456899999999999999999999999999999999985 666432 1 111      11112


Q ss_pred             hccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCCcC
Q 038002          635 VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGTME  685 (702)
Q Consensus       635 ~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~~~  685 (702)
                      ..+...     ..+...+..+.++|.+||+.||++|||+++|+++|++..+
T Consensus       249 ~~~~~~-----~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         249 MEGGLL-----DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             HTTCCC-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HhCCCC-----CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            222211     1223345689999999999999999999999999998755

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.5e-35  Score=303.05  Aligned_cols=231  Identities=17%  Similarity=0.127  Sum_probs=178.3

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      ++++..+.||+|+|  ||+|....  ..||||                          |..+..++.+++..++||||+ 
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~-   85 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-   85 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc-
Confidence            35667789999998  99998653  788998                          566667788899999999999 


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEe---CCCcEEEecccceeecCCCCCc
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILID---DSWRAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~a~~~~~~~~~  569 (702)
                      +++|.+.+......+++.++..++.|++.||+|||++   +|+||||||+|||++   .+..+||+|||+++.+......
T Consensus        86 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~  162 (299)
T d1ckia_          86 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  162 (299)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred             CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence            5677777776666899999999999999999999999   999999999999985   4557999999999987543321


Q ss_pred             ------eeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccccc
Q 038002          570 ------IVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNKLV  643 (702)
Q Consensus       570 ------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  643 (702)
                            ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.................. .....     
T Consensus       163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~-~~~~~-----  236 (299)
T d1ckia_         163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK-KMSTP-----  236 (299)
T ss_dssp             CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHH-HHHSC-----
T ss_pred             cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcc-cCCCC-----
Confidence                  233567999999999999999999999999999999999999999765322221111111110 00000     


Q ss_pred             ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          644 EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       644 ~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                      .+......++++.+++.+||+.||++||+++++.+.|+..
T Consensus       237 ~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         237 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             HHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             hhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            0111223456788999999999999999999998888764

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=2.1e-34  Score=297.93  Aligned_cols=231  Identities=15%  Similarity=0.106  Sum_probs=182.8

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh--------------------------eeeEEEEEecCCeeEEEEecCC
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA--------------------------ISSLLVYKHRSSKKLLVYEFMS  492 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk--------------------------i~~l~~~~~~~~~~~lV~e~~~  492 (702)
                      .+++..++||+|+|  ||++....  ..||||                          |+.++.++..+...++||||+ 
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-   83 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-   83 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-
Confidence            35566788999998  99998654  778888                          777888999999999999999 


Q ss_pred             CCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeC-----CCcEEEecccceeecCCCC
Q 038002          493 KGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDD-----SWRAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       493 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~-----~~~~kl~Dfg~a~~~~~~~  567 (702)
                      +++|.+++......+++.++..++.|++.||+|||++   ||+||||||+|||++.     ++.+||+|||+++......
T Consensus        84 ~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~  160 (293)
T d1csna_          84 GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV  160 (293)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred             CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence            7899999988777899999999999999999999999   9999999999999964     5789999999999865332


Q ss_pred             C------ceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcccccc
Q 038002          568 T------GIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFNK  641 (702)
Q Consensus       568 ~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  641 (702)
                      .      .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.............. ........... 
T Consensus       161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~-i~~~~~~~~~~-  238 (293)
T d1csna_         161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER-IGEKKQSTPLR-  238 (293)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHH-HHHHHHHSCHH-
T ss_pred             cccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHH-HHhccCCCChH-
Confidence            2      123356799999999999999999999999999999999999999976533322211111 11111111111 


Q ss_pred             ccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhCC
Q 038002          642 LVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILMLEGT  683 (702)
Q Consensus       642 ~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~Le~~  683 (702)
                          +.....++++.+++..|++.+|++||+++.+.+.|+.+
T Consensus       239 ----~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~  276 (293)
T d1csna_         239 ----ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  276 (293)
T ss_dssp             ----HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             ----HhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence                11222345788889999999999999999998888764

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.2e-34  Score=298.96  Aligned_cols=227  Identities=19%  Similarity=0.194  Sum_probs=170.5

Q ss_pred             ccccccceEEEeEE--EEEeeeeh-hhhHhh-----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF-LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~-~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      ++++..++||+|+|  ||++.... ..||||                             |++++..+.+++..+++||+
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            35566788999987  99987654 778888                             88999999999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      +.++.+..+.... ..+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||.+........ .
T Consensus        82 ~~~~~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~-~  156 (286)
T d1ob3a_          82 LDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-K  156 (286)
T ss_dssp             CSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred             ehhhhHHHHHhhc-CCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceecccCcc-c
Confidence            9887666665544 4799999999999999999999999   999999999999999999999999999987643322 2


Q ss_pred             eeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhc---cccc---c--
Q 038002          571 VAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVA---GEFN---K--  641 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~---~~~~---~--  641 (702)
                      .....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||.....  .+. +.. .......   ....   .  
T Consensus       157 ~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~--~~~-~~~-i~~~~~~~~~~~~~~~~~~~  232 (286)
T d1ob3a_         157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE--ADQ-LMR-IFRILGTPNSKNWPNVTELP  232 (286)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHH-HHH-HHHHHCCCCTTTSTTGGGST
T ss_pred             cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCH--HHH-HHH-HHHhhCCCChhhccchhhhh
Confidence            334568999999998765 4678999999999999999999999964311  111 111 0000000   0000   0  


Q ss_pred             -c---c-------ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          642 -L---V-------EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       642 -~---~-------~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                       .   .       ........++.+.+++.+||+.||++|||++|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             0   0       00112334568899999999999999999999984

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-34  Score=298.05  Aligned_cols=223  Identities=22%  Similarity=0.212  Sum_probs=177.1

Q ss_pred             cccccccceEEEeEE--EEEeeee-----hhhhHhh--------------------------------eeeEEEEEecCC
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSIT-----FLCFLIA--------------------------------ISSLLVYKHRSS  482 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~-----~~~~avk--------------------------------i~~l~~~~~~~~  482 (702)
                      -+.++..++||+|+|  ||++...     ...||+|                                |++++..+++..
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~  102 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  102 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence            355667789999988  8887542     2457776                                888888999999


Q ss_pred             eeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          483 KKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       483 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      ..++||||+.+|+|.+++.... .+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.
T Consensus       103 ~~~~v~e~~~~~~L~~~i~~~~-~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a~~  178 (322)
T d1vzoa_         103 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE  178 (322)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred             ceeeeeecccccHHHHHHHhcc-cccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccchhh
Confidence            9999999999999999998765 678899999999999999999999   999999999999999999999999999987


Q ss_pred             cCCCCCceeeceeccccccCcccccCC--CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccc
Q 038002          563 LMPNQTGIVAGVRGSRGYMAPEWQNSG--LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFN  640 (702)
Q Consensus       563 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  640 (702)
                      +............|++.|+|||.+.+.  .++.++|||||||++|||++|+.||...........+.    ......   
T Consensus       179 ~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~----~~~~~~---  251 (322)
T d1vzoa_         179 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS----RRILKS---  251 (322)
T ss_dssp             CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH----HHHHHC---
T ss_pred             hcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH----HhcccC---
Confidence            755544445567799999999988654  56889999999999999999999997653322111111    111111   


Q ss_pred             cccccccCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 038002          641 KLVEEEVDKITLERMVKTGLLCIQDEPNLRP-----SMKNVIL  678 (702)
Q Consensus       641 ~~~~~~~~~~~~~~l~~li~~cL~~dP~~RP-----t~~evl~  678 (702)
                         ....+...+.++.+++.+||+.||++||     |++|+++
T Consensus       252 ---~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         252 ---EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             ---CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             ---CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence               1122334577899999999999999999     4788886

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-34  Score=300.56  Aligned_cols=227  Identities=20%  Similarity=0.135  Sum_probs=167.7

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------eeeEEEEEe------cCCeeEEEEec
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------ISSLLVYKH------RSSKKLLVYEF  490 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------i~~l~~~~~------~~~~~~lV~e~  490 (702)
                      .++..+.||+|+|  ||++....  ..||||                       |++++.++.      ++.+.+|||||
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey  100 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY  100 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEEC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEec
Confidence            3556678999988  99998764  778888                       777776663      34568999999


Q ss_pred             CCCCCHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC-cEEEecccceeecCCCC
Q 038002          491 MSKGSLADLLF--NLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW-RAKISDFGLAKLLMPNQ  567 (702)
Q Consensus       491 ~~~gsL~~~l~--~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~  567 (702)
                      ++++.+..+..  .....+++.++..++.||+.||+|||++   ||+||||||+|||++.++ .+||+|||++.......
T Consensus       101 ~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~  177 (350)
T d1q5ka_         101 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE  177 (350)
T ss_dssp             CSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTS
T ss_pred             cCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccchhhccCCc
Confidence            98764444332  2344699999999999999999999999   999999999999999775 89999999998764433


Q ss_pred             CceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHH----------Hhh--
Q 038002          568 TGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVY----------NCF--  634 (702)
Q Consensus       568 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~----------~~~--  634 (702)
                      .  .....|++.|+|||.+.+ ..++.++||||+||++|||++|+.||......   ..+.....          ...  
T Consensus       178 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~---~~l~~i~~~~g~~~~~~~~~~~~  252 (350)
T d1q5ka_         178 P--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV---DQLVEIIKVLGTPTREQIREMNP  252 (350)
T ss_dssp             C--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH---HHHHHHHHHHCCCCHHHHHHHCC
T ss_pred             c--cccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHH---HHHHHHHHHhCCChHHhhhhhcc
Confidence            2  334578999999997754 57899999999999999999999999654211   11111000          000  


Q ss_pred             --hcccccccc----ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          635 --VAGEFNKLV----EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       635 --~~~~~~~~~----~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                        .........    ........++.+.+|+.+||+.||++|||++|+++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             ---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             chhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              000000000    00112334667899999999999999999999996

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-33  Score=294.31  Aligned_cols=232  Identities=16%  Similarity=0.153  Sum_probs=166.3

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEec--------C
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHR--------S  481 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~--------~  481 (702)
                      .+++..++||+|+|  ||++....  ..||||                             |++++..+..        +
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            56677789999988  99988653  778888                             5566655433        5


Q ss_pred             CeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          482 SKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       482 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      .+.++||||+.++.+.... .....+++.++..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||++.
T Consensus        90 ~~~~iv~e~~~~~~~~~~~-~~~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~~~  165 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR  165 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHT-CTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             ceEEEEEeccCCCccchhh-hcccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecceee
Confidence            6789999999877665444 4444789999999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCC---ceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcc
Q 038002          562 LLMPNQT---GIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAG  637 (702)
Q Consensus       562 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  637 (702)
                      .+.....   .......||+.|+|||.+.+. .++.++||||+||++|||++|+.||.............. ........
T Consensus       166 ~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~-~~~~~~~~  244 (318)
T d3blha1         166 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ-LCGSITPE  244 (318)
T ss_dssp             ECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH-HHCCCCTT
T ss_pred             ecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHH-hcCCCChh
Confidence            7654332   122345699999999988654 689999999999999999999999964321111001100 00000000


Q ss_pred             cccc------------cccccc-------CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          638 EFNK------------LVEEEV-------DKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       638 ~~~~------------~~~~~~-------~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                      ....            ......       .......+++|+.+||+.||++|||++|+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         245 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             TSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence            0000            000000       01124467789999999999999999999964

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-33  Score=290.27  Aligned_cols=230  Identities=17%  Similarity=0.095  Sum_probs=175.4

Q ss_pred             cccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCCeeEEEEec
Q 038002          444 KVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSSKKLLVYEF  490 (702)
Q Consensus       444 ~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~~~~lV~e~  490 (702)
                      +++..++||+|+|  ||++....  ..||||                             |++++.++.+....++|+|+
T Consensus         3 ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~   82 (292)
T d1unla_           3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeee
Confidence            5667789999998  99988754  678888                             88889999999999999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCCCCce
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPNQTGI  570 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  570 (702)
                      +.+++|..++...+ .+++.++..++.|++.||+|||++   +|+||||||+|||++.++.+||+|||.++....... .
T Consensus        83 ~~~~~l~~~~~~~~-~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~-~  157 (292)
T d1unla_          83 CDQDLKKYFDSCNG-DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR-C  157 (292)
T ss_dssp             CSEEHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS-C
T ss_pred             cccccccccccccc-ccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccCCCc-c
Confidence            99999988876554 789999999999999999999999   999999999999999999999999999998644332 2


Q ss_pred             eeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhccccc---cc----
Q 038002          571 VAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAGEFN---KL----  642 (702)
Q Consensus       571 ~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----  642 (702)
                      .....+++.|+|||.+... .++.++|||||||++|||++|+.||.......+..................   ..    
T Consensus       158 ~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (292)
T d1unla_         158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK  237 (292)
T ss_dssp             CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred             ceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccc
Confidence            2334578889999988665 468999999999999999999999854322111111100000000000000   00    


Q ss_pred             ---------cccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          643 ---------VEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       643 ---------~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                               -.........+.+.+|+.+||+.||++|||++|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                     000123344567889999999999999999999986

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=3.1e-33  Score=294.25  Aligned_cols=228  Identities=19%  Similarity=0.203  Sum_probs=172.2

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------eeeEEEEEe--cCCeeEEEEec
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------ISSLLVYKH--RSSKKLLVYEF  490 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------i~~l~~~~~--~~~~~~lV~e~  490 (702)
                      .+.++..++||+|+|  ||++....  ..||+|                         |++++..++  .....++||||
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~  113 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH  113 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEEC
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEee
Confidence            355677789999998  99988653  778888                         888888876  45679999999


Q ss_pred             CCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCC-cEEEecccceeecCCCCCc
Q 038002          491 MSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSW-RAKISDFGLAKLLMPNQTG  569 (702)
Q Consensus       491 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~~~  569 (702)
                      +++++|..+.    ..+++.++..++.||+.||+|||++   ||+||||||+|||++.++ .+||+|||++........ 
T Consensus       114 ~~~~~L~~~~----~~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~-  185 (328)
T d3bqca1         114 VNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-  185 (328)
T ss_dssp             CCSCBGGGTT----TSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCC-
T ss_pred             cCCCcHHHHh----cCCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccceeccCCCc-
Confidence            9999998764    3689999999999999999999999   999999999999998655 699999999987654332 


Q ss_pred             eeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHH------Hhhh-------
Q 038002          570 IVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVY------NCFV-------  635 (702)
Q Consensus       570 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~------~~~~-------  635 (702)
                       .....+|+.|+|||.+.+. .++.++||||+||++|||++|+.||.......+.........      ....       
T Consensus       186 -~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~  264 (328)
T d3bqca1         186 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD  264 (328)
T ss_dssp             -CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred             -ccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccC
Confidence             3455789999999987654 579999999999999999999999975532221111100000      0000       


Q ss_pred             -----------ccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 038002          636 -----------AGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL  678 (702)
Q Consensus       636 -----------~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~  678 (702)
                                 ................+.++.+||.+||+.||++|||++|+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             GGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                       0000111111122334567899999999999999999999986

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=3.3e-33  Score=296.24  Aligned_cols=234  Identities=20%  Similarity=0.163  Sum_probs=170.5

Q ss_pred             cccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEecCC------
Q 038002          442 NDKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHRSS------  482 (702)
Q Consensus       442 ~~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~~~------  482 (702)
                      ++.++..++||+|+|  ||++....  ..||||                             |++++.++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            456777789999999  99998653  778887                             778888877654      


Q ss_pred             eeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          483 KKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       483 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      +.|+||||+ +.+|..+++..  ++++..++.++.||+.||+|||++   ||+||||||+|||++.++.+||+|||+++.
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~  170 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ  170 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             eEEEEEecc-cccHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccceec
Confidence            579999999 66888887653  699999999999999999999999   999999999999999999999999999987


Q ss_pred             cCCCCCceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHH-------HHHhh
Q 038002          563 LMPNQTGIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTW-------VYNCF  634 (702)
Q Consensus       563 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~-------~~~~~  634 (702)
                      ....    .....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||...............       .....
T Consensus       171 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (346)
T d1cm8a_         171 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL  246 (346)
T ss_dssp             CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTC
T ss_pred             cCCc----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhh
Confidence            6432    234578999999998865 46789999999999999999999999654211100000000       00000


Q ss_pred             ----------hccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhCCcC
Q 038002          635 ----------VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM--LEGTME  685 (702)
Q Consensus       635 ----------~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~--Le~~~~  685 (702)
                                ..................+.+.+|+.+||+.||++|||++|+++.  ++++.+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~  309 (346)
T d1cm8a_         247 QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD  309 (346)
T ss_dssp             SCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             cchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCC
Confidence                      000000000011223345678899999999999999999999985  666543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=4e-33  Score=295.29  Aligned_cols=235  Identities=19%  Similarity=0.205  Sum_probs=167.8

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh----------------------------eeeEEEEEecCC----eeEE
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA----------------------------ISSLLVYKHRSS----KKLL  486 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk----------------------------i~~l~~~~~~~~----~~~l  486 (702)
                      .+++..++||+|+|  ||++....  ..||||                            |++++..+....    ..++
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            45677789999998  99987653  778888                            666776665433    2345


Q ss_pred             EEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecCCC
Q 038002          487 VYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLMPN  566 (702)
Q Consensus       487 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  566 (702)
                      +++++.+|+|.+++...  ++++.+++.++.||+.||+|||++   ||+||||||+|||++.++.+||+|||++......
T Consensus        88 l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~  162 (345)
T d1pmea_          88 LVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD  162 (345)
T ss_dssp             EEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred             EEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceeeccCC
Confidence            55667799999999754  689999999999999999999999   9999999999999999999999999999876443


Q ss_pred             CC--ceeeceeccccccCcccccC-CCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhh---------
Q 038002          567 QT--GIVAGVRGSRGYMAPEWQNS-GLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCF---------  634 (702)
Q Consensus       567 ~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~---------  634 (702)
                      ..  .......||+.|+|||++.. ..++.++||||+||++|||++|+.||....... ............         
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  241 (345)
T d1pmea_         163 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDLNCII  241 (345)
T ss_dssp             GCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHTCC
T ss_pred             CccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHH-HHHHHhhhccCCChhhhhhhh
Confidence            22  12345679999999998854 567899999999999999999999996542111 100000000000         


Q ss_pred             ---------hccccccccccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HhCC
Q 038002          635 ---------VAGEFNKLVEEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM--LEGT  683 (702)
Q Consensus       635 ---------~~~~~~~~~~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~--Le~~  683 (702)
                               .................+.++.+++.+||+.||++|||++|+++.  |+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~  301 (345)
T d1pmea_         242 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  301 (345)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             hhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence                     000000000001112234578899999999999999999999975  5544

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.1e-32  Score=289.53  Aligned_cols=225  Identities=20%  Similarity=0.196  Sum_probs=161.7

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEe------cCCe
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKH------RSSK  483 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~------~~~~  483 (702)
                      ++++..++||+|+|  ||++....  ..||||                             |++++..+.      +..+
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            45777789999998  99998653  778887                             777777775      4578


Q ss_pred             eEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          484 KLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                      .|+||||+.++.+. .+.   ..+++.+++.++.||+.||+|||++   ||+||||||+|||++.++.+|++|||+++..
T Consensus        97 ~~iv~Ey~~~~l~~-~~~---~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~~~~  169 (355)
T d2b1pa1          97 VYLVMELMDANLCQ-VIQ---MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  169 (355)
T ss_dssp             EEEEEECCSEEHHH-HHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             eEEEEeccchHHHH-hhh---cCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhhhcc
Confidence            99999999765544 442   2589999999999999999999999   9999999999999999999999999998865


Q ss_pred             CCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHH------------
Q 038002          564 MPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVY------------  631 (702)
Q Consensus       564 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~------------  631 (702)
                      ....  ......+|+.|+|||++.+..++.++||||+||+++||++|+.||.....   .........            
T Consensus       170 ~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~---~~~~~~i~~~~~~~~~~~~~~  244 (355)
T d2b1pa1         170 GTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY---IDQWNKVIEQLGTPCPEFMKK  244 (355)
T ss_dssp             -------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHHHCCCCHHHHTT
T ss_pred             cccc--ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCH---HHHHHHHHHhccCCCHHHHHH
Confidence            4332  23456789999999999999999999999999999999999999964421   110000000            


Q ss_pred             -----Hhhhcc-------cccccc-------ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 038002          632 -----NCFVAG-------EFNKLV-------EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNVILM  679 (702)
Q Consensus       632 -----~~~~~~-------~~~~~~-------~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~~  679 (702)
                           ......       ......       ........+..+.+|+.+||+.||++|||++|+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             SCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                 000000       000000       011234567789999999999999999999999864

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.3e-32  Score=286.08  Aligned_cols=229  Identities=17%  Similarity=0.168  Sum_probs=166.3

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-----------------------------eeeEEEEEec-----CCee
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-----------------------------ISSLLVYKHR-----SSKK  484 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-----------------------------i~~l~~~~~~-----~~~~  484 (702)
                      ++++..++||+|+|  ||++....  ..||||                             |++++..+..     +...
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~   97 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND   97 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCC
T ss_pred             CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCce
Confidence            45677788999988  99987653  778887                             6677777653     3344


Q ss_pred             EEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeecC
Q 038002          485 LLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLLM  564 (702)
Q Consensus       485 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~  564 (702)
                      ++||+++.+|+|.+++...  ++++.++..++.||+.||+|||++   ||+||||||+|||++.++.+|++|||++....
T Consensus        98 ~~i~~~~~gg~L~~~~~~~--~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~  172 (348)
T d2gfsa1          98 VYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTD  172 (348)
T ss_dssp             CEEEEECCSEEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----CCT
T ss_pred             EEEEEeecCCchhhhcccc--cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhcccC
Confidence            6677788899999999643  699999999999999999999999   99999999999999999999999999997542


Q ss_pred             CCCCceeeceeccccccCcccccCC-CCCccccccchhHhHHHhhhCCcCCcCCCCCcchhhhHHHHHHhhhcc------
Q 038002          565 PNQTGIVAGVRGSRGYMAPEWQNSG-LITVKSDVYSFGVVLLEIICCRSNFEVNVSTADEVLLSTWVYNCFVAG------  637 (702)
Q Consensus       565 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~------  637 (702)
                      .    ......|++.|+|||...+. .++.++|||||||++|+|++|+.||......    .............      
T Consensus       173 ~----~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~----~~~~~i~~~~~~~~~~~~~  244 (348)
T d2gfsa1         173 D----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI----DQLKLILRLVGTPGAELLK  244 (348)
T ss_dssp             G----GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCHHHHT
T ss_pred             c----ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHH----HHHHHHHHhcCCCChHHhh
Confidence            2    23345689999999976654 5689999999999999999999999654211    1111010000000      


Q ss_pred             ------------ccccccc---cccCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhCCc
Q 038002          638 ------------EFNKLVE---EEVDKITLERMVKTGLLCIQDEPNLRPSMKNVIL--MLEGTM  684 (702)
Q Consensus       638 ------------~~~~~~~---~~~~~~~~~~l~~li~~cL~~dP~~RPt~~evl~--~Le~~~  684 (702)
                                  .......   .......+..+.+||.+||+.||++|||++|+++  .+.+..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~  308 (348)
T d2gfsa1         245 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  308 (348)
T ss_dssp             TCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             hccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCC
Confidence                        0000000   0111223567889999999999999999999997  455543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2e-29  Score=268.63  Aligned_cols=248  Identities=19%  Similarity=0.097  Sum_probs=171.1

Q ss_pred             ccccccceEEEeEE--EEEeeeeh--hhhHhh-------------------------------------eeeEEEEE--e
Q 038002          443 DKVNDKRKLLTVLA--GCLGSITF--LCFLIA-------------------------------------ISSLLVYK--H  479 (702)
Q Consensus       443 ~~~~~~~~l~~g~~--v~~~~~~~--~~~avk-------------------------------------i~~l~~~~--~  479 (702)
                      .+++..++||+|+|  ||++....  ..||||                                     |++++.++  +
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            35777899999988  99997653  677877                                     44445444  3


Q ss_pred             cCCeeEEEEecCCCCCHHHH--hhcCCCCCCHHHHHHHHHHHHHHHHhhhh-cCCCCeEecCCCCCcEEEeCCCc-----
Q 038002          480 RSSKKLLVYEFMSKGSLADL--LFNLETRPLWRDRVRIALDVARGLLYLHD-ECEVQIIHCDIKLRNILIDDSWR-----  551 (702)
Q Consensus       480 ~~~~~~lV~e~~~~gsL~~~--l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~-----  551 (702)
                      .....+++|+++..+.....  ........++..+..++.||+.||+|||+ .   ||+||||||+|||++.++.     
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~---~IvHrDlKp~NIll~~~~~~~~~~  169 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENLI  169 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEEEEETTTTEE
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc---CcccccCChhHeeeeccCcccccc
Confidence            45667777777755443222  22334468899999999999999999998 6   9999999999999976653     


Q ss_pred             -EEEecccceeecCCCCCceeeceeccccccCcccccCCCCCccccccchhHhHHHhhhCCcCCcCCCCCcch---hhhH
Q 038002          552 -AKISDFGLAKLLMPNQTGIVAGVRGSRGYMAPEWQNSGLITVKSDVYSFGVVLLEIICCRSNFEVNVSTADE---VLLS  627 (702)
Q Consensus       552 -~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~---~~~~  627 (702)
                       ++++|||.+......    .....||+.|+|||.+....++.++||||+||+++||++|+.||.........   ..+.
T Consensus       170 ~~kl~dfg~s~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~  245 (362)
T d1q8ya_         170 QIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA  245 (362)
T ss_dssp             EEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred             eeeEeecccccccccc----cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHH
Confidence             999999999865322    23456899999999999899999999999999999999999999754221110   0010


Q ss_pred             HHHHH-------hhhc--------------cccccc--------c--ccccCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 038002          628 TWVYN-------CFVA--------------GEFNKL--------V--EEEVDKITLERMVKTGLLCIQDEPNLRPSMKNV  676 (702)
Q Consensus       628 ~~~~~-------~~~~--------------~~~~~~--------~--~~~~~~~~~~~l~~li~~cL~~dP~~RPt~~ev  676 (702)
                      .....       ....              ..+...        .  ...........+.+|+.+||+.||++|||++|+
T Consensus       246 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~  325 (362)
T d1q8ya_         246 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL  325 (362)
T ss_dssp             HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred             HHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            00000       0000              000000        0  002346678899999999999999999999999


Q ss_pred             HHH--HhC---CcCCCCCCCCCCCCC
Q 038002          677 ILM--LEG---TMEIPILAFPPLSHV  697 (702)
Q Consensus       677 l~~--Le~---~~~~~~p~~P~~~~~  697 (702)
                      ++.  ++.   ..++..|+.|-...-
T Consensus       326 L~Hp~f~~~~~~~~~~~p~~~~~~~~  351 (362)
T d1q8ya_         326 VNHPWLKDTLGMEEIRVPDRELYGSG  351 (362)
T ss_dssp             HTCGGGTTCTTCTTCCCTTSCTTCBS
T ss_pred             hcCcccCCCCCcccCCCCCcccCCCC
Confidence            984  543   334555665554433

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.86  E-value=9.9e-22  Score=170.82  Aligned_cols=112  Identities=19%  Similarity=0.342  Sum_probs=95.8

Q ss_pred             ccccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEcC
Q 038002           27 KSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTE  106 (702)
Q Consensus        27 ~~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~~  106 (702)
                      +|+|.|||.|.++  ++|+  +|.|+|+|+.+||   |.|+.    ..++||.|+++.+  ..++.|.|+.||+|+|++.
T Consensus         1 tDtL~~gq~L~~g--~~l~--~g~~~l~~q~DGN---Lvly~----~~~~vW~s~~~~~--~~~~~l~l~~dGnLvl~~~   67 (112)
T d1xd5a_           1 SDRLNSGHQLDTG--GSLA--EGGYLFIIQNDCN---LVLYD----NNRAVWASGTNGK--ASGCVLKMQNDGNLVIYSG   67 (112)
T ss_dssp             CCEEETTEEECTT--CEEE--ETTEEEEECTTSC---EEEEE----TTEEEEECCCTTS--CSSEEEEECTTSCEEEEET
T ss_pred             CCEecCCCEecCC--CEEE--ECCEEEEEcCCCC---EEEEc----CCcEEEEccCccC--CCCcEEEEeccccEEEEec
Confidence            4899999999987  7887  4889999999997   34444    3689999999876  5567899999999999986


Q ss_pred             CCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCcc
Q 038002          107 ESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTD  152 (702)
Q Consensus       107 ~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTD  152 (702)
                       +..+|++++....+..+|+|+|+||||||+.++.++|||+.+|+|
T Consensus        68 -~~~~w~s~t~~~~~~~~l~L~ddGNlvly~~~~~~~W~S~t~~~n  112 (112)
T d1xd5a_          68 -SRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHTNVGN  112 (112)
T ss_dssp             -TEEEEECCCCCSCCCCEEEECTTSCEEEECTTSCEEEECCCCCCC
T ss_pred             -CCeEEEEeeccCCCceEEEEcCCCCEEEECCCCcEEecCCCccCC
Confidence             567888887655667899999999999999999999999999985

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=99.83  E-value=1.1e-20  Score=162.62  Aligned_cols=107  Identities=18%  Similarity=0.250  Sum_probs=91.3

Q ss_pred             ccccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEcC
Q 038002           27 KSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTE  106 (702)
Q Consensus        27 ~~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~~  106 (702)
                      +++|.+||.|.+|  ++|.  +|.|.|.|+.+||   |.||.    ..++||.||++.|  +..+.|.|+.||+|+|+++
T Consensus         1 ~~~L~~g~~L~~G--~~l~--ng~~~l~~q~DGN---Lvly~----~~~~vW~s~~~~~--~~~~~l~l~~~Gnlvl~~~   67 (108)
T d1jpca_           1 DNILYSGETLSTG--EFLN--YGSFVFIMQEDCN---LVLYD----VDKPIWATNTGGL--SRSCFLSMQTDGNLVVYNP   67 (108)
T ss_dssp             CCEEETTEEECTT--CEEE--ETTEEEEECTTSC---EEEEE----TTEEEEECCCTTS--CSSCEEEECTTSCEEEECT
T ss_pred             CCCccCCCEecCC--CEEE--cCCEEEEECCCCe---EEEEe----CCceeeEeCCCCC--CCccEEEEeccceEEEECC
Confidence            3789999999877  7775  6999999999997   45554    3578999999876  6677899999999999999


Q ss_pred             CCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCC
Q 038002          107 ESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFST  149 (702)
Q Consensus       107 ~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~  149 (702)
                      +|.++|+|++.......+|+|+||||||||+.   .+||||+|
T Consensus        68 ~g~~vWsS~t~~~~~~~~l~L~ddGNlVly~~---~~W~S~t~  107 (108)
T d1jpca_          68 SNKPIWASNTGGQNGNYVCILQKDRNVVIYGT---DRWATGTH  107 (108)
T ss_dssp             TCCEEEECCCCCSCSCEEEEECTTSCEEEEEC---CCCCCCCC
T ss_pred             CccceEEccccCCCCcEEEEEcCCCCEEEeCC---CcccCCCC
Confidence            99999999876556677899999999999964   59999987

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.81  E-value=6.2e-20  Score=157.80  Aligned_cols=107  Identities=18%  Similarity=0.275  Sum_probs=90.4

Q ss_pred             cccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEcCC
Q 038002           28 STISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEE  107 (702)
Q Consensus        28 ~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~~~  107 (702)
                      ++|.+||.|.++  ++|+  +|.|.|+|+.++|.   .++.    ..++||.||++.|. ...+.|.|+.||+|+|+|.+
T Consensus         2 ~~L~~g~~L~~g--~~l~--~g~~~l~~q~dgnL---vl~~----~~~~vW~ant~~~~-~~~~~l~l~~dGnLvl~~~~   69 (109)
T d1kj1a_           2 NLLTNGEGLYAG--QSLD--VEPYHFIMQEDCNL---VLYD----HSTSVWASNTGILG-KKGCKAVLQSDGNFVVYDAE   69 (109)
T ss_dssp             CEEETTCEEETT--CEEE--ETTEEEEECTTSCE---EEEE----TTEEEEECCCCCTT-CCCCEEEECTTSCEEEECSS
T ss_pred             CCccCCCEEeCC--CEEE--eCCEEEEecCCCeE---EEEe----CCEEEEEeCCCCCC-ceeEEEEEcCCceEEEEeCC
Confidence            789999999987  7776  48899999998874   3332    35899999999886 56788999999999999999


Q ss_pred             CCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCC
Q 038002          108 SKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFST  149 (702)
Q Consensus       108 ~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~  149 (702)
                      |.++|+|++....+.++|+|+||||||||+.   .+|||+-|
T Consensus        70 g~~vW~s~t~~~~~~~~l~L~ddGNlvly~~---~~W~S~t~  108 (109)
T d1kj1a_          70 GRSLWASHSVRGNGNYVLVLQEDGNVVIYGS---DIWSTGTY  108 (109)
T ss_dssp             SCEEEECCCCCCSSCCEEEECTTSCEEEECC---EEEECCCC
T ss_pred             CcEEEEEeeECCCCCEEEEEeCCCcEEEECC---CEecCCCc
Confidence            9999999876556677899999999999953   69999864

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.78  E-value=2.5e-19  Score=156.57  Aligned_cols=103  Identities=20%  Similarity=0.240  Sum_probs=89.8

Q ss_pred             EEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEcCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEe
Q 038002           65 GIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIW  144 (702)
Q Consensus        65 gIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~W  144 (702)
                      -|||.++++++.+|+++++.+++....+|.|+.||||+|++. +.++|++++.......+|+|+++|||||++.++.++|
T Consensus        11 ~il~~~~~~~~~~~~l~~~q~l~~g~y~L~~q~DGNLvL~~~-~~~vW~s~t~~~~~~~~~~l~~~GnLvl~d~~~~~lW   89 (120)
T d1dlpa2          11 SILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDR-DDRVWSTNTAGKGTGCRAVLQPNGRMDVLTNQNIAVW   89 (120)
T ss_dssp             EECCCC--CCCCCCEECSSCCCBCSSCEEEEETTTEEEEEBT-TBCCSCCCCCSSCSSCEEEEETTTEEEEEETTTEEEE
T ss_pred             eEEEcCCCCCCcccEEcCCCeeEcCCEEEEEcCCCcEEEecC-CcEEEEEccccCCCcEEEEEeCCeeEEEEcCCCCEEE
Confidence            389999999999999999999977778999999999999975 6789999876555677899999999999999999999


Q ss_pred             eecCCCcccccCCCccCCCCeEEeeccCCCCcccceEeeeccCCceeee
Q 038002          145 ESFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLY  193 (702)
Q Consensus       145 qSFd~PTDTlLpgq~l~~~~~L~S~~s~~dps~G~fsl~l~~~g~~~~~  193 (702)
                      |||.                         +.++|.|.|.|++||++++|
T Consensus        90 ~S~t-------------------------~~~~~~~~l~Lq~DGnlvlY  113 (120)
T d1dlpa2          90 TSGN-------------------------SRSAGRYVFVLQPDRNLAIY  113 (120)
T ss_dssp             ECCC-------------------------CCSSSCCEEEECSSSCEEEE
T ss_pred             EeCC-------------------------CCCCCcEEEEECCCCcEEEe
Confidence            9974                         34578899999999999998

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.70  E-value=3.5e-18  Score=147.56  Aligned_cols=111  Identities=20%  Similarity=0.279  Sum_probs=96.2

Q ss_pred             EEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEcCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEee
Q 038002           66 IWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWE  145 (702)
Q Consensus        66 Iw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~Wq  145 (702)
                      |||.-.++.+..|..+.+.++.....+|.|+.||||||++ ++.++|++++. +..++.+.|+++|||||++.++.+|||
T Consensus         3 ~~~~~~~~~~~~~tl~~~~~l~~g~~~l~~q~DGNLvL~~-~~~~vW~s~t~-~~~~~~l~l~~dGNLvl~d~~~~~vWs   80 (115)
T d1dlpa1           3 ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFD-SDVRVWASNTA-GATGCRAVLQSDGLLVILTAQNTIRWS   80 (115)
T ss_dssp             CCBCSSSSSCSCSCCCTTCEECSTTEEEEECTTSCEEEEE-SSSEEECCCCC-SCSCCBCCBCSSSCBCCBCTTTCCSCC
T ss_pred             EEEecCCCCCCcceecCCCcEEcCCEEEEECCCCeEEEEc-CCeeEEEcccC-CCCceEEEEeccCCEEEEccCCCEEEE
Confidence            7888888888889999999997778899999999999997 56789999874 456788999999999999999999999


Q ss_pred             ecCCCcccccCCCccCCCCeEEeeccCCCCcccceEeeeccCCceeeeeccccccccceeecCCcc
Q 038002          146 SFSTPTDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTD  211 (702)
Q Consensus       146 SFd~PTDTlLpgq~l~~~~~L~S~~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~~  211 (702)
                      |+.                         +.+.|.|.|.|++||++++|-        .++|++++.
T Consensus        81 S~t-------------------------~~~~g~y~l~Lq~DGNlvlY~--------~~~Wssgt~  113 (115)
T d1dlpa1          81 SGT-------------------------KGSIGNYVLVLQPDRTVTIYG--------PGLWDSGTS  113 (115)
T ss_dssp             CCC-------------------------CCCSSCCEEEECSSSCEEEEC--------SEEEECSCC
T ss_pred             cCC-------------------------CCCCCCEEEEECCCCcEEEeC--------CCeecCCCC
Confidence            863                         346899999999999999871        479999875

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.63  E-value=7.1e-16  Score=133.86  Aligned_cols=103  Identities=16%  Similarity=0.204  Sum_probs=84.4

Q ss_pred             cccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEcCC
Q 038002           28 STISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTEE  107 (702)
Q Consensus        28 ~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~~~  107 (702)
                      .+|.+||+|.      ..+..|.|.|.|+.+||.   .+ |.   ..++||.+|+..+  +..+.|.|+.||+|+|+|.+
T Consensus        15 ~~l~~~q~l~------~~~~~~~y~l~mQ~DGNL---VL-y~---~~~~vWssnt~~~--~~~~~l~l~~dGnLvL~d~~   79 (119)
T d1b2pa_          15 QILHATESLE------ILFGTHVYRFIMQTDCNL---VL-YD---NNNPIWATNTGGL--GNGCRAVLQPDGVLVVITNE   79 (119)
T ss_dssp             CEEETTCEEE------EEETTEEEEEEECTTSCE---EE-EE---TTEEEEECCCTTS--CSSCEEEECTTSCEEEECTT
T ss_pred             CEEeCCCeEE------EecCCceEEEEECCCCcE---EE-EE---CCeEEEEecCCCC--CcceEEEEEeCCCEEEECCC
Confidence            5677777763      457899999999999984   22 22   3678999999765  55689999999999999999


Q ss_pred             CCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecC
Q 038002          108 SKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFS  148 (702)
Q Consensus       108 ~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd  148 (702)
                      |.++|++++....+..+|+|+||||||||+   .++|||-.
T Consensus        80 g~~vWsS~t~~~~~~~~l~Lq~DGNlvlYg---~~~W~S~T  117 (119)
T d1b2pa_          80 NVTVWQSPVAGKAGHYVLVLQPDRNVVIYG---DALWATQT  117 (119)
T ss_dssp             CCEEEECSCCCCSSCEEEEECTTSCEEEEE---SEEEECCC
T ss_pred             CcEEEECCCcCCCCceEEEEcCCCCEEEEC---CCEeccCC
Confidence            999999987655667789999999999995   47999953

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.53  E-value=1.3e-15  Score=145.41  Aligned_cols=99  Identities=13%  Similarity=0.097  Sum_probs=72.6

Q ss_pred             eEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCCeEecCCCCCcEEEeCCCcEEEecccceeec
Q 038002          484 KLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDECEVQIIHCDIKLRNILIDDSWRAKISDFGLAKLL  563 (702)
Q Consensus       484 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~  563 (702)
                      .++||||+++..+.+        ++...+..++.|++++|+|||++   ||+||||||+|||++++ .++|+|||.|...
T Consensus        85 ~~lvme~~~~~~~~~--------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~~~liDFG~a~~~  152 (191)
T d1zara2          85 NAVLMELIDAKELYR--------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-GIWIIDFPQSVEV  152 (191)
T ss_dssp             TEEEEECCCCEEGGG--------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-EEEECCCTTCEET
T ss_pred             CEEEEEeeccccccc--------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-CEEEEECCCcccC
Confidence            379999998865543        33445667899999999999999   99999999999999965 5899999999865


Q ss_pred             CCCCCceeeceeccccccCc------ccccCCCCCccccccchhHhH
Q 038002          564 MPNQTGIVAGVRGSRGYMAP------EWQNSGLITVKSDVYSFGVVL  604 (702)
Q Consensus       564 ~~~~~~~~~~~~gt~~y~aP------E~~~~~~~~~~~DiwSlGvil  604 (702)
                      ......         .|+..      |. ..+.|+.++|+||+.--+
T Consensus       153 ~~~~~~---------~~l~rd~~~~~~~-f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         153 GEEGWR---------EILERDVRNIITY-FSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             TSTTHH---------HHHHHHHHHHHHH-HHHHHCCCCCHHHHHHHH
T ss_pred             CCCCcH---------HHHHHHHHHHHHH-HcCCCCCcccHHHHHHHH
Confidence            432211         11111      11 135678899999975443

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.44  E-value=5.4e-14  Score=120.94  Aligned_cols=99  Identities=16%  Similarity=0.195  Sum_probs=79.2

Q ss_pred             cccccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEc
Q 038002           26 LKSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKT  105 (702)
Q Consensus        26 ~~~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~  105 (702)
                      ..++|.+||+|.          +|.|.|.|+.+||.   .++.    ...+||.++...   ...+.+.|+.||||||+|
T Consensus        13 ~~~tl~~~~~l~----------~g~~~l~~q~DGNL---vL~~----~~~~vW~s~t~~---~~~~~l~l~~dGNLvl~d   72 (115)
T d1dlpa1          13 HPQTLHAAQSLE----------LSSFRFTMQSDCNL---VLFD----SDVRVWASNTAG---ATGCRAVLQSDGLLVILT   72 (115)
T ss_dssp             SCSCCCTTCEEC----------STTEEEEECTTSCE---EEEE----SSSEEECCCCCS---CSCCBCCBCSSSCBCCBC
T ss_pred             CcceecCCCcEE----------cCCEEEEECCCCeE---EEEc----CCeeEEEcccCC---CCceEEEEeccCCEEEEc
Confidence            346677777664          46699999999973   3443    357899998753   456789999999999999


Q ss_pred             CCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeec
Q 038002          106 EESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESF  147 (702)
Q Consensus       106 ~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSF  147 (702)
                      .++.++|++.+....+..+++|++|||||||+   ..+|+|-
T Consensus        73 ~~~~~vWsS~t~~~~g~y~l~Lq~DGNlvlY~---~~~Wssg  111 (115)
T d1dlpa1          73 AQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYG---PGLWDSG  111 (115)
T ss_dssp             TTTCCSCCCCCCCCSSCCEEEECSSSCEEEEC---SEEEECS
T ss_pred             cCCCEEEEcCCCCCCCCEEEEECCCCcEEEeC---CCeecCC
Confidence            99999999988656677789999999999994   4799984

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.34  E-value=1.9e-12  Score=111.83  Aligned_cols=86  Identities=23%  Similarity=0.353  Sum_probs=70.6

Q ss_pred             eEEEccCCcEEEEcCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCccCCCCeEEeecc
Q 038002           92 TLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSSVT  171 (702)
Q Consensus        92 ~l~~~~~g~L~l~~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~L~S~~s  171 (702)
                      +|.|+.||||||++. +.++|++++......+.+.|+++|||||++.++.+||+|.-                       
T Consensus        33 ~l~mQ~DGNLVLy~~-~~~vWssnt~~~~~~~~l~l~~dGnLvL~d~~g~~vWsS~t-----------------------   88 (119)
T d1b2pa_          33 RFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSPV-----------------------   88 (119)
T ss_dssp             EEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECSC-----------------------
T ss_pred             EEEECCCCcEEEEEC-CeEEEEecCCCCCcceEEEEEeCCCEEEECCCCcEEEECCC-----------------------
Confidence            689999999999964 56899998754455688999999999999999999998721                       


Q ss_pred             CCCCcccceEeeeccCCceeeeeccccccccceeecCCcc
Q 038002          172 ETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTD  211 (702)
Q Consensus       172 ~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~~  211 (702)
                        .-+.|.|.+.|++||++++|-        .+.|++++.
T Consensus        89 --~~~~~~~~l~Lq~DGNlvlYg--------~~~W~S~T~  118 (119)
T d1b2pa_          89 --AGKAGHYVLVLQPDRNVVIYG--------DALWATQTV  118 (119)
T ss_dssp             --CCCSSCEEEEECTTSCEEEEE--------SEEEECCCC
T ss_pred             --cCCCCceEEEEcCCCCEEEEC--------CCEeccCCc
Confidence              124578999999999999982        368998863

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=99.27  E-value=7.3e-12  Score=106.60  Aligned_cols=87  Identities=29%  Similarity=0.447  Sum_probs=70.3

Q ss_pred             CceEEEccCCcEEEEcCCCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCccCCCCeEEee
Q 038002           90 NATLALTMDGKLILKTEESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLSS  169 (702)
Q Consensus        90 ~~~l~~~~~g~L~l~~~~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~L~S~  169 (702)
                      .-+|.|+.||||||++ .+.+||++++........++|+++|||||++.++.+||+|                       
T Consensus        20 ~~~l~~q~DGNLvly~-~~~~vW~s~~~~~~~~~~l~l~~~Gnlvl~~~~g~~vWsS-----------------------   75 (108)
T d1jpca_          20 SFVFIMQEDCNLVLYD-VDKPIWATNTGGLSRSCFLSMQTDGNLVVYNPSNKPIWAS-----------------------   75 (108)
T ss_dssp             TEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEEC-----------------------
T ss_pred             CEEEEECCCCeEEEEe-CCceeeEeCCCCCCCccEEEEeccceEEEECCCccceEEc-----------------------
Confidence            3579999999999996 5678999987544456789999999999999999999987                       


Q ss_pred             ccCCCCcccceEeeeccCCceeeeeccccccccceeecCCc
Q 038002          170 VTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGT  210 (702)
Q Consensus       170 ~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~  210 (702)
                        ....+.+.|.+.|+.||++++|-        .+.|++++
T Consensus        76 --~t~~~~~~~~l~L~ddGNlVly~--------~~~W~S~t  106 (108)
T d1jpca_          76 --NTGGQNGNYVCILQKDRNVVIYG--------TDRWATGT  106 (108)
T ss_dssp             --CCCCSCSCEEEEECTTSCEEEEE--------CCCCCCCC
T ss_pred             --cccCCCCcEEEEEcCCCCEEEeC--------CCcccCCC
Confidence              11224578899999999999982        24688764

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.23  E-value=8.9e-12  Score=107.95  Aligned_cols=98  Identities=13%  Similarity=0.212  Sum_probs=75.3

Q ss_pred             ccccCCCCccccCCCCeeEcCCCeEEEEEEeCCCceEEEEEeecCCCCeEEEEecCCCCCCCCCceEEEccCCcEEEEcC
Q 038002           27 KSTISLGSSLSPSGQHSWNSSSGLFQFGFYKQGSGYSLGIWLVTSPNITVVWTANRDEQPMPSNATLALTMDGKLILKTE  106 (702)
Q Consensus        27 ~~~l~~g~~l~~~~~~~~~s~~g~f~lgF~~~~~~~~lgIw~~~~~~~~~vW~An~~~~~~~~~~~l~~~~~g~L~l~~~  106 (702)
                      ..+|.++|+|.+          |.|.|.|..+||.   .|+-    ...+||.++....  +..+.+.|+.+|||||+|.
T Consensus        23 ~~~l~~~q~l~~----------g~y~L~~q~DGNL---vL~~----~~~~vW~s~t~~~--~~~~~~~l~~~GnLvl~d~   83 (120)
T d1dlpa2          23 PQTLHATQSLQL----------SPYRLSMETDCNL---VLFD----RDDRVWSTNTAGK--GTGCRAVLQPNGRMDVLTN   83 (120)
T ss_dssp             CCEECSSCCCBC----------SSCEEEEETTTEE---EEEB----TTBCCSCCCCCSS--CSSCEEEEETTTEEEEEET
T ss_pred             ccEEcCCCeeEc----------CCEEEEEcCCCcE---EEec----CCcEEEEEccccC--CCcEEEEEeCCeeEEEEcC
Confidence            356677777654          4588888877753   3432    3467899886432  5667899999999999999


Q ss_pred             CCCeeeeeccccCCcceeEEEecCcCEEEeecCCceEeee
Q 038002          107 ESKEKPIADLVFDEPASFASMLDSGNFVLYSNRSGIIWES  146 (702)
Q Consensus       107 ~~~~~w~~~~~~~~~~~~~~l~d~Gnlvl~~~~~~~~WqS  146 (702)
                      ++.++|+|.+....+..+++|++|||||||+   ..+|.|
T Consensus        84 ~~~~lW~S~t~~~~~~~~l~Lq~DGnlvlY~---~~~W~t  120 (120)
T d1dlpa2          84 QNIAVWTSGNSRSAGRYVFVLQPDRNLAIYG---GALWTT  120 (120)
T ss_dssp             TTEEEEECCCCCSSSCCEEEECSSSCEEEEC---CCCCBC
T ss_pred             CCCEEEEeCCCCCCCcEEEEECCCCcEEEeC---CCcccC
Confidence            9999999998655667789999999999994   468876

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.20  E-value=3.5e-11  Score=102.37  Aligned_cols=88  Identities=27%  Similarity=0.494  Sum_probs=70.2

Q ss_pred             CceEEEccCCcEEEEcCCCCeeeeecccc-CCcceeEEEecCcCEEEeecCCceEeeecCCCcccccCCCccCCCCeEEe
Q 038002           90 NATLALTMDGKLILKTEESKEKPIADLVF-DEPASFASMLDSGNFVLYSNRSGIIWESFSTPTDTILGGQSLENGEHLLS  168 (702)
Q Consensus        90 ~~~l~~~~~g~L~l~~~~~~~~w~~~~~~-~~~~~~~~l~d~Gnlvl~~~~~~~~WqSFd~PTDTlLpgq~l~~~~~L~S  168 (702)
                      .-.|.|+.||||+|+. ++.+||++++.. ......+.|+++|||||++.++.+||+|=                     
T Consensus        20 ~~~l~~q~dgnLvl~~-~~~~vW~ant~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~s~---------------------   77 (109)
T d1kj1a_          20 PYHFIMQEDCNLVLYD-HSTSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASH---------------------   77 (109)
T ss_dssp             TEEEEECTTSCEEEEE-TTEEEEECCCCCTTCCCCEEEECTTSCEEEECSSSCEEEECC---------------------
T ss_pred             CEEEEecCCCeEEEEe-CCEEEEEeCCCCCCceeEEEEEcCCceEEEEeCCCcEEEEEe---------------------
Confidence            4678999999999996 567899988753 23467899999999999999999999981                     


Q ss_pred             eccCCCCcccceEeeeccCCceeeeeccccccccceeecCCcc
Q 038002          169 SVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTD  211 (702)
Q Consensus       169 ~~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~~  211 (702)
                          ...+.|.|.+.|+++|++++|-        .+.|.+++.
T Consensus        78 ----t~~~~~~~~l~L~ddGNlvly~--------~~~W~S~t~  108 (109)
T d1kj1a_          78 ----SVRGNGNYVLVLQEDGNVVIYG--------SDIWSTGTY  108 (109)
T ss_dssp             ----CCCCSSCCEEEECTTSCEEEEC--------CEEEECCCC
T ss_pred             ----eECCCCCEEEEEeCCCcEEEEC--------CCEecCCCc
Confidence                1113577899999999999982        357988764

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.14  E-value=7e-11  Score=101.29  Aligned_cols=111  Identities=24%  Similarity=0.425  Sum_probs=79.5

Q ss_pred             cccccCCCccCCCCeEEeeccCCCCcccceEeeeccCCceeeeeccccccccceeecCCccccCcCcceeeeeecCCccE
Q 038002          151 TDTILGGQSLENGEHLLSSVTETNSSTGRFCLNMQEDGNIVLYPRNMLNKALEAYWANGTDIQSEYPYSVKLNLSPNGVL  230 (702)
Q Consensus       151 TDTlLpgq~l~~~~~L~S~~s~~dps~G~fsl~l~~~g~~~~~~~~~~~~~~~~yw~~g~~~~~~~~~~~~~~~~~~~~~  230 (702)
                      ||||+|||.|..++.|++         |.|+|.|+.||++++|.      ...++|.+++.....   ...+.++.+|.+
T Consensus         1 tDtL~~gq~L~~g~~l~~---------g~~~l~~q~DGNLvly~------~~~~vW~s~~~~~~~---~~~l~l~~dGnL   62 (112)
T d1xd5a_           1 SDRLNSGHQLDTGGSLAE---------GGYLFIIQNDCNLVLYD------NNRAVWASGTNGKAS---GCVLKMQNDGNL   62 (112)
T ss_dssp             CCEEETTEEECTTCEEEE---------TTEEEEECTTSCEEEEE------TTEEEEECCCTTSCS---SEEEEECTTSCE
T ss_pred             CCEecCCCEecCCCEEEE---------CCEEEEEcCCCCEEEEc------CCcEEEEccCccCCC---CcEEEEeccccE
Confidence            899999999999999964         99999999999999983      235789887653222   235889999999


Q ss_pred             EEeecCccceEEeeeeeeeeccCcceEEEEEEccCCcEEEEEecccCCCCcceEEEEeeccccc
Q 038002          231 QLLSGNKTQKILFRSSYSLKSMNETVIYRTTLDSDGILRLYSHHFKNDGNSTVGIEWSALEKQC  294 (702)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~Ld~dG~lr~y~~~~~~~~~~~w~~~w~~p~~~C  294 (702)
                      .++.........       ........++++|++||||++|.-   +     ....|+...++|
T Consensus        63 vl~~~~~~~w~s-------~t~~~~~~~~l~L~ddGNlvly~~---~-----~~~~W~S~t~~~  111 (112)
T d1xd5a_          63 VIYSGSRAIWAS-------NTNRQNGNYYLILQRDRNVVIYDN---S-----NNAIWATHTNVG  111 (112)
T ss_dssp             EEEETTEEEEEC-------CCCCSCCCCEEEECTTSCEEEECT---T-----SCEEEECCCCCC
T ss_pred             EEEecCCeEEEE-------eeccCCCceEEEEcCCCCEEEECC---C-----CcEEecCCCccC
Confidence            887654332211       112223346899999999999831   1     224688776665

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.94  E-value=0.00081  Score=64.93  Aligned_cols=86  Identities=15%  Similarity=0.124  Sum_probs=62.2

Q ss_pred             eeeEEEEEecCCeeEEEEecCCCCCHHHHhhcCCCCCCHHHHHHHHHHHHHHHHhhhhcC--------------------
Q 038002          471 ISSLLVYKHRSSKKLLVYEFMSKGSLADLLFNLETRPLWRDRVRIALDVARGLLYLHDEC--------------------  530 (702)
Q Consensus       471 i~~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--------------------  530 (702)
                      +.+++.+.++++..++||++++|.++.+......      ....++.++++.++.||+..                    
T Consensus        72 vP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~~~------~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~  145 (263)
T d1j7la_          72 VPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQ------SPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYL  145 (263)
T ss_dssp             CCCEEEEEEETTEEEEEEECCSSEEHHHHTTTCS------CHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHH
T ss_pred             CCcEEEEEecCCceEEEEEecccccccccccccc------cHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHH
Confidence            4677777888899999999999988876553211      12334556666666666421                    


Q ss_pred             ------------------------------------CCCeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          531 ------------------------------------EVQIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       531 ------------------------------------~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                                                          ...++|+|+.|.||++++++...|+||+.+..
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         146 LNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             HHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHhhhhhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                                                01489999999999999876677999987753

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=96.07  E-value=0.0034  Score=60.01  Aligned_cols=30  Identities=23%  Similarity=0.339  Sum_probs=26.0

Q ss_pred             CeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          533 QIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       533 ~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      .++|+|+.|.||+++++..+-|+||+.+..
T Consensus       176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         176 VVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             EEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             eEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence            489999999999999877778999987653

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.02  E-value=0.0096  Score=36.69  Aligned_cols=33  Identities=30%  Similarity=0.659  Sum_probs=27.0

Q ss_pred             cccccccCCCCCccccCCCCCCCCCccCCCCCccccC
Q 038002          292 KQCVVKGFCGLNSYCSTSTNISTKGDCHCFRGFNFIN  328 (702)
Q Consensus       292 ~~Cd~~g~CG~~g~C~~~~~~~~~~~C~C~~GF~~~~  328 (702)
                      |.|.+-..|| +|-|+.   ....-.|.|-.||+|..
T Consensus         2 dECsignpCG-nGTCtN---viGgFec~C~~GFepgp   34 (39)
T d1emoa2           2 DECSVGNPCG-NGTCKN---VIGGFECTCEEGFEPGP   34 (39)
T ss_dssp             CGGGTTCSSS-SSCEEE---CSSSEEECCSSSSCCCS
T ss_pred             CccccCCccC-Cceeee---cccceEEeecCCcCCCc
Confidence            6899999999 889985   44566799999998753

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=93.17  E-value=0.061  Score=54.70  Aligned_cols=29  Identities=24%  Similarity=0.320  Sum_probs=25.6

Q ss_pred             CeEecCCCCCcEEEeCCCcEEEecccceee
Q 038002          533 QIIHCDIKLRNILIDDSWRAKISDFGLAKL  562 (702)
Q Consensus       533 ~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~  562 (702)
                      .++|||+.|.|||++++. ++|+||..+..
T Consensus       224 ~LiHGDl~~gNIlv~~~~-~~vID~E~a~~  252 (392)
T d2pula1         224 TLIHGDLHTGSIFASEHE-TKVIDPEFAFY  252 (392)
T ss_dssp             EEECSCCCGGGEEECSSC-EEECCCTTCEE
T ss_pred             ceeccCCcCCceeEcCCc-eEEechhhccc
Confidence            699999999999998764 89999988764

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.03  E-value=0.15  Score=49.76  Aligned_cols=30  Identities=23%  Similarity=0.283  Sum_probs=27.3

Q ss_pred             CCeEecCCCCCcEEEeCCCcEEEeccccee
Q 038002          532 VQIIHCDIKLRNILIDDSWRAKISDFGLAK  561 (702)
Q Consensus       532 ~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~  561 (702)
                      .|+||+|+.++||+++.+...-|+||+.+.
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccccCCcchhhhhcccccceeEecccccc
Confidence            489999999999999998878899999876

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=83.51  E-value=0.38  Score=48.45  Aligned_cols=17  Identities=29%  Similarity=0.487  Sum_probs=13.8

Q ss_pred             CeEecCCCCCcEEEeCC
Q 038002          533 QIIHCDIKLRNILIDDS  549 (702)
Q Consensus       533 ~ivH~dlkp~NIll~~~  549 (702)
                      .++|+|+.+.||++.+.
T Consensus       219 v~CHnDL~~~NiL~~~~  235 (395)
T d1nw1a_         219 TFCHNDLQEGNILLPKA  235 (395)
T ss_dssp             EEECSCCCGGGEEEEC-
T ss_pred             eEEecCCCcccEeeccc
Confidence            36799999999999653

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.19  E-value=0.24  Score=32.37  Aligned_cols=31  Identities=19%  Similarity=0.660  Sum_probs=23.8

Q ss_pred             ccccc-ccCCCCCccccCCCCCCCCCccCCCCCcc
Q 038002          292 KQCVV-KGFCGLNSYCSTSTNISTKGDCHCFRGFN  325 (702)
Q Consensus       292 ~~Cd~-~g~CG~~g~C~~~~~~~~~~~C~C~~GF~  325 (702)
                      |+|.. ...|..+|.|..   ...+-.|.|++||.
T Consensus         4 deC~~~~~pC~n~g~C~n---~~g~y~C~C~~G~~   35 (42)
T d2vj3a1           4 DECSLGANPCEHAGKCIN---TLGSFECQCLQGYT   35 (42)
T ss_dssp             CTTTSSSCSSSTTCEEEE---CSSSEEEECCTTEE
T ss_pred             ccccCCCCCCCCCcEeEC---CCCCEEeECCCCCc
Confidence            56775 467999999975   23456899999985