BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038003
(848 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 238/518 (45%), Gaps = 66/518 (12%)
Query: 95 IPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLID 154
IP +G+ S LQ+LD+ N+LSG I +L+ L + NQ G IPP L +
Sbjct: 213 IPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQ 269
Query: 155 KLALCHNNLHGSIPSSL-GNLSNLAVLYLYKNSLSGSIPSIIG----------------- 196
L+L N G IP L G L L L N G++P G
Sbjct: 270 YLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSG 329
Query: 197 --------KLKSLLQLDLSENQFSGSIPLSLGNLS-SLTMMSLFNNSLSGSIPPILGNL- 246
K++ L LDLS N+FSG +P SL NLS SL + L +N+ SG PIL NL
Sbjct: 330 ELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG---PILPNLC 386
Query: 247 ----KSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELEL 302
+L L L N G IPP++ N S L L+L N L G +P +G L L +L+L
Sbjct: 387 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 446
Query: 303 CTNLLRGVIPH------SIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFN 356
N+L G IP ++E ++L+ N+L+G++ + NL ++ LSNN GEI
Sbjct: 447 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW 506
Query: 357 WGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQL----------- 405
G L+ +S N+ SG+IP ++G+ L LDL++N G IP +
Sbjct: 507 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 566
Query: 406 ---EMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIG-------- 454
+ G LEF + Q LST + + G
Sbjct: 567 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD 626
Query: 455 NLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSH 514
N + +L++S N LS IP E + +L L+L HN + IP +V ++ L L+LS
Sbjct: 627 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 686
Query: 515 NNLSDFIPRCFEEMRSLSCIDISYNELHGPIPNSTAFK 552
N L IP+ + L+ ID+S N L GPIP F+
Sbjct: 687 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFE 724
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 189/390 (48%), Gaps = 55/390 (14%)
Query: 93 GNIPLQIGNLS-KLQYLDLGSNQLSGLIPPEIGK--LNQLRRLYLDMNQLHGTIPPEIGQ 149
G +P + NLS L LDL SN SG I P + + N L+ LYL N G IPP +
Sbjct: 354 GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSN 413
Query: 150 LSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSEN 209
S + L L N L G+IPSSLG+LS L L L+ N L G IP + +K+L L L N
Sbjct: 414 CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFN 473
Query: 210 QFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGN 269
+G IP L N ++L +SL NN L+G IP +G L++L+ L L N +G IP +G+
Sbjct: 474 DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGD 533
Query: 270 LSSLRVLYLYNNGLYGFVPEEI-----------------GYLKSLSELELC---TNLL-- 307
SL L L N G +P + Y+K+ + C NLL
Sbjct: 534 CRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEF 593
Query: 308 RGVIPHSIERV-LLNQNNLSGKMY-----EAFGDHPNLTFLDLSNNNFCGEISFNWGNFS 361
+G+ + R+ N N++ ++Y F ++ ++ FLD+S N G I G+
Sbjct: 594 QGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMP 653
Query: 362 KLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMXXXXXXXXXXXXXX 421
L + N+ISGSIP ++G+ L +LDLSSN + G+IP +
Sbjct: 654 YLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS--------------- 698
Query: 422 XGGVPLEFGSLTKLQYLDLSTNKLSSSIPK 451
+LT L +DLS N LS IP+
Sbjct: 699 ---------ALTMLTEIDLSNNNLSGPIPE 719
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 167/552 (30%), Positives = 254/552 (46%), Gaps = 35/552 (6%)
Query: 31 LYPANATKISPCSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLAXXXXXXXX 90
L P ++ +PC++ G++C +V SI +S+ LN F S S
Sbjct: 26 LLPDWSSNKNPCTFDGVTCRD--DKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSN 83
Query: 91 XXGNIPLQIGNLS-KLQYLDLGSNQLSGLIPP--EIGKLNQLRRLYLDMNQLHGTIPPEI 147
N + S L LDL N LSG + +G + L+ L + N L P ++
Sbjct: 84 SHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKV 141
Query: 148 G---QLSLIDKLALCHNNLHGS------IPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKL 198
+L+ ++ L L N++ G+ + G L +LA+ N +SG + + +
Sbjct: 142 SGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAI---SGNKISGDVD--VSRC 196
Query: 199 KSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQ 258
+L LD+S N FS IP LG+ S+L + + N LSG + L L + NQ
Sbjct: 197 VNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQ 255
Query: 259 LNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEI-GYLKSLSELELCTNLLRGVIP----- 312
G IPP L SL+ L L N G +P+ + G +L+ L+L N G +P
Sbjct: 256 FVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGS 313
Query: 313 -HSIERVLLNQNNLSGKM-YEAFGDHPNLTFLDLSNNNFCGEISFNWGNFS-KLSTFIVS 369
+E + L+ NN SG++ + L LDLS N F GE+ + N S L T +S
Sbjct: 314 CSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLS 373
Query: 370 MNNISGSIPPDIGNSPK--LQVLDLSSNHIVGKIPVQLEMXXXXXXXXXXXXXXXGGVPL 427
NN SG I P++ +PK LQ L L +N GKIP L G +P
Sbjct: 374 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 433
Query: 428 EFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELD 487
GSL+KL+ L L N L IP+ + + L L L N L+ +IP+ +L+ +
Sbjct: 434 SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWIS 493
Query: 488 LSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIPN 547
LS+N L EIP + + +L L LS+N+ S IP + RSL +D++ N +G IP
Sbjct: 494 LSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 553
Query: 548 STAFKDGLMEGN 559
+ + G + N
Sbjct: 554 AMFKQSGKIAAN 565
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 77 SFPHLAXXXXXXXXXXGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDM 136
S P+L G+IP ++G+L L LDL SN+L G IP + L L + L
Sbjct: 651 SMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 710
Query: 137 NQLHGTIPPEIGQL 150
N L G I PE+GQ
Sbjct: 711 NNLSGPI-PEMGQF 723
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 236/514 (45%), Gaps = 65/514 (12%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+G+ S LQ+LD+ N+LSG I +L+ L + NQ G IPP L + L+L
Sbjct: 219 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSL 276
Query: 159 CHNNLHGSIPSSL-GNLSNLAVLYLYKNSLSGSIPSIIG--------------------- 196
N G IP L G L L L N G++P G
Sbjct: 277 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 336
Query: 197 ----KLKSLLQLDLSENQFSGSIPLSLGNLS-SLTMMSLFNNSLSGSIPPILGNL----- 246
K++ L LDLS N+FSG +P SL NLS SL + L +N+ SG PIL NL
Sbjct: 337 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG---PILPNLCQNPK 393
Query: 247 KSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNL 306
+L L L N G IPP++ N S L L+L N L G +P +G L L +L+L N+
Sbjct: 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 453
Query: 307 LRGVIPH------SIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNF 360
L G IP ++E ++L+ N+L+G++ + NL ++ LSNN GEI G
Sbjct: 454 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRL 513
Query: 361 SKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQL--------------E 406
L+ +S N+ SG+IP ++G+ L LDL++N G IP + +
Sbjct: 514 ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGK 573
Query: 407 MXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIG--------NLLK 458
G LEF + Q LST + + G N
Sbjct: 574 RYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGS 633
Query: 459 LHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLS 518
+ +L++S N LS IP E + +L L+L HN + IP +V ++ L L+LS N L
Sbjct: 634 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 693
Query: 519 DFIPRCFEEMRSLSCIDISYNELHGPIPNSTAFK 552
IP+ + L+ ID+S N L GPIP F+
Sbjct: 694 GRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFE 727
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 189/390 (48%), Gaps = 55/390 (14%)
Query: 93 GNIPLQIGNLSK-LQYLDLGSNQLSGLIPPEIGK--LNQLRRLYLDMNQLHGTIPPEIGQ 149
G +P + NLS L LDL SN SG I P + + N L+ LYL N G IPP +
Sbjct: 357 GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSN 416
Query: 150 LSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSEN 209
S + L L N L G+IPSSLG+LS L L L+ N L G IP + +K+L L L N
Sbjct: 417 CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFN 476
Query: 210 QFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGN 269
+G IP L N ++L +SL NN L+G IP +G L++L+ L L N +G IP +G+
Sbjct: 477 DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGD 536
Query: 270 LSSLRVLYLYNNGLYGFVPEEI-----------------GYLKSLSELELC---TNLL-- 307
SL L L N G +P + Y+K+ + C NLL
Sbjct: 537 CRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEF 596
Query: 308 RGVIPHSIERV-LLNQNNLSGKMY-----EAFGDHPNLTFLDLSNNNFCGEISFNWGNFS 361
+G+ + R+ N N++ ++Y F ++ ++ FLD+S N G I G+
Sbjct: 597 QGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMP 656
Query: 362 KLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMXXXXXXXXXXXXXX 421
L + N+ISGSIP ++G+ L +LDLSSN + G+IP +
Sbjct: 657 YLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS--------------- 701
Query: 422 XGGVPLEFGSLTKLQYLDLSTNKLSSSIPK 451
+LT L +DLS N LS IP+
Sbjct: 702 ---------ALTMLTEIDLSNNNLSGPIPE 722
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 167/552 (30%), Positives = 254/552 (46%), Gaps = 35/552 (6%)
Query: 31 LYPANATKISPCSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLAXXXXXXXX 90
L P ++ +PC++ G++C +V SI +S+ LN F S S
Sbjct: 29 LLPDWSSNKNPCTFDGVTCRD--DKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSN 86
Query: 91 XXGNIPLQIGNLSK-LQYLDLGSNQLSGLIPP--EIGKLNQLRRLYLDMNQLHGTIPPEI 147
N + S L LDL N LSG + +G + L+ L + N L P ++
Sbjct: 87 SHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKV 144
Query: 148 G---QLSLIDKLALCHNNLHGS------IPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKL 198
+L+ ++ L L N++ G+ + G L +LA+ N +SG + + +
Sbjct: 145 SGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAI---SGNKISGDVD--VSRC 199
Query: 199 KSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQ 258
+L LD+S N FS IP LG+ S+L + + N LSG + L L + NQ
Sbjct: 200 VNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQ 258
Query: 259 LNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEI-GYLKSLSELELCTNLLRGVIP----- 312
G IPP L SL+ L L N G +P+ + G +L+ L+L N G +P
Sbjct: 259 FVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGS 316
Query: 313 -HSIERVLLNQNNLSGKM-YEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSK-LSTFIVS 369
+E + L+ NN SG++ + L LDLS N F GE+ + N S L T +S
Sbjct: 317 CSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLS 376
Query: 370 MNNISGSIPPDIGNSPK--LQVLDLSSNHIVGKIPVQLEMXXXXXXXXXXXXXXXGGVPL 427
NN SG I P++ +PK LQ L L +N GKIP L G +P
Sbjct: 377 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 436
Query: 428 EFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELD 487
GSL+KL+ L L N L IP+ + + L L L N L+ +IP+ +L+ +
Sbjct: 437 SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWIS 496
Query: 488 LSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIPN 547
LS+N L EIP + + +L L LS+N+ S IP + RSL +D++ N +G IP
Sbjct: 497 LSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556
Query: 548 STAFKDGLMEGN 559
+ + G + N
Sbjct: 557 AMFKQSGKIAAN 568
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 77 SFPHLAXXXXXXXXXXGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDM 136
S P+L G+IP ++G+L L LDL SN+L G IP + L L + L
Sbjct: 654 SMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 713
Query: 137 NQLHGTIPPEIGQL 150
N L G I PE+GQ
Sbjct: 714 NNLSGPI-PEMGQF 726
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 5/216 (2%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLA 652
E+ A+D+F K +G+GG G VYK L G +VAVK+ + G +F EV
Sbjct: 32 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL---QFQTEVEM 88
Query: 653 LKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKE-LGWNRRINVIKGV 711
+ HRN ++ GFC LV Y+ GS+A L + ++ L W +R + G
Sbjct: 89 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGS 148
Query: 712 ANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN-WTEFAGTFG 770
A L+YLH C P IIHRD+ + N+LLD FEA V DFG+AK + + GT G
Sbjct: 149 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIG 208
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRD 806
+ APE T +++EK DV+ +GV++ E+I G D
Sbjct: 209 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 244
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 115/216 (53%), Gaps = 5/216 (2%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLA 652
E+ A+D+F K +G+GG G VYK L G +VAVK+ + G +F EV
Sbjct: 24 ELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL---QFQTEVEM 80
Query: 653 LKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKE-LGWNRRINVIKGV 711
+ HRN ++ GFC LV Y+ GS+A L + ++ L W +R + G
Sbjct: 81 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGS 140
Query: 712 ANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN-WTEFAGTFG 770
A L+YLH C P IIHRD+ + N+LLD FEA V DFG+AK + + G G
Sbjct: 141 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIG 200
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRD 806
+ APE T +++EK DV+ +GV++ E+I G D
Sbjct: 201 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 111/213 (52%), Gaps = 11/213 (5%)
Query: 599 DDFDEKFC-------IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVL 651
DD D +C IG G G+V++AE D VAVK Q +EFL EV
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSD-VAVKILMEQDFHAERV--NEFLREVA 86
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGV 711
+K +RH N V F G P+ +V EYL RGSL R+L ++L RR+++ V
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 712 ANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGY 771
A ++YLH+ P I+HRD+ S N+L+D + V DFG+++ AGT +
Sbjct: 147 AKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEW 205
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
APE+ + EK DVYSFGV+++E+ P
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 112/213 (52%), Gaps = 11/213 (5%)
Query: 599 DDFDEKFC-------IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVL 651
DD D +C IG G G+V++AE D VAVK Q +EFL EV
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSD-VAVKILMEQDFHAERV--NEFLREVA 86
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGV 711
+K +RH N V F G P+ +V EYL RGSL R+L ++L RR+++ V
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 712 ANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGY 771
A ++YLH+ P I+HR++ S N+L+D + V DFG+++ + AGT +
Sbjct: 147 AKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEW 205
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
APE+ + EK DVYSFGV+++E+ P
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 109/214 (50%), Gaps = 24/214 (11%)
Query: 596 KATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+AT++FD KF IG G G VYK L G VA+K+ + G E+ L
Sbjct: 36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF----ETEIETLSF 91
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLAR-ILGDDVTAKELGWNRRINVIKGVANA 714
RH + V GFC L+ +Y++ G+L R + G D+ + W +R+ + G A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFA-------- 766
L YLH +IIHRD+ S N+LLD NF ++DFGI+K TE
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK-------KGTELGQTHLXXVV 201
Query: 767 -GTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
GT GY PE R TEK DVYSFGV++FEV+
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 109/207 (52%), Gaps = 10/207 (4%)
Query: 596 KATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+AT++FD KF IG G G VYK L G VA+K+ + G F E+ L
Sbjct: 36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE----FETEIETLSF 91
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLAR-ILGDDVTAKELGWNRRINVIKGVANA 714
RH + V GFC L+ +Y++ G+L R + G D+ + W +R+ + G A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP--HSSNWTEFAGTFGYA 772
L YLH +IIHRD+ S N+LLD NF ++DFGI+K + GT GY
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVI 799
PE R TEK DVYSFGV++FEV+
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 110/217 (50%), Gaps = 13/217 (5%)
Query: 593 EIIKATDDFDEKFC------IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEF 646
E+ T++FDE+ +G+GG G VYK + + VAVKK + + +F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 77
Query: 647 LNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN 706
E+ + + +H N V+ GF +G LV Y+ GSL L L W+ R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137
Query: 707 VIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTE 764
+ +G AN +++LH + IHRDI S N+LLD F A +SDFG+A+ + +
Sbjct: 138 IAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSR 194
Query: 765 FAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKG 801
GT Y APE A T K D+YSFGV++ E+I G
Sbjct: 195 IVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 593 EIIKATDDFDEKFC------IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEF 646
E+ T++FDE+ +G+GG G VYK + + VAVKK + + +F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 77
Query: 647 LNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN 706
E+ + + +H N V+ GF +G LV Y+ GSL L L W+ R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 137
Query: 707 VIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTE 764
+ +G AN +++LH + IHRDI S N+LLD F A +SDFG+A+ +
Sbjct: 138 IAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXR 194
Query: 765 FAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKG 801
GT Y APE A T K D+YSFGV++ E+I G
Sbjct: 195 IVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 593 EIIKATDDFDEKFC------IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEF 646
E+ T++FDE+ +G+GG G VYK + + VAVKK + + +F
Sbjct: 13 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 71
Query: 647 LNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN 706
E+ + + +H N V+ GF +G LV Y+ GSL L L W+ R
Sbjct: 72 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK 131
Query: 707 VIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTE 764
+ +G AN +++LH + IHRDI S N+LLD F A +SDFG+A+ +
Sbjct: 132 IAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXR 188
Query: 765 FAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKG 801
GT Y APE A T K D+YSFGV++ E+I G
Sbjct: 189 IVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 107/217 (49%), Gaps = 13/217 (5%)
Query: 593 EIIKATDDFDEKFC------IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEF 646
E+ T++FDE+ G+GG G VYK + + VAVKK + + +F
Sbjct: 10 ELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQF 68
Query: 647 LNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN 706
E+ + +H N V+ GF +G LV Y GSL L L W+ R
Sbjct: 69 DQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCK 128
Query: 707 VIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSS--NWTE 764
+ +G AN +++LH + IHRDI S N+LLD F A +SDFG+A+ + +
Sbjct: 129 IAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSR 185
Query: 765 FAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKG 801
GT Y APE A T K D+YSFGV++ E+I G
Sbjct: 186 IVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 110/221 (49%), Gaps = 4/221 (1%)
Query: 95 IPLQIGNLSKLQYLDLGS-NQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLI 153
IP + NL L +L +G N L G IPP I KL QL LY+ + G IP + Q+ +
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 154 DKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLL-QLDLSENQFS 212
L +N L G++P S+ +L NL + N +SG+IP G L + +S N+ +
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 213 GSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSS 272
G IP + NL +L + L N L G + G+ K+ + L N L F +G +
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL-AFDLGKVGLSKN 245
Query: 273 LRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPH 313
L L L NN +YG +P+ + LK L L + N L G IP
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 119/237 (50%), Gaps = 22/237 (9%)
Query: 119 IPPEIGKLNQLRRLYLD-MNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNL 177
IP + L L LY+ +N L G IPP I +L+ + L + H N+ G+IP L + L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 178 AVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSL-TMMSLFNNSLS 236
L N+LSG++P I L +L+ + N+ SG+IP S G+ S L T M++ N L+
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 237 GSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKS 296
G IPP NL +L+ + L N L G G+ + + ++L N L F ++G K+
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL-AFDLGKVGLSKN 245
Query: 297 LSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEI 353
L+ L+L N + G +P + ++ L L++S NN CGEI
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKF------------------LHSLNVSFNNLCGEI 284
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 117/235 (49%), Gaps = 25/235 (10%)
Query: 161 NNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLG 220
NNL G IP ++ L+ L LY+ ++SG+IP + ++K+L+ LD S N SG++P S+
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 221 NLSSLTMMSLFNNSLSGSIPPILGNLKSL-SALGLHINQLNGFIPPSIGNLSSLRVLYLY 279
+L +L ++ N +SG+IP G+ L +++ + N+L G IPP+ NL +L + L
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLS 205
Query: 280 NNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNL 339
N L G G K+ ++ L N L + +V L++ NL
Sbjct: 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLA----FDLGKVGLSK---------------NL 246
Query: 340 TFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSS 394
LDL NN G + L + VS NN+ G IP GN LQ D+S+
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GN---LQRFDVSA 297
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 7/252 (2%)
Query: 43 SWFGISCNHAGS--RVISITMSTLGLNGTFH-DFSFSSFPHLAXXXXX-XXXXXGNIPLQ 98
+W G+ C+ RV ++ +S L L + S ++ P+L G IP
Sbjct: 37 TWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPA 96
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
I L++L YL + +SG IP + ++ L L N L GT+PP I L + +
Sbjct: 97 IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156
Query: 159 CHNNLHGSIPSSLGNLSNL-AVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPL 217
N + G+IP S G+ S L + + +N L+G IP L +L +DLS N G +
Sbjct: 157 DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASV 215
Query: 218 SLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLY 277
G+ + + L NSL+ + + G K+L+ L L N++ G +P + L L L
Sbjct: 216 LFGSDKNTQKIHLAKNSLAFDLGKV-GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274
Query: 278 LYNNGLYGFVPE 289
+ N L G +P+
Sbjct: 275 VSFNNLCGEIPQ 286
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 366 FIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMXXXXXXXXXXXXXXXGGV 425
+I +NN+ G IPP I +L L ++ ++ G IP L G +
Sbjct: 82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTL 141
Query: 426 PLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHY-LNLSNNQLSHKIPTEFEKLIHLS 484
P SL L + N++S +IP S G+ KL + +S N+L+ KIP F L +L+
Sbjct: 142 PPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLA 200
Query: 485 ELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLS-----------------------DFI 521
+DLS N+L+ + + + +K++L+ N+L+ +
Sbjct: 201 FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTL 260
Query: 522 PRCFEEMRSLSCIDISYNELHGPIP 546
P+ +++ L +++S+N L G IP
Sbjct: 261 PQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 26/218 (11%)
Query: 331 EAFGDHPNLTFLDLSN-NNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQV 389
+ + P L FL + NN G I ++L ++ N+SG+IP + L
Sbjct: 70 SSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129
Query: 390 LDLSSNHIVGKIPVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKL-QYLDLSTNKLSSS 448
LD S N + G +P + G +P +GS +KL + +S N+L+
Sbjct: 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGK 189
Query: 449 IPKSIGNLLKLHYLNLSNNQLSHKIPTEF-----EKLIHLSE------------------ 485
IP + NL L +++LS N L F + IHL++
Sbjct: 190 IPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNG 248
Query: 486 LDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPR 523
LDL +N + +P + + L LN+S NNL IP+
Sbjct: 249 LDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 431 SLTKLQYLDL----STNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSEL 486
SL L YL+ N L IP +I L +LHYL +++ +S IP ++ L L
Sbjct: 71 SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130
Query: 487 DLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSL-SCIDISYNELHGPI 545
D S+N L +PP + ++ +L + N +S IP + L + + IS N L G I
Sbjct: 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKI 190
Query: 546 PNSTA 550
P + A
Sbjct: 191 PPTFA 195
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 12/199 (6%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG+G G+VY A ++ +G VA+++ N Q + +NE+L ++E ++ N V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQ----QQPKKELIINEILVMRENKNPNIVNYL 83
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
G ++V EYL GSL D VT + + V + AL +LH +
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---Q 136
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEK 785
+IHRDI S N+LL + ++DFG + P S +E GT + APE+ K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 786 YDVYSFGVLVFEVIKGNHP 804
D++S G++ E+I+G P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG+G G+VY A ++ +G VA+++ N Q + +NE+L ++E ++ N V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQ----QQPKKELIINEILVMRENKNPNIVNYL 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
G ++V EYL GSL D VT + + V + AL +LH +
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---Q 137
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEK 785
+IHRDI S N+LL + ++DFG + P S + GT + APE+ K
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 786 YDVYSFGVLVFEVIKGNHP 804
D++S G++ E+I+G P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG+G G+VY A ++ +G VA+++ N Q + +NE+L ++E ++ N V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQ----QQPKKELIINEILVMRENKNPNIVNYL 83
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
G ++V EYL GSL D VT + + V + AL +LH +
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---Q 136
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEK 785
+IHRDI S N+LL + ++DFG + P S + GT + APE+ K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 786 YDVYSFGVLVFEVIKGNHP 804
D++S G++ E+I+G P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG+G G+VY A ++ +G VA+++ N Q + +NE+L ++E ++ N V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQ----QQPKKELIINEILVMRENKNPNIVNYL 83
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
G ++V EYL GSL D VT + + V + AL +LH +
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---Q 136
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEK 785
+IHRDI S N+LL + ++DFG + P S + GT + APE+ K
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 786 YDVYSFGVLVFEVIKGNHP 804
D++S G++ E+I+G P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 95.9 bits (237), Expect = 8e-20, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 102/207 (49%), Gaps = 10/207 (4%)
Query: 599 DDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
+DFD +GKG G+VY A E S I+A+K L +H + EV +R
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEH-QLRREVEIQSHLR 70
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
H N ++ +G+ ++ +L+ EY G++ R L E R I +ANALSY
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALSY 127
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H +IHRDI +N+LL SN E ++DFG + V SS T GT Y PE+
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMI 182
Query: 778 YTMRATEKYDVYSFGVLVFEVIKGNHP 804
EK D++S GVL +E + G P
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 111/225 (49%), Gaps = 17/225 (7%)
Query: 586 DGKIMHE-EIIKATDDFDEKFC----IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGN 639
D +I+ + II + D +K+ IG+G G+VY A ++ +G VA+++ N Q
Sbjct: 3 DEEILEKLRIIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ----Q 58
Query: 640 MADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKEL 699
+ +NE+L ++E ++ N V + G ++V EYL GSL D VT +
Sbjct: 59 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCM 114
Query: 700 GWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS 759
+ V + AL +LH + +IHR+I S N+LL + ++DFG + P
Sbjct: 115 DEGQIAAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQ 171
Query: 760 SNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
S + GT + APE+ K D++S G++ E+I+G P
Sbjct: 172 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 95.1 bits (235), Expect = 1e-19, Method: Composition-based stats.
Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 64
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 121
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS TE GT Y PE
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPE 176
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 69
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY RG + + L E R I +ANAL
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANAL 126
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS T GT Y PE
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 181
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 107/219 (48%), Gaps = 10/219 (4%)
Query: 587 GKIMHEEIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDE 645
G M ++ A +DF+ +GKG G+VY A E S I+A+K L +H +
Sbjct: 1 GSHMSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-Q 59
Query: 646 FLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRI 705
EV +RH N ++ +G+ ++ +L+ EY G++ R L E R
Sbjct: 60 LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTA 116
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF 765
I +ANALSY H +IHRDI +N+LL S E ++DFG + V SS T+
Sbjct: 117 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDL 171
Query: 766 AGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
GT Y PE+ EK D++S GVL +E + G P
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 103/209 (49%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 64
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 121
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS T+ GT Y PE
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPE 176
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 90
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 147
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS T GT Y PE
Sbjct: 148 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 202
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 67
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 124
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS T GT Y PE
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 179
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 69
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 126
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS T GT Y PE
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 181
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 94.0 bits (232), Expect = 3e-19, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 103/209 (49%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 64
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 121
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS T+ GT Y PE
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPE 176
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 94.0 bits (232), Expect = 3e-19, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 103/209 (49%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 65
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 122
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS T+ GT Y PE
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPE 177
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 81
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 82 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 138
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS T GT Y PE
Sbjct: 139 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 193
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 194 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 94.0 bits (232), Expect = 4e-19, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 67
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 124
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS T GT Y PE
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 179
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 93.6 bits (231), Expect = 4e-19, Method: Composition-based stats.
Identities = 71/207 (34%), Positives = 101/207 (48%), Gaps = 10/207 (4%)
Query: 599 DDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
+DFD +GKG G+VY A E S I+A+K L +H + EV +R
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEH-QLRREVEIQSHLR 70
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
H N ++ +G+ ++ +L+ EY G++ R L E R I +ANALSY
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALSY 127
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H +IHRDI +N+LL SN E ++DFG + V SS GT Y PE+
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMI 182
Query: 778 YTMRATEKYDVYSFGVLVFEVIKGNHP 804
EK D++S GVL +E + G P
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 93.6 bits (231), Expect = 4e-19, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 64
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 121
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS T GT Y PE
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPE 176
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 93.6 bits (231), Expect = 4e-19, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 63
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 120
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS T GT Y PE
Sbjct: 121 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 175
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 176 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 93.6 bits (231), Expect = 4e-19, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 68
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 125
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS T GT Y PE
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 180
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 69
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY RG + + L E R I +ANAL
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANAL 126
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS GT Y PE
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPE 181
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 90
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 147
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS + GT Y PE
Sbjct: 148 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPE 202
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 92.8 bits (229), Expect = 7e-19, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 64
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 121
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS T GT Y PE
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 176
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 69
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 126
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS T GT Y PE
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 181
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EK D++S GVL +E + G P
Sbjct: 182 XIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 67
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 124
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS GT Y PE
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPE 179
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 64
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 121
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS GT Y PE
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPE 176
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E I+A+K L +H + EV
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 61
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 118
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS T GT Y PE
Sbjct: 119 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 173
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 174 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/209 (33%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 67
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 124
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS + GT Y PE
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPE 179
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 67
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 124
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS GT Y PE
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPE 179
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/209 (33%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 65
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 122
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + SS T +GT Y PE
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPE 177
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 64
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 121
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS GT Y PE
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPE 176
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 90.9 bits (224), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/209 (33%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 66
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 123
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E +++FG + V SS T GT Y PE
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPE 178
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 90.9 bits (224), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/209 (33%), Positives = 102/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 67
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 124
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E +++FG + V SS T GT Y PE
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPE 179
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 90.9 bits (224), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 66
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 123
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS GT Y PE
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPE 178
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 64
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 121
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS GT Y PE
Sbjct: 122 SYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPE 176
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 10/209 (4%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
A +DF+ +GKG G+VY A E S I+A+K L +H + EV
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH-QLRREVEIQSH 65
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+RH N ++ +G+ ++ +L+ EY G++ R L E R I +ANAL
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANAL 122
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
SY H +IHRDI +N+LL S E ++DFG + V SS GT Y PE
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPE 177
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ EK D++S GVL +E + G P
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG+G G V A E +G VAVKK + + + NEV+ +++ H N V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLR----KQQRRELLFNEVVIMRDYHHDNVVDMY 108
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
G ++V E+L+ G+L D VT + + V V ALSYLH+
Sbjct: 109 SSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQ---G 161
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEK 785
+IHRDI S ++LL S+ +SDFG V GT + APE+ + +
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 786 YDVYSFGVLVFEVIKGNHP 804
D++S G++V E+I G P
Sbjct: 222 VDIWSLGIMVIEMIDGEPP 240
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 116/262 (44%), Gaps = 19/262 (7%)
Query: 544 PIPNSTAFKDGLMEGNKGLKRVSQEEQSNSMNRLRLLSVLNFDGKIMHEEIIKATDDFDE 603
P P ++G+ E G + +E Q S + R L D + D+F
Sbjct: 103 PPPARARQENGMPEKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYL----DNF-- 156
Query: 604 KFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + SG +VAVKK + + + NEV+ +++ +H N V
Sbjct: 157 -IKIGEGSTGIVCIATVRSSGKLVAVKKMDLR----KQQRRELLFNEVVIMRDYQHENVV 211
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + G ++V E+L+ G+L D VT + + V V ALS LH
Sbjct: 212 EMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ- 266
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
+IHRDI S ++LL + +SDFG V GT + APE+ +
Sbjct: 267 --GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 324
Query: 783 TEKYDVYSFGVLVFEVIKGNHP 804
+ D++S G++V E++ G P
Sbjct: 325 GPEVDIWSLGIMVIEMVDGEPP 346
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 19/221 (8%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKF---NSQLLSGNMADHDEFLNEVLA 652
A ++ + + IGKGG G V+K L +VA+K +S+ + + EF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 653 LKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVA 712
+ + H N VK +G +N P +V E++ G L L D A + W+ ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFE-----AHVSDFGIAKFVGPHSSNWTEFAG 767
+ Y+ + P I+HRD+ S N+ L S E A V+DFG+++ HS + G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-QSVHSV--SGLLG 188
Query: 768 TFGYAAPEI--AYTMRATEKYDVYSFGVLVFEVIKGNHPRD 806
F + APE A TEK D YSF ++++ ++ G P D
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 77
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+++GSL L + T K L + +++ +A+ ++Y+ +
Sbjct: 78 VVSEEP-IYIVTEYMNKGSLLDFLKGE-TGKYLRLPQLVDMSAQIASGMAYVERM---NY 132
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+A+ + + WT G + APE A R T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFT 190
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 191 IKSDVWSFGILLTELTTKGRVP 212
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 601 FDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
D IG+G G V A + SG +VAVKK + + + NEV+ +++ +H
Sbjct: 31 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR----KQQRRELLFNEVVIMRDYQHE 86
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH 719
N V+ + G ++V E+L+ G+L D VT + + V V ALS LH
Sbjct: 87 NVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLH 142
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT 779
+IHRDI S ++LL + +SDFG V GT + APE+
Sbjct: 143 AQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 199
Query: 780 MRATEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G++V E++ G P
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 601 FDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
D IG+G G V A + SG +VAVKK + + + NEV+ +++ +H
Sbjct: 22 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR----KQQRRELLFNEVVIMRDYQHE 77
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH 719
N V+ + G ++V E+L+ G+L D VT + + V V ALS LH
Sbjct: 78 NVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLH 133
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT 779
+IHRDI S ++LL + +SDFG V GT + APE+
Sbjct: 134 AQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 190
Query: 780 MRATEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G++V E++ G P
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 601 FDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
D IG+G G V A + SG +VAVKK + + + NEV+ +++ +H
Sbjct: 26 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR----KQQRRELLFNEVVIMRDYQHE 81
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH 719
N V+ + G ++V E+L+ G+L D VT + + V V ALS LH
Sbjct: 82 NVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLH 137
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT 779
+IHRDI S ++LL + +SDFG V GT + APE+
Sbjct: 138 AQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 194
Query: 780 MRATEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G++V E++ G P
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 601 FDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
D IG+G G V A + SG +VAVKK + + + NEV+ +++ +H
Sbjct: 33 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR----KQQRRELLFNEVVIMRDYQHE 88
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH 719
N V+ + G ++V E+L+ G+L D VT + + V V ALS LH
Sbjct: 89 NVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLH 144
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT 779
+IHRDI S ++LL + +SDFG V GT + APE+
Sbjct: 145 AQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 201
Query: 780 MRATEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G++V E++ G P
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 601 FDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
D IG+G G V A + SG +VAVKK + + + NEV+ +++ +H
Sbjct: 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR----KQQRRELLFNEVVIMRDYQHE 131
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH 719
N V+ + G ++V E+L+ G+L D VT + + V V ALS LH
Sbjct: 132 NVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLH 187
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT 779
+IHRDI S ++LL + +SDFG V GT + APE+
Sbjct: 188 AQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISR 244
Query: 780 MRATEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G++V E++ G P
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 19/221 (8%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKF---NSQLLSGNMADHDEFLNEVLA 652
A ++ + + IGKGG G V+K L +VA+K +S+ + + EF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 653 LKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVA 712
+ + H N VK +G +N P +V E++ G L L D A + W+ ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFE-----AHVSDFGIAKFVGPHSSNWTEFAG 767
+ Y+ + P I+HRD+ S N+ L S E A V+DFG ++ HS + G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-QSVHSV--SGLLG 188
Query: 768 TFGYAAPEI--AYTMRATEKYDVYSFGVLVFEVIKGNHPRD 806
F + APE A TEK D YSF ++++ ++ G P D
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG GG G VY+A GD VAVK + E ++H N + G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
C P+ LV E+ G L R+L + K + + +N +A ++YLH + + I
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGMNYLHDEAIVPI 129
Query: 727 IHRDISSKNVLLDSNFE--------AHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY 778
IHRD+ S N+L+ E ++DFG+A+ H + AG + + APE+
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTKMSAAGAYAWMAPEVIR 187
Query: 779 TMRATEKYDVYSFGVLVFEVIKGNHP 804
++ DV+S+GVL++E++ G P
Sbjct: 188 ASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++VCEY+ +GSL L ++ K L + +++ +A+ ++Y+ +
Sbjct: 81 VVSEEP-IYIVCEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+A+ + + +T G + APE A R T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 110/221 (49%), Gaps = 19/221 (8%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKF---NSQLLSGNMADHDEFLNEVLA 652
A ++ + + IGKGG G V+K L +VA+K +S+ + + EF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 653 LKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVA 712
+ + H N VK +G +N P +V E++ G L L D A + W+ ++ ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFE-----AHVSDFGIAKFVGPHSSNWTEFAG 767
+ Y+ + P I+HRD+ S N+ L S E A V+DF +++ HS + G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-QSVHSV--SGLLG 188
Query: 768 TFGYAAPEI--AYTMRATEKYDVYSFGVLVFEVIKGNHPRD 806
F + APE A TEK D YSF ++++ ++ G P D
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G+VYK + GD VAVK N + + F NEV L++ RH N + F G
Sbjct: 32 IGSGSFGTVYKGKW-HGD-VAVKMLN--VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+ P +V ++ + SL L T E+ + I++ + A + YLH SI
Sbjct: 88 YS-TAPQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLH---AKSI 141
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIA----KFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
IHRD+ S N+ L + + DFG+A ++ G H + + +G+ + APE+ M+
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH--QFEQLSGSILWMAPEV-IRMQD 198
Query: 783 TEKY----DVYSFGVLVFEVIKGNHP 804
+ Y DVY+FG++++E++ G P
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 607 IGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+GKG G K +G+++ +K +L+ + FL EV ++ + H N +KF
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMK----ELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
G Y + EY+ G+L I+ + W++R++ K +A+ ++YLH +
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKDIASGMAYLHS---MN 128
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFV--------------GPHSSNWTEFAGTFGY 771
IIHRD++S N L+ N V+DFG+A+ + P G +
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEVI 799
APE+ EK DV+SFG+++ E+I
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G+VYK + GD VAVK N + + F NEV L++ RH N + F G
Sbjct: 20 IGSGSFGTVYKGKW-HGD-VAVKMLN--VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+ P +V ++ + SL L T E+ + I++ + A + YLH SI
Sbjct: 76 YS-TKPQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLH---AKSI 129
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIA----KFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
IHRD+ S N+ L + + DFG+A ++ G H + + +G+ + APE+ M+
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSH--QFEQLSGSILWMAPEVI-RMQD 186
Query: 783 TEKY----DVYSFGVLVFEVIKGNHP 804
+ Y DVY+FG++++E++ G P
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G+VYK + GD VAVK N + + F NEV L++ RH N + F G
Sbjct: 16 IGSGSFGTVYKGKW-HGD-VAVKMLN--VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+ P +V ++ + SL L T E+ + I++ + A + YLH SI
Sbjct: 72 YS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAK---SI 125
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIA----KFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
IHRD+ S N+ L + + DFG+A ++ G H + + +G+ + APE+ M+
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH--QFEQLSGSILWMAPEVI-RMQD 182
Query: 783 TEKY----DVYSFGVLVFEVIKGNHP 804
Y DVY+FG++++E++ G P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G+VYK + GD VAVK N + + F NEV L++ RH N + F G
Sbjct: 32 IGSGSFGTVYKGKW-HGD-VAVKMLN--VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+ P +V ++ + SL L T E+ + I++ + A + YLH SI
Sbjct: 88 YS-TKPQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMDYLH---AKSI 141
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIA----KFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
IHRD+ S N+ L + + DFG+A ++ G H + + +G+ + APE+ M+
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH--QFEQLSGSILWMAPEV-IRMQD 198
Query: 783 TEKY----DVYSFGVLVFEVIKGNHP 804
+ Y DVY+FG++++E++ G P
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 599 DDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
DDF+ +GKG G+VY A E S IVA+K + +H + E+ +
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH-QLRREIEIQAHLH 81
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
H N ++ + + Y+ +L+ EY RG L + L T E R +++ +A+AL Y
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDE---QRTATIMEELADALMY 138
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H +IHRDI +N+LL E ++DFG + V S GT Y PE+
Sbjct: 139 CHGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMI 193
Query: 778 YTMRATEKYDVYSFGVLVFEVIKGNHP 804
EK D++ GVL +E++ GN P
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 20/206 (9%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G V+ + D VA+K G+M++ D+F+ E + ++ H V+ +G
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE----GSMSE-DDFIEEAEVMMKLSHPKLVQLYG 89
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDD--VTAKELGWNRRINVIKGVANALSYLHHDCLP 724
C LV E+++ G L+ L + A E ++V +G+A YL C
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC-- 143
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMR 781
+IHRD++++N L+ N VSDFG+ +FV +T GT +A+PE+ R
Sbjct: 144 -VIHRDLAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPEVFSFSR 200
Query: 782 ATEKYDVYSFGVLVFEVI-KGNHPRD 806
+ K DV+SFGVL++EV +G P +
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYE 226
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 601 FDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
D IG+G G V A E SG VAVK + + + NEV+ +++ +H
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLR----KQQRRELLFNEVVIMRDYQHF 102
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH 719
N V+ + G +++ E+L G+L D V+ L + V + V AL+YLH
Sbjct: 103 NVVEMYKSYLVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLH 158
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE-IAY 778
+IHRDI S ++LL + +SDFG + GT + APE I+
Sbjct: 159 AQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISR 215
Query: 779 TMRATEKYDVYSFGVLVFEVIKGNHP 804
++ ATE D++S G++V E++ G P
Sbjct: 216 SLYATE-VDIWSLGIMVIEMVDGEPP 240
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 18/218 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
DD++ + IG G V A P + VA+K+ N + +M DE L E+ A+ +
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSM---DELLKEIQAMSQCH 66
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKE-----LGWNRRINVIKGVA 712
H N V ++ +LV + L GS+ I+ V E L + +++ V
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV---GPHSSNWTE--FAG 767
L YLH + IHRD+ + N+LL + ++DFG++ F+ G + N F G
Sbjct: 127 EGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 768 TFGYAAPEIAYTMRATE-KYDVYSFGVLVFEVIKGNHP 804
T + APE+ +R + K D++SFG+ E+ G P
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G+VYK + GD VAVK N + + F NEV L++ RH N + F G
Sbjct: 18 IGSGSFGTVYKGKW-HGD-VAVKMLN--VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+ P +V ++ + SL L T E+ + I++ + A + YLH SI
Sbjct: 74 YS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSI 127
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIA----KFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
IHRD+ S N+ L + + DFG+A ++ G H + + +G+ + APE+ M+
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH--QFEQLSGSILWMAPEVI-RMQD 184
Query: 783 TEKY----DVYSFGVLVFEVIKGNHP 804
Y DVY+FG++++E++ G P
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 18/218 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
DD++ + IG G V A P + VA+K+ N + +M DE L E+ A+ +
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSM---DELLKEIQAMSQCH 71
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKE-----LGWNRRINVIKGVA 712
H N V ++ +LV + L GS+ I+ V E L + +++ V
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV---GPHSSNWTE--FAG 767
L YLH + IHRD+ + N+LL + ++DFG++ F+ G + N F G
Sbjct: 132 EGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 768 TFGYAAPEIAYTMRATE-KYDVYSFGVLVFEVIKGNHP 804
T + APE+ +R + K D++SFG+ E+ G P
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G+VYK + GD VAVK N + + F NEV L++ RH N + F G
Sbjct: 16 IGSGSFGTVYKGKW-HGD-VAVKMLN--VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+ P +V ++ + SL L T E+ + I++ + A + YLH SI
Sbjct: 72 YS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAK---SI 125
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIA----KFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
IHRD+ S N+ L + + DFG+A ++ G H + + +G+ + APE+ M+
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH--QFEQLSGSILWMAPEVI-RMQD 182
Query: 783 TEKY----DVYSFGVLVFEVIKGNHP 804
Y DVY+FG++++E++ G P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G+VYK + GD VAVK N + + F NEV L++ RH N + F G
Sbjct: 16 IGSGSFGTVYKGKW-HGD-VAVKMLN--VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+ P +V ++ + SL L T E+ + I++ + A + YLH SI
Sbjct: 72 YS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSI 125
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIA----KFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
IHRD+ S N+ L + + DFG+A ++ G H + + +G+ + APE+ M+
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH--QFEQLSGSILWMAPEVI-RMQD 182
Query: 783 TEKY----DVYSFGVLVFEVIKGNHP 804
Y DVY+FG++++E++ G P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G+VYK + GD VAVK N + + F NEV L++ RH N + F G
Sbjct: 21 IGSGSFGTVYKGKW-HGD-VAVKMLN--VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+ P +V ++ + SL L T E+ + I++ + A + YLH SI
Sbjct: 77 YS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSI 130
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIA----KFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
IHRD+ S N+ L + + DFG+A ++ G H + + +G+ + APE+ M+
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH--QFEQLSGSILWMAPEVI-RMQD 187
Query: 783 TEKY----DVYSFGVLVFEVIKGNHP 804
Y DVY+FG++++E++ G P
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 77
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+++GSL L + T K L + +++ +A+ ++Y+ +
Sbjct: 78 VVSEEP-IYIVTEYMNKGSLLDFLKGE-TGKYLRLPQLVDMSAQIASGMAYVERM---NY 132
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+A+ + + +T G + APE A R T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 190
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 191 IKSDVWSFGILLTELTTKGRVP 212
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G+VYK + GD VAVK N + + F NEV L++ RH N + F G
Sbjct: 21 IGSGSFGTVYKGKW-HGD-VAVKMLN--VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+ P +V ++ + SL L T E+ + I++ + A + YLH SI
Sbjct: 77 YS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSI 130
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIA----KFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
IHRD+ S N+ L + + DFG+A ++ G H + + +G+ + APE+ M+
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH--QFEQLSGSILWMAPEVI-RMQD 187
Query: 783 TEKY----DVYSFGVLVFEVIKGNHP 804
Y DVY+FG++++E++ G P
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 109/211 (51%), Gaps = 32/211 (15%)
Query: 608 GKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNE--VLALKEIRHRNNVKFH 665
+G G V+KA+L + + VAVK F Q D + NE V +L ++H N ++F
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQ-------DKQSWQNEYEVYSLPGMKHENILQFI 84
Query: 666 GFCYNGPHS----FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHD 721
G G +L+ + ++GSL+ L +V + WN ++ + +A L+YLH D
Sbjct: 85 GAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVS----WNELCHIAETMARGLAYLHED 140
Query: 722 C-------LPSIIHRDISSKNVLLDSNFEAHVSDFGIA-KFVGPHSSNWTE-FAGTFGYA 772
P+I HRDI SKNVLL +N A ++DFG+A KF S+ T GT Y
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 773 APE-----IAYTMRATEKYDVYSFGVLVFEV 798
APE I + A + D+Y+ G++++E+
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G+VYK + GD VAVK N + + F NEV L++ RH N + F G
Sbjct: 36 IGSGSFGTVYKGKW-HGD-VAVKMLN--VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+ P +V ++ + SL L T E+ + I++ + A + YLH SI
Sbjct: 92 YS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSI 145
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIA----KFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
IHRD+ S N+ L + + DFG+A ++ G H + + +G+ + APE+ M+
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH--QFEQLSGSILWMAPEVI-RMQD 202
Query: 783 TEKY----DVYSFGVLVFEVIKGNHP 804
Y DVY+FG++++E++ G P
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G+VYK + GD VAVK N + + F NEV L++ RH N + F G
Sbjct: 43 IGSGSFGTVYKGKW-HGD-VAVKMLN--VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+ P +V ++ + SL L T E+ + I++ + A + YLH SI
Sbjct: 99 YS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSI 152
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIA----KFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
IHRD+ S N+ L + + DFG+A ++ G H + + +G+ + APE+ M+
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH--QFEQLSGSILWMAPEVI-RMQD 209
Query: 783 TEKY----DVYSFGVLVFEVIKGNHP 804
Y DVY+FG++++E++ G P
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K+IRH V+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKIRHEKLVQLYA 80
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+ +GSL L ++ K L + +++ +A+ ++Y+ +
Sbjct: 81 VVSEEP-IYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+A+ + + +T G + APE A R T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G+VYK + GD VAVK N + + F NEV L++ RH N + F G
Sbjct: 44 IGSGSFGTVYKGKW-HGD-VAVKMLN--VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+ P +V ++ + SL L T E+ + I++ + A + YLH SI
Sbjct: 100 YS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSI 153
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIA----KFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
IHRD+ S N+ L + + DFG+A ++ G H + + +G+ + APE+ M+
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH--QFEQLSGSILWMAPEVI-RMQD 210
Query: 783 TEKY----DVYSFGVLVFEVIKGNHP 804
Y DVY+FG++++E++ G P
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G+VYK + GD VAVK N + + F NEV L++ RH N + F G
Sbjct: 44 IGSGSFGTVYKGKW-HGD-VAVKMLN--VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+ P +V ++ + SL L T E+ + I++ + A + YLH SI
Sbjct: 100 YS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSI 153
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIA----KFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
IHRD+ S N+ L + + DFG+A ++ G H + + +G+ + APE+ M+
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH--QFEQLSGSILWMAPEVI-RMQD 210
Query: 783 TEKY----DVYSFGVLVFEVIKGNHP 804
Y DVY+FG++++E++ G P
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 246
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+ +GSL L + T K L + +++ +A+ ++Y+ +
Sbjct: 247 VVSEEP-IYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+A+ + + +T G + APE A R T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 246
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+ +GSL L + T K L + +++ +A+ ++Y+ +
Sbjct: 247 VVSEEP-IYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+A+ + + +T G + APE A R T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+ +GSL L ++ K L + +++ +A+ ++Y+ +
Sbjct: 81 VVSEEP-IYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+++ N+L+ N V+DFG+A+ + + +T G + APE A R T
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 25/207 (12%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V KA+ + D VA+K+ S+ ++ F+ E+ L + H N VK +G
Sbjct: 17 VGRGAFGVVCKAKWRAKD-VAIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYG 69
Query: 667 FCYNGPHSFLVCEYLDRGSLARIL-GDD-----VTAKELGWNRRINVIKGVANALSYLHH 720
C N LV EY + GSL +L G + A + W + +GVA YLH
Sbjct: 70 ACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC--LQCSQGVA----YLHS 121
Query: 721 DCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT 779
++IHRD+ N+LL + + DFG A + H +N G+ + APE+
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAWMAPEVFEG 178
Query: 780 MRATEKYDVYSFGVLVFEVIKGNHPRD 806
+EK DV+S+G++++EVI P D
Sbjct: 179 SNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 25/207 (12%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V KA+ + D VA+K+ S+ ++ F+ E+ L + H N VK +G
Sbjct: 16 VGRGAFGVVCKAKWRAKD-VAIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 667 FCYNGPHSFLVCEYLDRGSLARIL-GDD-----VTAKELGWNRRINVIKGVANALSYLHH 720
C N LV EY + GSL +L G + A + W + +GVA YLH
Sbjct: 69 ACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC--LQCSQGVA----YLHS 120
Query: 721 DCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT 779
++IHRD+ N+LL + + DFG A + H +N G+ + APE+
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAWMAPEVFEG 177
Query: 780 MRATEKYDVYSFGVLVFEVIKGNHPRD 806
+EK DV+S+G++++EVI P D
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 28/213 (13%)
Query: 607 IGKGGQGSVYKAELPS----GDIVAVKKFNSQLLSGNMADHD--EFLNEVLALKEIRHRN 660
IG G G V + L + VA+K L G + EFL+E + + H N
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKT-----LKGGYTERQRREFLSEASIMGQFEHPN 78
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLA---RILGDDVTAKELGWNRRINVIKGVANALSY 717
++ G N ++ E+++ G+L R+ T +L + +++G+A+ + Y
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-----VGMLRGIASGMRY 133
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG-----YA 772
L S +HRD++++N+L++SN VSDFG+++F+ +SS+ TE + G +
Sbjct: 134 LAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT 190
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIK-GNHP 804
APE + T D +S+G++++EV+ G P
Sbjct: 191 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 329
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+ +GSL L + T K L + +++ +A+ ++Y+ +
Sbjct: 330 VVSEEP-IYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERM---NY 384
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+A+ + + +T G + APE A R T
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 443 IKSDVWSFGILLTELTTKGRVP 464
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 246
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+ +GSL L + T K L + +++ +A+ ++Y+ +
Sbjct: 247 VVSEEP-IYIVGEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+A+ + + +T G + APE A R T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP 381
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+ +GSL L ++ K L + +++ +A+ ++Y+ +
Sbjct: 81 VVSEEP-IYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+A+ + + +T G + APE A R T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G V+ + D VA+K G M++ D F+ E + ++ H V+ +G
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE----GAMSEED-FIEEAEVMMKLSHPKLVQLYG 70
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDD--VTAKELGWNRRINVIKGVANALSYLHHDCLP 724
C LV E+++ G L+ L + A E ++V +G+A YL C
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC-- 124
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMR 781
+IHRD++++N L+ N VSDFG+ +FV +T GT +A+PE+ R
Sbjct: 125 -VIHRDLAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPEVFSFSR 181
Query: 782 ATEKYDVYSFGVLVFEV 798
+ K DV+SFGVL++EV
Sbjct: 182 YSSKSDVWSFGVLMWEV 198
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+ +GSL L ++ K L + +++ +A+ ++Y+ +
Sbjct: 81 VVSEEP-IYIVIEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+A+ + + +T G + APE A R T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L GNM+ + FL E +K++RH V+ +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYA 247
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+ +GSL L ++ K L + +++ +A+ ++Y+ +
Sbjct: 248 VVSEEP-IYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNY 302
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+ + + + +T G + APE A R T
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 360
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 361 IKSDVWSFGILLTELTTKGRVP 382
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 15/220 (6%)
Query: 583 LNFDGKIMHEEIIKATDDFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMA 641
L F G +++ D K +G G G VY+ + VAVK L +
Sbjct: 10 LYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTM 64
Query: 642 DHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGW 701
+ +EFL E +KEI+H N V+ G C P +++ E++ G+L L + +E+
Sbjct: 65 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNA 123
Query: 702 NRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN 761
+ + +++A+ YL + IHRD++++N L+ N V+DFG+++ +
Sbjct: 124 VVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDT 178
Query: 762 WTEFAGT---FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+T AG + APE + + K DV++FGVL++E+
Sbjct: 179 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 218
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 33/222 (14%)
Query: 607 IGKGGQGSVYKAEL----PSGD--IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G+G G V+ AE P+ D +VAVK L A +F E L ++H +
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL----AARKDFQREAELLTNLQHEH 78
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARIL------------GDDVTAK-ELGWNRRINV 707
VKF+G C +G +V EY+ G L + L G AK ELG ++ +++
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A+ + YL +HRD++++N L+ +N + DFG+++ V +S+++ G
Sbjct: 139 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDV--YSTDYYRVGG 193
Query: 768 ----TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHP 804
+ PE + T + DV+SFGV+++E+ G P
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 601 FDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
FD +G+G GSVYKA +G IVA+K+ + +D E + E+ +++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE------SDLQEIIKEISIMQQCDSP 84
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH 719
+ VK++G + ++V EY GS++ I+ + K L + +++ L YLH
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLH 142
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT 779
IHRDI + N+LL++ A ++DFG+A + + GT + APE+
Sbjct: 143 ---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQE 199
Query: 780 MRATEKYDVYSFGVLVFEVIKGNHP 804
+ D++S G+ E+ +G P
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+ +GSL L ++ K L + +++ +A+ ++Y+ +
Sbjct: 81 VVSEEP-IYIVIEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
+HRD+ + N+L+ N V+DFG+A+ + + + A + APE A R T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 786 YDVYSFGVLVFEV-IKGNHP 804
DV+SFG+L+ E+ KG P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G V+ + D VA+K G M++ D F+ E + ++ H V+ +G
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE----GAMSEED-FIEEAEVMMKLSHPKLVQLYG 67
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDD--VTAKELGWNRRINVIKGVANALSYLHHDCLP 724
C LV E+++ G L+ L + A E ++V +G+A YL C
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC-- 121
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMR 781
+IHRD++++N L+ N VSDFG+ +FV +T GT +A+PE+ R
Sbjct: 122 -VIHRDLAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPEVFSFSR 178
Query: 782 ATEKYDVYSFGVLVFEV 798
+ K DV+SFGVL++EV
Sbjct: 179 YSSKSDVWSFGVLMWEV 195
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G V+ + D VA+K G M++ D F+ E + ++ H V+ +G
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE----GAMSEED-FIEEAEVMMKLSHPKLVQLYG 72
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDD--VTAKELGWNRRINVIKGVANALSYLHHDCLP 724
C LV E+++ G L+ L + A E ++V +G+A YL C
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC-- 126
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMR 781
+IHRD++++N L+ N VSDFG+ +FV +T GT +A+PE+ R
Sbjct: 127 -VIHRDLAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPEVFSFSR 183
Query: 782 ATEKYDVYSFGVLVFEV 798
+ K DV+SFGVL++EV
Sbjct: 184 YSSKSDVWSFGVLMWEV 200
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G V+ + D VA+K G M++ D F+ E + ++ H V+ +G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE----GAMSEED-FIEEAEVMMKLSHPKLVQLYG 69
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDD--VTAKELGWNRRINVIKGVANALSYLHHDCLP 724
C LV E+++ G L+ L + A E ++V +G+A YL C
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC-- 123
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMR 781
+IHRD++++N L+ N VSDFG+ +FV +T GT +A+PE+ R
Sbjct: 124 -VIHRDLAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 782 ATEKYDVYSFGVLVFEV 798
+ K DV+SFGVL++EV
Sbjct: 181 YSSKSDVWSFGVLMWEV 197
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 73
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 187
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 32/224 (14%)
Query: 604 KFCIGKGGQGSVYKAE----LPSGD--IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
K+ +G+G G V+ AE LP D +VAVK L + + +F E L ++
Sbjct: 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKA----LKEASESARQDFQREAELLTMLQ 101
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARIL------------GDDVTAKELGWNRRI 705
H++ V+F G C G +V EY+ G L R L G+DV LG + +
Sbjct: 102 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 161
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF 765
V VA + YL +HRD++++N L+ + DFG+++ + +S+++
Sbjct: 162 AVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI--YSTDYYRV 216
Query: 766 AGT----FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHP 804
G + PE + T + DV+SFGV+++E+ G P
Sbjct: 217 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V + VAVK + G+M++ DEF E + ++ H VKF+G
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVK----MIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYG 70
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
C ++V EY+ G L L K L ++ + + V +++L
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESH---QF 125
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPH---SSNWTEFAGTFGYAAPEIAYTMRAT 783
IHRD++++N L+D + VSDFG+ ++V SS T+F ++APE+ + + +
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP--VKWSAPEVFHYFKYS 183
Query: 784 EKYDVYSFGVLVFEVIK-GNHPRD 806
K DV++FG+L++EV G P D
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 73
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 187
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 73
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 187
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 182
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 72
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 132 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 186
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 187 SLAYNKFSIKSDVWAFGVLLWEI 209
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 182
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 182
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 25/208 (12%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY + VAVK L + + +EFL E +KEI+H
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 87
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARIL----GDDVTAKELGWNRRINVIKGVANA 714
N V+ G C P ++V EY+ G+L L ++VTA L + + +++A
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL-----LYMATQISSA 142
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGY 771
+ YL + IHRD++++N L+ N V+DFG+++ + +T AG +
Sbjct: 143 MEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMT--GDTYTAHAGAKFPIKW 197
Query: 772 AAPE-IAYTMRATEKYDVYSFGVLVFEV 798
APE +AY + K DV++FGVL++E+
Sbjct: 198 TAPESLAYNTFSI-KSDVWAFGVLLWEI 224
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 79.7 bits (195), Expect = 6e-15, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 73
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 74 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 187
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 79.7 bits (195), Expect = 6e-15, Method: Composition-based stats.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 73
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+ +GSL L + T K L + +++ +A+ ++Y+ +
Sbjct: 74 VVSEEP-IYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNY 128
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+A+ + + +T G + APE A R T
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 186
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 187 IKSDVWSFGILLTELTTKGRVP 208
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 182
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 182
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 70
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 130 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 184
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+ +G L L ++ K L + +++ +A+ ++Y+ +
Sbjct: 81 VVSEEP-IYIVTEYMSKGCLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+A+ + + +T G + APE A R T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 68
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 182
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 32/224 (14%)
Query: 604 KFCIGKGGQGSVYKAE----LPSGD--IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
K+ +G+G G V+ AE LP D +VAVK L + + +F E L ++
Sbjct: 23 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKA----LKEASESARQDFQREAELLTMLQ 78
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARIL------------GDDVTAKELGWNRRI 705
H++ V+F G C G +V EY+ G L R L G+DV LG + +
Sbjct: 79 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 138
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF 765
V VA + YL +HRD++++N L+ + DFG+++ + +S+++
Sbjct: 139 AVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI--YSTDYYRV 193
Query: 766 AGT----FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHP 804
G + PE + T + DV+SFGV+++E+ G P
Sbjct: 194 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+ +G L L ++ K L + +++ +A+ ++Y+ +
Sbjct: 81 VVSEEP-IYIVMEYMSKGCLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NY 135
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+A+ + + +T G + APE A R T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 70
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 130 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 184
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 10/209 (4%)
Query: 599 DDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
DDFD +GKG G+VY A E + I+A+K L +H + E+ +R
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH-QLRREIEIQSHLR 72
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
H N ++ + + ++ +L+ E+ RG L + L E R ++ +A+AL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHY 129
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H +IHRDI +N+L+ E ++DFG + V S GT Y PE+
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 778 YTMRATEKYDVYSFGVLVFEVIKGNHPRD 806
EK D++ GVL +E + G P D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 32/224 (14%)
Query: 604 KFCIGKGGQGSVYKAE----LPSGD--IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
K+ +G+G G V+ AE LP D +VAVK L + + +F E L ++
Sbjct: 17 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKA----LKEASESARQDFQREAELLTMLQ 72
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARIL------------GDDVTAKELGWNRRI 705
H++ V+F G C G +V EY+ G L R L G+DV LG + +
Sbjct: 73 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 132
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF 765
V VA + YL +HRD++++N L+ + DFG+++ + +S+++
Sbjct: 133 AVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI--YSTDYYRV 187
Query: 766 AGT----FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHP 804
G + PE + T + DV+SFGV+++E+ G P
Sbjct: 188 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 10/209 (4%)
Query: 599 DDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
DDFD +GKG G+VY A E + I+A+K L +H + E+ +R
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH-QLRREIEIQSHLR 73
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
H N ++ + + ++ +L+ E+ RG L + L E R ++ +A+AL Y
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHY 130
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H +IHRDI +N+L+ E ++DFG + V S GT Y PE+
Sbjct: 131 CHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMI 185
Query: 778 YTMRATEKYDVYSFGVLVFEVIKGNHPRD 806
EK D++ GVL +E + G P D
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 66
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTFTAHAGAKFPIKWTAPE 180
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 69
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 129 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAPAGAKFPIKWTAPE 183
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 10/209 (4%)
Query: 599 DDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
DDFD +GKG G+VY A E + I+A+K L +H + E+ +R
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH-QLRREIEIQSHLR 72
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
H N ++ + + ++ +L+ E+ RG L + L E R ++ +A+AL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHY 129
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H +IHRDI +N+L+ E ++DFG + V S GT Y PE+
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 778 YTMRATEKYDVYSFGVLVFEVIKGNHPRD 806
EK D++ GVL +E + G P D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G+VY A ++ + ++VA+KK + N D + EV L+++RH N +++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD-IIKEVRFLQKLRHPNTIQYR 120
Query: 666 GFCYNGPHS-FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
G CY H+ +LV EY GS + +L +V K L V G L+YLH
Sbjct: 121 G-CYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLHSH--- 173
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATE 784
++IHRD+ + N+LL + DFG A + P + F GT + APE+ M +
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDEGQ 229
Query: 785 ---KYDVYSFGVLVFEVIKGNHP 804
K DV+S G+ E+ + P
Sbjct: 230 YDGKVDVWSLGITCIELAERKPP 252
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 107/214 (50%), Gaps = 30/214 (14%)
Query: 607 IGKGGQGSVYKAELPS----GDIVAVKKFNSQLLSGNMADHD--EFLNEVLALKEIRHRN 660
IG G G V + L + VA+K L G + EFL+E + + H N
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKT-----LKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLA---RILGDDVTAKELGWNRRINVIKGVANALSY 717
++ G N ++ E+++ G+L R+ T +L + +++G+A+ + Y
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-----VGMLRGIASGMRY 131
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG------Y 771
L S +HRD++++N+L++SN VSDFG+++F+ +SS+ T + + G +
Sbjct: 132 LAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT-YTSSLGGKIPIRW 187
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHP 804
APE + T D +S+G++++EV+ G P
Sbjct: 188 TAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G V+ + D VA+K G M++ D F+ E + ++ H V+ +G
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE----GAMSEED-FIEEAEVMMKLSHPKLVQLYG 69
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDD--VTAKELGWNRRINVIKGVANALSYLHHDCLP 724
C LV E+++ G L+ L + A E ++V +G+A YL
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEE---A 122
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMR 781
S+IHRD++++N L+ N VSDFG+ +FV +T GT +A+PE+ R
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 782 ATEKYDVYSFGVLVFEV 798
+ K DV+SFGVL++EV
Sbjct: 181 YSSKSDVWSFGVLMWEV 197
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 70
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 130 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAPAGAKFPIKWTAPE 184
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 69
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + + T AG + APE
Sbjct: 129 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 183
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G+VY A ++ + ++VA+KK + N D + EV L+++RH N +++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD-IIKEVRFLQKLRHPNTIQYR 81
Query: 666 GFCYNGPHS-FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
G CY H+ +LV EY GS + +L +V K L V G L+YLH
Sbjct: 82 G-CYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLHSH--- 134
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATE 784
++IHRD+ + N+LL + DFG A + P + F GT + APE+ M +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDEGQ 190
Query: 785 ---KYDVYSFGVLVFEVIKGNHP 804
K DV+S G+ E+ + P
Sbjct: 191 YDGKVDVWSLGITCIELAERKPP 213
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 73
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + + T AG + APE
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 187
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 66
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + + T AG + APE
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 180
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 69
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+ +GSL L ++ K L + +++ +A+ ++Y+ +
Sbjct: 70 VVSEEP-IYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNY 124
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+A+ + + +T G + APE A R T
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 182
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 183 IKSDVWSFGILLTELTTKGRVP 204
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 71
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+ +GSL L ++ K L + +++ +A+ ++Y+ +
Sbjct: 72 VVSEEP-IYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVER---MNY 126
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD+ + N+L+ N V+DFG+A+ + + +T G + APE A R T
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 184
Query: 784 EKYDVYSFGVLVFEV-IKGNHP 804
K DV+SFG+L+ E+ KG P
Sbjct: 185 IKSDVWSFGILLTELTTKGRVP 206
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 10/207 (4%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNM--ADHDEFLNEVLALKEI 656
+D++ + IG G G K S + V K +L G+M A+ ++EV L+E+
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWK---ELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 657 RHRNNVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKE-LGWNRRINVIKGVAN 713
+H N V+++ + ++ ++V EY + G LA ++ ++ L + V+ +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 714 ALSYLHH--DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGY 771
AL H D +++HRD+ NV LD + DFG+A+ + EF GT Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYY 182
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEV 798
+PE M EK D++S G L++E+
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVK-----TLKEDTMEVEEFLKEAAVMKEIKH 275
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 334
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHR+++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 335 EKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 389
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 390 SLAYNKFSIKSDVWAFGVLLWEI 412
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVK-----TLKEDTMEVEEFLKEAAVMKEIKH 272
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 273 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 331
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHR+++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 332 EKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 386
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 387 SLAYNKFSIKSDVWAFGVLLWEI 409
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 10/207 (4%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNM--ADHDEFLNEVLALKEI 656
+D++ + IG G G K S + V K +L G+M A+ ++EV L+E+
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWK---ELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 657 RHRNNVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKE-LGWNRRINVIKGVAN 713
+H N V+++ + ++ ++V EY + G LA ++ ++ L + V+ +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 714 ALSYLHH--DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGY 771
AL H D +++HRD+ NV LD + DFG+A+ + +S F GT Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYY 182
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEV 798
+PE M EK D++S G L++E+
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 606 CIGKGGQGSVYKAELPSGD-----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
IG G G VYK L + VA+K + D FL E + + H N
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD---FLGEAGIMGQFSHHN 107
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHH 720
++ G ++ EY++ G+L + L + E + + +++G+A + YL +
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLAN 165
Query: 721 DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPH-SSNWTEFAGT--FGYAAPEIA 777
+ +HRD++++N+L++SN VSDFG+++ + + +T G + APE
Sbjct: 166 ---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 778 YTMRATEKYDVYSFGVLVFEVIK-GNHP 804
+ T DV+SFG++++EV+ G P
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 10/207 (4%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNM--ADHDEFLNEVLALKEI 656
+D++ + IG G G K S + V K +L G+M A+ ++EV L+E+
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWK---ELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 657 RHRNNVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKE-LGWNRRINVIKGVAN 713
+H N V+++ + ++ ++V EY + G LA ++ ++ L + V+ +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 714 ALSYLHH--DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGY 771
AL H D +++HRD+ NV LD + DFG+A+ + +S F GT Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYY 182
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEV 798
+PE M EK D++S G L++E+
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKT-----LKEDTMEVEEFLKEAAVMKEIKH 66
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHRD++++N L+ N V+DFG+++ + + T AG + APE
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 180
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
D K +G G G VY+ + VAVK L + + +EFL E +KEI+H
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVK-----TLKEDTMEVEEFLKEAAVMKEIKH 314
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
N V+ G C P +++ E++ G+L L + +E+ + + +++A+ YL
Sbjct: 315 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 373
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPE 775
+ IHR+++++N L+ N V+DFG+++ + +T AG + APE
Sbjct: 374 EKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPE 428
Query: 776 IAYTMRATEKYDVYSFGVLVFEV 798
+ + K DV++FGVL++E+
Sbjct: 429 SLAYNKFSIKSDVWAFGVLLWEI 451
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ VA+K L G M+ + FL E +K+++H V+ +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKT----LKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYA 71
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P ++V EY+++GSL L D + L +++ VA ++Y+ +
Sbjct: 72 VVSEEP-IYIVTEYMNKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIERM---NY 126
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ S N+L+ + ++DFG+A+ + + + A + APE A R T K
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 786 YDVYSFGVLVFE-VIKGNHP 804
DV+SFG+L+ E V KG P
Sbjct: 187 SDVWSFGILLTELVTKGRVP 206
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 608 GKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGF 667
+G G V+KA+L D VAVK F Q ++ E+ + ++H N ++F
Sbjct: 24 ARGRFGCVWKAQL-MNDFVAVKIFPLQDKQSWQSE-----REIFSTPGMKHENLLQFIAA 77
Query: 668 CYNGP----HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC- 722
G +L+ + D+GSL L ++ + WN +V + ++ LSYLH D
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHEDVP 133
Query: 723 -------LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAA 773
PSI HRD SKNVLL S+ A ++DFG+A P + GT Y A
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 774 PE-----IAYTMRATEKYDVYSFGVLVFEVI 799
PE I + A + D+Y+ G++++E++
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 11/211 (5%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQ-LLSGNMADHDEFLNEVLALKEI 656
+DF +GKG VY+AE + +G VA+K + + + M + NEV ++
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQ--NEVKIHCQL 68
Query: 657 RHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALS 716
+H + ++ + + + + +LV E G + R L + V K N + + + +
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGML 126
Query: 717 YLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIA-KFVGPHSSNWTEFAGTFGYAAPE 775
YLH I+HRD++ N+LL N ++DFG+A + PH ++T GT Y +PE
Sbjct: 127 YLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPE 182
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHPRD 806
IA + DV+S G + + ++ G P D
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G V+ VA+K L G M+ + FL E +K++RH V+ +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKT----LKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYA 70
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +V EY+ +GSL L + T K L + +++ +A+ ++Y+ +
Sbjct: 71 VVSEEPIX-IVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNY 125
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
+HRD+ + N+L+ N V+DFG+A+ + + + A + APE A R T K
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 786 YDVYSFGVLVFEV-IKGNHP 804
DV+SFG+L+ E+ KG P
Sbjct: 186 SDVWSFGILLTELTTKGRVP 205
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG+G G VYKA+ G+ A+KK +L + + E+ LKE++H N VK +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 667 FCYNGPHSFLVCEYLDRGSLARILG------DDVTAKELGWNRRINVIKGVANALSYLHH 720
+ LV E+LD+ L ++L + VTAK + + + N ++Y H
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAK--------SFLLQLLNGIAYCHD 118
Query: 721 DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTM 780
++HRD+ +N+L++ E ++DFG+A+ G +T T Y AP++ +
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV---L 172
Query: 781 RATEKY----DVYSFGVLVFEVIKGN 802
++KY D++S G + E++ G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGT 198
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 27/205 (13%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG+G G VYKA+ G+ A+KK +L + + E+ LKE++H N VK +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 667 FCYNGPHSFLVCEYLDRGSLARILG------DDVTAKELGWNRRINVIKGVANALSYLHH 720
+ LV E+LD+ L ++L + VTAK + + + N ++Y H
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAK--------SFLLQLLNGIAYCHD 118
Query: 721 DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTM 780
++HRD+ +N+L++ E ++DFG+A+ G +T T Y AP++ +
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV---L 172
Query: 781 RATEKY----DVYSFGVLVFEVIKG 801
++KY D++S G + E++ G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 599 DDFDEKFCIGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
DDF++ +G G G V+K + PSG ++A K + ++ A ++ + E+ L E
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 65
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARIL--GDDVTAKELGWNRRINVIKGVANAL 715
V F+G Y+ + E++D GSL ++L + + LG I VIKG L
Sbjct: 66 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKG----L 120
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
+YL I+HRD+ N+L++S E + DFG++ + +N EF GT Y +PE
Sbjct: 121 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRSYMSPE 176
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHPR 805
+ + D++S G+ + E+ G +PR
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPR 206
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG+G G VYKA+ G+ A+KK +L + + E+ LKE++H N VK +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI--RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 667 FCYNGPHSFLVCEYLDRGSLARILG------DDVTAKELGWNRRINVIKGVANALSYLHH 720
+ LV E+LD+ L ++L + VTAK + + + N ++Y H
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAK--------SFLLQLLNGIAYCHD 118
Query: 721 DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTM 780
++HRD+ +N+L++ E ++DFG+A+ G +T T Y AP++ +
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDV---L 172
Query: 781 RATEKY----DVYSFGVLVFEVIKGN 802
++KY D++S G + E++ G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGT 198
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 607 IGKGGQGSVYKA--ELPSGD--IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG G G V +LP VA+K S D FL+E + + H N +
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD---FLSEASIMGQFDHPNVI 97
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDD---VTAKELGWNRRINVIKGVANALSYLH 719
G ++ E+++ GSL L + T +L + +++G+A + YL
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-----VGMLRGIAAGMKYLA 152
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG-----YAAP 774
+ +HRD++++N+L++SN VSDFG+++F+ +S+ T + G + AP
Sbjct: 153 D---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 209
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIK-GNHP 804
E + T DV+S+G++++EV+ G P
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ VAVK L G+M+ D FL E +K+++H+ V+ +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA 84
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ EY++ GSL L K L N+ +++ +A ++++ +
Sbjct: 85 VVTQEP-IYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 139
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 200 SDVWSFGILLTEIV 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ VAVK L G+M+ D FL E +K+++H+ V+ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA 81
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ EY++ GSL L K L N+ +++ +A ++++ +
Sbjct: 82 VVTQEP-IYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 136
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 197 SDVWSFGILLTEIV 210
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ VAVK L G+M+ D FL E +K+++H+ V+ +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA 83
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ EY++ GSL L K L N+ +++ +A ++++ +
Sbjct: 84 VVTQEP-IYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 138
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 199 SDVWSFGILLTEIV 212
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 607 IGKGGQGSVYKAELP---SGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG G G V L D+ VA+K + D FL+E + + H N +
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD---FLSEASIMGQFDHPNII 113
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLA---RILGDDVTAKELGWNRRINVIKGVANALSYLH 719
+ G G + +V EY++ GSL R T +L + +++GV + YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL-----VGMLRGVGAGMRYLS 168
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPH-SSNWTEFAGT--FGYAAPEI 776
+HRD++++NVL+DSN VSDFG+++ + + +T G + APE
Sbjct: 169 D---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA 225
Query: 777 AYTMRATEKYDVYSFGVLVFEVIK-GNHP 804
+ DV+SFGV+++EV+ G P
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 17/214 (7%)
Query: 601 FDEKFCIGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
++ K +G GG G V + +G+ VA+K+ +L N + + E+ +K++ H
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKN---RERWCLEIQIMKKLNHP 73
Query: 660 NNVKFH----GFCYNGPHSF--LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVAN 713
N V G P+ L EY + G L + L L ++ +++
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEA---HVSDFGIAKFVGPHSSNWTEFAGTFG 770
AL YLH + IIHRD+ +N++L + + D G AK + TEF GT
Sbjct: 134 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQ 189
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APE+ + T D +SFG L FE I G P
Sbjct: 190 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 17/214 (7%)
Query: 601 FDEKFCIGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
++ K +G GG G V + +G+ VA+K+ +L N + + E+ +K++ H
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKN---RERWCLEIQIMKKLNHP 72
Query: 660 NNVKFH----GFCYNGPHSF--LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVAN 713
N V G P+ L EY + G L + L L ++ +++
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEA---HVSDFGIAKFVGPHSSNWTEFAGTFG 770
AL YLH + IIHRD+ +N++L + + D G AK + TEF GT
Sbjct: 133 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQ 188
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APE+ + T D +SFG L FE I G P
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ VAVK L G+M+ D FL E +K+++H+ V+ +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA 85
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ EY++ GSL L K L N+ +++ +A ++++ +
Sbjct: 86 VVTQEP-IYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 140
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 201 SDVWSFGILLTEIV 214
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 607 IGKGGQGSVYKAELP---SGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG G G V L D+ VA+K + D FL+E + + H N +
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD---FLSEASIMGQFDHPNII 113
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLA---RILGDDVTAKELGWNRRINVIKGVANALSYLH 719
+ G G + +V EY++ GSL R T +L + +++GV + YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL-----VGMLRGVGAGMRYLS 168
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT-FGYAAPEI 776
+HRD++++NVL+DSN VSDFG+++ + P ++ T + APE
Sbjct: 169 D---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEA 225
Query: 777 AYTMRATEKYDVYSFGVLVFEVIK-GNHP 804
+ DV+SFGV+++EV+ G P
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 30/219 (13%)
Query: 607 IGKGGQGSVYKAEL----PSGD--IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G+G G V+ AE P D +VAVK + + A D F E L ++H +
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD---ASDNARKD-FHREAELLTNLQHEH 76
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARIL---GDDVT-------AKELGWNRRINVIKG 710
VKF+G C G +V EY+ G L + L G D EL ++ +++ +
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG--- 767
+A + YL +HRD++++N L+ N + DFG+++ V +S+++ G
Sbjct: 137 IAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDV--YSTDYYRVGGHTM 191
Query: 768 -TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHP 804
+ PE + T + DV+S GV+++E+ G P
Sbjct: 192 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 15/195 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V + VA+K + G+M++ DEF+ E + + H V+ +G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIK----MIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYG 86
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
C F++ EY+ G L L + + + + K V A+ YL
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLES---KQF 141
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYAAPEIAYTMRAT 783
+HRD++++N L++ VSDFG++++V +T G+ ++ PE+ + +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 784 EKYDVYSFGVLVFEV 798
K D+++FGVL++E+
Sbjct: 200 SKSDIWAFGVLMWEI 214
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.4 bits (176), Expect = 9e-13, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ VAVK L G+M+ D FL E +K+++H+ V+ +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVK----SLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA 75
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ EY++ GSL L K L N+ +++ +A ++++ +
Sbjct: 76 VVTQEP-IYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + N+L+ ++DFG+A+ + E A + APE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 191 SDVWSFGILLTEIV 204
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 72.4 bits (176), Expect = 9e-13, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ VAVK L G+M+ D FL E +K+++H+ V+ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA 75
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ EY++ GSL L K L N+ +++ +A ++++ +
Sbjct: 76 VVTQEP-IYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 191 SDVWSFGILLTEIV 204
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.4 bits (176), Expect = 9e-13, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ VAVK L G+M+ D FL E +K+++H+ V+ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA 75
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ EY++ GSL L K L N+ +++ +A ++++ +
Sbjct: 76 VVTQEP-IYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 191 SDVWSFGILLTEIV 204
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 72.4 bits (176), Expect = 9e-13, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ VAVK L G+M+ D FL E +K+++H+ V+ +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA 76
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ EY++ GSL L K L N+ +++ +A ++++ +
Sbjct: 77 VVTQEP-IYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 131
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 192 SDVWSFGILLTEIV 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 72.4 bits (176), Expect = 9e-13, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ VAVK L G+M+ D FL E +K+++H+ V+ +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA 77
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ EY++ GSL L K L N+ +++ +A ++++ +
Sbjct: 78 VVTQEP-IYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 132
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 193 SDVWSFGILLTEIV 206
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 598 TDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI 656
TD++ +GKG V + ++P+G A K N++ LS DH + E + +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR--DHQKLEREARICRLL 60
Query: 657 RHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALS 716
+H N V+ H +LV + + G L +D+ A+E + + + L
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELF----EDIVARE--YYSEADASHCIQQILE 114
Query: 717 YLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
++H L I+HRD+ +N+LL S + ++DFG+A V W FAGT GY +
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE+ + D+++ GV+++ ++ G P
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 671 GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
GP ++V EY+D +L I+ T + R I VI AL++ H + IIHRD
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRD 141
Query: 731 ISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFA---GTFGYAAPEIAYTMRATEKYD 787
+ N+++ + V DFGIA+ + ++ T+ A GT Y +PE A + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 788 VYSFGVLVFEVIKGNHP 804
VYS G +++EV+ G P
Sbjct: 202 VYSLGCVLYEVLTGEPP 218
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
DDF+ +G G G V K + PSG I+A K + ++ A ++ + E+ L E
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECN 72
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
V F+G Y+ + E++D GSL ++L + AK + V V L+Y
Sbjct: 73 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAY 129
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
L I+HRD+ N+L++S E + DFG++ + +N F GT Y APE
Sbjct: 130 LREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMAPERL 185
Query: 778 YTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G+ + E+ G +P
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 671 GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
GP ++V EY+D +L I+ T + R I VI AL++ H + IIHRD
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRD 141
Query: 731 ISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFA---GTFGYAAPEIAYTMRATEKYD 787
+ N+++ + V DFGIA+ + ++ T+ A GT Y +PE A + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 788 VYSFGVLVFEVIKGNHP 804
VYS G +++EV+ G P
Sbjct: 202 VYSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 671 GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
GP ++V EY+D +L I+ T + R I VI AL++ H + IIHRD
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRD 141
Query: 731 ISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFA---GTFGYAAPEIAYTMRATEKYD 787
+ N+++ + V DFGIA+ + ++ T+ A GT Y +PE A + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 788 VYSFGVLVFEVIKGNHP 804
VYS G +++EV+ G P
Sbjct: 202 VYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 671 GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
GP ++V EY+D +L I+ T + R I VI AL++ H + IIHRD
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRD 141
Query: 731 ISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFA---GTFGYAAPEIAYTMRATEKYD 787
+ N+++ + V DFGIA+ + ++ T+ A GT Y +PE A + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 788 VYSFGVLVFEVIKGNHP 804
VYS G +++EV+ G P
Sbjct: 202 VYSLGCVLYEVLTGEPP 218
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 598 TDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI 656
TD++ +GKG V + ++P+G A K N++ LS DH + E + +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR--DHQKLEREARICRLL 60
Query: 657 RHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALS 716
+H N V+ H +LV + + G L +D+ A+E + + + L
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELF----EDIVARE--YYSEADASHCIQQILE 114
Query: 717 YLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
++H L I+HRD+ +N+LL S + ++DFG+A V W FAGT GY +
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE+ + D+++ GV+++ ++ G P
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 112
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + YL
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 167
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ + H+ + +
Sbjct: 168 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKWM 222
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 113
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + YL
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 168
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ + H+ + +
Sbjct: 169 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKWM 223
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ VAVK L G+M+ D FL E +K+++H+ V+ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA 81
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ EY++ GSL L K L N+ +++ +A ++++ +
Sbjct: 82 VVTQEP-IYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 136
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 197 SDVWSFGILLTEIV 210
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ VAVK L G+M+ D FL E +K+++H+ V+ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA 75
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ EY++ GSL L K L N+ +++ +A ++++ +
Sbjct: 76 VVTQEP-IYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 191 SDVWSFGILLTEIV 204
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ VAVK L G+M+ D FL E +K+++H+ V+ +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA 70
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ EY++ GSL L K L N+ +++ +A ++++ +
Sbjct: 71 VVTQEP-IYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 125
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 186 SDVWSFGILLTEIV 199
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ VAVK L G+M+ D FL E +K+++H+ V+ +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA 80
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ EY++ GSL L K L N+ +++ +A ++++ +
Sbjct: 81 VVTQEP-IYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 135
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 196 SDVWSFGILLTEIV 209
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 671 GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
GP ++V EY+D +L I+ T + R I VI AL++ H + IIHRD
Sbjct: 105 GPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRD 158
Query: 731 ISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFA---GTFGYAAPEIAYTMRATEKYD 787
+ N+++ + V DFGIA+ + ++ T+ A GT Y +PE A + D
Sbjct: 159 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 218
Query: 788 VYSFGVLVFEVIKGNHP 804
VYS G +++EV+ G P
Sbjct: 219 VYSLGCVLYEVLTGEPP 235
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V + VA+K + G+M++ DEF+ E + + H V+ +G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIK----MIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYG 86
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
C F++ EY+ G L L + + + + K V A+ YL
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLES---KQF 141
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFV---GPHSSNWTEFAGTFGYAAPEIAYTMRAT 783
+HRD++++N L++ VSDFG++++V SS ++F ++ PE+ + +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFP--VRWSPPEVLMYSKFS 199
Query: 784 EKYDVYSFGVLVFEV 798
K D+++FGVL++E+
Sbjct: 200 SKSDIWAFGVLMWEI 214
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 599 DDFDEKFCIGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
DDF++ +G G G V+K + PSG ++A K + ++ A ++ + E+ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARIL--GDDVTAKELGWNRRINVIKGVANAL 715
V F+G Y+ + E++D GSL ++L + + LG I VIKG L
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKG----L 117
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
+YL I+HRD+ N+L++S E + DFG++ + +N F GT Y +PE
Sbjct: 118 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G+ + E+ G +P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 86
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + YL
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 141
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ + H+ + +
Sbjct: 142 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKWM 196
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 599 DDFDEKFCIGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
DDF++ +G G G V+K + PSG ++A K + ++ A ++ + E+ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARIL--GDDVTAKELGWNRRINVIKGVANAL 715
V F+G Y+ + E++D GSL ++L + + LG I VIKG L
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKG----L 117
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
+YL I+HRD+ N+L++S E + DFG++ + +N F GT Y +PE
Sbjct: 118 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G+ + E+ G +P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 19/236 (8%)
Query: 572 NSMNRLRLLSVLNFDGKIMHEEIIKATDDFDEKFCIGKGGQGSVYK-AELPSGDIVAVKK 630
+ R RL + L K+ + DDF++ +G G G V+K + PSG ++A K
Sbjct: 45 DEQQRKRLEAFLTQKQKVGELK----DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKL 100
Query: 631 FNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARIL 690
+ ++ A ++ + E+ L E V F+G Y+ + E++D GSL ++L
Sbjct: 101 IHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL 157
Query: 691 --GDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSD 748
+ + LG I VIKG L+YL I+HRD+ N+L++S E + D
Sbjct: 158 KKAGRIPEQILG-KVSIAVIKG----LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCD 210
Query: 749 FGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
FG++ + +N F GT Y +PE + + D++S G+ + E+ G +P
Sbjct: 211 FGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 599 DDFDEKFCIGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
DDF++ +G G G V+K + PSG ++A K + ++ A ++ + E+ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARIL--GDDVTAKELGWNRRINVIKGVANAL 715
V F+G Y+ + E++D GSL ++L + + LG I VIKG L
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKG----L 117
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
+YL I+HRD+ N+L++S E + DFG++ + +N F GT Y +PE
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G+ + E+ G +P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 599 DDFDEKFCIGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
DDF++ +G G G V+K + PSG ++A K + ++ A ++ + E+ L E
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 81
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARIL--GDDVTAKELGWNRRINVIKGVANAL 715
V F+G Y+ + E++D GSL ++L + + LG I VIKG L
Sbjct: 82 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKG----L 136
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
+YL I+HRD+ N+L++S E + DFG++ + +N F GT Y +PE
Sbjct: 137 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 192
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G+ + E+ G +P
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 599 DDFDEKFCIGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
DDF++ +G G G V+K + PSG ++A K + ++ A ++ + E+ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARIL--GDDVTAKELGWNRRINVIKGVANAL 715
V F+G Y+ + E++D GSL ++L + + LG I VIKG L
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKG----L 117
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
+YL I+HRD+ N+L++S E + DFG++ + +N F GT Y +PE
Sbjct: 118 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G+ + E+ G +P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 599 DDFDEKFCIGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
DDF++ +G G G V+K + PSG ++A K + ++ A ++ + E+ L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECN 62
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARIL--GDDVTAKELGWNRRINVIKGVANAL 715
V F+G Y+ + E++D GSL ++L + + LG I VIKG L
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKG----L 117
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
+YL I+HRD+ N+L++S E + DFG++ + +N F GT Y +PE
Sbjct: 118 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G+ + E+ G +P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 19/241 (7%)
Query: 567 QEEQSNSMNRLRLLSVLNFDGKIMHEEIIKATDDFDEKFCIGKGGQGSVYK-AELPSGDI 625
+E + + R RL + L K+ + DDF++ +G G G V+K + PSG +
Sbjct: 5 EELELDEQQRKRLEAFLTQKQKVGELK----DDDFEKISELGAGNGGVVFKVSHKPSGLV 60
Query: 626 VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGS 685
+A K + ++ A ++ + E+ L E V F+G Y+ + E++D GS
Sbjct: 61 MARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 117
Query: 686 LARIL--GDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE 743
L ++L + + LG I VIKG L+YL I+HRD+ N+L++S E
Sbjct: 118 LDQVLKKAGRIPEQILG-KVSIAVIKG----LTYLREK--HKIMHRDVKPSNILVNSRGE 170
Query: 744 AHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNH 803
+ DFG++ + +N F GT Y +PE + + D++S G+ + E+ G +
Sbjct: 171 IKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 228
Query: 804 P 804
P
Sbjct: 229 P 229
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 94
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 149
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ + H+ + +
Sbjct: 150 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKWM 204
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 93
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 148
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSS----NWTEFAGTFGYAAP 774
+HRD++++N +LD F V+DFG+A+ + N T + A
Sbjct: 149 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMAL 205
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
E T + T K DV+SFGVL++E++ P
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 91
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + YL
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 146
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ + H+ + +
Sbjct: 147 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKWM 201
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 607 IGKGGQGSVYKA--ELPSGD--IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG G G V +LP VA+K S D FL+E + + H N +
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD---FLSEASIMGQFDHPNVI 71
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDD---VTAKELGWNRRINVIKGVANALSYLH 719
G ++ E+++ GSL L + T +L + +++G+A + YL
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-----VGMLRGIAAGMKYLA 126
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG-----YAAP 774
+ +HR ++++N+L++SN VSDFG+++F+ +S+ T + G + AP
Sbjct: 127 D---MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIK-GNHP 804
E + T DV+S+G++++EV+ G P
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 94
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 149
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ + H+ + +
Sbjct: 150 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKWM 204
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 93
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 148
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ + H+ + +
Sbjct: 149 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKWM 203
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG G G+VYK + GD VAVK +++ F NEV L++ RH N + F G
Sbjct: 44 IGSGSFGTVYKGKW-HGD-VAVKIL--KVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+ + +V ++ + SL + L V + + I++ + A + YLH +I
Sbjct: 100 YM-TKDNLAIVTQWCEGSSLYKHL--HVQETKFQMFQLIDIARQTAQGMDYLH---AKNI 153
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWT------EFAGTFGYAAPEIAYTM 780
IHRD+ S N+ L + DFG+A S W+ + G+ + APE+ +
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATV----KSRWSGSQQVEQPTGSVLWMAPEV---I 206
Query: 781 RATE------KYDVYSFGVLVFEVIKGNHP 804
R + + DVYS+G++++E++ G P
Sbjct: 207 RMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 92
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + YL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 147
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ + H+ + +
Sbjct: 148 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKWM 202
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 89
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + YL
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 144
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ + H+ + +
Sbjct: 145 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VKWM 199
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IGKG G V+K + + +VA+K + L + ++ E+ L + K++
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
G G +++ EYL GS +L A + ++K + L YLH +
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLL----RAGPFDEFQIATMLKEILKGLDYLHSE---K 140
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEK 785
IHRDI + NVLL + ++DFG+A + F GT + APE+ K
Sbjct: 141 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK 200
Query: 786 YDVYSFGVLVFEVIKGNHP 804
D++S G+ E+ KG P
Sbjct: 201 ADIWSLGITAIELAKGEPP 219
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
VK+ G CY+ L+ EYL GSL L A+ + + + + + YL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGMEYL 133
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AGTFGYAA 773
IHRD++++N+L+++ + DFG+ K V P + + F Y A
Sbjct: 134 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWY-A 188
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVI 799
PE + + DV+SFGV+++E+
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 638 GNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAK 697
G+M++ DEF+ E + + H V+ +G C F++ EY+ G L L +
Sbjct: 50 GSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRH 106
Query: 698 ELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757
+ + + K V A+ YL +HRD++++N L++ VSDFG++++V
Sbjct: 107 RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-- 161
Query: 758 HSSNWTEFAGT---FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+T G+ ++ PE+ + + K D+++FGVL++E+
Sbjct: 162 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 205
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 638 GNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAK 697
G+M++ DEF+ E + + H V+ +G C F++ EY+ G L L +
Sbjct: 43 GSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRH 99
Query: 698 ELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757
+ + + K V A+ YL +HRD++++N L++ VSDFG++++V
Sbjct: 100 RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-- 154
Query: 758 HSSNWTEFAGT---FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+T G+ ++ PE+ + + K D+++FGVL++E+
Sbjct: 155 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 198
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 638 GNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAK 697
G+M++ DEF+ E + + H V+ +G C F++ EY+ G L L +
Sbjct: 44 GSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRH 100
Query: 698 ELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757
+ + + K V A+ YL +HRD++++N L++ VSDFG++++V
Sbjct: 101 RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-- 155
Query: 758 HSSNWTEFAGT---FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+T G+ ++ PE+ + + K D+++FGVL++E+
Sbjct: 156 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 638 GNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAK 697
G+M++ DEF+ E + + H V+ +G C F++ EY+ G L L +
Sbjct: 39 GSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRH 95
Query: 698 ELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757
+ + + K V A+ YL +HRD++++N L++ VSDFG++++V
Sbjct: 96 RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-- 150
Query: 758 HSSNWTEFAGT---FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+T G+ ++ PE+ + + K D+++FGVL++E+
Sbjct: 151 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 194
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 19/193 (9%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ A VAVK G+M+ + FL E +K ++H VK H
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKP----GSMS-VEAFLAEANVMKTLQHDKLVKLHA 244
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ E++ +GSL L D +K+ + I+ +A ++++ +
Sbjct: 245 VVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQR---NY 299
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKY 786
IHRD+ + N+L+ ++ ++DFG+A+ WT APE T K
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT---------APEAINFGSFTIKS 350
Query: 787 DVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 351 DVWSFGILLMEIV 363
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 106/205 (51%), Gaps = 25/205 (12%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G VYKA+ G IVA+K+ +L + + + E+ LKE+ H N V
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI--RLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINV-----IKGVANALSYLHHD 721
++ LV E++++ L ++L ++ T + + +I + ++GVA+ +
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ---DSQIKIYLYQLLRGVAHCHQH---- 138
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMR 781
I+HRD+ +N+L++S+ ++DFG+A+ G ++T T Y AP++ +
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDV---LM 192
Query: 782 ATEKY----DVYSFGVLVFEVIKGN 802
++KY D++S G + E+I G
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Query: 671 GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
GP ++V EY+D +L I+ T + R I VI AL++ H + IIHRD
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRD 141
Query: 731 ISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFA---GTFGYAAPEIAYTMRATEKYD 787
+ N+L+ + V DFGIA+ + ++ + A GT Y +PE A + D
Sbjct: 142 VKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 788 VYSFGVLVFEVIKGNHP 804
VYS G +++EV+ G P
Sbjct: 202 VYSLGCVLYEVLTGEPP 218
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 106/205 (51%), Gaps = 25/205 (12%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G+G G VYKA+ G IVA+K+ +L + + + E+ LKE+ H N V
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI--RLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINV-----IKGVANALSYLHHD 721
++ LV E++++ L ++L ++ T + + +I + ++GVA+ +
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ---DSQIKIYLYQLLRGVAHCHQH---- 138
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMR 781
I+HRD+ +N+L++S+ ++DFG+A+ G ++T T Y AP++ +
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDV---LM 192
Query: 782 ATEKY----DVYSFGVLVFEVIKGN 802
++KY D++S G + E+I G
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IGKG G V + G+ VAVK N A FL E + ++RH N V+ G
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIK------NDATAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 667 FCYNGPHS-FLVCEYLDRGSLA---RILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
++V EY+ +GSL R G V LG + + V A+ YL +
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLEGN- 121
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYTM 780
+ +HRD++++NVL+ + A VSDFG+ K ++ T+ G + APE
Sbjct: 122 --NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREK 174
Query: 781 RATEKYDVYSFGVLVFEV 798
+ + K DV+SFG+L++E+
Sbjct: 175 KFSTKSDVWSFGILLWEI 192
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 31/239 (12%)
Query: 607 IGKGGQGSVY--KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+G G G V + +LPS ++V + + +FL E + + H N ++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGD---DVTAKELGWNRRINVIKGVANALSYLHHD 721
G +V EY++ GSL L T +L + +++G+A+ + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSD- 165
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIA 777
+HRD++++N+L++SN VSDFG+A+ + P ++ +T G + +PE
Sbjct: 166 --MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA-YTTRGGKIPIRWTSPEAI 222
Query: 778 YTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKILDP--RLPTP 833
+ T DV+S+G++++EV+ G P DV K +D RLP P
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYRLPPP 272
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IGKG G V + G+ VAVK N A FL E + ++RH N V+ G
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIK------NDATAQAFLAEASVMTQLRHSNLVQLLG 81
Query: 667 FCYNGPHS-FLVCEYLDRGSLA---RILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
++V EY+ +GSL R G V LG + + V A+ YL +
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLEGN- 136
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYTM 780
+ +HRD++++NVL+ + A VSDFG+ K ++ T+ G + APE
Sbjct: 137 --NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREK 189
Query: 781 RATEKYDVYSFGVLVFEV 798
+ + K DV+SFG+L++E+
Sbjct: 190 KFSTKSDVWSFGILLWEI 207
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ A VAVK G+M+ + FL E +K ++H VK H
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKP----GSMS-VEAFLAEANVMKTLQHDKLVKLHA 77
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ E++ +GSL L D +K+ + I+ +A ++++ +
Sbjct: 78 VVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQR---NY 132
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + N+L+ ++ ++DFG+A+ + + E A + APE T K
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 193 SDVWSFGILLMEIV 206
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ A VAVK + G+M+ + FL E +K ++H VK H
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVK----TMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHA 250
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ E++ +GSL L D +K+ + I+ +A ++++ +
Sbjct: 251 VVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQR---NY 305
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + N+L+ ++ ++DFG+A+ + + E A + APE T K
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 366 SDVWSFGILLMEIV 379
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 39/219 (17%)
Query: 606 CIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
C+GKG G V++ G+ VAVK F+S+ + E N V+ +RH N + F
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRD-EKSWFRETELYNTVM----LRHENILGFI 68
Query: 666 GFCYNGPHS----FLVCEYLDRGSLARILG----DDVTAKELGWNRRINVIKGVANALSY 717
HS +L+ Y + GSL L D V+ + ++ +A+ L++
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC--------LRIVLSIASGLAH 120
Query: 718 LHHDCL-----PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
LH + P+I HRD+ SKN+L+ N + ++D G+A + S+N + G
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVG 179
Query: 768 TFGYAAPEI------AYTMRATEKYDVYSFGVLVFEVIK 800
T Y APE+ + ++ D+++FG++++EV +
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 218
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 39/219 (17%)
Query: 606 CIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
C+GKG G V++ G+ VAVK F+S+ + E N V+ +RH N + F
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRD-EKSWFRETELYNTVM----LRHENILGFI 68
Query: 666 GFCYNGPHS----FLVCEYLDRGSLARILG----DDVTAKELGWNRRINVIKGVANALSY 717
HS +L+ Y + GSL L D V+ + ++ +A+ L++
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC--------LRIVLSIASGLAH 120
Query: 718 LHHDCL-----PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
LH + P+I HRD+ SKN+L+ N + ++D G+A + S+N + G
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVG 179
Query: 768 TFGYAAPEI------AYTMRATEKYDVYSFGVLVFEVIK 800
T Y APE+ + ++ D+++FG++++EV +
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 218
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IGKG G V + G+ VAVK N A FL E + ++RH N V+ G
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIK------NDATAQAFLAEASVMTQLRHSNLVQLLG 253
Query: 667 FCYNGPHS-FLVCEYLDRGSLA---RILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
++V EY+ +GSL R G V LG + + V A+ YL +
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLEGN- 308
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYTM 780
+ +HRD++++NVL+ + A VSDFG+ K ++ T+ G + APE
Sbjct: 309 --NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREK 361
Query: 781 RATEKYDVYSFGVLVFEV 798
+ + K DV+SFG+L++E+
Sbjct: 362 KFSTKSDVWSFGILLWEI 379
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 95
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 150
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ F H+ + +
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLP--VKWM 205
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 638 GNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAK 697
G+M++ DEF+ E + + H V+ +G C F++ EY+ G L L +
Sbjct: 44 GSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRH 100
Query: 698 ELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757
+ + + K V A+ YL +HRD++++N L++ VSDFG++++V
Sbjct: 101 RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-- 155
Query: 758 HSSNWTEFAGT---FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+T G+ ++ PE+ + + K D+++FGVL++E+
Sbjct: 156 LDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 39/219 (17%)
Query: 606 CIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
C+GKG G V++ G+ VAVK F+S+ + E N V+ +RH N + F
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIFSSRD-EKSWFRETELYNTVM----LRHENILGFI 97
Query: 666 GFCYNGPHS----FLVCEYLDRGSLARILG----DDVTAKELGWNRRINVIKGVANALSY 717
HS +L+ Y + GSL L D V+ + ++ +A+ L++
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC--------LRIVLSIASGLAH 149
Query: 718 LHHDCL-----PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
LH + P+I HRD+ SKN+L+ N + ++D G+A + S+N + G
Sbjct: 150 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVG 208
Query: 768 TFGYAAPEI------AYTMRATEKYDVYSFGVLVFEVIK 800
T Y APE+ + ++ D+++FG++++EV +
Sbjct: 209 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 247
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 153
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + +L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 208
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ F H+ + +
Sbjct: 209 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP--VKWM 263
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 606 CIGKGGQGSVYKAELPSG----DIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNN 661
+G+G G V+ + SG + A+K L + D E L E+ H
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL--KVRDRVRTKMERDILVEVNHPFI 88
Query: 662 VKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHD 721
VK H +L+ ++L G L L +V E + +A AL +LH
Sbjct: 89 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK---FYLAELALALDHLHS- 144
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMR 781
II+RD+ +N+LLD ++DFG++K H F GT Y APE+
Sbjct: 145 --LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 782 ATEKYDVYSFGVLVFEVIKGNHP 804
T+ D +SFGVL+FE++ G P
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 70.1 bits (170), Expect = 5e-12, Method: Composition-based stats.
Identities = 52/194 (26%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ VAVK L G+M+ D FL E +K+++H+ V+ +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA 71
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
P +++ EY++ GSL L K L N+ +++ +A ++++ +
Sbjct: 72 VVTQEP-IYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEER---NY 126
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHR++ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L+ E++
Sbjct: 187 SDVWSFGILLTEIV 200
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 606 CIGKGGQGSVYKAELPSG----DIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNN 661
+G+G G V+ + SG + A+K L + D E L E+ H
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL--KVRDRVRTKMERDILVEVNHPFI 89
Query: 662 VKFHGFCYNGPHSFLVCEYLDRGSLARILGDDV--TAKELGWNRRINVIKGVANALSYLH 719
VK H +L+ ++L G L L +V T +++ + + +A AL +LH
Sbjct: 90 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALALDHLH 144
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT 779
II+RD+ +N+LLD ++DFG++K H F GT Y APE+
Sbjct: 145 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 780 MRATEKYDVYSFGVLVFEVIKGNHP 804
T+ D +SFGVL+FE++ G P
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 31/239 (12%)
Query: 607 IGKGGQGSVY--KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+G G G V + +LPS ++V + + +FL E + + H N ++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGD---DVTAKELGWNRRINVIKGVANALSYLHHD 721
G +V EY++ GSL L T +L + +++G+A+ + YL
Sbjct: 83 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSD- 136
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIA 777
+HRD++++N+L++SN VSDFG+++ + P ++ +T G + +PE
Sbjct: 137 --MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAI 193
Query: 778 YTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKILDP--RLPTP 833
+ T DV+S+G++++EV+ G P DV K +D RLP P
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYRLPPP 243
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 95
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 150
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ F H+ + +
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP--VKWM 205
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIV----AVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNN 661
+G G G+VYK +P G+ V A+K N +G A+ EF++E L + + H +
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNET--TGPKANV-EFMDEALIMASMDHPHL 102
Query: 662 VKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHD 721
V+ G C + P LV + + G L + + +G +N +A + YL
Sbjct: 103 VRLLGVCLS-PTIQLVTQLMPHGCLLEYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEER 159
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYT 779
++HRD++++NVL+ S ++DFG+A+ + + G + A E +
Sbjct: 160 ---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 216
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHPRD 806
+ T + DV+S+GV ++E++ G P D
Sbjct: 217 RKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 31/239 (12%)
Query: 607 IGKGGQGSVY--KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+G G G V + +LPS ++V + + +FL E + + H N ++
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 99
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGD---DVTAKELGWNRRINVIKGVANALSYLHHD 721
G +V EY++ GSL L T +L + +++G+A+ + YL
Sbjct: 100 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSD- 153
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIA 777
+HRD++++N+L++SN VSDFG+++ + P ++ +T G + +PE
Sbjct: 154 --MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAI 210
Query: 778 YTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKILDP--RLPTP 833
+ T DV+S+G++++EV+ G P DV K +D RLP P
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYRLPPP 260
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 99
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + +L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 154
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ F H+ + +
Sbjct: 155 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP--VKWM 209
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 92
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + +L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 147
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ F H+ + +
Sbjct: 148 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP--VKWM 202
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 94
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 149
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ F H+ + +
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP--VKWM 204
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G VY L D AVK N G ++ +FL E + +K+ H N +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS---QFLTEGIIMKDFSHPNVL 94
Query: 663 KFHGFCYNGPHS-FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYL 718
G C S +V Y+ G L + ++ T K+L I VA + +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 149
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK------FVGPHSSNWTEFAGTFGYA 772
+HRD++++N +LD F V+DFG+A+ F H+ + +
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP--VKWM 204
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
A E T + T K DV+SFGVL++E++ P
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 31/239 (12%)
Query: 607 IGKGGQGSVY--KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+G G G V + +LPS ++V + + +FL E + + H N ++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGD---DVTAKELGWNRRINVIKGVANALSYLHHD 721
G +V EY++ GSL L T +L + +++G+A+ + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSD- 165
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIA 777
+HRD++++N+L++SN VSDFG+++ + P ++ +T G + +PE
Sbjct: 166 --MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAI 222
Query: 778 YTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKILDP--RLPTP 833
+ T DV+S+G++++EV+ G P DV K +D RLP P
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYRLPPP 272
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IGKG G V+K + + +VA+K + L + ++ E+ L + K++
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
G +++ EYL GS +L L + +++ + L YLH +
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---K 144
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEK 785
IHRDI + NVLL + E ++DFG+A + F GT + APE+ K
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 204
Query: 786 YDVYSFGVLVFEVIKGNHP 804
D++S G+ E+ +G P
Sbjct: 205 ADIWSLGITAIELARGEPP 223
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ + VAVK L G M+ FL E +K ++H V+ +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVK----TLKPGTMSVQ-AFLEEANLMKTLQHDKLVRLYA 75
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+++ EY+ +GSL L D K L + I+ +A ++Y+ +
Sbjct: 76 VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERK---NY 131
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + NVL+ + ++DFG+A+ + + E A + APE T K
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 786 YDVYSFGVLVFEVI 799
DV+SFG+L++E++
Sbjct: 192 SDVWSFGILLYEIV 205
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 606 CIGKGGQGSVYKAELPSG----DIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNN 661
+G+G G V+ + SG + A+K L + D E L E+ H
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL--KVRDRVRTKMERDILVEVNHPFI 88
Query: 662 VKFHGFCYNGPHSFLVCEYLDRGSLARILGDDV--TAKELGWNRRINVIKGVANALSYLH 719
VK H +L+ ++L G L L +V T +++ + + +A AL +LH
Sbjct: 89 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALALDHLH 143
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT 779
II+RD+ +N+LLD ++DFG++K H F GT Y APE+
Sbjct: 144 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 780 MRATEKYDVYSFGVLVFEVIKGNHP 804
T+ D +SFGVL+FE++ G P
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 37/212 (17%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK------GVA 712
VK+ G CY+ L+ EYL GSL L RI+ IK +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQIC 124
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
+ YL IHRD++++N+L+++ + DFG+ K V P + + +
Sbjct: 125 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEFFKVKEPGESP 180
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
F Y APE + + DV+SFGV+++E+
Sbjct: 181 IFWY-APESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 37/212 (17%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK------GVA 712
VK+ G CY+ L+ EYL GSL L RI+ IK +
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQIC 142
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
+ YL IHRD++++N+L+++ + DFG+ K V P + +
Sbjct: 143 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESP 198
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
F Y APE + + DV+SFGV+++E+
Sbjct: 199 IFWY-APESLTESKFSVASDVWSFGVVLYELF 229
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 31/239 (12%)
Query: 607 IGKGGQGSVY--KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+G G G V + +LPS ++V + + +FL E + + H N ++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGD---DVTAKELGWNRRINVIKGVANALSYLHHD 721
G +V EY++ GSL L T +L + +++G+A+ + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSD- 165
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIA 777
+HRD++++N+L++SN VSDFG+++ + P ++ +T G + +PE
Sbjct: 166 --MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAI 222
Query: 778 YTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKILDP--RLPTP 833
+ T DV+S+G++++EV+ G P DV K +D RLP P
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYRLPPP 272
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 31/239 (12%)
Query: 607 IGKGGQGSVY--KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+G G G V + +LPS ++V + + +FL E + + H N ++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGD---DVTAKELGWNRRINVIKGVANALSYLHHD 721
G +V EY++ GSL L T +L + +++G+A+ + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSD- 165
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIA 777
+HRD++++N+L++SN VSDFG+++ + P ++ +T G + +PE
Sbjct: 166 --MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAI 222
Query: 778 YTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKILDP--RLPTP 833
+ T DV+S+G++++EV+ G P DV K +D RLP P
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYRLPPP 272
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 37/212 (17%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK------GVA 712
VK+ G CY+ L+ EYL GSL L RI+ IK +
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQIC 123
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
+ YL IHRD++++N+L+++ + DFG+ K V P + +
Sbjct: 124 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESP 179
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
F Y APE + + DV+SFGV+++E+
Sbjct: 180 IFWY-APESLTESKFSVASDVWSFGVVLYELF 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 37/212 (17%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK------GVA 712
VK+ G CY+ L+ EYL GSL L RI+ IK +
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQIC 122
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
+ YL IHRD++++N+L+++ + DFG+ K V P + +
Sbjct: 123 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESP 178
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
F Y APE + + DV+SFGV+++E+
Sbjct: 179 IFWY-APESLTESKFSVASDVWSFGVVLYELF 209
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 31/239 (12%)
Query: 607 IGKGGQGSVY--KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+G G G V + +LPS ++V + + +FL E + + H N ++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGD---DVTAKELGWNRRINVIKGVANALSYLHHD 721
G +V EY++ GSL L T +L + +++G+A+ + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSD- 165
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIA 777
+HRD++++N+L++SN VSDFG+++ + P ++ +T G + +PE
Sbjct: 166 --MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAI 222
Query: 778 YTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKILDP--RLPTP 833
+ T DV+S+G++++EV+ G P DV K +D RLP P
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYRLPPP 272
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 37/212 (17%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK------GVA 712
VK+ G CY+ L+ EYL GSL L RI+ IK +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQIC 124
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
+ YL IHRD++++N+L+++ + DFG+ K V P + +
Sbjct: 125 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESP 180
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
F Y APE + + DV+SFGV+++E+
Sbjct: 181 IFWY-APESLTESKFSVASDVWSFGVVLYELF 211
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 31/239 (12%)
Query: 607 IGKGGQGSVY--KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+G G G V + +LPS ++V + + +FL E + + H N ++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGD---DVTAKELGWNRRINVIKGVANALSYLHHD 721
G +V EY++ GSL L T +L + +++G+A+ + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSD- 165
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIA 777
+HRD++++N+L++SN VSDFG+++ + P ++ +T G + +PE
Sbjct: 166 --MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAI 222
Query: 778 YTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKILDP--RLPTP 833
+ T DV+S+G++++EV+ G P DV K +D RLP P
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYRLPPP 272
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 37/212 (17%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK------GVA 712
VK+ G CY+ L+ EYL GSL L RI+ IK +
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQIC 128
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
+ YL IHRD++++N+L+++ + DFG+ K V P + +
Sbjct: 129 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESP 184
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
F Y APE + + DV+SFGV+++E+
Sbjct: 185 IFWY-APESLTESKFSVASDVWSFGVVLYELF 215
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IGKG G V+K + + +VA+K + L + ++ E+ L + K++
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
G +++ EYL GS +L L + +++ + L YLH +
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---K 139
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEK 785
IHRDI + NVLL + E ++DFG+A + F GT + APE+ K
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 199
Query: 786 YDVYSFGVLVFEVIKGNHP 804
D++S G+ E+ +G P
Sbjct: 200 ADIWSLGITAIELARGEPP 218
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 31/239 (12%)
Query: 607 IGKGGQGSVY--KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+G G G V + +LPS ++V + + +FL E + + H N ++
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 109
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGD---DVTAKELGWNRRINVIKGVANALSYLHHD 721
G +V EY++ GSL L T +L + +++G+A+ + YL
Sbjct: 110 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSD- 163
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIA 777
+HRD++++N+L++SN VSDFG+++ + P ++ +T G + +PE
Sbjct: 164 --MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAI 220
Query: 778 YTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKILDP--RLPTP 833
+ T DV+S+G++++EV+ G P DV K +D RLP P
Sbjct: 221 AYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYRLPPP 270
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 37/212 (17%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK------GVA 712
VK+ G CY+ L+ EYL GSL L RI+ IK +
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQIC 155
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
+ YL IHRD++++N+L+++ + DFG+ K V P + +
Sbjct: 156 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESP 211
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
F Y APE + + DV+SFGV+++E+
Sbjct: 212 IFWY-APESLTESKFSVASDVWSFGVVLYELF 242
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 69.3 bits (168), Expect = 8e-12, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 95/198 (47%), Gaps = 25/198 (12%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IGKG G V + G+ VAVK N A FL E + ++RH N V+ G
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIK------NDATAQAFLAEASVMTQLRHSNLVQLLG 72
Query: 667 FCYNGPHS-FLVCEYLDRGSLA---RILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
++V EY+ +GSL R G V LG + + V A+ YL +
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLEGN- 127
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYTM 780
+ +HRD++++NVL+ + A VSDFG+ K ++ T+ G + APE
Sbjct: 128 --NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREA 180
Query: 781 RATEKYDVYSFGVLVFEV 798
+ K DV+SFG+L++E+
Sbjct: 181 AFSTKSDVWSFGILLWEI 198
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIV----AVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNN 661
+G G G+VYK +P G+ V A+K N +G A+ EF++E L + + H +
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNET--TGPKANV-EFMDEALIMASMDHPHL 79
Query: 662 VKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHD 721
V+ G C + P LV + + G L + + +G +N +A + YL
Sbjct: 80 VRLLGVCLS-PTIQLVTQLMPHGCLLEYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEER 136
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYT 779
++HRD++++NVL+ S ++DFG+A+ + + G + A E +
Sbjct: 137 ---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 193
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHPRD 806
+ T + DV+S+GV ++E++ G P D
Sbjct: 194 RKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D +D + +G G V AE + +VA+K + L G + NE+ L +I+
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME---NEIAVLHKIK 74
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKGVANALS 716
H N V +G H +L+ + + G L D + K R + +I V +A+
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELF----DRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 717 YLHHDCLPSIIHRDISSKNVL---LDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH I+HRD+ +N+L LD + + +SDFG++K P S T GT GY A
Sbjct: 131 YLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVA 186
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE+ ++ D +S GV+ + ++ G P
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 37/212 (17%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK------GVA 712
VK+ G CY+ L+ EYL GSL L RI+ IK +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQIC 124
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
+ YL IHRD++++N+L+++ + DFG+ K V P + +
Sbjct: 125 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESP 180
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
F Y APE + + DV+SFGV+++E+
Sbjct: 181 IFWY-APESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 37/212 (17%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK------GVA 712
VK+ G CY+ L+ EYL GSL L RI+ IK +
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQIC 142
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
+ YL IHRD++++N+L+++ + DFG+ K V P + +
Sbjct: 143 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESP 198
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
F Y APE + + DV+SFGV+++E+
Sbjct: 199 IFWY-APESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IGKG G V+K + + +VA+K + L + ++ E+ L + K++
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
G +++ EYL GS +L L + +++ + L YLH +
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---K 124
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEK 785
IHRDI + NVLL + E ++DFG+A + F GT + APE+ K
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 786 YDVYSFGVLVFEVIKGNHP 804
D++S G+ E+ +G P
Sbjct: 185 ADIWSLGITAIELARGEPP 203
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 37/212 (17%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK------GVA 712
VK+ G CY+ L+ EYL GSL L RI+ IK +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQIC 127
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
+ YL IHRD++++N+L+++ + DFG+ K V P + +
Sbjct: 128 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESP 183
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
F Y APE + + DV+SFGV+++E+
Sbjct: 184 IFWY-APESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 607 IGKGGQGSVYKAELPSGD-IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG+G G V+ L + + +VAVK L A +FL E LK+ H N V+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA---KFLQEARILKQYSHPNIVRLI 178
Query: 666 GFCYNGPHSFLVCEYLDRG---SLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
G C ++V E + G + R G + K L + ++ A + YL C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL-----LQMVGDAAAGMEYLESKC 233
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWTEFAGTFGYAAPEIAYTM 780
IHRD++++N L+ +SDFG+++ G ++++ + APE
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYG 290
Query: 781 RATEKYDVYSFGVLVFEV 798
R + + DV+SFG+L++E
Sbjct: 291 RYSSESDVWSFGILLWET 308
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IGKG G V+K + + +VA+K + L + ++ E+ L + K++
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
G +++ EYL GS +L L + +++ + L YLH +
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---K 124
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEK 785
IHRDI + NVLL + E ++DFG+A + F GT + APE+ K
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 184
Query: 786 YDVYSFGVLVFEVIKGNHP 804
D++S G+ E+ +G P
Sbjct: 185 ADIWSLGITAIELARGEPP 203
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 37/212 (17%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK------GVA 712
VK+ G CY+ L+ EYL GSL L RI+ IK +
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQIC 130
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
+ YL IHRD++++N+L+++ + DFG+ K V P + +
Sbjct: 131 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESP 186
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
F Y APE + + DV+SFGV+++E+
Sbjct: 187 IFWY-APESLTESKFSVASDVWSFGVVLYELF 217
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 31/239 (12%)
Query: 607 IGKGGQGSVY--KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+G G G V + +LPS ++V + + +FL E + + H N ++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGD---DVTAKELGWNRRINVIKGVANALSYLHHD 721
G +V EY++ GSL L T +L + +++G+A+ + YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSD- 165
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIA 777
+HRD++++N+L++SN VSDFG+ + + P ++ +T G + +PE
Sbjct: 166 --MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA-YTTRGGKIPIRWTSPEAI 222
Query: 778 YTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKILDP--RLPTP 833
+ T DV+S+G++++EV+ G P DV K +D RLP P
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYRLPPP 272
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 37/212 (17%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK------GVA 712
VK+ G CY+ L+ EYL GSL L RI+ IK +
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQIC 129
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
+ YL IHRD++++N+L+++ + DFG+ K V P + +
Sbjct: 130 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESP 185
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
F Y APE + + DV+SFGV+++E+
Sbjct: 186 IFWY-APESLTESKFSVASDVWSFGVVLYELF 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 37/212 (17%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK------GVA 712
VK+ G CY+ L+ EYL GSL L RI+ IK +
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQIC 131
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
+ YL IHRD++++N+L+++ + DFG+ K V P + +
Sbjct: 132 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESP 187
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
F Y APE + + DV+SFGV+++E+
Sbjct: 188 IFWY-APESLTESKFSVASDVWSFGVVLYELF 218
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 607 IGKGGQGSVYKAE-LPSGDIVAVKKF---NSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
+G+G G V K +G IVA+KKF + + +A + E+ LK++RH N V
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA-----MREIKLLKQLRHENLV 87
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRI--NVIKGVANALSYLHH 720
C +LV E++D L DD+ G + ++ + + N + + H
Sbjct: 88 NLLEVCKKKKRWYLVFEFVDHTIL-----DDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142
Query: 721 DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY-T 779
+IIHRDI +N+L+ + + DFG A+ + + + T Y APE+
Sbjct: 143 H---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD 199
Query: 780 MRATEKYDVYSFGVLVFEVIKGN 802
++ + DV++ G LV E+ G
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 24/196 (12%)
Query: 617 KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676
K ELP VA+K D FL E + + H N + G +
Sbjct: 48 KRELP----VAIKTLKVGYTEKQRRD---FLGEASIMGQFDHPNIIHLEGVVTKSKPVMI 100
Query: 677 VCEYLDRGSLARILGDD---VTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISS 733
V EY++ GSL L + T +L + +++G++ + YL +HRD+++
Sbjct: 101 VTEYMENGSLDTFLKKNDGQFTVIQL-----VGMLRGISAGMKYLSD---MGYVHRDLAA 152
Query: 734 KNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIAYTMRATEKYDVY 789
+N+L++SN VSDFG+++ + P ++ +T G + APE + T DV+
Sbjct: 153 RNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIAFRKFTSASDVW 211
Query: 790 SFGVLVFEVIK-GNHP 804
S+G++++EV+ G P
Sbjct: 212 SYGIVMWEVVSYGERP 227
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 598 TDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKK---FNSQLLSGNMADHDEFLNEVLAL 653
+ DF K +G+G G V A P+G+IVA+KK F+ L + L E+ L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT------LREIKIL 63
Query: 654 KEIRHRNNVKFHGFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV 707
K +H N + F P SF + + L + L R+ ++ + L +
Sbjct: 64 KHFKHENIITI--FNIQRPDSFENFNEVYIIQELMQTDLHRV----ISTQMLSDDHIQYF 117
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---------- 757
I A+ LH ++IHRD+ N+L++SN + V DFG+A+ +
Sbjct: 118 IYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 758 HSSNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEV 798
S TE+ T Y APE+ T + + DV+S G ++ E+
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 20/187 (10%)
Query: 626 VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGS 685
VA+K + D FL+E + + H N + G ++ EY++ GS
Sbjct: 39 VAIKTLKAGYTDKQRRD---FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 95
Query: 686 LARILGDD---VTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF 742
L L + T +L + +++G+ + + YL S +HRD++++N+L++SN
Sbjct: 96 LDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYLSD---MSYVHRDLAARNILVNSNL 147
Query: 743 EAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
VSDFG+++ + P ++ +T G + APE + T DV+S+G++++EV
Sbjct: 148 VCKVSDFGMSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 206
Query: 799 IK-GNHP 804
+ G P
Sbjct: 207 MSYGERP 213
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 37/212 (17%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK------GVA 712
VK+ G CY+ L+ EYL GSL L RI+ IK +
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--------KERIDHIKLLQYTSQIC 125
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
+ YL IHR+++++N+L+++ + DFG+ K V P + + +
Sbjct: 126 KGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTK-VLPQDKEYYKVKEPGESP 181
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
F Y APE + + DV+SFGV+++E+
Sbjct: 182 IFWY-APESLTESKFSVASDVWSFGVVLYELF 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 10/201 (4%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G+ + + +L +G VAVK N Q + ++ + E+ LK RH + +K +
Sbjct: 21 VGTFGKVKIGEHQL-TGHKVAVKILNRQKIR-SLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
F+V EY+ G L + +E+ R + + + +A+ Y H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR---LFQQILSAVDYCHRHM---V 132
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE-IAYTMRATEK 785
+HRD+ +NVLLD++ A ++DFG++ + T G+ YAAPE I+ + A +
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS-CGSPNYAAPEVISGRLYAGPE 191
Query: 786 YDVYSFGVLVFEVIKGNHPRD 806
D++S GV+++ ++ G P D
Sbjct: 192 VDIWSCGVILYALLCGTLPFD 212
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 20/187 (10%)
Query: 626 VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGS 685
VA+K + D FL+E + + H N + G ++ EY++ GS
Sbjct: 45 VAIKTLKAGYTDKQRRD---FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 101
Query: 686 LARILGDD---VTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF 742
L L + T +L + +++G+ + + YL S +HRD++++N+L++SN
Sbjct: 102 LDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYLSD---MSYVHRDLAARNILVNSNL 153
Query: 743 EAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
VSDFG+++ + P ++ +T G + APE + T DV+S+G++++EV
Sbjct: 154 VCKVSDFGMSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 212
Query: 799 IK-GNHP 804
+ G P
Sbjct: 213 MSYGERP 219
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 20/187 (10%)
Query: 626 VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGS 685
VA+K + D FL+E + + H N + G ++ EY++ GS
Sbjct: 60 VAIKTLKAGYTDKQRRD---FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 116
Query: 686 LARILGDD---VTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF 742
L L + T +L + +++G+ + + YL S +HRD++++N+L++SN
Sbjct: 117 LDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNL 168
Query: 743 EAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
VSDFG+++ + P ++ +T G + APE + T DV+S+G++++EV
Sbjct: 169 VCKVSDFGMSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 227
Query: 799 IK-GNHP 804
+ G P
Sbjct: 228 MSYGERP 234
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D +D + +G G V AE + +VA+K + L G + NE+ L +I+
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME---NEIAVLHKIK 74
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKGVANALS 716
H N V +G H +L+ + + G L D + K R + +I V +A+
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELF----DRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 717 YLHHDCLPSIIHRDISSKNVL---LDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH I+HRD+ +N+L LD + + +SDFG++K P S T GT GY A
Sbjct: 131 YLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVA 186
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE+ ++ D +S GV+ + ++ G P
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 101/201 (50%), Gaps = 10/201 (4%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G+ + + +L +G VAVK N Q + ++ + E+ LK RH + +K +
Sbjct: 21 VGTFGKVKIGEHQL-TGHKVAVKILNRQKIR-SLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
F+V EY+ G L + +E+ R + + + +A+ Y H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR---LFQQILSAVDYCHRHM---V 132
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE-IAYTMRATEK 785
+HRD+ +NVLLD++ A ++DFG++ + + G+ YAAPE I+ + A +
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGSPNYAAPEVISGRLYAGPE 191
Query: 786 YDVYSFGVLVFEVIKGNHPRD 806
D++S GV+++ ++ G P D
Sbjct: 192 VDIWSCGVILYALLCGTLPFD 212
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D +D + +G G V AE + +VA+K + L G + NE+ L +I+
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME---NEIAVLHKIK 74
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKGVANALS 716
H N V +G H +L+ + + G L D + K R + +I V +A+
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELF----DRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 717 YLHHDCLPSIIHRDISSKNVL---LDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH I+HRD+ +N+L LD + + +SDFG++K P S T GT GY A
Sbjct: 131 YLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVA 186
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE+ ++ D +S GV+ + ++ G P
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 37/212 (17%)
Query: 607 IGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADH-DEFLNEVLALKEIRHRN 660
+GKG GSV +G++VAVKK L + +H +F E+ LK ++H N
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKK-----LQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 661 NVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK------GVA 712
VK+ G CY+ L+ E+L GSL L RI+ IK +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKH--------KERIDHIKLLQYTSQIC 127
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AG 767
+ YL IHRD++++N+L+++ + DFG+ K V P + +
Sbjct: 128 KGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESP 183
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
F Y APE + + DV+SFGV+++E+
Sbjct: 184 IFWY-APESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 15/214 (7%)
Query: 596 KATDDFDEKFCIGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALK 654
K +D++D K +GKG V + +G A K N++ LS D + E +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR--DFQKLEREARICR 60
Query: 655 EIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKEL-GWNRRINVIKGVAN 713
+++H N V+ H +LV + + G L +D+ A+E + I+ +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILE 116
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEA---HVSDFGIAKFVGPHSSNWTEFAGTFG 770
+++Y H + I+HR++ +N+LL S + ++DFG+A V S W FAGT G
Sbjct: 117 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPG 172
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y +PE+ ++ D+++ GV+++ ++ G P
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 15/214 (7%)
Query: 596 KATDDFDEKFCIGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALK 654
K +D++D K +GKG V + +G A K N++ LS D + E +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR--DFQKLEREARICR 59
Query: 655 EIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKEL-GWNRRINVIKGVAN 713
+++H N V+ H +LV + + G L +D+ A+E + I+ +
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILE 115
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEA---HVSDFGIAKFVGPHSSNWTEFAGTFG 770
+++Y H + I+HR++ +N+LL S + ++DFG+A V S W FAGT G
Sbjct: 116 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPG 171
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y +PE+ ++ D+++ GV+++ ++ G P
Sbjct: 172 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG GG V A + +G++VA+K + L ++ E+ ALK +RH++ + +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLP---RIKTEIEALKNLRHQHICQLY 74
Query: 666 GFCYNGPHSFLVCEYLDRGSL-ARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
F+V EY G L I+ D ++E R+ V + + +A++Y+H
Sbjct: 75 HVLETANKIFMVLEYCPGGELFDYIISQDRLSEE---ETRV-VFRQIVSAVAYVHSQ--- 127
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGI-AKFVGPHSSNWTEFAGTFGYAAPE-IAYTMRA 782
HRD+ +N+L D + + DFG+ AK G + G+ YAAPE I
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYL 187
Query: 783 TEKYDVYSFGVLVFEVIKGNHPRD 806
+ DV+S G+L++ ++ G P D
Sbjct: 188 GSEADVWSMGILLYVLMCGFLPFD 211
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D +D + +G G V AE + +VA+K + L G + NE+ L +I+
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME---NEIAVLHKIK 74
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKGVANALS 716
H N V +G H +L+ + + G L D + K R + +I V +A+
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELF----DRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 717 YLHHDCLPSIIHRDISSKNVL---LDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH I+HRD+ +N+L LD + + +SDFG++K P S T GT GY A
Sbjct: 131 YLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVA 186
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE+ ++ D +S GV+ + ++ G P
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 648 NEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINV 707
+E L L + H ++ G + F++ +Y++ G L +L R N
Sbjct: 55 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--------QRFPNP 106
Query: 708 IKG-----VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNW 762
+ V AL YLH II+RD+ +N+LLD N ++DFG AK+V P +
Sbjct: 107 VAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVT-- 160
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
GT Y APE+ T + D +SFG+L++E++ G P
Sbjct: 161 YXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 36/222 (16%)
Query: 598 TDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKK---FNSQLLSGNMADHDEFLNEVLAL 653
+ DF K +G+G G V A P+G+IVA+KK F+ L + L E+ L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT------LREIKIL 63
Query: 654 KEIRHRNNVKFHGFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV 707
K +H N + F P SF + + L + L R+ ++ + L +
Sbjct: 64 KHFKHENIITI--FNIQRPDSFENFNEVYIIQELMQTDLHRV----ISTQMLSDDHIQYF 117
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---------- 757
I A+ LH ++IHRD+ N+L++SN + V DFG+A+ +
Sbjct: 118 IYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 758 HSSNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEV 798
S EF T Y APE+ T + + DV+S G ++ E+
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 17/198 (8%)
Query: 607 IGKGGQGSVYKAELPSGD-IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG+G G V+ L + + +VAVK L A +FL E LK+ H N V+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA---KFLQEARILKQYSHPNIVRLI 178
Query: 666 GFCYNGPHSFLVCEYLDRG---SLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
G C ++V E + G + R G + K L + ++ A + YL C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL-----LQMVGDAAAGMEYLESKC 233
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWTEFAGTFGYAAPEIAYTM 780
IHRD++++N L+ +SDFG+++ G +++ + APE
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 781 RATEKYDVYSFGVLVFEV 798
R + + DV+SFG+L++E
Sbjct: 291 RYSSESDVWSFGILLWET 308
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 598 TDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI 656
TD++ IGKG V + +L +G A K N++ LS DH + E + +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSAR--DHQKLEREARICRLL 60
Query: 657 RHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALS 716
+H N V+ H +LV + + G L +D+ A+E + + + L
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELF----EDIVARE--YYSEADASHCIQQILE 114
Query: 717 YLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
+ H ++HRD+ +N+LL S + ++DFG+A V W FAGT GY +
Sbjct: 115 AVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE+ + D+++ GV+++ ++ G P
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 606 CIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
C+GKG G V++ L G+ VAVK F+S+ + E N VL +RH N + F
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE-TEIYNTVL----LRHDNILGFI 68
Query: 666 GFCYNGPHS----FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHD 721
+S +L+ Y + GSL L L + + A L++LH +
Sbjct: 69 ASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVE 124
Query: 722 CL-----PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AGTFGY 771
P+I HRD S+NVL+ SN + ++D G+A + S++ + GT Y
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRY 183
Query: 772 AAPEIAYTMRATEKY------DVYSFGVLVFEVIK 800
APE+ T+ + D+++FG++++E+ +
Sbjct: 184 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIAR 218
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 31/211 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVK------KFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G GG +VY AE +I VA+K + + L F EV ++ H+
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLK-------RFEREVHNSSQLSHQ 71
Query: 660 N-----NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANA 714
N +V CY +LV EY++ +L+ + + L + IN + +
Sbjct: 72 NIVSMIDVDEEDDCY-----YLVMEYIEGPTLSEYIE---SHGPLSVDTAINFTNQILDG 123
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFA-GTFGYAA 773
+ + H I+HRDI +N+L+DSN + DFGIAK + S T GT Y +
Sbjct: 124 IKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFS 180
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE A E D+YS G++++E++ G P
Sbjct: 181 PEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 606 CIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
IGKG V A + +G VAV+ + L N + + EV +K + H N VK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQL--NSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
+LV EY G + L KE + + + +A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF-- 133
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIA-KFVGPHSSNWTEFAGTFGYAAPEIAYTMRAT 783
I+HRD+ ++N+LLD++ ++DFG + +F + EF G+ YAAPE+ +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDEFCGSPPYAAPELFQGKKYD 190
Query: 784 -EKYDVYSFGVLVFEVIKGNHPRD 806
+ DV+S GV+++ ++ G+ P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 607 IGKGGQGSVYKAELPSGD--------IVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK +++D ++E+ +K I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG-------------DDVTAKELGWNRR 704
H+N + G C +++ EY +G+L L + V +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--PHSSNW 762
++ +A + YL IHRD++++NVL+ N ++DFG+A+ + + N
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
T + APE + T + DV+SFGVL++E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 15/217 (6%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVL 651
+I +DF+ +GKG G V+ AE + A+K ++ M D E
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL--MDDDVECTMVEK 69
Query: 652 ALKEIRHRNNVKFHGFC--YNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK 709
+ + + H FC + F V EYL+ G L + + + +R
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAA 126
Query: 710 GVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWTEFAG 767
+ L +LH I++RD+ N+LLD + ++DFG+ K +G +N EF G
Sbjct: 127 EIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN--EFCG 181
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
T Y APEI + D +SFGVL++E++ G P
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 34/228 (14%)
Query: 586 DGKIMHEEIIKATDDFDEKFCIGKGGQGSVYKAELP---SGDIVAVKKFNS----QLLSG 638
D + H+ +K D E G G+ S+Y + +G++VAVK QL SG
Sbjct: 2 DPTVFHKRYLKKIRDLGE----GHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSG 57
Query: 639 NMADHDEFLNEVLALKEIRHRNNVKFHGFCYN-GPHSF-LVCEYLDRGSLARILGDDVTA 696
+ E+ L+ + H + VK+ G C + G S LV EY+ GSL D +
Sbjct: 58 -------WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLR----DYLPR 106
Query: 697 KELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756
+G + + + + ++YLH IHR ++++NVLLD++ + DFG+AK V
Sbjct: 107 HCVGLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV- 162
Query: 757 PHSSNWTEF-----AGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
P + + F Y APE + DV+SFGV ++E++
Sbjct: 163 PEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELL 209
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 586 DGKIMHEEIIKATDDFDEKFCIGKGGQGSVYKAELP---SGDIVAVKKFNSQLLSGNMAD 642
D + H+ +K D E G G+ S+Y + +G++VAVK +
Sbjct: 24 DPTVFHKRYLKKIRDLGE----GHFGKVSLYCYDPTNDGTGEMVAVKALKA---DAGPQH 76
Query: 643 HDEFLNEVLALKEIRHRNNVKFHGFCYN-GPHSF-LVCEYLDRGSLARILGDDVTAKELG 700
+ E+ L+ + H + +K+ G C + G S LV EY+ GSL D + +G
Sbjct: 77 RSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR----DYLPRHSIG 132
Query: 701 WNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP-HS 759
+ + + + ++YLH IHRD++++NVLLD++ + DFG+AK V H
Sbjct: 133 LAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189
Query: 760 SNWTEFAG---TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
G F Y APE + DV+SFGV ++E++
Sbjct: 190 XYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 607 IGKGGQGSVY--KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
IG G G V + +LP VAV + + +FL E + + H N V
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVA-IKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGD---DVTAKELGWNRRINVIKGVANALSYLHHD 721
G G +V E+++ G+L L T +L + +++G+A + YL
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQL-----VGMLRGIAAGMRYLAD- 163
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPH-SSNWTEFAGTF--GYAAPEIAY 778
+HRD++++N+L++SN VSDFG+++ + + +T G + APE
Sbjct: 164 --MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 779 TMRATEKYDVYSFGVLVFEVIK-GNHP 804
+ T DV+S+G++++EV+ G P
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 34/228 (14%)
Query: 586 DGKIMHEEIIKATDDFDEKFCIGKGGQGSVYKAELP---SGDIVAVKKFNS----QLLSG 638
D + H+ +K D E G G+ S+Y + +G++VAVK QL SG
Sbjct: 1 DPTVFHKRYLKKIRDLGE----GHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSG 56
Query: 639 NMADHDEFLNEVLALKEIRHRNNVKFHGFCYN-GPHSF-LVCEYLDRGSLARILGDDVTA 696
+ E+ L+ + H + VK+ G C + G S LV EY+ GSL D +
Sbjct: 57 -------WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLR----DYLPR 105
Query: 697 KELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756
+G + + + + ++YLH IHR ++++NVLLD++ + DFG+AK V
Sbjct: 106 HCVGLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV- 161
Query: 757 PHSSNWTEF-----AGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
P + + F Y APE + DV+SFGV ++E++
Sbjct: 162 PEGHEYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELL 208
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 606 CIGKGGQGSVY---KAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNN 661
+G+G G V+ K P SG + A+K L + ++LA ++ H
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILA--DVNHPFV 92
Query: 662 VKFHGFCYNGPHSFLVCEYLDRGSLARILGDDV--TAKELGWNRRINVIKGVANALSYLH 719
VK H +L+ ++L G L L +V T +++ + + +A L +LH
Sbjct: 93 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALGLDHLH 147
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT 779
II+RD+ +N+LLD ++DFG++K H F GT Y APE+
Sbjct: 148 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNR 204
Query: 780 MRATEKYDVYSFGVLVFEVIKGNHP 804
+ D +S+GVL+FE++ G+ P
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 607 IGKGGQGSVYKAELPS------GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
IG+G G V++A P +VAVK + + AD F E + E + N
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD---FQREAALMAEFDNPN 111
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGD------------DVTAKE---------L 699
VK G C G L+ EY+ G L L D++ + L
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 700 GWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS 759
++ + + VA ++YL +HRD++++N L+ N ++DFG+++ + +S
Sbjct: 172 SCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNI--YS 226
Query: 760 SNWTEFAGT----FGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+++ + G + PE + R T + DV+++GV+++E+
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+GKG V + ++ +G A K N++ LS DH + E + ++H N V+ H
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSAR--DHQKLEREARICRLLKHPNIVRLH 87
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
H +L+ + + G L +D+ A+E + + + L + H
Sbjct: 88 DSISEEGHHYLIFDLVTGGELF----EDIVARE--YYSEADASHCIQQILEAVLHCHQMG 141
Query: 726 IIHRDISSKNVLLDSNFE---AHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
++HRD+ +N+LL S + ++DFG+A V W FAGT GY +PE+
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 783 TEKYDVYSFGVLVFEVIKGNHP 804
+ D+++ GV+++ ++ G P
Sbjct: 202 GKPVDLWACGVILYILLVGYPP 223
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 26/224 (11%)
Query: 586 DGKIMHEEIIKATDDFDEKFCIGKGGQGSVYKAELP---SGDIVAVKKFNSQLLSGNMAD 642
D + H+ +K D E G G+ S+Y + +G++VAVK + + +
Sbjct: 7 DPTVFHKRYLKKIRDLGE----GHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSG 62
Query: 643 HDEFLNEVLALKEIRHRNNVKFHGFCYN-GPHSF-LVCEYLDRGSLARILGDDVTAKELG 700
+ E+ L+ + H + +K+ G C + G S LV EY+ GSL D + +G
Sbjct: 63 ---WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLR----DYLPRHSIG 115
Query: 701 WNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSS 760
+ + + + ++YLH IHR+++++NVLLD++ + DFG+AK V P
Sbjct: 116 LAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV-PEGH 171
Query: 761 NWTEF-----AGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ + F Y APE + DV+SFGV ++E++
Sbjct: 172 EYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 36/222 (16%)
Query: 598 TDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKK---FNSQLLSGNMADHDEFLNEVLAL 653
+ DF K +G+G G V A P+G+IVA+KK F+ L + L E+ L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT------LREIKIL 63
Query: 654 KEIRHRNNVKFHGFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV 707
K +H N + F P SF + + L + L R+ ++ + L +
Sbjct: 64 KHFKHENIITI--FNIQRPDSFENFNEVYIIQELMQTDLHRV----ISTQMLSDDHIQYF 117
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---------- 757
I A+ LH ++IHRD+ N+L++SN + V DFG+A+ +
Sbjct: 118 IYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 758 HSSNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEV 798
S TE T Y APE+ T + + DV+S G ++ E+
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 607 IGKGGQGSVYKAE----LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
+GKGG G V++ +G I A+K ++ N D E L+E++H V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
G +L+ EYL G L L + E + + ++ AL +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME---DTACFYLAEISMALGHLHQK- 140
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
II+RD+ +N++L+ ++DFG+ K + F GT Y APEI
Sbjct: 141 --GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 783 TEKYDVYSFGVLVFEVIKGNHP 804
D +S G L+++++ G P
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPP 220
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 31/239 (12%)
Query: 607 IGKGGQGSVY--KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+G G G V + +LPS ++V + + +FL E + + H N ++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGD---DVTAKELGWNRRINVIKGVANALSYLHHD 721
G +V E ++ GSL L T +L + +++G+A+ + YL
Sbjct: 83 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSD- 136
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIA 777
+HRD++++N+L++SN VSDFG+++ + P ++ +T G + +PE
Sbjct: 137 --MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAI 193
Query: 778 YTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKILDP--RLPTP 833
+ T DV+S+G++++EV+ G P DV K +D RLP P
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYRLPPP 243
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 26/224 (11%)
Query: 586 DGKIMHEEIIKATDDFDEKFCIGKGGQGSVYKAELP---SGDIVAVKKFNSQLLSGNMAD 642
D + H+ +K D E G G+ S+Y + +G++VAVK + + +
Sbjct: 7 DPTVFHKRYLKKIRDLGE----GHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSG 62
Query: 643 HDEFLNEVLALKEIRHRNNVKFHGFCYN-GPHSF-LVCEYLDRGSLARILGDDVTAKELG 700
+ E+ L+ + H + +K+ G C + G S LV EY+ GSL D + +G
Sbjct: 63 ---WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLR----DYLPRHSIG 115
Query: 701 WNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSS 760
+ + + + ++YLH IHR+++++NVLLD++ + DFG+AK V P
Sbjct: 116 LAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV-PEGH 171
Query: 761 NWTEF-----AGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ + F Y APE + DV+SFGV ++E++
Sbjct: 172 EYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 13/136 (9%)
Query: 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSK 734
FLV + + +G L L + V E ++++ + A+S+LH + +I+HRD+ +
Sbjct: 176 FLVFDLMRKGELFDYLTEKVALSE---KETRSIMRSLLEAVSFLHAN---NIVHRDLKPE 229
Query: 735 NVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEI-AYTMRAT-----EKYDV 788
N+LLD N + +SDFG + + P E GT GY APEI +M T ++ D+
Sbjct: 230 NILLDDNMQIRLSDFGFSCHLEP-GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDL 288
Query: 789 YSFGVLVFEVIKGNHP 804
++ GV++F ++ G+ P
Sbjct: 289 WACGVILFTLLAGSPP 304
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 607 IGKGGQGSVYKAE----LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
+GKGG G V++ +G I A+K ++ N D E L+E++H V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
G +L+ EYL G L L + E + + ++ AL +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME---DTACFYLAEISMALGHLHQK- 140
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
II+RD+ +N++L+ ++DFG+ K + F GT Y APEI
Sbjct: 141 --GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 783 TEKYDVYSFGVLVFEVIKGNHP 804
D +S G L+++++ G P
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPP 220
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 15/214 (7%)
Query: 596 KATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALK 654
K +D++D K +GKG V + +G A K N++ LS D + E +
Sbjct: 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR--DFQKLEREARICR 83
Query: 655 EIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKEL-GWNRRINVIKGVAN 713
+++H N V+ H +LV + + G L +D+ A+E + I+ +
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILE 139
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEA---HVSDFGIAKFVGPHSSNWTEFAGTFG 770
+++Y H + I+HR++ +N+LL S + ++DFG+A V S W FAGT G
Sbjct: 140 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPG 195
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y +PE+ ++ D+++ GV+++ ++ G P
Sbjct: 196 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 606 CIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
IGKG V A + +G VAVK + L N + + EV +K + H N VK
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQL--NSSSLQKLFREVRIMKVLNHPNIVKL 71
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINV---IKGVANALSYLHHD 721
+LV EY G + D + A GW + + + +A+ Y H
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVF----DYLVAH--GWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIA-KFVGPHSSNWTEFAGTFGYAAPEIAYTM 780
I+HRD+ ++N+LLD++ ++DFG + +F + F G+ YAAPE+
Sbjct: 126 F---IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQGK 180
Query: 781 RAT-EKYDVYSFGVLVFEVIKGNHPRD 806
+ + DV+S GV+++ ++ G+ P D
Sbjct: 181 KYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 40/220 (18%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNE--VLALKEIRHRNNVKF 664
IG+G G+VYK L VAVK F+ A+ F+NE + + + H N +F
Sbjct: 21 IGRGRYGAVYKGSLDERP-VAVKVFS-------FANRQNFINEKNIYRVPLMEHDNIARF 72
Query: 665 ----HGFCYNGPHSFL-VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH 719
+G +L V EY GSL + L + W + V L+YLH
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLH 128
Query: 720 HDC------LPSIIHRDISSKNVLLDSNFEAHVSDFGIA------KFVGPHSSNWTEFA- 766
+ P+I HRD++S+NVL+ ++ +SDFG++ + V P + +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 767 -GTFGYAAPEI---AYTMR----ATEKYDVYSFGVLVFEV 798
GT Y APE+ A +R A ++ D+Y+ G++ +E+
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+ + VAVK L G M+ FL E +K ++H V+ +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKT----LKPGTMSVQ-AFLEEANLMKTLQHDKLVRLYA 74
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+++ E++ +GSL L D K L + I+ +A ++Y+ +
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERK---NY 130
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG-TFGYAAPEIAYTMRATEK 785
IHRD+ + NVL+ + ++DFG+A+ + + E A + APE T K
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 786 YDVYSFGVLVFEVI 799
+V+SFG+L++E++
Sbjct: 191 SNVWSFGILLYEIV 204
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 607 IGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK-- 663
+G G G VYK + +G + A+K + ++G+ + +E E+ LK+ H N+
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMD---VTGD--EEEEIKQEINMLKKYSHHRNIATY 86
Query: 664 FHGFCYNGP-----HSFLVCEYLDRGSLARIL----GDDVTAKELGWNRRINVIKGVANA 714
+ F P +LV E+ GS+ ++ G+ + + + + + + +
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY-----ICREILRG 141
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
LS+LH +IHRDI +NVLL N E + DFG++ + F GT + AP
Sbjct: 142 LSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAP 198
Query: 775 EIAYTMRATE-----KYDVYSFGVLVFEVIKGNHP 804
E+ + K D++S G+ E+ +G P
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G+ V K EL +G VAVK N Q + ++ + E+ LK RH + +K +
Sbjct: 26 VGTFGKVKVGKHEL-TGHKVAVKILNRQKIR-SLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
F+V EY+ G L + + E R + + + + + Y H +
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRR---LFQQILSGVDYCHRHM---V 137
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE-IAYTMRATEK 785
+HRD+ +NVLLD++ A ++DFG++ + G+ YAAPE I+ + A +
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCGSPNYAAPEVISGRLYAGPE 196
Query: 786 YDVYSFGVLVFEVIKGNHPRD 806
D++S GV+++ ++ G P D
Sbjct: 197 VDIWSSGVILYALLCGTLPFD 217
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 31/239 (12%)
Query: 607 IGKGGQGSVY--KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+G G G V + +LPS ++V + + +FL E + + H N ++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGD---DVTAKELGWNRRINVIKGVANALSYLHHD 721
G +V E ++ GSL L T +L + +++G+A+ + YL
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSD- 165
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIA 777
+HRD++++N+L++SN VSDFG+++ + P ++ +T G + +PE
Sbjct: 166 --MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAI 222
Query: 778 YTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKILDP--RLPTP 833
+ T DV+S+G++++EV+ G P DV K +D RLP P
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYRLPPP 272
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 6/198 (3%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+GKGG ++ V K + L ++ E+ + + H++ V FHG
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
F + F+V E R SL + K L ++ + YLH + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKY 786
IHRD+ N+ L+ + E + DFG+A V GT Y APE+ + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 787 DVYSFGVLVFEVIKGNHP 804
DV+S G +++ ++ G P
Sbjct: 199 DVWSIGCIMYTLLVGKPP 216
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 629 KKFNSQLLSGNMADHDEFLNEVLALKEIR-HRNNVKFHGFCYNGPHSFLVCEYLDRGSLA 687
+ F +++S M + + E+ ALK H N VK H ++ H+FLV E L+ G L
Sbjct: 37 QAFAVKIISKRMEANTQ--KEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94
Query: 688 RILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL---DSNFEA 744
+ K +++ + +A+S++H ++HRD+ +N+L + N E
Sbjct: 95 ERIK---KKKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEI 148
Query: 745 HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ DFG A+ P + T YAAPE+ E D++S GV+++ ++ G P
Sbjct: 149 KIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 31/239 (12%)
Query: 607 IGKGGQGSVY--KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+G G G V + +LPS ++V + + +FL E + + H N ++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGD---DVTAKELGWNRRINVIKGVANALSYLHHD 721
G +V E ++ GSL L T +L + +++G+A+ + YL
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSD- 165
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT--FGYAAPEIA 777
+HRD++++N+L++SN VSDFG+++ + P ++ +T G + +PE
Sbjct: 166 --MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTSPEAI 222
Query: 778 YTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKILDP--RLPTP 833
+ T DV+S+G++++EV+ G P DV K +D RLP P
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYRLPPP 272
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 6/198 (3%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+GKGG ++ V K + L ++ E+ + + H++ V FHG
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
F + F+V E R SL + K L ++ + YLH + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKY 786
IHRD+ N+ L+ + E + DFG+A V GT Y APE+ + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 787 DVYSFGVLVFEVIKGNHP 804
DV+S G +++ ++ G P
Sbjct: 199 DVWSIGCIMYTLLVGKPP 216
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 606 CIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
IGKG V A + +G VAVK + L N + + EV +K + H N VK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQL--NSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
+LV EY G + L KE + + + +A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF-- 133
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIA-KFVGPHSSNWTEFAGTFGYAAPEIAYTMRAT 783
I+HRD+ ++N+LLD++ ++DFG + +F + F G+ YAAPE+ +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 784 -EKYDVYSFGVLVFEVIKGNHPRD 806
+ DV+S GV+++ ++ G+ P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 606 CIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
IGKG V A + +G VAVK + L N + + EV +K + H N VK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQL--NSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
+LV EY G + L KE + + + +A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF-- 133
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIA-KFVGPHSSNWTEFAGTFGYAAPEIAYTMRAT 783
I+HRD+ ++N+LLD++ ++DFG + +F + F G+ YAAPE+ +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 784 -EKYDVYSFGVLVFEVIKGNHPRD 806
+ DV+S GV+++ ++ G+ P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 601 FDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
F+ K +G G V AE +G + AVK + L G + + NE+ L++I+H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIE---NEIAVLRKIKHE 80
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSL-ARILGDDV-TAKELGWNRRINVIKGVANALSY 717
N V + H +LV + + G L RI+ T K+ +I+ V +A+ Y
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS-----TLIRQVLDAVYY 135
Query: 718 LHHDCLPSIIHRDISSKNVLL---DSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
LH I+HRD+ +N+L D + +SDFG++K G T GT GY AP
Sbjct: 136 LHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA-CGTPGYVAP 191
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
E+ ++ D +S GV+ + ++ G P
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 4/199 (2%)
Query: 607 IGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG+G VY+A L G VA+KK L A D + E+ LK++ H N +K++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD-CIKEIDLLKQLNHPNVIKYY 98
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
+V E D G L+R++ K L R V K S L H
Sbjct: 99 ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPER--TVWKYFVQLCSALEHMHSRR 156
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEK 785
++HRDI NV + + + D G+ +F ++ GT Y +PE + K
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFK 216
Query: 786 YDVYSFGVLVFEVIKGNHP 804
D++S G L++E+ P
Sbjct: 217 SDIWSLGCLLYEMAALQSP 235
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDIV-AVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
DF IGKG G V A + ++ AVK + + + + LK ++H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
V H + V +Y++ G L L + E R +A+AL YL
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE---PRARFYAAEIASALGYL 155
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY 778
H +I++RD+ +N+LLDS ++DFG+ K H+S + F GT Y APE+ +
Sbjct: 156 HSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH 212
Query: 779 TMRATEKYDVYSFGVLVFEVIKGNHP 804
D + G +++E++ G P
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 6/198 (3%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+GKGG ++ V K + L ++ E+ + + H++ V FHG
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
F + F+V E R SL + K L ++ + YLH + +
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 142
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKY 786
IHRD+ N+ L+ + E + DFG+A V GT Y APE+ + +
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 202
Query: 787 DVYSFGVLVFEVIKGNHP 804
DV+S G +++ ++ G P
Sbjct: 203 DVWSIGCIMYTLLVGKPP 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 18/216 (8%)
Query: 596 KATDDFDEKFCIGKGGQGSVYKA--ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLAL 653
+ TDD+ +GKG V + + P+ + A K N++ LS DH + E
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQE-YAAKIINTKKLSAR--DHQKLEREARIC 84
Query: 654 KEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRI-NVIKGVA 712
+ ++H N V+ H +LV + + G L +D+ A+E + I +
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELF----EDIVAREYYSEADASHCIHQIL 140
Query: 713 NALSYLH-HDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGIAKFVGPHSSNWTEFAGT 768
+++++H HD I+HRD+ +N+LL S + ++DFG+A V W FAGT
Sbjct: 141 ESVNHIHQHD----IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGT 196
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
GY +PE+ + D+++ GV+++ ++ G P
Sbjct: 197 PGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 30/216 (13%)
Query: 607 IGKGGQGSVYKAELPSGD--------IVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK +++D ++E+ +K I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG-------------DDVTAKELGWNRR 704
H+N + G C +++ EY +G+L L + V +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTE 764
++ +A + YL IHRD++++NVL+ N ++DFG+A+ +
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 765 FAGTF--GYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
G + APE + T + DV+SFGVL++E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMAD--------HDEFLNEVLALK 654
+G G G V + +G I +KK SQ G +D H+E NE+ LK
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKK--SQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 655 EIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANA 714
+ H N +K + + +LV E+ + G L + + + N++K + +
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI---INRHKFDECDAANIMKQILSG 158
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSN---FEAHVSDFGIAKFVGPHSSNWTEFAGTFGY 771
+ YLH +I+HRDI +N+LL++ + DFG++ F + GT Y
Sbjct: 159 ICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK-DYKLRDRLGTAYY 214
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
APE+ + EK DV+S GV+++ ++ G P
Sbjct: 215 IAPEVL-KKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 13/211 (6%)
Query: 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI 656
+D + + +GKG G V + +G AVK + + + D + L EV LK++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQL 89
Query: 657 RHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALS 716
H N +K + F + + +LV E G L + ++ K +I+ V + ++
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGIT 146
Query: 717 YLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
Y+H + I+HRD+ +N+LL+S + + DFG++ S + GT Y A
Sbjct: 147 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIA 202
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE+ + EK DV+S GV+++ ++ G P
Sbjct: 203 PEVLHGT-YDEKCDVWSTGVILYILLSGCPP 232
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 30/216 (13%)
Query: 607 IGKGGQGSVYKAELPSGD--------IVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK +++D ++E+ +K I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG-------------DDVTAKELGWNRR 704
H+N + G C +++ EY +G+L L + V +++ +
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--PHSSNW 762
++ +A + YL IHRD++++NVL+ N ++DFG+A+ + +
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
T + APE + T + DV+SFGVL++E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 6/198 (3%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+GKGG ++ V K + L ++ E+ + + H++ V FHG
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
F + F+V E R SL + K L ++ + YLH + +
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 162
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKY 786
IHRD+ N+ L+ + E + DFG+A V GT Y APE+ + +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 787 DVYSFGVLVFEVIKGNHP 804
DV+S G +++ ++ G P
Sbjct: 223 DVWSIGCIMYTLLVGKPP 240
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 30/216 (13%)
Query: 607 IGKGGQGSVYKAELPSGD--------IVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK +++D ++E+ +K I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG-------------DDVTAKELGWNRR 704
H+N + G C +++ EY +G+L L + V +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--PHSSNW 762
++ +A + YL IHRD++++NVL+ N ++DFG+A+ + +
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
T + APE + T + DV+SFGVL++E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 606 CIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
IGKG V A + +G VAVK + L N + + EV +K + H N VK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQL--NSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
+LV EY G + L KE + + + +A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF-- 133
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIA-KFVGPHSSNWTEFAGTFGYAAPEIAYTMRAT 783
I+HRD+ ++N+LLD++ ++DFG + +F + F G YAAPE+ +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 784 -EKYDVYSFGVLVFEVIKGNHPRD 806
+ DV+S GV+++ ++ G+ P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 30/216 (13%)
Query: 607 IGKGGQGSVYKAELPSGD--------IVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK +++D ++E+ +K I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG-------------DDVTAKELGWNRR 704
H+N + G C +++ EY +G+L L + V +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTE 764
++ +A + YL IHRD++++NVL+ N ++DFG+A+ +
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 765 FAGTF--GYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
G + APE + T + DV+SFGVL++E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 105/234 (44%), Gaps = 41/234 (17%)
Query: 583 LNFDGKIMHEEIIKATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMA 641
+NFD H EI++A IGKG G V + + + A+K N Q
Sbjct: 12 VNFD----HFEILRA---------IGKGSFGKVCIVQKNDTKKMYAMKYMNKQ----KCV 54
Query: 642 DHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF-------LVCEYLDRGSLARILGDDV 694
+ +E N KE++ ++ H F N +SF +V + L G L L +V
Sbjct: 55 ERNEVRN---VFKELQIMQGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNV 110
Query: 695 TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754
KE I + AL YL + IIHRD+ N+LLD + H++DF IA
Sbjct: 111 HFKEETVKL---FICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAM 164
Query: 755 VGPHSSNWTEFAGTFGYAAPEIAYTMRATEKY----DVYSFGVLVFEVIKGNHP 804
+ P + T AGT Y APE+ ++ R Y D +S GV +E+++G P
Sbjct: 165 L-PRETQITTMAGTKPYMAPEM-FSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 6/198 (3%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+GKGG ++ V K + L ++ E+ + + H++ V FHG
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
F + F+V E R SL + K L ++ + YLH + +
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 160
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKY 786
IHRD+ N+ L+ + E + DFG+A V GT Y APE+ + +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 787 DVYSFGVLVFEVIKGNHP 804
DV+S G +++ ++ G P
Sbjct: 221 DVWSIGCIMYTLLVGKPP 238
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 35 GKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 95 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 151
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 212 SSDLWALGCIIYQLVAGLPP 231
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 15 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 74
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 75 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 131
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 191
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 192 SSDLWALGCIIYQLVAGLPP 211
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 15/214 (7%)
Query: 596 KATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALK 654
K +D++D K +GKG V + +G A K N++ LS D + E +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR--DFQKLEREARICR 60
Query: 655 EIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRI-NVIKGVAN 713
+++H N V+ H +LV + + G L +D+ A+E + I+ +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILE 116
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGIAKFVGPHSSNWTEFAGTFG 770
+++Y H + I+HR++ +N+LL S + ++DFG+A V S W FAGT G
Sbjct: 117 SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPG 172
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y +PE+ ++ D+++ GV+++ ++ G P
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 607 IGKGGQGSVYKAEL--PSGDIV--AVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
+G G G V + E PSG V AVK +LS A D+F+ EV A+ + HRN +
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVNAMHSLDHRNLI 84
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ +G P +V E GSL L LG R V VA + YL
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 140
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWT---EFAGTFGYAAPEIAYT 779
IHRD++++N+LL + + DFG+ + + + ++ F + APE T
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHP 804
+ D + FGV ++E+ G P
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 606 CIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
IGKG V A + +G VAV+ + L N + + EV +K + H N VK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQL--NSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
+LV EY G + L KE + + + +A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF-- 133
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIA-KFVGPHSSNWTEFAGTFGYAAPEIAYTMRAT 783
I+HRD+ ++N+LLD++ ++DFG + +F + F G+ YAAPE+ +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 784 -EKYDVYSFGVLVFEVIKGNHPRD 806
+ DV+S GV+++ ++ G+ P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 607 IGKGGQGSVYKAEL--PSGDIV--AVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
+G G G V + E PSG V AVK +LS A D+F+ EV A+ + HRN +
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVNAMHSLDHRNLI 78
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ +G P +V E GSL L LG R V VA + YL
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 134
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWT---EFAGTFGYAAPEIAYT 779
IHRD++++N+LL + + DFG+ + + + ++ F + APE T
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHP 804
+ D + FGV ++E+ G P
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 90/206 (43%), Gaps = 15/206 (7%)
Query: 607 IGKGGQGSVYKAEL--PSGDIV--AVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
+G G G V + E PSG V AVK +LS A D+F+ EV A+ + HRN +
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVNAMHSLDHRNLI 84
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ +G P +V E GSL L LG R V VA + YL
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 140
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV---GPHSSNWTEFAGTFGYAAPEIAYT 779
IHRD++++N+LL + + DFG+ + + H F + APE T
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHP 804
+ D + FGV ++E+ G P
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 30/216 (13%)
Query: 607 IGKGGQGSVYKAELPSGD--------IVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK +++D ++E+ +K I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSD---LVSEMEMMKMIGK 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG-------------DDVTAKELGWNRR 704
H+N + G C +++ EY +G+L L + V +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--PHSSNW 762
++ +A + YL IHRD++++NVL+ N ++DFG+A+ + +
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
T + APE + T + DV+SFGVL++E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 14 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 73
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 74 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 130
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 190
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 191 SSDLWALGCIIYQLVAGLPP 210
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 99
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 100 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 156
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 216
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 217 SSDLWALGCIIYQLVAGLPP 236
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 30/216 (13%)
Query: 607 IGKGGQGSVYKAELPSGD--------IVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK +++D ++E+ +K I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG-------------DDVTAKELGWNRR 704
H+N + G C +++ EY +G+L L + V +++ +
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--PHSSNW 762
++ +A + YL IHRD++++NVL+ N ++DFG+A+ + +
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
T + APE + T + DV+SFGVL++E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 607 IGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDE-----FLNEVLALKEIRHRN 660
IG+G G+V+KA+ + +IVA+K+ + D DE L E+ LKE++H+N
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVR-------LDDDDEGVPSSALREICLLKELKHKN 62
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHH 720
V+ H ++ LV E+ D+ L + D +L + + + L + H
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYF--DSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 721 DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTM 780
+++HRD+ +N+L++ N E ++DFG+A+ G ++ T Y P++ +
Sbjct: 120 R---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 781 R-ATEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G + E+ P
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARP 201
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 13 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 72
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 73 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 129
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 189
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 190 SSDLWALGCIIYQLVAGLPP 209
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 12 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 71
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 72 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 128
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 188
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 189 SSDLWALGCIIYQLVAGLPP 208
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 98 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 154
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 214
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 215 SSDLWALGCIIYQLVAGLPP 234
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 679 EYLDRGSLARILGDDVTAKE---LGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y ++ AK L + R+I + +AL YLH I
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 153
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A++
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASK 213
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 214 SSDLWALGCIIYQLVAGLPP 233
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 6/198 (3%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+GKGG ++ V K + L ++ E+ + + H++ V FHG
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
F + F+V E R SL + K L ++ + YLH + +
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 136
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKY 786
IHRD+ N+ L+ + E + DFG+A V GT Y APE+ + +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 787 DVYSFGVLVFEVIKGNHP 804
DV+S G +++ ++ G P
Sbjct: 197 DVWSIGCIMYTLLVGKPP 214
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 153
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 214 SSDLWALGCIIYQLVAGLPP 233
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 601 FDEKFCI----GKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
F E++ I GKG G V K + + AVK N S D L EV LK+
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKA--SAKNKDTSTILREVELLKK 77
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+ H N +K + ++V E G L + + K + +IK V + +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAARIIKQVFSGI 134
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
+Y+H +I+HRD+ +N+LL+S + + + DFG++ ++ + GT Y
Sbjct: 135 TYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRIGTAYYI 190
Query: 773 APEIAYTMRAT--EKYDVYSFGVLVFEVIKGNHP 804
APE+ +R T EK DV+S GV+++ ++ G P
Sbjct: 191 APEV---LRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 30/216 (13%)
Query: 607 IGKGGQGSVYKAELPSGD--------IVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK +++D ++E+ +K I +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 145
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG-------------DDVTAKELGWNRR 704
H+N + G C +++ EY +G+L L + V +++ +
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--PHSSNW 762
++ +A + YL IHRD++++NVL+ N ++DFG+A+ + +
Sbjct: 206 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
T + APE + T + DV+SFGVL++E+
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 96/183 (52%), Gaps = 14/183 (7%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+ NL+ L+ LD+ SN++S + + KL L L NQ+ P +G L+ +D+L+L
Sbjct: 168 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 223
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
N L +L +L+NL L L N +S P + L L +L L NQ S P
Sbjct: 224 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-- 277
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYL 278
L L++LT + L N L I PI NLK+L+ L L+ N ++ P + +L+ L+ L+
Sbjct: 278 LAGLTALTNLELNENQLE-DISPI-SNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 333
Query: 279 YNN 281
YNN
Sbjct: 334 YNN 336
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 138/305 (45%), Gaps = 49/305 (16%)
Query: 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281
L++LT ++ NN L+ P L NL L + ++ NQ+ P + NL++L L L+NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 282 GLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYE--AFGDHPNL 339
+ P + L +L+ LEL +N + + S L Q N ++ + + L
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDISALS-GLTSLQQLNFGNQVTDLKPLANLTTL 174
Query: 340 TFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHI-- 397
LD+S+N +IS + L + I + N IS P +G L L L+ N +
Sbjct: 175 ERLDISSNK-VSDISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD 230
Query: 398 VGKIPVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLL 457
+G + SLT L LDL+ N++S+ P + L
Sbjct: 231 IGTL----------------------------ASLTNLTDLDLANNQISNLAP--LSGLT 260
Query: 458 KLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNL 517
KL L L NQ+S+ P L L+ L+L+ N L E+I P + N+ +L L L NN+
Sbjct: 261 KLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNLTYLTLYFNNI 316
Query: 518 SDFIP 522
SD P
Sbjct: 317 SDISP 321
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+ +L+ L LDL +NQ+S L P + L +L L L NQ+ P + L+ + L L
Sbjct: 234 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 289
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
N L P + NL NL L LY N++S P + L L +L N+ S S
Sbjct: 290 NENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVS--S 343
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLH 255
L NL+++ +S +N +S P L NL ++ LGL+
Sbjct: 344 LANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 378
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 161/421 (38%), Gaps = 98/421 (23%)
Query: 102 LSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161
++ LQ LG + G + LN L ++ NQL I P L+D L +N
Sbjct: 43 VTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTD-ITPLKNLTKLVD--ILMNN 94
Query: 162 NLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGN 221
N I + L NL+NL L L+ N ++ P + L +L +L+LS N S LS
Sbjct: 95 NQIADI-TPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALS--G 149
Query: 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281
L+SL ++ F N ++ P L NL +L L + N+++ + L++L L NN
Sbjct: 150 LTSLQQLN-FGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNN 204
Query: 282 GLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTF 341
+ P +G L +L EL L N L+ + NLT
Sbjct: 205 QISDITP--LGILTNLDELSLNGNQLKDI--------------------GTLASLTNLTD 242
Query: 342 LDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKI 401
LDL+NN N + LS KL L L +N I
Sbjct: 243 LDLANNQIS--------NLAPLSGLT------------------KLTELKLGANQISNIS 276
Query: 402 PVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHY 461
P LT L L+L+ N+L P I NL L Y
Sbjct: 277 P--------------------------LAGLTALTNLELNENQLEDISP--ISNLKNLTY 308
Query: 462 LNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFI 521
L L N +S P L L L +N + + + N+ ++ L+ HN +SD
Sbjct: 309 LTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLT 364
Query: 522 P 522
P
Sbjct: 365 P 365
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 602 DEKF--CIGKGGQGSVYKAELPSGDI---VAVKKFNSQLLSGNMADHDEFLNEVLALKEI 656
D KF IG+G G V KA + + A+K+ + DH +F E+ L ++
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY---ASKDDHRDFAGELEVLCKL 72
Query: 657 RHRNNV-KFHGFCYNGPHSFLVCEYLDRGSL------ARILGDD-------VTAKELGWN 702
H N+ G C + + +L EY G+L +R+L D TA L
Sbjct: 73 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNW 762
+ ++ VA + YL IHRD++++N+L+ N+ A ++DFG+++ +
Sbjct: 133 QLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT 189
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
A + Y++ T DV+S+GVL++E++
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 225
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 602 DEKF--CIGKGGQGSVYKAELPSGDI---VAVKKFNSQLLSGNMADHDEFLNEVLALKEI 656
D KF IG+G G V KA + + A+K+ + DH +F E+ L ++
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY---ASKDDHRDFAGELEVLCKL 82
Query: 657 RHRNNV-KFHGFCYNGPHSFLVCEYLDRGSL------ARILGDD-------VTAKELGWN 702
H N+ G C + + +L EY G+L +R+L D TA L
Sbjct: 83 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNW 762
+ ++ VA + YL IHRD++++N+L+ N+ A ++DFG+++ +
Sbjct: 143 QLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT 199
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
A + Y++ T DV+S+GVL++E++
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 235
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 47/238 (19%)
Query: 595 IKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDE-----FLNE 649
++ DF+E +G+G G V KA +S+ + H E L+E
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKAR---------NALDSRYYAIKKIRHTEEKLSTILSE 52
Query: 650 VLALKEIRHRNNVKFHGFC-----YNGPHS--------FLVCEYLDRGSLARILGDDVTA 696
V+ L + H+ V+++ + P + F+ EY + G+L ++ +
Sbjct: 53 VMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLN 112
Query: 697 KELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756
++ R+ + + ALSY+H IIHRD+ N+ +D + + DFG+AK V
Sbjct: 113 QQRDEYWRL--FRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH 167
Query: 757 -------------PHSS-NWTEFAGTFGYAAPEIAY-TMRATEKYDVYSFGVLVFEVI 799
P SS N T GT Y A E+ T EK D+YS G++ FE+I
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 96/183 (52%), Gaps = 14/183 (7%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+ NL+ L+ LD+ SN++S + + KL L L NQ+ P +G L+ +D+L+L
Sbjct: 169 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 224
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
N L +L +L+NL L L N +S P + L L +L L NQ S P
Sbjct: 225 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-- 278
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYL 278
L L++LT + L N L I PI NLK+L+ L L+ N ++ P + +L+ L+ L+
Sbjct: 279 LAGLTALTNLELNENQLED-ISPI-SNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 334
Query: 279 YNN 281
YNN
Sbjct: 335 YNN 337
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 137/306 (44%), Gaps = 50/306 (16%)
Query: 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281
L++LT ++ NN L+ P L NL L + ++ NQ+ P + NL++L L L+NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 282 GLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTF 341
+ P + L +L+ LEL +N + + S L Q N S NLT
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDISALS-GLTSLQQLNFSSNQVTDLKPLANLTT 174
Query: 342 L---DLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHI- 397
L D+S+N +IS + L + I + N IS P +G L L L+ N +
Sbjct: 175 LERLDISSNK-VSDISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 230
Query: 398 -VGKIPVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNL 456
+G + SLT L LDL+ N++S+ P + L
Sbjct: 231 DIGTL----------------------------ASLTNLTDLDLANNQISNLAP--LSGL 260
Query: 457 LKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNN 516
KL L L NQ+S+ P L L+ L+L+ N L E+I P + N+ +L L L NN
Sbjct: 261 TKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNLTYLTLYFNN 316
Query: 517 LSDFIP 522
+SD P
Sbjct: 317 ISDISP 322
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+ +L+ L LDL +NQ+S L P + L +L L L NQ+ P + L+ + L L
Sbjct: 235 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 290
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
N L P + NL NL L LY N++S P + L L +L N+ S S
Sbjct: 291 NENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVS--S 344
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLH 255
L NL+++ +S +N +S P L NL ++ LGL+
Sbjct: 345 LANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 379
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 161/421 (38%), Gaps = 97/421 (23%)
Query: 102 LSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161
++ LQ LG + G + LN L ++ NQL I P L+D L +N
Sbjct: 43 VTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTD-ITPLKNLTKLVD--ILMNN 94
Query: 162 NLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGN 221
N I + L NL+NL L L+ N ++ P + L +L +L+LS N S LS
Sbjct: 95 NQIADI-TPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALS--G 149
Query: 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281
L+SL ++ +N ++ P L NL +L L + N+++ + L++L L NN
Sbjct: 150 LTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNN 205
Query: 282 GLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTF 341
+ P +G L +L EL L N L+ + NLT
Sbjct: 206 QISDITP--LGILTNLDELSLNGNQLKDI--------------------GTLASLTNLTD 243
Query: 342 LDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKI 401
LDL+NN N + LS KL L L +N I
Sbjct: 244 LDLANNQIS--------NLAPLSGLT------------------KLTELKLGANQISNIS 277
Query: 402 PVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHY 461
P LT L L+L+ N+L P I NL L Y
Sbjct: 278 P--------------------------LAGLTALTNLELNENQLEDISP--ISNLKNLTY 309
Query: 462 LNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFI 521
L L N +S P L L L +N + + + N+ ++ L+ HN +SD
Sbjct: 310 LTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLT 365
Query: 522 P 522
P
Sbjct: 366 P 366
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 96/183 (52%), Gaps = 14/183 (7%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+ NL+ L+ LD+ SN++S + + KL L L NQ+ P +G L+ +D+L+L
Sbjct: 169 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 224
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
N L +L +L+NL L L N +S P + L L +L L NQ S P
Sbjct: 225 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-- 278
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYL 278
L L++LT + L N L I PI NLK+L+ L L+ N ++ P + +L+ L+ L+
Sbjct: 279 LAGLTALTNLELNENQLED-ISPI-SNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 334
Query: 279 YNN 281
YNN
Sbjct: 335 YNN 337
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 141/307 (45%), Gaps = 52/307 (16%)
Query: 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281
L++LT ++ NN L+ P L NL L + ++ NQ+ P + NL++L L L+NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 282 GLYGFVPEEIGYLKSLSELELCTNLLRGVIP----HSIERVLLNQNNLSGKMYEAFGDHP 337
+ P + L +L+ LEL +N + + S++++ + N ++ + +
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTD--LKPLANLT 173
Query: 338 NLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHI 397
L LD+S+N +IS + L + I + N IS P +G L L L+ N +
Sbjct: 174 TLERLDISSNK-VSDISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL 229
Query: 398 --VGKIPVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGN 455
+G + SLT L LDL+ N++S+ P +
Sbjct: 230 KDIGTL----------------------------ASLTNLTDLDLANNQISNLAP--LSG 259
Query: 456 LLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHN 515
L KL L L NQ+S+ P L L+ L+L+ N L E+I P + N+ +L L L N
Sbjct: 260 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNLTYLTLYFN 315
Query: 516 NLSDFIP 522
N+SD P
Sbjct: 316 NISDISP 322
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+ +L+ L LDL +NQ+S L P + L +L L L NQ+ P + L+ + L L
Sbjct: 235 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 290
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
N L P + NL NL L LY N++S P + L L +L N+ S S
Sbjct: 291 NENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVS--S 344
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLH 255
L NL+++ +S +N +S P L NL ++ LGL+
Sbjct: 345 LANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 379
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 161/421 (38%), Gaps = 97/421 (23%)
Query: 102 LSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161
++ LQ LG + G + LN L ++ NQL I P L+D L +N
Sbjct: 43 VTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTD-ITPLKNLTKLVD--ILMNN 94
Query: 162 NLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGN 221
N I + L NL+NL L L+ N ++ P + L +L +L+LS N S LS
Sbjct: 95 NQIADI-TPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALS--G 149
Query: 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281
L+SL +S +N ++ P L NL +L L + N+++ + L++L L NN
Sbjct: 150 LTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNN 205
Query: 282 GLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTF 341
+ P +G L +L EL L N L+ + NLT
Sbjct: 206 QISDITP--LGILTNLDELSLNGNQLKDI--------------------GTLASLTNLTD 243
Query: 342 LDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKI 401
LDL+NN N + LS KL L L +N I
Sbjct: 244 LDLANNQIS--------NLAPLSGLT------------------KLTELKLGANQISNIS 277
Query: 402 PVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHY 461
P LT L L+L+ N+L P I NL L Y
Sbjct: 278 P--------------------------LAGLTALTNLELNENQLEDISP--ISNLKNLTY 309
Query: 462 LNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFI 521
L L N +S P L L L +N + + + N+ ++ L+ HN +SD
Sbjct: 310 LTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLT 365
Query: 522 P 522
P
Sbjct: 366 P 366
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 13/211 (6%)
Query: 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI 656
+D + + +GKG G V + +G AVK + + + D + L EV LK++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQL 83
Query: 657 RHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALS 716
H N +K + F + + +LV E G L + ++ K +I+ V + ++
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 717 YLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
Y+H + I+HRD+ +N+LL+S + + DFG++ S + GT Y A
Sbjct: 141 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYIA 196
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE+ + EK DV+S GV+++ ++ G P
Sbjct: 197 PEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 13/211 (6%)
Query: 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI 656
+D + + +GKG G V + +G AVK + + + D + L EV LK++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQL 106
Query: 657 RHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALS 716
H N +K + F + + +LV E G L + ++ K +I+ V + ++
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGIT 163
Query: 717 YLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
Y+H + I+HRD+ +N+LL+S + + DFG++ S + GT Y A
Sbjct: 164 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYIA 219
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE+ + EK DV+S GV+++ ++ G P
Sbjct: 220 PEVLHGT-YDEKCDVWSTGVILYILLSGCPP 249
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 42 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 101
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 102 LYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 158
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 218
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 219 SSDLWALGCIIYQLVAGLPP 238
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 30/216 (13%)
Query: 607 IGKGGQGSVYKAELPSGD--------IVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK +++D ++E+ +K I +
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 86
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG-------------DDVTAKELGWNRR 704
H+N + G C +++ EY +G+L L + V +++ +
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--PHSSNW 762
++ +A + YL IHRD++++NVL+ N ++DFG+A+ + +
Sbjct: 147 VSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
T + APE + T + DV+SFGVL++E+
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 153
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 214 SSDLWALGCIIYQLVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 98 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 154
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 214
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 215 SSDLWALGCIIYQLVAGLPP 234
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 96/183 (52%), Gaps = 14/183 (7%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+ NL+ L+ LD+ SN++S + + KL L L NQ+ P +G L+ +D+L+L
Sbjct: 173 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 228
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
N L +L +L+NL L L N +S P + L L +L L NQ S P
Sbjct: 229 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-- 282
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYL 278
L L++LT + L N L I PI NLK+L+ L L+ N ++ P + +L+ L+ L+
Sbjct: 283 LAGLTALTNLELNENQLE-DISPI-SNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 338
Query: 279 YNN 281
YNN
Sbjct: 339 YNN 341
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 139/313 (44%), Gaps = 65/313 (20%)
Query: 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281
L++LT ++ NN L+ P L NL L + ++ NQ+ P + NL++L L L+NN
Sbjct: 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 122
Query: 282 GLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDH----- 336
+ P + L +L+ LEL +N + + S L+ +FG+
Sbjct: 123 QITDIDP--LKNLTNLNRLELSSNTISDISALS---------GLTSLQQLSFGNQVTDLK 171
Query: 337 --PNLTFL---DLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLD 391
NLT L D+S+N +IS + L + I + N IS P +G L L
Sbjct: 172 PLANLTTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELS 227
Query: 392 LSSNHI--VGKIPVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSI 449
L+ N + +G + SLT L LDL+ N++S+
Sbjct: 228 LNGNQLKDIGTL----------------------------ASLTNLTDLDLANNQISNLA 259
Query: 450 PKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEK 509
P + L KL L L NQ+S+ P L L+ L+L+ N L E+I P + N+ +L
Sbjct: 260 P--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNLTY 313
Query: 510 LNLSHNNLSDFIP 522
L L NN+SD P
Sbjct: 314 LTLYFNNISDISP 326
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+ +L+ L LDL +NQ+S L P + L +L L L NQ+ P + L+ + L L
Sbjct: 239 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 294
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
N L P + NL NL L LY N++S P + L L +L N+ S S
Sbjct: 295 NENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVS--S 348
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLH 255
L NL+++ +S +N +S P L NL ++ LGL+
Sbjct: 349 LANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 383
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 161/421 (38%), Gaps = 98/421 (23%)
Query: 102 LSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161
++ LQ LG + G + LN L ++ NQL I P L+D L +N
Sbjct: 48 VTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTD-ITPLKNLTKLVD--ILMNN 99
Query: 162 NLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGN 221
N I + L NL+NL L L+ N ++ P + L +L +L+LS N S LS
Sbjct: 100 NQIADI-TPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALS--G 154
Query: 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281
L+SL +S F N ++ P L NL +L L + N+++ + L++L L NN
Sbjct: 155 LTSLQQLS-FGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNN 209
Query: 282 GLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTF 341
+ P +G L +L EL L N L+ + NLT
Sbjct: 210 QISDITP--LGILTNLDELSLNGNQLKDI--------------------GTLASLTNLTD 247
Query: 342 LDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKI 401
LDL+NN N + LS KL L L +N I
Sbjct: 248 LDLANNQIS--------NLAPLSGLT------------------KLTELKLGANQISNIS 281
Query: 402 PVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHY 461
P LT L L+L+ N+L P I NL L Y
Sbjct: 282 P--------------------------LAGLTALTNLELNENQLEDISP--ISNLKNLTY 313
Query: 462 LNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFI 521
L L N +S P L L L +N + + + N+ ++ L+ HN +SD
Sbjct: 314 LTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLT 369
Query: 522 P 522
P
Sbjct: 370 P 370
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 11/199 (5%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IGKG G VYK + + ++VA+K + L + ++ E+ L + ++
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
G +++ EYL GS +L L +++ + L YLH +
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLHSE---R 136
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEK 785
IHRDI + NVLL + ++DFG+A + F GT + APE+ K
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 786 YDVYSFGVLVFEVIKGNHP 804
D++S G+ E+ KG P
Sbjct: 197 ADIWSLGITAIELAKGEPP 215
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 13/211 (6%)
Query: 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI 656
+D + + +GKG G V + +G AVK + + + D + L EV LK++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQL 107
Query: 657 RHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALS 716
H N +K + F + + +LV E G L + ++ K +I+ V + ++
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGIT 164
Query: 717 YLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
Y+H + I+HRD+ +N+LL+S + + DFG++ S + GT Y A
Sbjct: 165 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYIA 220
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE+ + EK DV+S GV+++ ++ G P
Sbjct: 221 PEVLHGT-YDEKCDVWSTGVILYILLSGCPP 250
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 95 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 151
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 212 SSDLWALGCIIYQLVAGLPP 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 153
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 214 SSDLWALGCIIYQLVAGLPP 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 94 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 150
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 210
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 211 SSDLWALGCIIYQLVAGLPP 230
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 30/216 (13%)
Query: 607 IGKGGQGSVYKAELPSGD--------IVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK +++D ++E+ +K I +
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 88
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG-------------DDVTAKELGWNRR 704
H+N + G C +++ EY +G+L L + V +++ +
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--PHSSNW 762
++ +A + YL IHRD++++NVL+ N ++DFG+A+ + +
Sbjct: 149 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
T + APE + T + DV+SFGVL++E+
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 153
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 214 SSDLWALGCIIYQLVAGLPP 233
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 15/162 (9%)
Query: 648 NEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL-ARILGDDV-TAKELGWNRRI 705
NE+ LK+I+H N V + H +LV + + G L RIL V T K+
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---- 110
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLL---DSNFEAHVSDFGIAKFVGPHSSNW 762
VI+ V +A+ YLH + I+HRD+ +N+L + N + ++DFG++K +
Sbjct: 111 -VIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIM 164
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ GT GY APE+ ++ D +S GV+ + ++ G P
Sbjct: 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 153
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXK 213
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 214 SSDLWALGCIIYQLVAGLPP 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 95 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 151
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACK 211
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 212 SSDLWALGCIIYQLVAGLPP 231
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 607 IGKGGQGSVYKAELPSGDI-------VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G+G G VY+ + G + VA+K N + +M + EFLNE +KE
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRERIEFLNEASVMKEFNCH 88
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRG-------SLARILGDDVTAKELGWNRRINVIKGVA 712
+ V+ G G + ++ E + RG SL + ++ ++ I + +A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---- 768
+ ++YL+ + +HRD++++N ++ +F + DFG+ + + + +++ G
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI--YETDYYRKGGKGLLP 203
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ +PE T DV+SFGV+++E+
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 95 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 151
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 212 SSDLWALGCIIYQLVAGLPP 231
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 30/216 (13%)
Query: 607 IGKGGQGSVYKAELPSGD--------IVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK +++D ++E+ +K I +
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 91
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG-------------DDVTAKELGWNRR 704
H+N + G C +++ EY +G+L L + V +++ +
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--PHSSNW 762
++ +A + YL IHRD++++NVL+ N ++DFG+A+ + +
Sbjct: 152 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
T + APE + T + DV+SFGVL++E+
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 19 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 78
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 79 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 135
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 195
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 196 SSDLWALGCIIYQLVAGLPP 215
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 623 GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF----HGFCYNGPHSFLVC 678
G I+ F++ +L+ +A E+ ++L + I N V + H F V
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 679 EYL---DRGSLARILGDDVTAKELGWNRRIN---------VIKGVANALSYLHHDCLPSI 726
Y D L L + L + R+I + +AL YLH I
Sbjct: 94 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GI 150
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATE 784
IHRD+ +N+LL+ + ++DFG AK + P S + F GT Y +PE+ A +
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 210
Query: 785 KYDVYSFGVLVFEVIKGNHP 804
D+++ G ++++++ G P
Sbjct: 211 SSDLWALGCIIYQLVAGLPP 230
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 9/208 (4%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D+F+ +GKG G V A + +GD+ AVK ++ + D + + E L R
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD-DDVECTMTEKRILSLAR 81
Query: 658 HRNNVKFHGFCYNGPHS-FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALS 716
+ + C+ P F V E+++ G L + ++ R + +AL
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ---KSRRFDEARARFYAAEIISALM 138
Query: 717 YLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEI 776
+LH II+RD+ NVLLD ++DFG+ K + F GT Y APEI
Sbjct: 139 FLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEI 195
Query: 777 AYTMRATEKYDVYSFGVLVFEVIKGNHP 804
M D ++ GVL++E++ G+ P
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 14/202 (6%)
Query: 607 IGKGGQGSVYK-AELPSGDIVAVKKF-NSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+GKGG Y+ ++ + ++ A K S LL + + + E+ K + + + V F
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE--KMSTEIAIHKSLDNPHVVGF 91
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARI--LGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
HGF + ++V E R SL + VT E + R I+GV YLH++
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-QTIQGV----QYLHNN- 145
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
+IHRD+ N+ L+ + + + DFG+A + + GT Y APE+
Sbjct: 146 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 783 TEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G +++ ++ G P
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPP 225
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 607 IGKGGQGSVYKAELPSGDI-------VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G+G G VY+ + G + VA+K N + +M + EFLNE +KE
Sbjct: 23 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRERIEFLNEASVMKEFNCH 78
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRG-------SLARILGDDVTAKELGWNRRINVIKGVA 712
+ V+ G G + ++ E + RG SL + ++ ++ I + +A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---- 768
+ ++YL+ + +HRD++++N ++ +F + DFG+ + + + +++ G
Sbjct: 139 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI--YETDYYRKGGKGLLP 193
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ +PE T DV+SFGV+++E+
Sbjct: 194 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 606 CIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
IGKG V A + +G VA+K + L N + EV +K + H N VK
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKILNHPNIVKL 76
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
+L+ EY G + L V + + + + +A+ Y H
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYL---VAHGRMKEKEARSKFRQIVSAVQYCHQ---K 130
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
I+HRD+ ++N+LLD++ ++DFG + VG F G+ YAAPE+ +
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG---GKLDTFCGSPPYAAPELFQGKKY 187
Query: 783 T-EKYDVYSFGVLVFEVIKGNHPRD 806
+ DV+S GV+++ ++ G+ P D
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+GKG G V K + + AVK N S D L EV LK++ H N +K
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA--SAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
+ ++V E G L + + K + +IK V + ++Y+H +
Sbjct: 88 EILEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---N 141
Query: 726 IIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
I+HRD+ +N+LL+S + + + DFG++ ++ + GT Y APE+ +R
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRIGTAYYIAPEV---LRG 197
Query: 783 T--EKYDVYSFGVLVFEVIKGNHP 804
T EK DV+S GV+++ ++ G P
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+GKG G V K + + AVK N S D L EV LK++ H N +K
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA--SAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
+ ++V E G L + + K + +IK V + ++Y+H +
Sbjct: 88 EILEDSSSFYIVGELYTGGEL---FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---N 141
Query: 726 IIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
I+HRD+ +N+LL+S + + + DFG++ ++ + GT Y APE+ +R
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRIGTAYYIAPEV---LRG 197
Query: 783 T--EKYDVYSFGVLVFEVIKGNHP 804
T EK DV+S GV+++ ++ G P
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 14/202 (6%)
Query: 607 IGKGGQGSVYK-AELPSGDIVAVKKF-NSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+GKGG Y+ ++ + ++ A K S LL + + + E+ K + + + V F
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE--KMSTEIAIHKSLDNPHVVGF 107
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARI--LGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
HGF + ++V E R SL + VT E + R I+GV YLH++
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-QTIQGV----QYLHNN- 161
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
+IHRD+ N+ L+ + + + DFG+A + + GT Y APE+
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 783 TEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G +++ ++ G P
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPP 241
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 607 IGKGGQGSVYKAELPSGDI-------VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G+G G VY+ + G + VA+K N + +M + EFLNE +KE
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRERIEFLNEASVMKEFNCH 81
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKE-------LGWNRRINVIKGVA 712
+ V+ G G + ++ E + RG L L E ++ I + +A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---- 768
+ ++YL+ + +HRD++++N ++ +F + DFG+ + + + +++ G
Sbjct: 142 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI--YETDYYRKGGKGLLP 196
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ +PE T DV+SFGV+++E+
Sbjct: 197 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 607 IGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+GKG G V+ AE + A+K ++ M D E + + + H
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL--MDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 666 GFC--YNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCL 723
FC + F V EYL+ G L + + + +R + L +LH
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAAEIILGLQFLHS--- 136
Query: 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWTEFAGTFGYAAPEIAYTMR 781
I++RD+ N+LLD + ++DFG+ K +G +N F GT Y APEI +
Sbjct: 137 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN--XFCGTPDYIAPEILLGQK 194
Query: 782 ATEKYDVYSFGVLVFEVIKGNHP 804
D +SFGVL++E++ G P
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 607 IGKGGQGSVYKAELPSGDI-------VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G+G G VY+ + G + VA+K N + +M + EFLNE +KE
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRERIEFLNEASVMKEFNCH 75
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKE-------LGWNRRINVIKGVA 712
+ V+ G G + ++ E + RG L L E ++ I + +A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---- 768
+ ++YL+ + +HRD++++N ++ +F + DFG+ + + + +++ G
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI--YETDYYRKGGKGLLP 190
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ +PE T DV+SFGV+++E+
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 606 CIGKGGQGSVYKAEL--PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
CIG+G G V++ P +AV + + + + ++FL E L +++ H + VK
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMRQFDHPHIVK 103
Query: 664 FHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCL 723
G P +++ E G L L V L I ++ AL+YL
Sbjct: 104 LIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK-- 158
Query: 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYTMR 781
+HRDI+++NVL+ SN + DFG+++++ S+ + G + APE R
Sbjct: 159 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 216
Query: 782 ATEKYDVYSFGVLVFEVI 799
T DV+ FGV ++E++
Sbjct: 217 FTSASDVWMFGVCMWEIL 234
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 10 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 122
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 230
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 231 ILEKGERLPQPPICTID 247
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 606 CIGKGGQGSVYKAEL--PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
CIG+G G V++ P +AV + + + ++FL E L +++ H + VK
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVK 75
Query: 664 FHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCL 723
G P +++ E G L L V L I ++ AL+YL
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK-- 130
Query: 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYTMR 781
+HRDI+++NVL+ SN + DFG+++++ S+ + G + APE R
Sbjct: 131 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 782 ATEKYDVYSFGVLVFEVI 799
T DV+ FGV ++E++
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 606 CIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
IGKG V A + +G VA+K + L N + EV +K + H N VK
Sbjct: 22 TIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
+L+ EY G + L KE + + + +A+ Y H
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF---RQIVSAVQYCHQ---K 133
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
I+HRD+ ++N+LLD++ ++DFG + VG F G YAAPE+ +
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG---GKLDAFCGAPPYAAPELFQGKKY 190
Query: 783 T-EKYDVYSFGVLVFEVIKGNHPRD 806
+ DV+S GV+++ ++ G+ P D
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 607 IGKGGQGSVYKAELPSGDI-------VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G+G G VY+ + G + VA+K N + +M + EFLNE +KE
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRERIEFLNEASVMKEFNCH 88
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKE-------LGWNRRINVIKGVA 712
+ V+ G G + ++ E + RG L L E ++ I + +A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---- 768
+ ++YL+ + +HRD++++N ++ +F + DFG+ + + + +++ G
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI--YETDYYRKGGKGLLP 203
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ +PE T DV+SFGV+++E+
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 607 IGKGGQGSVYKAE--LPSGDIV--AVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
+G G G V + E PSG V AVK +LS A D+F+ EV A+ + HRN +
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVNAMHSLDHRNLI 78
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ +G P +V E GSL L LG R V VA + YL
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 134
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWT---EFAGTFGYAAPEIAYT 779
IHRD++++N+LL + + DFG+ + + + ++ F + APE T
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHP 804
+ D + FGV ++E+ G P
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 607 IGKGGQGSVYKAE--LPSGDIV--AVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
+G G G V + E PSG V AVK +LS A D+F+ EV A+ + HRN +
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVNAMHSLDHRNLI 74
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ +G P +V E GSL L LG R V VA + YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 130
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWT---EFAGTFGYAAPEIAYT 779
IHRD++++N+LL + + DFG+ + + + ++ F + APE T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHP 804
+ D + FGV ++E+ G P
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 607 IGKGGQGSVYKAE--LPSGDIV--AVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
+G G G V + E PSG V AVK +LS A D+F+ EV A+ + HRN +
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVNAMHSLDHRNLI 74
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ +G P +V E GSL L LG R V VA + YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 130
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWT---EFAGTFGYAAPEIAYT 779
IHRD++++N+LL + + DFG+ + + + ++ F + APE T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHP 804
+ D + FGV ++E+ G P
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 607 IGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDE-----FLNEVLALKEIRHRN 660
IG+G G+V+KA+ + +IVA+K+ + D DE L E+ LKE++H+N
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVR-------LDDDDEGVPSSALREICLLKELKHKN 62
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHH 720
V+ H ++ LV E+ D+ L + D +L + + + L + H
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYF--DSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 721 DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTM 780
+++HRD+ +N+L++ N E +++FG+A+ G ++ T Y P++ +
Sbjct: 120 R---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 781 R-ATEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G + E+ P
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 607 IGKGGQGSVYKAELPSGDI-------VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G+G G VY+ + G + VA+K N + +M + EFLNE +KE
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRERIEFLNEASVMKEFNCH 81
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKE-------LGWNRRINVIKGVA 712
+ V+ G G + ++ E + RG L L E ++ I + +A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---- 768
+ ++YL+ + +HRD++++N ++ +F + DFG+ + + + +++ G
Sbjct: 142 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI--YETDYYRKGGKGLLP 196
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ +PE T DV+SFGV+++E+
Sbjct: 197 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 85/208 (40%), Gaps = 7/208 (3%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RH 658
DFD IG+G V L D + K + L + D D E ++ H
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
V H F V EY++ G L + ++L ++ AL+YL
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLALNYL 122
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY 778
H II+RD+ NVLLDS ++D+G+ K + F GT Y APEI
Sbjct: 123 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 179
Query: 779 TMRATEKYDVYSFGVLVFEVIKGNHPRD 806
D ++ GVL+FE++ G P D
Sbjct: 180 GEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 606 CIGKGGQGSVYKAEL--PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
CIG+G G V++ P +AV + + + ++FL E L +++ H + VK
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVK 80
Query: 664 FHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCL 723
G P +++ E G L L V L I ++ AL+YL
Sbjct: 81 LIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK-- 135
Query: 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYTMR 781
+HRDI+++NVL+ SN + DFG+++++ S+ + G + APE R
Sbjct: 136 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 193
Query: 782 ATEKYDVYSFGVLVFEVI 799
T DV+ FGV ++E++
Sbjct: 194 FTSASDVWMFGVCMWEIL 211
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 12 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 124
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 232
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 233 ILEKGERLPQPPICTID 249
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 17 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 129
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 130 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 237
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 238 ILEKGERLPQPPICTID 254
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 13 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 125
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 233
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 234 ILEKGERLPQPPICTID 250
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 102/232 (43%), Gaps = 30/232 (12%)
Query: 586 DGKIMHEEIIKATDDFDEKFCIGKGGQGSVYKAEL---PSGDIVAVKKFNSQLLSGNMAD 642
D I HE ++ +D IGKG G VY E I K S++ M
Sbjct: 13 DVLIPHERVVTHSDR-----VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQ 65
Query: 643 HDEFLNEVLALKEIRHRNNVKFHGFCYNG---PHSFLVCEYLDRGSLARILGD---DVTA 696
+ FL E L ++ + H N + G PH L Y+ G L + + + T
Sbjct: 66 VEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL--PYMCHGDLLQFIRSPQRNPTV 123
Query: 697 KELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV- 755
K+L I+ VA + YL +HRD++++N +LD +F V+DFG+A+ +
Sbjct: 124 KDL-----ISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175
Query: 756 --GPHSSNWTEFAG-TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+S A + A E T R T K DV+SFGVL++E++ P
Sbjct: 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 29/256 (11%)
Query: 594 IIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEVL 651
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 45 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVI 708
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 157
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 158 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 214
Query: 769 --FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKI 825
+ A E T + DV+S+GV V+E++ G+ P D +++ I
Sbjct: 215 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISSI 265
Query: 826 LDP--RLPTPSPSVMD 839
L+ RLP P +D
Sbjct: 266 LEKGERLPQPPICTID 281
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 13 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 125
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 233
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 234 ILEKGERLPQPPICTID 250
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 607 IGKGGQGSVYKAELPSGDI-------VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G+G G VY+ + G + VA+K N + +M + EFLNE +KE
Sbjct: 24 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRERIEFLNEASVMKEFNCH 79
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKE-------LGWNRRINVIKGVA 712
+ V+ G G + ++ E + RG L L E ++ I + +A
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---- 768
+ ++YL+ + +HRD++++N ++ +F + DFG+ + + + +++ G
Sbjct: 140 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI--YETDYYRKGGKGLLP 194
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ +PE T DV+SFGV+++E+
Sbjct: 195 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 85/208 (40%), Gaps = 7/208 (3%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RH 658
DFD IG+G V L D + K + L + D D E ++ H
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
V H F V EY++ G L + ++L ++ AL+YL
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLALNYL 126
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY 778
H II+RD+ NVLLDS ++D+G+ K + F GT Y APEI
Sbjct: 127 HER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 183
Query: 779 TMRATEKYDVYSFGVLVFEVIKGNHPRD 806
D ++ GVL+FE++ G P D
Sbjct: 184 GEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 13 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 125
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 233
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 234 ILEKGERLPQPPICTID 250
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 51/240 (21%)
Query: 595 IKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDE-----FLNE 649
++ DF+E +G+G G V KA +S+ + H E L+E
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKAR---------NALDSRYYAIKKIRHTEEKLSTILSE 52
Query: 650 VLALKEIRHRNNVKFHGFC-----YNGPHS--------FLVCEYLDRGSLARILGDDVTA 696
V+ L + H+ V+++ + P + F+ EY + R L D + +
Sbjct: 53 VMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCEN----RTLYDLIHS 108
Query: 697 KELGWNRR--INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754
+ L R + + + ALSY+H IIHRD+ N+ +D + + DFG+AK
Sbjct: 109 ENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKN 165
Query: 755 VG-------------PHSS-NWTEFAGTFGYAAPEIAY-TMRATEKYDVYSFGVLVFEVI 799
V P SS N T GT Y A E+ T EK D+YS G++ FE+I
Sbjct: 166 VHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 601 FDEKFC--IGKGGQGSVYKAEL----PSGD----IVAVKKFNSQLLSGNMADHDEFLNEV 650
F+++F I G+G K EL P GD VAVK + ++AD E+
Sbjct: 18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD---LKKEI 74
Query: 651 LALKEIRHRNNVKFHGFCYN--GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI 708
L+ + H N VK+ G C G L+ E+L GSL L + ++ +++
Sbjct: 75 EILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYA 132
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWT----E 764
+ + YL +HRD++++NVL++S + + DFG+ K + T
Sbjct: 133 VQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR 189
Query: 765 FAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ F Y APE + DV+SFGV + E++
Sbjct: 190 DSPVFWY-APECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 20 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 78
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 79 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 132
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 133 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 240
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 241 ILEKGERLPQPPICTID 257
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 10 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 122
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 230
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 231 ILEKGERLPQPPICTID 247
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 16 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 74
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 75 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 128
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 129 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 236
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 237 ILEKGERLPQPPICTID 253
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 601 FDEKFC--IGKGGQGSVYKAEL----PSGD----IVAVKKFNSQLLSGNMADHDEFLNEV 650
F+++F I G+G K EL P GD VAVK + ++AD E+
Sbjct: 6 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD---LKKEI 62
Query: 651 LALKEIRHRNNVKFHGFCYN--GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI 708
L+ + H N VK+ G C G L+ E+L GSL L + ++ +++
Sbjct: 63 EILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYA 120
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWT----E 764
+ + YL +HRD++++NVL++S + + DFG+ K + T
Sbjct: 121 VQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR 177
Query: 765 FAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ F Y APE + DV+SFGV + E++
Sbjct: 178 DSPVFWY-APECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 14 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 72
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW 126
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 127 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 183
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 234
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 235 ILEKGERLPQPPICTID 251
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 27/220 (12%)
Query: 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EV 650
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI 56
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIK 709
K + H N VKF+G G +L EY G L + D+ E R + ++
Sbjct: 57 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 710 GVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAG 767
GV YLH I HRDI +N+LLD +SDFG+A ++ + G
Sbjct: 117 GVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 768 TFGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
T Y APE+ E DV+S G+++ ++ G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 27/220 (12%)
Query: 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EV 650
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI 56
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIK 709
K + H N VKF+G G +L EY G L + D+ E R + ++
Sbjct: 57 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 710 GVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAG 767
GV YLH I HRDI +N+LLD +SDFG+A ++ + G
Sbjct: 117 GVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 768 TFGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
T Y APE+ E DV+S G+++ ++ G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 27/220 (12%)
Query: 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EV 650
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI 56
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIK 709
K + H N VKF+G G +L EY G L + D+ E R + ++
Sbjct: 57 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 710 GVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAG 767
GV YLH I HRDI +N+LLD +SDFG+A ++ + G
Sbjct: 117 GVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 768 TFGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
T Y APE+ E DV+S G+++ ++ G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 607 IGKGGQGSVYKAELPSGDI-------VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G+G G VY+ + G + VA+K N + +M + EFLNE +KE
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRERIEFLNEASVMKEFNCH 82
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKE-------LGWNRRINVIKGVA 712
+ V+ G G + ++ E + RG L L E ++ I + +A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---- 768
+ ++YL+ + +HRD++++N ++ +F + DFG+ + + + +++ G
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI--YETDYYRKGGKGLLP 197
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ +PE T DV+SFGV+++E+
Sbjct: 198 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 12 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW 124
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 232
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 233 ILEKGERLPQPPICTID 249
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 606 CIGKGGQGSVYKAEL--PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
CIG+G G V++ P +AV + + + ++FL E L +++ H + VK
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVK 78
Query: 664 FHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCL 723
G P +++ E G L L V L I ++ AL+YL
Sbjct: 79 LIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK-- 133
Query: 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYTMR 781
+HRDI+++NVL+ SN + DFG+++++ S+ + G + APE R
Sbjct: 134 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 191
Query: 782 ATEKYDVYSFGVLVFEVI 799
T DV+ FGV ++E++
Sbjct: 192 FTSASDVWMFGVCMWEIL 209
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 607 IGKGGQGSVYKAELPSGDI-------VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G+G G VY+ + G + VA+K N + +M + EFLNE +KE
Sbjct: 55 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRERIEFLNEASVMKEFNCH 110
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKE-------LGWNRRINVIKGVA 712
+ V+ G G + ++ E + RG L L E ++ I + +A
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---- 768
+ ++YL+ + +HRD++++N ++ +F + DFG+ + + + +++ G
Sbjct: 171 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI--YETDYYRKGGKGLLP 225
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ +PE T DV+SFGV+++E+
Sbjct: 226 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 7 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 65
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 66 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 119
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 120 CVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 177 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 227
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 228 ILEKGERLPQPPICTID 244
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 10 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW 122
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 230
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 231 ILEKGERLPQPPICTID 247
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 115/256 (44%), Gaps = 29/256 (11%)
Query: 594 IIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEVL 651
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVI 708
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYL-----LNWC 123
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+A ++YL L +HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 124 VQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 769 --FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKI 825
+ A E T + DV+S+GV V+E++ G+ P D +++ I
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISSI 231
Query: 826 LDP--RLPTPSPSVMD 839
L+ RLP P +D
Sbjct: 232 LEKGERLPQPPICTID 247
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 11 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 69
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW 123
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 124 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 231
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 232 ILEKGERLPQPPICTID 248
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 13 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW 125
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 233
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 234 ILEKGERLPQPPICTID 250
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 30/216 (13%)
Query: 607 IGKGGQGSVYKAELPSGD--------IVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK +++D ++E+ +K I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG-------------DDVTAKELGWNRR 704
H+N + G C +++ Y +G+L L + V +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--PHSSNW 762
++ +A + YL IHRD++++NVL+ N ++DFG+A+ + +
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
T + APE + T + DV+SFGVL++E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 29/256 (11%)
Query: 594 IIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEVL 651
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 36 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVI 708
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 148
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 149 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 205
Query: 769 --FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKI 825
+ A E T + DV+S+GV V+E++ G+ P D +++ I
Sbjct: 206 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISSI 256
Query: 826 LDP--RLPTPSPSVMD 839
L+ RLP P +D
Sbjct: 257 LEKGERLPQPPICTID 272
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 602 DEKF--CIGKGGQGSVYKAELPSGDI---VAVKKFNSQLLSGNMADHDEFLNEVLALKEI 656
D KF IG+G G V KA + + A+K+ + DH +F E+ L ++
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY---ASKDDHRDFAGELEVLCKL 79
Query: 657 RHRNNV-KFHGFCYNGPHSFLVCEYLDRGSL------ARILGDD-------VTAKELGWN 702
H N+ G C + + +L EY G+L +R+L D TA L
Sbjct: 80 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNW 762
+ ++ VA + YL IHR+++++N+L+ N+ A ++DFG+++ +
Sbjct: 140 QLLHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKT 196
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
A + Y++ T DV+S+GVL++E++
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 232
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 27/220 (12%)
Query: 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EV 650
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI 56
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIK 709
K + H N VKF+G G +L EY G L + D+ E R + ++
Sbjct: 57 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 116
Query: 710 GVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAG 767
GV YLH I HRDI +N+LLD +SDFG+A ++ + G
Sbjct: 117 GVV----YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 169
Query: 768 TFGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
T Y APE+ E DV+S G+++ ++ G P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 607 IGKGGQGSVYK-AELPSGDIVAVKKF-NSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+GKGG Y+ ++ + ++ A K S LL + + + E+ K + + + V F
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE--KMSTEIAIHKSLDNPHVVGF 107
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARI--LGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
HGF + ++V E R SL + VT E + R I+GV YLH++
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-QTIQGV----QYLHNN- 161
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
+IHRD+ N+ L+ + + + DFG+A + GT Y APE+
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 783 TEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G +++ ++ G P
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPP 241
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 607 IGKGGQGSVYK-AELPSGDIVAVKKF-NSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
+GKGG Y+ ++ + ++ A K S LL + + + E+ K + + + V F
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE--KMSTEIAIHKSLDNPHVVGF 107
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARI--LGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
HGF + ++V E R SL + VT E + R I+GV YLH++
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-QTIQGV----QYLHNN- 161
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
+IHRD+ N+ L+ + + + DFG+A + GT Y APE+
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 783 TEKYDVYSFGVLVFEVIKGNHP 804
+ + D++S G +++ ++ G P
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPP 241
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 115/256 (44%), Gaps = 29/256 (11%)
Query: 594 IIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEVL 651
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVI 708
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYL-----LNWC 124
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+A ++YL L +HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 125 VQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 769 --FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKI 825
+ A E T + DV+S+GV V+E++ G+ P D +++ I
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISSI 232
Query: 826 LDP--RLPTPSPSVMD 839
L+ RLP P +D
Sbjct: 233 LEKGERLPQPPICTID 248
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 85/208 (40%), Gaps = 7/208 (3%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RH 658
DFD IG+G V L D + K + L + D D E ++ H
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYL 718
V H F V EY++ G L + ++L ++ AL+YL
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLALNYL 137
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY 778
H II+RD+ NVLLDS ++D+G+ K + F GT Y APEI
Sbjct: 138 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 194
Query: 779 TMRATEKYDVYSFGVLVFEVIKGNHPRD 806
D ++ GVL+FE++ G P D
Sbjct: 195 GEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 4 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 62
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 63 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 116
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 117 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 224
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 225 ILEKGERLPQPPICTID 241
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 27/220 (12%)
Query: 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EV 650
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEI 55
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIK 709
K + H N VKF+G G +L EY G L + D+ E R + ++
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA 115
Query: 710 GVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAG 767
GV YLH I HRDI +N+LLD +SDFG+A ++ + G
Sbjct: 116 GVV----YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 168
Query: 768 TFGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
T Y APE+ E DV+S G+++ ++ G P D
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 607 IGKGGQGSVYKAELPSGDI-------VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G+G G VY+ + G + VA+K N + +M + EFLNE +KE
Sbjct: 18 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRERIEFLNEASVMKEFNCH 73
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKE-------LGWNRRINVIKGVA 712
+ V+ G G + ++ E + RG L L E ++ I + +A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--G 770
+ ++YL+ + +HRD++++N ++ +F + DFG+ + + G
Sbjct: 134 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ +PE T DV+SFGV+++E+
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 606 CIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
IGKG V A + +G VAVK + L N + + EV K + H N VK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQL--NSSSLQKLFREVRIXKVLNHPNIVKL 78
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
+LV EY G + L KE + + + +A+ Y H
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF---RQIVSAVQYCHQKF-- 133
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIA-KFVGPHSSNWTEFAGTFGYAAPEIAYTMRAT 783
I+HRD+ ++N+LLD++ ++DFG + +F + F G YAAPE+ +
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEFT--FGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 784 -EKYDVYSFGVLVFEVIKGNHPRD 806
+ DV+S GV+++ ++ G+ P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 595 IKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLAL 653
+ ++ F + +G G +VYK +G VA+K+ L + E+ +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK---LDSEEGTPSTAIREISLM 57
Query: 654 KEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK---- 709
KE++H N V+ + + LV E++D L + + D T +N++K
Sbjct: 58 KELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYM-DSRTVGNTPRGLELNLVKYFQW 115
Query: 710 GVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF 769
+ L++ H + I+HRD+ +N+L++ + + DFG+A+ G + ++ T
Sbjct: 116 QLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTL 172
Query: 770 GYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGN 802
Y AP++ R + D++S G ++ E+I G
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 606 CIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF 664
IGKG V A + +G VAVK + L N + EV +K + H N VK
Sbjct: 22 TIGKGNFAKVKLARHVLTGREVAVKIIDKTQL--NPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
+LV EY G + L KE + + + +A+ Y H
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQ---K 133
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
I+HRD+ ++N+LLD + ++DFG + VG + F G+ YAAPE+ +
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVG---NKLDTFCGSPPYAAPELFQGKKY 190
Query: 783 T-EKYDVYSFGVLVFEVIKGNHPRD 806
+ DV+S GV+++ ++ G+ P D
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 62/206 (30%), Positives = 90/206 (43%), Gaps = 15/206 (7%)
Query: 607 IGKGGQGSVYKAE--LPSGDIV--AVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
+G G G V + E PSG V AVK +LS A D+F+ EV A+ + HRN +
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA-MDDFIREVNAMHSLDHRNLI 74
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ +G P +V E GSL L LG R V VA + YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 130
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV---GPHSSNWTEFAGTFGYAAPEIAYT 779
IHRD++++N+LL + + DFG+ + + H F + APE T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHP 804
+ D + FGV ++E+ G P
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 9/203 (4%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELN 60
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
H N VK + +LV E+L + + +T L + + + + LS+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLSF 118
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H ++HRD+ +N+L+++ ++DFG+A+ G +T T Y APEI
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 778 YTMR-ATEKYDVYSFGVLVFEVI 799
+ + D++S G + E++
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELN 67
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVANAL 715
H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
S+ ++HRD+ +N+L+++ ++DFG+A+ G +T T Y APE
Sbjct: 128 SH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 180
Query: 776 IAYTMR-ATEKYDVYSFGVLVFEVI 799
I + + D++S G + E++
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMV 205
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 607 IGKGGQGSVYKAELPSGDI-------VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G+G G VY+ + G + VA+K N + +M + EFLNE +KE
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRERIEFLNEASVMKEFNCH 75
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKE-------LGWNRRINVIKGVA 712
+ V+ G G + ++ E + RG L L E ++ I + +A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---- 768
+ ++YL+ + +HRD++++N + +F + DFG+ + + + +++ G
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDI--YETDYYRKGGKGLLP 190
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ +PE T DV+SFGV+++E+
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 85/197 (43%), Gaps = 27/197 (13%)
Query: 106 QYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHG 165
+ LDL SN+LS L +L +LR LYL+ N+L T+P I
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGI------------------ 80
Query: 166 SIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSL 225
L NL L++ N L + +L +L +L L NQ P +L+ L
Sbjct: 81 -----FKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKL 135
Query: 226 TMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYG 285
T +SL N L + L SL L L+ NQL + L+ L+ L L NN L
Sbjct: 136 TYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195
Query: 286 FVPEEIGYLKSLSELEL 302
VPE G SL +L++
Sbjct: 196 -VPE--GAFDSLEKLKM 209
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 436 QYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQE 495
+ LDL +NKLSS K+ L KL L L++N+L F++L +L L ++ N LQ
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQ- 98
Query: 496 EIPPQVCN-MGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELH----GPIPNSTA 550
+P V + + +L +L L N L PR F+ + L+ + + YNEL G T+
Sbjct: 99 ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTS 158
Query: 551 FKDGLMEGNKGLKRVSQEEQSNSMNRLRLLSVLNFD 586
K+ + N+ LKRV + + ++L L L D
Sbjct: 159 LKELRLYNNQ-LKRVPE----GAFDKLTELKTLKLD 189
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 10/170 (5%)
Query: 143 IPPEIGQLSLIDKLALCHNNLHGSIPS-SLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSL 201
IP + +L L +N S+PS + L+ L +LYL N L I +LK+L
Sbjct: 35 IPADTKKLDL-------QSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNL 87
Query: 202 LQLDLSENQFSGSIPLSL-GNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLN 260
L +++N+ ++P+ + L +L + L N L P + +L L+ L L N+L
Sbjct: 88 ETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146
Query: 261 GFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGV 310
L+SL+ L LYNN L L L L+L N L+ V
Sbjct: 147 SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRV 196
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 10/160 (6%)
Query: 429 FGSLTKLQYLDLSTNKLSSSIPKSIGNLLK-LHYLNLSNNQLSHKIPTEFEKLIHLSELD 487
F LTKL+ L L+ NKL + +P I LK L L +++N+L F++L++L+EL
Sbjct: 57 FHRLTKLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELR 115
Query: 488 LSHNILQEEIPPQVCN-MGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNEL----H 542
L N L+ +PP+V + + L L+L +N L F+++ SL + + N+L
Sbjct: 116 LDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174
Query: 543 GPIPNSTAFKDGLMEGNKGLKRVSQEEQSNSMNRLRLLSV 582
G T K ++ N+ LKRV E +S+ +L++L +
Sbjct: 175 GAFDKLTELKTLKLDNNQ-LKRVP-EGAFDSLEKLKMLQL 212
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 426 PLEFGSLTKLQYLDLSTNKLSSSIPKSI-GNLLKLHYLNLSNNQLSHKIPTEFEKLIHLS 484
P F SLTKL YL L N+L S+PK + L L L L NNQL F+KL L
Sbjct: 126 PRVFDSLTKLTYLSLGYNEL-QSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELK 184
Query: 485 ELDLSHNILQEEIPPQVCNMGSLEKLNL 512
L L +N L+ +P SLEKL +
Sbjct: 185 TLKLDNNQLK-RVPEGA--FDSLEKLKM 209
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%)
Query: 429 FGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDL 488
F L L L L N+L S P+ +L KL YL+L N+L F+KL L EL L
Sbjct: 105 FDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRL 164
Query: 489 SHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYN 539
+N L+ + L+ L L +N L F+ + L + + N
Sbjct: 165 YNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 52/132 (39%)
Query: 102 LSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161
L L+ L + N+L L +L L L LD NQL P L+ + L+L +N
Sbjct: 84 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYN 143
Query: 162 NLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGN 221
L L++L L LY N L KL L L L NQ + +
Sbjct: 144 ELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDS 203
Query: 222 LSSLTMMSLFNN 233
L L M+ L N
Sbjct: 204 LEKLKMLQLQEN 215
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 44/100 (44%)
Query: 96 PLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDK 155
P +L+KL YL LG N+L L KL L+ L L NQL +L+ +
Sbjct: 126 PRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKT 185
Query: 156 LALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSII 195
L L +N L + +L L +L L +N + II
Sbjct: 186 LKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNGII 225
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 30/216 (13%)
Query: 607 IGKGGQGSVYKAELPSGD--------IVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK +++D ++E+ +K I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG-------------DDVTAKELGWNRR 704
H+N + G C +++ Y +G+L L + V +++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--PHSSNW 762
++ +A + YL IHRD++++NVL+ N ++DFG+A+ + +
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
T + APE + T + DV+SFGVL++E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EVL 651
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 6 EDWDLVQTLGEGAAGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC 56
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKG 710
K + H N VKF+G G +L EY G L + D+ E R + ++ G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGT 768
V YLH I HRDI +N+LLD +SDFG+A ++ + GT
Sbjct: 117 VV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 769 FGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
Y APE+ E DV+S G+++ ++ G P D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+GKG V + ++ +G A N++ LS DH + E + ++H N V+ H
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR--DHQKLEREARICRLLKHPNIVRLH 76
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
H +L+ + + G L +D+ A+E + + + L + H
Sbjct: 77 DSISEEGHHYLIFDLVTGGELF----EDIVARE--YYSEADASHCIQQILEAVLHCHQMG 130
Query: 726 IIHRDISSKNVLLDSNFE---AHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
++HR++ +N+LL S + ++DFG+A V W FAGT GY +PE+
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 783 TEKYDVYSFGVLVFEVIKGNHP 804
+ D+++ GV+++ ++ G P
Sbjct: 191 GKPVDLWACGVILYILLVGYPP 212
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
DFD IG+G V L D + + +++ + + DE ++ V K + +
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRI----YAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 660 NN-----VKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANA 714
+ V H F V EY++ G L + ++L ++ A
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLA 165
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
L+YLH II+RD+ NVLLDS ++D+G+ K + F GT Y AP
Sbjct: 166 LNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAP 222
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHPRD 806
EI D ++ GVL+FE++ G P D
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELN 67
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVANAL 715
H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
S+ ++HRD+ +N+L+++ ++DFG+A+ G +T T Y APE
Sbjct: 128 SH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 180
Query: 776 IAYTMR-ATEKYDVYSFGVLVFEVI 799
I + + D++S G + E++
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMV 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EVL 651
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 6 EDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIX 56
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKG 710
K + H N VKF+G G +L EY G L + D+ E R + ++ G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGT 768
V YLH I HRDI +N+LLD +SDFG+A ++ + GT
Sbjct: 117 VV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 769 FGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
Y APE+ E DV+S G+++ ++ G P D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELN 60
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVANAL 715
H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
S+ ++HRD+ +N+L+++ ++DFG+A+ G +T T Y APE
Sbjct: 121 SH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 776 IAYTMR-ATEKYDVYSFGVLVFEVI 799
I + + D++S G + E++
Sbjct: 174 ILLGXKYYSTAVDIWSLGCIFAEMV 198
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EVL 651
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 5 EDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC 55
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKG 710
K + H N VKF+G G +L EY G L + D+ E R + ++ G
Sbjct: 56 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 115
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGT 768
V YLH I HRDI +N+LLD +SDFG+A ++ + GT
Sbjct: 116 VV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 168
Query: 769 FGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
Y APE+ E DV+S G+++ ++ G P D
Sbjct: 169 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EVL 651
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 6 EDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC 56
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKG 710
K + H N VKF+G G +L EY G L + D+ E R + ++ G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGT 768
V YLH I HRDI +N+LLD +SDFG+A ++ + GT
Sbjct: 117 VV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 769 FGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
Y APE+ E DV+S G+++ ++ G P D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EVL 651
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 6 EDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC 56
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKG 710
K + H N VKF+G G +L EY G L + D+ E R + ++ G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGT 768
V YLH I HRDI +N+LLD +SDFG+A ++ + GT
Sbjct: 117 VV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 769 FGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
Y APE+ E DV+S G+++ ++ G P D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EVL 651
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 7 EDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC 57
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKG 710
K + H N VKF+G G +L EY G L + D+ E R + ++ G
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGT 768
V YLH I HRDI +N+LLD +SDFG+A ++ + GT
Sbjct: 118 VV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 769 FGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
Y APE+ E DV+S G+++ ++ G P D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EVL 651
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 6 EDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC 56
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKG 710
K + H N VKF+G G +L EY G L + D+ E R + ++ G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGT 768
V YLH I HRDI +N+LLD +SDFG+A ++ + GT
Sbjct: 117 VV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 769 FGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
Y APE+ E DV+S G+++ ++ G P D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EVL 651
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 6 EDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC 56
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKG 710
K + H N VKF+G G +L EY G L + D+ E R + ++ G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGT 768
V YLH I HRDI +N+LLD +SDFG+A ++ + GT
Sbjct: 117 VV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 769 FGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
Y APE+ E DV+S G+++ ++ G P D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EVL 651
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 6 EDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC 56
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKG 710
K + H N VKF+G G +L EY G L + D+ E R + ++ G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGT 768
V YLH I HRDI +N+LLD +SDFG+A ++ + GT
Sbjct: 117 VV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 769 FGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
Y APE+ E DV+S G+++ ++ G P D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EVL 651
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 7 EDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC 57
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKG 710
K + H N VKF+G G +L EY G L + D+ E R + ++ G
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGT 768
V YLH I HRDI +N+LLD +SDFG+A ++ + GT
Sbjct: 118 VV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 769 FGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
Y APE+ E DV+S G+++ ++ G P D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 611 GQGSVYKAELP----SGDIVAVKKFNSQLLS-GNMADHDEFLNEVLALKEIRHRNNVKFH 665
G+GS K +L +G VA+K N ++L+ +M E E+ L+ +RH + +K +
Sbjct: 13 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLY 70
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
+ +V EY I+ D +++ RR + + +A+ Y H
Sbjct: 71 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA--RRF--FQQIISAVEYCHRH---K 123
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE-IAYTMRATE 784
I+HRD+ +N+LLD + ++DFG++ + + T G+ YAAPE I+ + A
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEVISGKLYAGP 182
Query: 785 KYDVYSFGVLVFEVIKGNHPRD 806
+ DV+S GV+++ ++ P D
Sbjct: 183 EVDVWSCGVILYVMLCRRLPFD 204
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 59
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G +T T Y A
Sbjct: 120 CHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 172
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EVL 651
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 6 EDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIX 56
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKG 710
K + H N VKF+G G +L EY G L + D+ E R + ++ G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGT 768
V YLH I HRDI +N+LLD +SDFG+A ++ + GT
Sbjct: 117 VV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 769 FGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
Y APE+ E DV+S G+++ ++ G P D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EVL 651
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 7 EDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIX 57
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKG 710
K + H N VKF+G G +L EY G L + D+ E R + ++ G
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGT 768
V YLH I HRDI +N+LLD +SDFG+A ++ + GT
Sbjct: 118 VV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
Query: 769 FGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
Y APE+ E DV+S G+++ ++ G P D
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 607 IGKGGQGSVYKAELPSGDI-------VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G+G G VY+ + G + VA+K N + +M + EFLNE +KE
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE---AASMRERIEFLNEASVMKEFNCH 82
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKE-------LGWNRRINVIKGVA 712
+ V+ G G + ++ E + RG L L E ++ I + +A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--G 770
+ ++YL+ + +HRD++++N ++ +F + DFG+ + + G
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ +PE T DV+SFGV+++E+
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELN 60
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVANAL 715
H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
S+ ++HRD+ +N+L+++ ++DFG+A+ G +T T Y APE
Sbjct: 121 SH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 776 IAYTMR-ATEKYDVYSFGVLVFEVI 799
I + + D++S G + E++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 611 GQGSVYKAELP----SGDIVAVKKFNSQLLS-GNMADHDEFLNEVLALKEIRHRNNVKFH 665
G+GS K +L +G VA+K N ++L+ +M E E+ L+ +RH + +K +
Sbjct: 17 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLY 74
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
+ +V EY I+ D +++ RR + + +A+ Y H
Sbjct: 75 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA--RRF--FQQIISAVEYCHRH---K 127
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE-IAYTMRATE 784
I+HRD+ +N+LLD + ++DFG++ + + T G+ YAAPE I+ + A
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEVISGKLYAGP 186
Query: 785 KYDVYSFGVLVFEVIKGNHPRD 806
+ DV+S GV+++ ++ P D
Sbjct: 187 EVDVWSCGVILYVMLCRRLPFD 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EVL 651
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 6 EDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC 56
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKG 710
K + H N VKF+G G +L EY G L + D+ E R + ++ G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGT 768
V YLH I HRDI +N+LLD +SDFG+A ++ + GT
Sbjct: 117 VV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 769 FGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
Y APE+ E DV+S G+++ ++ G P D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EVL 651
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 6 EDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC 56
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKG 710
K + H N VKF+G G +L EY G L + D+ E R + ++ G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGT 768
V YLH I HRDI +N+LLD +SDFG+A ++ + GT
Sbjct: 117 VV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 769 FGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
Y APE+ E DV+S G+++ ++ G P D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-------EVL 651
+D+D +G+G G V +AV + + ++ + D ++ E+
Sbjct: 6 EDWDLVQTLGEGAYGEVQ---------LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIC 56
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKG 710
K + H N VKF+G G +L EY G L + D+ E R + ++ G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGT 768
V YLH I HRDI +N+LLD +SDFG+A ++ + GT
Sbjct: 117 VV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 769 FGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
Y APE+ E DV+S G+++ ++ G P D
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELN 60
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVANAL 715
H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
S+ ++HRD+ +N+L+++ ++DFG+A+ G +T T Y APE
Sbjct: 121 SH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 776 IAYTMR-ATEKYDVYSFGVLVFEVI 799
I + + D++S G + E++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELN 59
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVANAL 715
H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
S+ ++HRD+ +N+L+++ ++DFG+A+ G +T T Y APE
Sbjct: 120 SH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 776 IAYTMR-ATEKYDVYSFGVLVFEVI 799
I + + D++S G + E++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 611 GQGSVYKAELP----SGDIVAVKKFNSQLLS-GNMADHDEFLNEVLALKEIRHRNNVKFH 665
G+GS K +L +G VA+K N ++L+ +M E E+ L+ +RH + +K +
Sbjct: 23 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLY 80
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
+ +V EY I+ D +++ RR + + +A+ Y H
Sbjct: 81 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA--RRF--FQQIISAVEYCHRH---K 133
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE-IAYTMRATE 784
I+HRD+ +N+LLD + ++DFG++ + + T G+ YAAPE I+ + A
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEVISGKLYAGP 192
Query: 785 KYDVYSFGVLVFEVIKGNHPRD 806
+ DV+S GV+++ ++ P D
Sbjct: 193 EVDVWSCGVILYVMLCRRLPFD 214
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 40/221 (18%)
Query: 607 IGKGGQGSVYKAELPSGDI--------VAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK S +++D ++E+ +K I +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 92
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG------------------DDVTAKEL 699
H+N + G C +++ EY +G+L L + +++K+L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 700 GWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--P 757
++ VA + YL IHRD++++NVL+ + ++DFG+A+ +
Sbjct: 153 -----VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 758 HSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ T + APE + T + DV+SFGVL++E+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 606 CIGKGGQGSVYKAEL--PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
CIG+G G V++ P +AV + + + ++FL E L +++ H + VK
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVK 75
Query: 664 FHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCL 723
G P +++ E G L L V L I ++ AL+YL
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK-- 130
Query: 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYTMR 781
+HRDI+++NVL+ SN + DFG+++++ S+ G + APE R
Sbjct: 131 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKASKGKLPIKWMAPESINFRR 188
Query: 782 ATEKYDVYSFGVLVFEVI 799
T DV+ FGV ++E++
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 606 CIGKGGQGSVYKA-ELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G G G+V+K +P G+ V +K + SG + + +LA+ + H +
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK--SGRQS-FQAVTDHMLAIGSLDHAH 94
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHH 720
V+ G C G LV +YL GSL + A LG +N +A + YL
Sbjct: 95 IVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYYLEE 151
Query: 721 DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGTFGYAAPEIAY 778
++HR+++++NVLL S + V+DFG+A + P ++E + A E +
Sbjct: 152 H---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 208
Query: 779 TMRATEKYDVYSFGVLVFEVI 799
+ T + DV+S+GV V+E++
Sbjct: 209 FGKYTHQSDVWSYGVTVWELM 229
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 611 GQGSVYKAELP----SGDIVAVKKFNSQLLS-GNMADHDEFLNEVLALKEIRHRNNVKFH 665
G+GS K +L +G VA+K N ++L+ +M E E+ L+ +RH + +K +
Sbjct: 22 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLY 79
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
+ +V EY I+ D +++ RR + + +A+ Y H
Sbjct: 80 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA--RRF--FQQIISAVEYCHRH---K 132
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE-IAYTMRATE 784
I+HRD+ +N+LLD + ++DFG++ + + T G+ YAAPE I+ + A
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEVISGKLYAGP 191
Query: 785 KYDVYSFGVLVFEVIKGNHPRD 806
+ DV+S GV+++ ++ P D
Sbjct: 192 EVDVWSCGVILYVMLCRRLPFD 213
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELN 59
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVANAL 715
H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
S+ ++HRD+ +N+L+++ ++DFG+A+ G +T T Y APE
Sbjct: 120 SH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 776 IAYTMR-ATEKYDVYSFGVLVFEVI 799
I + + D++S G + E++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 40/221 (18%)
Query: 607 IGKGGQGSVYKAELPSGDI--------VAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK S +++D ++E+ +K I +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 92
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG------------------DDVTAKEL 699
H+N + G C +++ EY +G+L L + +++K+L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 700 GWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS 759
++ VA + YL IHRD++++NVL+ + ++DFG+A+ +
Sbjct: 153 -----VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 760 SNWTEFAGTF--GYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
G + APE + T + DV+SFGVL++E+
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 606 CIGKGGQGSVYKAEL--PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
CIG+G G V++ P +AV + + + ++FL E L +++ H + VK
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVK 455
Query: 664 FHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCL 723
G P +++ E G L L V L I ++ AL+YL
Sbjct: 456 LIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK-- 510
Query: 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYTMR 781
+HRDI+++NVL+ SN + DFG+++++ S+ + G + APE R
Sbjct: 511 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 782 ATEKYDVYSFGVLVFEVI 799
T DV+ FGV ++E++
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 40/221 (18%)
Query: 607 IGKGGQGSVYKAELPSGDI--------VAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK S +++D ++E+ +K I +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 77
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG------------------DDVTAKEL 699
H+N + G C +++ EY +G+L L + +++K+L
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 700 GWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--P 757
++ VA + YL IHRD++++NVL+ + ++DFG+A+ +
Sbjct: 138 -----VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 758 HSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ T + APE + T + DV+SFGVL++E+
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE+
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELN 64
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVANAL 715
H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
S+ ++HRD+ +N+L+++ ++DFG+A+ G +T T Y APE
Sbjct: 125 SH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 177
Query: 776 IAYTMR-ATEKYDVYSFGVLVFEVI 799
I + + D++S G + E++
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 40/222 (18%)
Query: 607 IGKGGQGSVYKAELPSGDI--------VAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK S +++D ++E+ +K I +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 133
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG------------------DDVTAKEL 699
H+N + G C +++ EY +G+L L + +++K+L
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 700 GWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--P 757
++ VA + YL IHRD++++NVL+ + ++DFG+A+ +
Sbjct: 194 -----VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 245
Query: 758 HSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ T + APE + T + DV+SFGVL++E+
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 114/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 12 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 124
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG AK +G + G
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 232
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 233 ILEKGERLPQPPICTID 249
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 606 CIGKGGQGSVYK-AELPSGDI----VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G G G+V+K +P G+ V +K + SG + + +LA+ + H +
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK--SGRQS-FQAVTDHMLAIGSLDHAH 76
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHH 720
V+ G C G LV +YL GSL + A LG +N +A + YL
Sbjct: 77 IVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYYLEE 133
Query: 721 DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGTFGYAAPEIAY 778
++HR+++++NVLL S + V+DFG+A + P ++E + A E +
Sbjct: 134 H---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 779 TMRATEKYDVYSFGVLVFEVI 799
+ T + DV+S+GV V+E++
Sbjct: 191 FGKYTHQSDVWSYGVTVWELM 211
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 114/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 17 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 129
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG AK +G + G
Sbjct: 130 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 237
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 238 ILEKGERLPQPPICTID 254
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 35/218 (16%)
Query: 603 EKFC-IGKGGQGSVYKAEL----PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
EK+ + K G+GS KA L G +K+ N +S + +E EV L ++
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK--EREESRREVAVLANMK 81
Query: 658 HRNNVKFH-GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGV----A 712
H N V++ F NG ++V +Y + G L + RIN KGV
Sbjct: 82 HPNIVQYRESFEENG-SLYIVMDYCEGGDLFK---------------RINAQKGVLFQED 125
Query: 713 NALSYLHHDCLP-------SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF 765
L + CL I+HRDI S+N+ L + + DFGIA+ +
Sbjct: 126 QILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC 185
Query: 766 AGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNH 803
GT Y +PEI K D+++ G +++E+ H
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH 223
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+ NL+ L+ LD+ SN++S + + KL L L NQ+ P +G L+ +D+L+L
Sbjct: 169 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 224
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
N L +L +L+NL L L N +S P + L L +L L NQ S P
Sbjct: 225 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-- 278
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYL 278
L L++LT + L N L I PI NLK+L+ L L+ N ++ P + +L+ L+ L+
Sbjct: 279 LAGLTALTNLELNENQLED-ISPI-SNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 334
Query: 279 YNN 281
NN
Sbjct: 335 SNN 337
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 141/307 (45%), Gaps = 52/307 (16%)
Query: 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281
L++LT ++ NN L+ P L NL L + ++ NQ+ P + NL++L L L+NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 282 GLYGFVPEEIGYLKSLSELELCTNLLRGVIP----HSIERVLLNQNNLSGKMYEAFGDHP 337
+ P + L +L+ LEL +N + + S++++ + N ++ + +
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTD--LKPLANLT 173
Query: 338 NLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHI 397
L LD+S+N +IS + L + I + N IS P +G L L L+ N +
Sbjct: 174 TLERLDISSNK-VSDISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL 229
Query: 398 --VGKIPVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGN 455
+G + SLT L LDL+ N++S+ P +
Sbjct: 230 KDIGTL----------------------------ASLTNLTDLDLANNQISNLAP--LSG 259
Query: 456 LLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHN 515
L KL L L NQ+S+ P L L+ L+L+ N L E+I P + N+ +L L L N
Sbjct: 260 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNLTYLTLYFN 315
Query: 516 NLSDFIP 522
N+SD P
Sbjct: 316 NISDISP 322
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+ +L+ L LDL +NQ+S L P + L +L L L NQ+ P + L+ + L L
Sbjct: 235 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 290
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
N L P + NL NL L LY N++S P + L L +L S N+ S S
Sbjct: 291 NENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVSDVS--S 344
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLH 255
L NL+++ +S +N +S P L NL ++ LGL+
Sbjct: 345 LANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 379
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 162/421 (38%), Gaps = 97/421 (23%)
Query: 102 LSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161
++ LQ LG + G + LN L ++ NQL I P L+D L +N
Sbjct: 43 VTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTD-ITPLKNLTKLVD--ILMNN 94
Query: 162 NLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGN 221
N I + L NL+NL L L+ N ++ P + L +L +L+LS N S LS
Sbjct: 95 NQIADI-TPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALS--G 149
Query: 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281
L+SL +S +N ++ P L NL +L L + N+++ + L++L L NN
Sbjct: 150 LTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNN 205
Query: 282 GLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTF 341
+ P +G L +L EL L N L+ + NLT
Sbjct: 206 QISDITP--LGILTNLDELSLNGNQLKDI--------------------GTLASLTNLTD 243
Query: 342 LDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKI 401
LDL+NN N + LS KL L L +N I
Sbjct: 244 LDLANNQIS--------NLAPLSGLT------------------KLTELKLGANQISNIS 277
Query: 402 PVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHY 461
P LT L L+L+ N+L P I NL L Y
Sbjct: 278 P--------------------------LAGLTALTNLELNENQLEDISP--ISNLKNLTY 309
Query: 462 LNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFI 521
L L N +S P L L L S+N + + + N+ ++ L+ HN +SD
Sbjct: 310 LTLYFNNISDISP--VSSLTKLQRLFFSNNKVSDV--SSLANLTNINWLSAGHNQISDLT 365
Query: 522 P 522
P
Sbjct: 366 P 366
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 40/221 (18%)
Query: 607 IGKGGQGSVYKAELPSGDI--------VAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK S +++D ++E+ +K I +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 81
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG------------------DDVTAKEL 699
H+N + G C +++ EY +G+L L + +++K+L
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 700 GWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--P 757
++ VA + YL IHRD++++NVL+ + ++DFG+A+ +
Sbjct: 142 -----VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 193
Query: 758 HSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ T + APE + T + DV+SFGVL++E+
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 40/221 (18%)
Query: 607 IGKGGQGSVYKAELPSGDI--------VAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK S +++D ++E+ +K I +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 92
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG------------------DDVTAKEL 699
H+N + G C +++ EY +G+L L + +++K+L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 700 GWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--P 757
++ VA + YL IHRD++++NVL+ + ++DFG+A+ +
Sbjct: 153 -----VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 758 HSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ T + APE + T + DV+SFGVL++E+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 40/221 (18%)
Query: 607 IGKGGQGSVYKAELPSGDI--------VAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK S +++D ++E+ +K I +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 85
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG------------------DDVTAKEL 699
H+N + G C +++ EY +G+L L + +++K+L
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 700 GWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--P 757
++ VA + YL IHRD++++NVL+ + ++DFG+A+ +
Sbjct: 146 -----VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 197
Query: 758 HSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ T + APE + T + DV+SFGVL++E+
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 14/183 (7%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+ NL+ L+ LD+ SN++S + + KL L L NQ+ P +G L+ +D+L+L
Sbjct: 172 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 227
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
N L +L +L+NL L L N +S P + L L +L L NQ S PL+
Sbjct: 228 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLA 283
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYL 278
L++LT + L N L I PI NLK+L+ L L+ N ++ P + +L+ L+ L+
Sbjct: 284 --GLTALTNLELNENQLE-DISPI-SNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 337
Query: 279 YNN 281
NN
Sbjct: 338 ANN 340
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 139/313 (44%), Gaps = 65/313 (20%)
Query: 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281
L++LT ++ NN L+ P L NL L + ++ NQ+ P + NL++L L L+NN
Sbjct: 66 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 121
Query: 282 GLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDH----- 336
+ P + L +L+ LEL +N + + S L+ +FG+
Sbjct: 122 QITDIDP--LKNLTNLNRLELSSNTISDISALS---------GLTSLQQLSFGNQVTDLK 170
Query: 337 --PNLTFL---DLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLD 391
NLT L D+S+N +IS + L + I + N IS P +G L L
Sbjct: 171 PLANLTTLERLDISSNK-VSDISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELS 226
Query: 392 LSSNHI--VGKIPVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSI 449
L+ N + +G + SLT L LDL+ N++S+
Sbjct: 227 LNGNQLKDIGTL----------------------------ASLTNLTDLDLANNQISNLA 258
Query: 450 PKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEK 509
P + L KL L L NQ+S+ P L L+ L+L+ N L E+I P + N+ +L
Sbjct: 259 P--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNLTY 312
Query: 510 LNLSHNNLSDFIP 522
L L NN+SD P
Sbjct: 313 LTLYFNNISDISP 325
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+ +L+ L LDL +NQ+S L P + L +L L L NQ+ P + L+ + L L
Sbjct: 238 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 293
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
N L P + NL NL L LY N++S P + L L +L + N+ S S
Sbjct: 294 NENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDVS--S 347
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLH 255
L NL+++ +S +N +S P L NL ++ LGL+
Sbjct: 348 LANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 382
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 162/421 (38%), Gaps = 98/421 (23%)
Query: 102 LSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161
++ LQ LG + G + LN L ++ NQL I P L+D L +N
Sbjct: 47 VTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTD-ITPLKNLTKLVD--ILMNN 98
Query: 162 NLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGN 221
N I + L NL+NL L L+ N ++ P + L +L +L+LS N S LS
Sbjct: 99 NQIADI-TPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALS--G 153
Query: 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281
L+SL +S F N ++ P L NL +L L + N+++ + L++L L NN
Sbjct: 154 LTSLQQLS-FGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNN 208
Query: 282 GLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTF 341
+ P +G L +L EL L N L+ + NLT
Sbjct: 209 QISDITP--LGILTNLDELSLNGNQLKDI--------------------GTLASLTNLTD 246
Query: 342 LDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKI 401
LDL+NN N + LS KL L L +N I
Sbjct: 247 LDLANNQIS--------NLAPLSGLT------------------KLTELKLGANQISNIS 280
Query: 402 PVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHY 461
P LT L L+L+ N+L P I NL L Y
Sbjct: 281 P--------------------------LAGLTALTNLELNENQLEDISP--ISNLKNLTY 312
Query: 462 LNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFI 521
L L N +S P L L L ++N + + + N+ ++ L+ HN +SD
Sbjct: 313 LTLYFNNISDISP--VSSLTKLQRLFFANNKVSDV--SSLANLTNINWLSAGHNQISDLT 368
Query: 522 P 522
P
Sbjct: 369 P 369
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 114/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 12 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW 124
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG AK +G + G
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 232
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 233 ILEKGERLPQPPICTID 249
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 40/221 (18%)
Query: 607 IGKGGQGSVYKAELPSGDI--------VAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK S +++D ++E+ +K I +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 92
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG------------------DDVTAKEL 699
H+N + G C +++ EY +G+L L + +++K+L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 700 GWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--P 757
++ VA + YL IHRD++++NVL+ + ++DFG+A+ +
Sbjct: 153 -----VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 758 HSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ T + APE + T + DV+SFGVL++E+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 619 ELPSGDIVAVKKFNSQLL--------------SGNMADHDEFLNEVLALKEIRHRNNVKF 664
EL SG+ VKK Q+ + + A DE L E ++++ + V+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
G C LV E + G L + L + K+ I ++ V+ + YL
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEES--- 130
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG-----YAAPEIAYT 779
+ +HRD++++NVLL + A +SDFG++K + + + A T G + APE
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK--AQTHGKWPVKWYAPECINY 188
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHP 804
+ + K DV+SFGVL++E G P
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+ NL+ L+ LD+ SN++S + + KL L L NQ+ P +G L+ +D+L+L
Sbjct: 168 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 223
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
N L +L +L+NL L L N +S P + L L +L L NQ S P
Sbjct: 224 NGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-- 277
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYL 278
L L++LT + L N L I PI NLK+L+ L L+ N ++ P + +L+ L+ L+
Sbjct: 278 LAGLTALTNLELNENQLE-DISPI-SNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 333
Query: 279 YNN 281
NN
Sbjct: 334 SNN 336
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 138/305 (45%), Gaps = 49/305 (16%)
Query: 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281
L++LT ++ NN L+ P L NL L + ++ NQ+ P + NL++L L L+NN
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 282 GLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYE--AFGDHPNL 339
+ P + L +L+ LEL +N + + S L Q N ++ + + L
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDISALS-GLTSLQQLNFGNQVTDLKPLANLTTL 174
Query: 340 TFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHI-- 397
LD+S+N +IS + L + I + N IS P +G L L L+ N +
Sbjct: 175 ERLDISSNK-VSDISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD 230
Query: 398 VGKIPVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLL 457
+G + SLT L LDL+ N++S+ P + L
Sbjct: 231 IGTL----------------------------ASLTNLTDLDLANNQISNLAP--LSGLT 260
Query: 458 KLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNL 517
KL L L NQ+S+ P L L+ L+L+ N L E+I P + N+ +L L L NN+
Sbjct: 261 KLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNLTYLTLYFNNI 316
Query: 518 SDFIP 522
SD P
Sbjct: 317 SDISP 321
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+ +L+ L LDL +NQ+S L P + L +L L L NQ+ P + L+ + L L
Sbjct: 234 LASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 289
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
N L P + NL NL L LY N++S P + L L +L S N+ S S
Sbjct: 290 NENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVSDVS--S 343
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLH 255
L NL+++ +S +N +S P L NL ++ LGL+
Sbjct: 344 LANLTNINWLSAGHNQISDLTP--LANLTRITQLGLN 378
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 162/421 (38%), Gaps = 98/421 (23%)
Query: 102 LSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161
++ LQ LG + G + LN L ++ NQL I P L+D L +N
Sbjct: 43 VTTLQADRLGIKSIDG-----VEYLNNLTQINFSNNQLTD-ITPLKNLTKLVD--ILMNN 94
Query: 162 NLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGN 221
N I + L NL+NL L L+ N ++ P + L +L +L+LS N S LS
Sbjct: 95 NQIADI-TPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALS--G 149
Query: 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281
L+SL ++ F N ++ P L NL +L L + N+++ + L++L L NN
Sbjct: 150 LTSLQQLN-FGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNN 204
Query: 282 GLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTF 341
+ P +G L +L EL L N L+ + NLT
Sbjct: 205 QISDITP--LGILTNLDELSLNGNQLKDI--------------------GTLASLTNLTD 242
Query: 342 LDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKI 401
LDL+NN N + LS KL L L +N I
Sbjct: 243 LDLANNQIS--------NLAPLSGLT------------------KLTELKLGANQISNIS 276
Query: 402 PVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHY 461
P LT L L+L+ N+L P I NL L Y
Sbjct: 277 P--------------------------LAGLTALTNLELNENQLEDISP--ISNLKNLTY 308
Query: 462 LNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFI 521
L L N +S P L L L S+N + + + N+ ++ L+ HN +SD
Sbjct: 309 LTLYFNNISDISP--VSSLTKLQRLFFSNNKVSDV--SSLANLTNINWLSAGHNQISDLT 364
Query: 522 P 522
P
Sbjct: 365 P 365
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 114/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 10 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 122
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG AK +G + G
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 230
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 231 ILEKGERLPQPPICTID 247
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
AT ++ IG G G+VYKA P SG VA+K + ++ +G + EV L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLRR 59
Query: 656 IR---HRNNVKFHGFCYNGPHS-----FLVCEYLDRGSLARILGDDVTAKELGWNRRINV 707
+ H N V+ C LV E++D+ R D L ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD--LRTYLDKAPPPGLPAETIKDL 117
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
++ L +LH +C I+HRD+ +N+L+ S ++DFG+A+ +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALAPVVV 173
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK 800
T Y APE+ D++S G + E+ +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 206
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 619 ELPSGDIVAVKKFNSQLL--------------SGNMADHDEFLNEVLALKEIRHRNNVKF 664
EL SG+ VKK Q+ + + A DE L E ++++ + V+
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
G C LV E + G L + L + K+ I ++ V+ + YL
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEES--- 136
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG-----YAAPEIAYT 779
+ +HRD++++NVLL + A +SDFG++K + + + A T G + APE
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINY 194
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHP 804
+ + K DV+SFGVL++E G P
Sbjct: 195 YKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 114/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 14 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 72
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW 126
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG AK +G + G
Sbjct: 127 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 234
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 235 ILEKGERLPQPPICTID 251
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI 656
+D + + +GKG G V + +G AVK + + + D + L EV LK++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQL 83
Query: 657 RHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALS 716
H N K + F + + +LV E G L + ++ K +I+ V + ++
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 717 YLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
Y H + I+HRD+ +N+LL+S + + DFG++ S + GT Y A
Sbjct: 141 YXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKXKDKIGTAYYIA 196
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE+ + EK DV+S GV+++ ++ G P
Sbjct: 197 PEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 114/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + +G G G+VYK +P G+ V + +L + E L+E
Sbjct: 12 RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW 124
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG AK +G + G
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 232
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 233 ILEKGERLPQPPICTID 249
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 40/221 (18%)
Query: 607 IGKGGQGSVYKAELPSGDI--------VAVKKFNSQLLSGNMADHDEFLNEVLALKEI-R 657
+G+G G V AE D VAVK S +++D ++E+ +K I +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD---LISEMEMMKMIGK 84
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG------------------DDVTAKEL 699
H+N + G C +++ EY +G+L L + +++K+L
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 700 GWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG--P 757
++ VA + YL IHRD++++NVL+ + ++DFG+A+ +
Sbjct: 145 -----VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 196
Query: 758 HSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ T + APE + T + DV+SFGVL++E+
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 619 ELPSGDIVAVKKFNSQLL--------------SGNMADHDEFLNEVLALKEIRHRNNVKF 664
EL SG+ VKK Q+ + + A DE L E ++++ + V+
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
G C LV E + G L + L + K+ I ++ V+ + YL
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEES--- 144
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG-----YAAPEIAYT 779
+ +HRD++++NVLL + A +SDFG++K + + + A T G + APE
Sbjct: 145 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINY 202
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHP 804
+ + K DV+SFGVL++E G P
Sbjct: 203 YKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IGKG G VY G+ VA++ + + N F EV+A ++ RH N V F G
Sbjct: 41 IGKGRFGQVYHGRW-HGE-VAIRLIDIE--RDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
C + PH ++ +L ++ D ++ N+ + + + + YLH I
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDV--NKTRQIAQEIVKGMGYLH---AKGI 151
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFA-----GTFGYAAPEIAYTMR 781
+H+D+ SKNV D N + ++DFG+ G + E G + APEI +
Sbjct: 152 LHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLS 210
Query: 782 A---------TEKYDVYSFGVLVFEVIKGNHP 804
++ DV++ G + +E+ P
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 21/168 (12%)
Query: 645 EFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL-----ARILGDDVTAKEL 699
+ L EV LK + H N +K + F + + +LV E G L R+ ++V A
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDA--- 138
Query: 700 GWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGIAKFVG 756
+IK V + ++YLH +I+HRD+ +N+LL+S + + DFG++ V
Sbjct: 139 -----AVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSA-VF 189
Query: 757 PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ E GT Y APE+ + EK DV+S GV++F ++ G P
Sbjct: 190 ENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 619 ELPSGDIVAVKKFNSQLL--------------SGNMADHDEFLNEVLALKEIRHRNNVKF 664
EL SG+ VKK Q+ + + A DE L E ++++ + V+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
G C LV E + G L + L + K+ I ++ V+ + YL
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEES--- 146
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG-----YAAPEIAYT 779
+ +HRD++++NVLL + A +SDFG++K + + + A T G + APE
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINY 204
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHP 804
+ + K DV+SFGVL++E G P
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 619 ELPSGDIVAVKKFNSQLL--------------SGNMADHDEFLNEVLALKEIRHRNNVKF 664
EL SG+ VKK Q+ + + A DE L E ++++ + V+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
G C LV E + G L + L + K+ I ++ V+ + YL
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEES--- 146
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG-----YAAPEIAYT 779
+ +HRD++++NVLL + A +SDFG++K + + + A T G + APE
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINY 204
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHP 804
+ + K DV+SFGVL++E G P
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 619 ELPSGDIVAVKKFNSQLL--------------SGNMADHDEFLNEVLALKEIRHRNNVKF 664
EL SG+ VKK Q+ + + A DE L E ++++ + V+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
G C LV E + G L + L + K+ I ++ V+ + YL
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEES--- 130
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG-----YAAPEIAYT 779
+ +HRD++++NVLL + A +SDFG++K + + + A T G + APE
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINY 188
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHP 804
+ + K DV+SFGVL++E G P
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 619 ELPSGDIVAVKKFNSQLL--------------SGNMADHDEFLNEVLALKEIRHRNNVKF 664
EL SG+ VKK Q+ + + A DE L E ++++ + V+
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
G C LV E + G L + L + K+ I ++ V+ + YL
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEES--- 124
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG-----YAAPEIAYT 779
+ +HRD++++NVLL + A +SDFG++K + + + A T G + APE
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINY 182
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHP 804
+ + K DV+SFGVL++E G P
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 61
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E++D+ + +T L + +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 122 CHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 619 ELPSGDIVAVKKFNSQLL--------------SGNMADHDEFLNEVLALKEIRHRNNVKF 664
EL SG+ VKK Q+ + + A DE L E ++++ + V+
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
G C LV E + G L + L + K+ I ++ V+ + YL
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEES--- 126
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG-----YAAPEIAYT 779
+ +HRD++++NVLL + A +SDFG++K + + + A T G + APE
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINY 184
Query: 780 MRATEKYDVYSFGVLVFEVIK-GNHP 804
+ + K DV+SFGVL++E G P
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 114/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + + G G+VYK +P G+ V + +L + E L+E
Sbjct: 17 RILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 129
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 130 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 237
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 238 ILEKGERLPQPPICTID 254
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 28/200 (14%)
Query: 619 ELPSGDIVAVKKFNSQLL--------------SGNMADHDEFLNEVLALKEIRHRNNVKF 664
EL SG+ VKK Q+ + + A DE L E ++++ + V+
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
G C LV E + G L + L + K+ I ++ V+ + YL
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEES--- 489
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG-----YAAPEIAYT 779
+ +HRD++++NVLL + A +SDFG++K + + + A T G + APE
Sbjct: 490 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINY 547
Query: 780 MRATEKYDVYSFGVLVFEVI 799
+ + K DV+SFGVL++E
Sbjct: 548 YKFSSKSDVWSFGVLMWEAF 567
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 29/256 (11%)
Query: 594 IIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEVL 651
I+K T+ F + + G G+VYK +P G+ V + +L + E L+E
Sbjct: 11 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 652 ALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVI 708
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWC 123
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 769 --FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNKI 825
+ A E T + DV+S+GV V+E++ G+ P D +++ I
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISSI 231
Query: 826 LDP--RLPTPSPSVMD 839
L+ RLP P +D
Sbjct: 232 LEKGERLPQPPICTID 247
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 28/200 (14%)
Query: 619 ELPSGDIVAVKKFNSQLL--------------SGNMADHDEFLNEVLALKEIRHRNNVKF 664
EL SG+ VKK Q+ + + A DE L E ++++ + V+
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
G C LV E + G L + L + K+ I ++ V+ + YL
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEES--- 488
Query: 725 SIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG-----YAAPEIAYT 779
+ +HRD++++NVLL + A +SDFG++K + + + A T G + APE
Sbjct: 489 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK--AQTHGKWPVKWYAPECINY 546
Query: 780 MRATEKYDVYSFGVLVFEVI 799
+ + K DV+SFGVL++E
Sbjct: 547 YKFSSKSDVWSFGVLMWEAF 566
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 114/257 (44%), Gaps = 29/257 (11%)
Query: 593 EIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMAD-HDEFLNEV 650
I+K T+ F + + G G+VYK +P G+ V + +L + E L+E
Sbjct: 17 RILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINV 707
+ + + + + G C L+ + + G L R D++ ++ L +N
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNW 129
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
+A ++YL ++HRD++++NVL+ + ++DFG+AK +G + G
Sbjct: 130 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 768 T--FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDXXXXXXXXXXXXXXDVNK 824
+ A E T + DV+S+GV V+E++ G+ P D +++
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD---------GIPASEISS 237
Query: 825 ILDP--RLPTPSPSVMD 839
IL+ RLP P +D
Sbjct: 238 ILEKGERLPQPPICTID 254
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
AT ++ IG G G+VYKA P SG VA+K + ++ +G + EV L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLRR 59
Query: 656 IR---HRNNVKFHGFCYNGPHS-----FLVCEYLDRGSLARILGDDVTAKELGWNRRINV 707
+ H N V+ C LV E++D+ R D L ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD--LRTYLDKAPPPGLPAETIKDL 117
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
++ L +LH +C I+HRD+ +N+L+ S ++DFG+A+ +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALDPVVV 173
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK 800
T Y APE+ D++S G + E+ +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 206
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 611 GQGSVYKAELPS----GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
G+GS K +L + VA+K + QLL + H E+ LK +RH + +K +
Sbjct: 18 GEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDM-HMRVEREISYLKLLRHPHIIKLYD 76
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+V EY G L + V K + + + + A+ Y H I
Sbjct: 77 VITTPTDIVMVIEYAG-GELFDYI---VEKKRMTEDEGRRFFQQIICAIEYCHRH---KI 129
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY-TMRATEK 785
+HRD+ +N+LLD N ++DFG++ + + T G+ YAAPE+ + A +
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEVINGKLYAGPE 188
Query: 786 YDVYSFGVLVFEVIKGNHPRD 806
DV+S G++++ ++ G P D
Sbjct: 189 VDVWSCGIVLYVMLVGRLPFD 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 606 CIGKGGQGSVYKAEL--PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
CIG+G G V++ P +AV + + + ++FL E L +++ H + VK
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVK 72
Query: 664 FHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCL 723
G P +++ E G L L V L I ++ AL+YL
Sbjct: 73 LIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK-- 127
Query: 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYTMR 781
+HRDI+++NVL+ SN + DFG+++++ S+ + G + APE R
Sbjct: 128 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 782 ATEKYDVYSFGVLVFEVI 799
T DV+ FGV ++E++
Sbjct: 186 FTSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 606 CIGKGGQGSVYKAEL--PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
CIG+G G V++ P +AV + + + ++FL E L +++ H + VK
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVK 77
Query: 664 FHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCL 723
G P +++ E G L L V L I ++ AL+YL
Sbjct: 78 LIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK-- 132
Query: 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYTMR 781
+HRDI+++NVL+ SN + DFG+++++ S+ + G + APE R
Sbjct: 133 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 190
Query: 782 ATEKYDVYSFGVLVFEVI 799
T DV+ FGV ++E++
Sbjct: 191 FTSASDVWMFGVCMWEIL 208
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 13/205 (6%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELN 59
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVANAL 715
H N VK + +LV E++ + + +T L + +++G+A
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
S+ ++HRD+ +N+L+++ ++DFG+A+ G +T T Y APE
Sbjct: 120 SH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 776 IAYTMR-ATEKYDVYSFGVLVFEVI 799
I + + D++S G + E++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 606 CIGKGGQGSVYKAELPSG----DIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNN 661
+G G G V+ SG + A+K + + E L+ IR
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 662 -VKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKG-VANALSYLH 719
V H L+ +Y++ G L L + +E + + G + AL +LH
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHL----SQRERFTEHEVQIYVGEIVLALEHLH 176
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK-FVGPHSSNWTEFAGTFGYAAPEIAY 778
II+RDI +N+LLDSN ++DFG++K FV + +F GT Y AP+I
Sbjct: 177 K---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVR 233
Query: 779 TMRA--TEKYDVYSFGVLVFEVIKGNHP 804
+ + D +S GVL++E++ G P
Sbjct: 234 GGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 606 CIGKGGQGSVYKAEL--PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
CIG+G G V++ P +AV + + + ++FL E L +++ H + VK
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVK 75
Query: 664 FHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCL 723
G P +++ E G L L V L I ++ AL+YL
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK-- 130
Query: 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYTMR 781
+HRDI+++NVL+ SN + DFG+++++ S+ + G + APE R
Sbjct: 131 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 782 ATEKYDVYSFGVLVFEVI 799
T DV+ FGV ++E++
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 35/223 (15%)
Query: 606 CIGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G+G G V KA VAVK + D L+E LK++ H
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD---LLSEFNVLKQVNHP 86
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSL------ARILG---------------DDVTAKE 698
+ +K +G C L+ EY GSL +R +G D +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 699 LGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPH 758
L I+ ++ + YL S++HRD++++N+L+ + +SDFG+++ V
Sbjct: 147 LTMGDLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 759 SSNWTEFAGTF--GYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
S G + A E + T + DV+SFGVL++E++
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
AT ++ IG G G+VYKA P SG VA+K + ++ +G + EV L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLRR 59
Query: 656 IR---HRNNVKFHGFCYNGPHS-----FLVCEYLDRGSLARILGDDVTAKELGWNRRINV 707
+ H N V+ C LV E++D+ R D L ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD--LRTYLDKAPPPGLPAETIKDL 117
Query: 708 IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG 767
++ L +LH +C I+HRD+ +N+L+ S ++DFG+A+ +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALFPVVV 173
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK 800
T Y APE+ D++S G + E+ +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 206
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 61
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 122 CHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G VYKA+ ++A K + + + + ++++ E+ L H N VK
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKV---IDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
Y + +++ E+ G++ ++ + + L ++ V K +AL+YLH + I
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATE-- 784
IHRD+ + N+L + + ++DFG++ F GT + APE+ + +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 785 ---KYDVYSFGVLVFEVIKGNHP 804
K DV+S G+ + E+ + P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G VYKA+ ++A K + + + + ++++ E+ L H N VK
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKV---IDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
Y + +++ E+ G++ ++ + + L ++ V K +AL+YLH + I
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATE-- 784
IHRD+ + N+L + + ++DFG++ F GT + APE+ + +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 785 ---KYDVYSFGVLVFEVIKGNHP 804
K DV+S G+ + E+ + P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 31/214 (14%)
Query: 607 IGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNN---- 661
IG+G GSV K PSG I+AVK+ S + D E ++ L + ++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTV------DEKEQKQLLMDLDVVMRSSDCPYI 83
Query: 662 VKFHGFCYNGPHSFLVCEYLDRG------SLARILGDDVTAKELGWNRRINVIKGVANAL 715
V+F+G + ++ E + + +L D + + LG + AL
Sbjct: 84 VQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG-----KITLATVKAL 138
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIA-KFVGPHSSNWTEFAGTFGYAAP 774
++L + IIHRDI N+LLD + + DFGI+ + V S T AG Y AP
Sbjct: 139 NHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV--DSIAKTRDAGCRPYMAP 194
Query: 775 EIAYTMRATEKY----DVYSFGVLVFEVIKGNHP 804
E + + Y DV+S G+ ++E+ G P
Sbjct: 195 ERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 61
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 122 CHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 60
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 121 CHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G VYKA+ ++A K + + + + ++++ E+ L H N VK
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKV---IDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
Y + +++ E+ G++ ++ + + L ++ V K +AL+YLH + I
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 727 IHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATE-- 784
IHRD+ + N+L + + ++DFG++ F GT + APE+ + +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 785 ---KYDVYSFGVLVFEVIKGNHP 804
K DV+S G+ + E+ + P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 59.7 bits (143), Expect = 6e-09, Method: Composition-based stats.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 599 DDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE-I 656
+D+D +G+G G V A + + VAVK + + D E + + + + +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK----RAVDCPENIKKEICINAML 62
Query: 657 RHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKGVANAL 715
H N VKF+G G +L EY G L + D+ E R + ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGTFGYAA 773
YLH I HRDI +N+LLD +SDFG+A ++ + GT Y A
Sbjct: 120 -YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806
PE+ E DV+S G+++ ++ G P D
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 62
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 123 CHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 175
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 33/235 (14%)
Query: 592 EEIIKATDDFDEKFCIGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFL 647
E+++ F +GKG GSV +A+L D VAVK + +++ +D +EFL
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS--SDIEEFL 73
Query: 648 NEVLALKEIRHRNNVKFHGFCYNG------PHSFLVCEYLDRGSLARILGDDVTAKELGW 701
E +KE H + K G P ++ ++ G L L A +G
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL----LASRIGE 129
Query: 702 N-------RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754
N + + +A + YL + IHRD++++N +L + V+DFG+++
Sbjct: 130 NPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRK 186
Query: 755 VGPHSSNWTEFAGTFGYAAPEIAYTMRATEKY----DVYSFGVLVFEVI-KGNHP 804
+ +S ++ +A A Y DV++FGV ++E++ +G P
Sbjct: 187 I--YSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 61
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 122 CHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 89/214 (41%), Gaps = 16/214 (7%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFN-SQLLSGNMADHDEFLNEVLALK 654
AT ++ IG G G+VYKA P SG VA+K G + EV L+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 655 EIR---HRNNVKFHGFCYNGPHS-----FLVCEYLDRGSLARILGDDVTAKELGWNRRIN 706
+ H N V+ C LV E++D+ R D L +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD--LRTYLDKAPPPGLPAETIKD 124
Query: 707 VIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFA 766
+++ L +LH +C I+HRD+ +N+L+ S ++DFG+A+ + T
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALTPVV 180
Query: 767 GTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK 800
T Y APE+ D++S G + E+ +
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 214
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 58
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 119 CHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELN 59
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVANAL 715
H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y APE
Sbjct: 120 SH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 172
Query: 776 IAYTMR-ATEKYDVYSFGVLVFEVI 799
I + + D++S G + E++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 58
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 119 CHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 59
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 120 CHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 58
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 119 CHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
++F + IG+G G VYKA +G++VA+ K +L + + E+ LKE+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI--RLDTETEGVPSTAIREISLLKELN 60
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVANAL 715
H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
S+ ++HRD+ +N+L+++ ++DFG+A+ G +T T Y APE
Sbjct: 121 SH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 776 IAYTMR-ATEKYDVYSFGVLVFEVI 799
I + + D++S G + E++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
++F + IG+G G VYKA +G++VA+ K +L + + E+ LKE+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI--RLDTETEGVPSTAIREISLLKELN 59
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVANAL 715
H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
S+ ++HRD+ +N+L+++ ++DFG+A+ G +T T Y APE
Sbjct: 120 SH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 776 IAYTMR-ATEKYDVYSFGVLVFEVI 799
I + + D++S G + E++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 60
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 121 CHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELN 59
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVANAL 715
H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y APE
Sbjct: 120 SH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 172
Query: 776 IAYTMR-ATEKYDVYSFGVLVFEVI 799
I + + D++S G + E++
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNW 762
R + + L LH + I++RD+ +N+LLD + +SD G+A V P
Sbjct: 287 RAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTI 342
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
GT GY APE+ R T D ++ G L++E+I G P
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKELN 61
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVANAL 715
H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y APE
Sbjct: 122 SH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 776 IAYTMR-ATEKYDVYSFGVLVFEVI 799
I + + D++S G + E++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNW 762
R + + L LH + I++RD+ +N+LLD + +SD G+A V P
Sbjct: 287 RAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTI 342
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
GT GY APE+ R T D ++ G L++E+I G P
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNN 661
+GKG GSV P GD +VAVK QL +F E+ LK +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVK----QLQHSGPDQQRDFQREIQILKALHSDFI 70
Query: 662 VKFHGFCYN--GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH 719
VK+ G Y P LV EYL G L L L +R + + + YL
Sbjct: 71 VKYRGVSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLG 128
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AGTFGYAAP 774
+HRD++++N+L++S ++DFG+AK + P + + F Y AP
Sbjct: 129 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDXXVVREPGQSPIFWY-AP 183
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVI 799
E + + DV+SFGV+++E+
Sbjct: 184 ESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 61
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKG----V 711
+ H N VK + +LV E+L L D + A L + +IK +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMD-----LKDFMDASALT-GIPLPLIKSYLFQL 115
Query: 712 ANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGY 771
L++ H ++HRD+ +N+L+++ ++DFG+A+ G + T Y
Sbjct: 116 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 772 AAPEIAYTMR-ATEKYDVYSFGVLVFEVI 799
APEI + + D++S G + E++
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 60
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 121 CHSH-------RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G G G VY+ ++ PS VAVK + D +FL E L + ++ H+N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKLNHQN 109
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALS 716
V+ G F++ E + G L L + L ++V + +A
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 717 YLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGT----F 769
YL + IHRDI+++N LL A + DFG+A+ + + +++ G
Sbjct: 170 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAMLPV 224
Query: 770 GYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ PE T K D +SFGVL++E+
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 58
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 119 CHSH-------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 171
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 31/223 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLS-GNMADHDEFLN---EVLAL 653
D++ +G G G V A E + VA+K + + + G+ + D LN E+ L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 654 KEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL-ARILGD----DVTAKELGWNRRINVI 708
K++ H +K F ++ ++V E ++ G L +++G+ + T K + +
Sbjct: 76 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL--- 131
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGIAKFVGPHSSNWTEF 765
A+ YLH + IIHRD+ +NVLL S E ++DFG +K +G S T
Sbjct: 132 -----AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-L 182
Query: 766 AGTFGYAAPEIAYTMRATEKY----DVYSFGVLVFEVIKGNHP 804
GT Y APE+ ++ T Y D +S GV++F + G P
Sbjct: 183 CGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 59
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + + +T L + +++G+A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 120 CHSH-------RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 61
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + +T L + +++G+A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 122 CHSH-------RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 58
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKG----V 711
+ H N VK + +LV E+L + L D + A L + +IK +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKDFMDASALT-GIPLPLIKSYLFQL 112
Query: 712 ANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGY 771
L++ H ++HRD+ +N+L+++ ++DFG+A+ G + T Y
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 772 AAPEIAYTMR-ATEKYDVYSFGVLVFEVI 799
APEI + + D++S G + E++
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G G G VY+ ++ PS VAVK + D +FL E L + ++ H+N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKLNHQN 95
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALS 716
V+ G F++ E + G L L + L ++V + +A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 717 YLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGT----F 769
YL + IHRDI+++N LL A + DFG+A+ + + +++ G
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAMLPV 210
Query: 770 GYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ PE T K D +SFGVL++E+
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 31/223 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLS-GNMADHDEFLN---EVLAL 653
D++ +G G G V A E + VA+K + + + G+ + D LN E+ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 654 KEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL-ARILGD----DVTAKELGWNRRINVI 708
K++ H +K F ++ ++V E ++ G L +++G+ + T K + +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL--- 125
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGIAKFVGPHSSNWTEF 765
A+ YLH + IIHRD+ +NVLL S E ++DFG +K +G S T
Sbjct: 126 -----AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-L 176
Query: 766 AGTFGYAAPEIAYTMRATEKY----DVYSFGVLVFEVIKGNHP 804
GT Y APE+ ++ T Y D +S GV++F + G P
Sbjct: 177 CGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 607 IGKGGQGSVYKA---ELPSGDI---VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G+G G VY+ ++ G+ VAVK N S ++ + EFLNE +K +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 80
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNR-------RINVIKGVAN 713
V+ G G + +V E + G L L E R I + +A+
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT----F 769
++YL+ +HRD++++N ++ +F + DFG+ + + + +++ G
Sbjct: 141 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--YETDYYRKGGKGLLPV 195
Query: 770 GYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ APE T D++SFGV+++E+
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 31/223 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLS-GNMADHDEFLN---EVLAL 653
D++ +G G G V A E + VA+K + + + G+ + D LN E+ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 654 KEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL-ARILGD----DVTAKELGWNRRINVI 708
K++ H +K F ++ ++V E ++ G L +++G+ + T K + +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL--- 125
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGIAKFVGPHSSNWTEF 765
A+ YLH + IIHRD+ +NVLL S E ++DFG +K +G S T
Sbjct: 126 -----AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-L 176
Query: 766 AGTFGYAAPEIAYTMRATEKY----DVYSFGVLVFEVIKGNHP 804
GT Y APE+ ++ T Y D +S GV++F + G P
Sbjct: 177 CGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDE--FLNEVLALKEIRH 658
+G G G VY+ ++ PS VAVK L ++ DE FL E L + + H
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 109
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANA 714
+N V+ G F++ E + G L L + L ++V + +A
Sbjct: 110 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 169
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGT--- 768
YL + IHRDI+++N LL A + DFG+A+ + + +++ G
Sbjct: 170 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 224
Query: 769 -FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ PE T K D +SFGVL++E+
Sbjct: 225 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 59
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRR--INVIKGVAN 713
+ H N VK + +LV E+L + +T L + +++G+A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
S+ ++HRD+ +N+L+++ ++DFG+A+ G + T Y A
Sbjct: 120 CHSH-------RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 774 PEIAYTMR-ATEKYDVYSFGVLVFEVI 799
PEI + + D++S G + E++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 599 DDFDEKFCIGKGGQGSVY-KAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D F K +G G G V+ E SG +K N M ++ E+ LK +
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPM---EQIEAEIEVLKSLD 78
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSL-ARILGDDVTAKELGWNRRINVIKGVANALS 716
H N +K + + ++V E + G L RI+ K L ++K + NAL+
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 717 YLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFV--GPHSSNWTEFAGTFGY 771
Y H ++H+D+ +N+L + + DFG+A+ HS+N AGT Y
Sbjct: 139 YFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA---AGTALY 192
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
APE+ + T K D++S GV+++ ++ G P
Sbjct: 193 MAPEV-FKRDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 606 CIGKGGQGSVYKAEL--PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
CIG+G G V++ P +AV + + + ++FL E L +++ H + VK
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVK 455
Query: 664 FHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCL 723
G P +++ E G L L V L I ++ AL+YL
Sbjct: 456 LIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK-- 510
Query: 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYTMR 781
+HRDI+++NVL+ + + DFG+++++ S+ + G + APE R
Sbjct: 511 -RFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 782 ATEKYDVYSFGVLVFEVI 799
T DV+ FGV ++E++
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 35/223 (15%)
Query: 606 CIGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G+G G V KA VAVK + D L+E LK++ H
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD---LLSEFNVLKQVNHP 86
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSL------ARILG---------------DDVTAKE 698
+ +K +G C L+ EY GSL +R +G D +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 699 LGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPH 758
L I+ ++ + YL ++HRD++++N+L+ + +SDFG+++ V
Sbjct: 147 LTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 759 SSNWTEFAGTF--GYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
S G + A E + T + DV+SFGVL++E++
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 31/223 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLS-GNMADHDEFLN---EVLAL 653
D++ +G G G V A E + VA+K + + + G+ + D LN E+ L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 654 KEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL-ARILGD----DVTAKELGWNRRINVI 708
K++ H +K F ++ ++V E ++ G L +++G+ + T K + +
Sbjct: 69 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL--- 124
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGIAKFVGPHSSNWTEF 765
A+ YLH + IIHRD+ +NVLL S E ++DFG +K +G S T
Sbjct: 125 -----AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-L 175
Query: 766 AGTFGYAAPEIAYTMRATEKY----DVYSFGVLVFEVIKGNHP 804
GT Y APE+ ++ T Y D +S GV++F + G P
Sbjct: 176 CGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 25/209 (11%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G G G VY+ ++ PS VAVK + D +FL E L + + H+N
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQN 86
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALS 716
V+ G F++ E + G L L + L ++V + +A
Sbjct: 87 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 146
Query: 717 YLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGT----F 769
YL + IHRDI+++N LL A + DFG+A+ + + +++ G
Sbjct: 147 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAMLPV 201
Query: 770 GYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ PE T K D +SFGVL++E+
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE 655
+ ++F + IG+G G VYKA +G++VA+KK +L + + E+ LKE
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI--RLDTETEGVPSTAIREISLLKE 60
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKG----V 711
+ H N VK + +LV E+L L D + A L + +IK +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSMD-----LKDFMDASALT-GIPLPLIKSYLFQL 114
Query: 712 ANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGY 771
L++ H ++HRD+ +N+L+++ ++DFG+A+ G + T Y
Sbjct: 115 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 772 AAPEIAYTMR-ATEKYDVYSFGVLVFEVI 799
APEI + + D++S G + E++
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 607 IGKGGQGSVYKA---ELPSGDI---VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G+G G VY+ ++ G+ VAVK N S ++ + EFLNE +K +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNR-------RINVIKGVAN 713
V+ G G + +V E + G L L E R I + +A+
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT----F 769
++YL+ +HRD++++N ++ +F + DFG+ + + + +++ G
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--YETDYYRKGGKGLLPV 196
Query: 770 GYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ APE T D++SFGV+++E+
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 31/223 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLS-GNMADHDEFLN---EVLAL 653
D++ +G G G V A E + VA+K + + + G+ + D LN E+ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 654 KEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL-ARILGD----DVTAKELGWNRRINVI 708
K++ H +K F ++ ++V E ++ G L +++G+ + T K + +
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL--- 125
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGIAKFVGPHSSNWTEF 765
A+ YLH + IIHRD+ +NVLL S E ++DFG +K +G S T
Sbjct: 126 -----AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-L 176
Query: 766 AGTFGYAAPEIAYTMRATEKY----DVYSFGVLVFEVIKGNHP 804
GT Y APE+ ++ T Y D +S GV++F + G P
Sbjct: 177 CGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 33/228 (14%)
Query: 595 IKATDDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEV-LA 652
+KA DD + +G+G G V K +PSG I+AVK+ + + N + L ++ ++
Sbjct: 48 VKA-DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV---NSQEQKRLLMDLDIS 103
Query: 653 LKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARIL------GDDVTAKELGWNRRIN 706
++ + V F+G + ++ E +D SL + G + LG
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILG-----K 157
Query: 707 VIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFA 766
+ + AL +LH S+IHRD+ NVL+++ + + DFGI+ ++ S T A
Sbjct: 158 IAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDA 214
Query: 767 GTFGYAAPE--------IAYTMRATEKYDVYSFGVLVFEVIKGNHPRD 806
G Y APE Y++++ D++S G+ + E+ P D
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKS----DIWSLGITMIELAILRFPYD 258
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 25/209 (11%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G G G VY+ ++ PS VAVK + D +FL E L + + H+N
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQN 94
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALS 716
V+ G F++ E + G L L + L ++V + +A
Sbjct: 95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 717 YLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGT----F 769
YL + IHRDI+++N LL A + DFG+A+ + + +++ G
Sbjct: 155 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAMLPV 209
Query: 770 GYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ PE T K D +SFGVL++E+
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 25/209 (11%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G G G VY+ ++ PS VAVK + D +FL E L + + H+N
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQN 94
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALS 716
V+ G F++ E + G L L + L ++V + +A
Sbjct: 95 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 717 YLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGT----F 769
YL + IHRDI+++N LL A + DFG+A+ + + +++ G
Sbjct: 155 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAMLPV 209
Query: 770 GYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ PE T K D +SFGVL++E+
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 29/211 (13%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDE--FLNEVLALKEIRH 658
+G G G VY+ ++ PS VAVK L ++ DE FL E L + + H
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 133
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANA 714
+N V+ G F++ E + G L L + L ++V + +A
Sbjct: 134 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGT--- 768
YL + IHRDI+++N LL A + DFG+A+ + + + + G
Sbjct: 194 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRAGYYRKGGCAML 248
Query: 769 -FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ PE T K D +SFGVL++E+
Sbjct: 249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF--QNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
++V E +D +L++++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI-----QMELDHERMSYLLYQMLVGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIKG 801
M E D++S GV++ E+IKG
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDE--FLNEVLALKEIRH 658
+G G G VY+ ++ PS VAVK L ++ DE FL E L + + H
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 99
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANA 714
+N V+ G F++ E + G L L + L ++V + +A
Sbjct: 100 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 159
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGT--- 768
YL + IHRDI+++N LL A + DFG+A+ + + +++ G
Sbjct: 160 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 214
Query: 769 -FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ PE T K D +SFGVL++E+
Sbjct: 215 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNN 661
+GKG GSV P GD +VAVK QL +F E+ LK +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVK----QLQHSGPDQQRDFQREIQILKALHSDFI 73
Query: 662 VKFHGFCYN-GPHSF-LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH 719
VK+ G Y G S LV EYL G L L L +R + + + YL
Sbjct: 74 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLG 131
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AGTFGYAAP 774
+HRD++++N+L++S ++DFG+AK + P ++ + F Y AP
Sbjct: 132 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWY-AP 186
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVI 799
E + + DV+SFGV+++E+
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDE--FLNEVLALKEIRH 658
+G G G VY+ ++ PS VAVK L ++ DE FL E L + + H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 107
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANA 714
+N V+ G F++ E + G L L + L ++V + +A
Sbjct: 108 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGT--- 768
YL + IHRDI+++N LL A + DFG+A+ + + +++ G
Sbjct: 168 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 222
Query: 769 -FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ PE T K D +SFGVL++E+
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNN 661
+GKG GSV P GD +VAVK QL +F E+ LK +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVK----QLQHSGPDQQRDFQREIQILKALHSDFI 86
Query: 662 VKFHGFCYN-GPHSF-LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH 719
VK+ G Y G S LV EYL G L L L +R + + + YL
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLG 144
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AGTFGYAAP 774
+HRD++++N+L++S ++DFG+AK + P ++ + F Y AP
Sbjct: 145 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWY-AP 199
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVI 799
E + + DV+SFGV+++E+
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNN 661
+GKG GSV P GD +VAVK QL +F E+ LK +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVK----QLQHSGPDQQRDFQREIQILKALHSDFI 74
Query: 662 VKFHGFCYN-GPHSF-LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH 719
VK+ G Y G S LV EYL G L L L +R + + + YL
Sbjct: 75 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLG 132
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF-----AGTFGYAAP 774
+HRD++++N+L++S ++DFG+AK + P ++ + F Y AP
Sbjct: 133 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWY-AP 187
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVI 799
E + + DV+SFGV+++E+
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLAL-KEI 656
D+ ++ +GKG G VY S + +A+K+ + + + + L+E +AL K +
Sbjct: 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER-----DSRYSQPLHEEIALHKHL 76
Query: 657 RHRNNVKFHG-FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+H+N V++ G F NG + E + GSL+ +L + K + L
Sbjct: 77 KHKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 135
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
YLH + I+HRDI NVL+++ +SDFG +K + + F GT Y AP
Sbjct: 136 KYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAP 192
Query: 775 EI------AYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EI Y A D++S G + E+ G P
Sbjct: 193 EIIDKGPRGYGKAA----DIWSLGCTIIEMATGKPP 224
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 35/223 (15%)
Query: 606 CIGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR 659
+G+G G V KA VAVK + D L+E LK++ H
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD---LLSEFNVLKQVNHP 86
Query: 660 NNVKFHGFCYNGPHSFLVCEYLDRGSL------ARILG---------------DDVTAKE 698
+ +K +G C L+ EY GSL +R +G D +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 699 LGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPH 758
L I+ ++ + YL ++HRD++++N+L+ + +SDFG+++ V
Sbjct: 147 LTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 759 SSNWTEFAGTF--GYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
S G + A E + T + DV+SFGVL++E++
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPF--QNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
++V E +D +L++++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI-----QMELDHERMSYLLYQMLVGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIKG 801
M E D++S GV++ E+IKG
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 25/209 (11%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G G G VY+ ++ PS VAVK + D +FL E L + + H+N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQN 95
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALS 716
V+ G F++ E + G L L + L ++V + +A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 717 YLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGT----F 769
YL + IHRDI+++N LL A + DFG+A+ + + +++ G
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAMLPV 210
Query: 770 GYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ PE T K D +SFGVL++E+
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDE--FLNEVLALKEIRH 658
+G G G VY+ ++ PS VAVK L ++ DE FL E L + + H
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 119
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANA 714
+N V+ G F++ E + G L L + L ++V + +A
Sbjct: 120 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 179
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGT--- 768
YL + IHRDI+++N LL A + DFG+A+ + + +++ G
Sbjct: 180 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 234
Query: 769 -FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ PE T K D +SFGVL++E+
Sbjct: 235 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLAL-KEI 656
D+ ++ +GKG G VY S + +A+K+ + + + + L+E +AL K +
Sbjct: 8 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER-----DSRYSQPLHEEIALHKHL 62
Query: 657 RHRNNVKFHG-FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
+H+N V++ G F NG + E + GSL+ +L + K + L
Sbjct: 63 KHKNIVQYLGSFSENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 121
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
YLH + I+HRDI NVL+++ +SDFG +K + + F GT Y AP
Sbjct: 122 KYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAP 178
Query: 775 EI------AYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EI Y A D++S G + E+ G P
Sbjct: 179 EIIDKGPRGYGKAA----DIWSLGCTIIEMATGKPP 210
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G G G VY+ ++ PS VAVK + D +FL E L + + H+N
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQN 112
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALS 716
V+ G F++ E + G L L + L ++V + +A
Sbjct: 113 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 172
Query: 717 YLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGT----F 769
YL + IHRDI+++N LL A + DFG+A+ + + + + G
Sbjct: 173 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRAGYYRKGGCAMLPV 227
Query: 770 GYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ PE T K D +SFGVL++E+
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Query: 607 IGKGGQGSVYKAE-LPSGDIVAVKKF---NSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V+K +G IVA+KKF + +A L E+ LK+++H N V
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIA-----LREIRMLKQLKHPNLV 65
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH-HD 721
LV EY D L + D + + + ++ A+++ H H+
Sbjct: 66 NLLEVFRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY-TM 780
C IHRD+ +N+L+ + + DFG A+ + S + + T Y +PE+
Sbjct: 123 C----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 781 RATEKYDVYSFGVLVFEVIKG 801
+ DV++ G + E++ G
Sbjct: 179 QYGPPVDVWAIGCVFAELLSG 199
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 29/212 (13%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDE--FLNEVLALKEIRH 658
+G G G VY+ ++ PS VAVK L ++ DE FL E L + + H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVYSEQDELDFLMEALIISKFNH 107
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANA 714
+N V+ G F++ E + G L L + L ++V + +A
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGT--- 768
YL + IHRDI+++N LL A + DFG+A+ + + +++ G
Sbjct: 168 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRASYYRKGGCAML 222
Query: 769 -FGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ PE T K D +SFGVL++E+
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDE--FLNEVLALKEIRH 658
+G G G VY+ ++ PS VAVK L ++ DE FL E L + + H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNH 93
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANA 714
+N V+ G F++ E + G L L + L ++V + +A
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGT--- 768
YL + IHRDI+++N LL A + DFG+A+ + + +++ G
Sbjct: 154 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDI--YRASYYRKGGCAML 208
Query: 769 -FGYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ PE T K D +SFGVL++E+
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 20/213 (9%)
Query: 607 IGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
+G+G GSV + L D VAVK +L + + + +EFL+E +K+ H N +
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTM--KLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 663 KFHGFCYNG-----PHSFLVCEYLDRGSLARIL---GDDVTAKELGWNRRINVIKGVANA 714
+ G C P ++ ++ G L L + K + + + +A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWTEFAGTFGYA 772
+ YL + + +HRD++++N +L + V+DFG++K + G + +
Sbjct: 160 MEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEV-IKGNHP 804
A E T K DV++FGV ++E+ +G P
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 43/220 (19%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IGKG G V+ + G+ VAVK F + + E VL +RH N + F
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTE-EASWFRETEIYQTVL----MRHENILGFIA 98
Query: 667 FCYNGPHS----FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
G S +L+ +Y + GSL D + + L + + + L +LH +
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLY----DYLKSTTLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 723 L-----PSIIHRDISSKNVLLDSNFEAHVSDFGIA-KFVGPHSSNWTEF-----AGTFGY 771
P+I HRD+ SKN+L+ N ++D G+A KF+ +N + GT Y
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS--DTNEVDIPPNTRVGTKRY 212
Query: 772 AAPEI-----------AYTMRATEKYDVYSFGVLVFEVIK 800
PE+ +Y M D+YSFG++++EV +
Sbjct: 213 MPPEVLDESLNRNHFQSYIMA-----DMYSFGLILWEVAR 247
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 99/240 (41%), Gaps = 51/240 (21%)
Query: 595 IKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDE-----FLNE 649
++ DF+E +G+G G V KA +S+ + H E L+E
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKAR---------NALDSRYYAIKKIRHTEEKLSTILSE 52
Query: 650 VLALKEIRHRNNVKFHGFC-----YNGPHS--------FLVCEYLDRGSLARILGDDVTA 696
V L + H+ V+++ + P + F+ EY + R L D + +
Sbjct: 53 VXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCEN----RTLYDLIHS 108
Query: 697 KELGWNRR--INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754
+ L R + + + ALSY+H IIHR++ N+ +D + + DFG+AK
Sbjct: 109 ENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKN 165
Query: 755 VG-------------PHSS-NWTEFAGTFGYAAPEIAY-TMRATEKYDVYSFGVLVFEVI 799
V P SS N T GT Y A E+ T EK D YS G++ FE I
Sbjct: 166 VHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 607 IGKGGQGSVYKA---ELPSGDI---VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G+G G VY+ ++ G+ VAVK N S ++ + EFLNE +K +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNR-------RINVIKGVAN 713
V+ G G + +V E + G L L E R I + +A+
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GY 771
++YL+ +HRD++++N ++ +F + DFG+ + + G +
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEV 798
APE T D++SFGV+++E+
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 29/237 (12%)
Query: 584 NFDGKIMHEEIIKATDDFDEKFCIGKG-GQGSVYKAELPSGD--IVAVKKFNSQLLSGNM 640
N+ I + +K D + + I + QG K L D A+KK+ LL
Sbjct: 12 NYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKR 71
Query: 641 -------------ADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLA 687
+ +D+F NE+ + +I++ + G N +++ EY++ S+
Sbjct: 72 DFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSIL 131
Query: 688 R------ILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSN 741
+ +L + T + +IK V N+ SY+H++ +I HRD+ N+L+D N
Sbjct: 132 KFDEYFFVLDKNYTC-FIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKN 188
Query: 742 FEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATE--KYDVYSFGVLVF 796
+SDFG ++++ + GT+ + PE + K D++S G+ ++
Sbjct: 189 GRVKLSDFGESEYMVDKKIKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICLY 243
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 607 IGKGGQGSVYKA---ELPSGDI---VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G+G G VY+ ++ G+ VAVK N S ++ + EFLNE +K +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 78
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNR-------RINVIKGVAN 713
V+ G G + +V E + G L L E R I + +A+
Sbjct: 79 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GY 771
++YL+ +HRD++++N ++ +F + DFG+ + + G +
Sbjct: 139 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEV 798
APE T D++SFGV+++E+
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 36/221 (16%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-HRNNVKF 664
+GKG G V+K+ + +G++VAVKK N D E++ L E+ H N V
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAF--QNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 665 HGFCY--NGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
N +LV +Y++ A I + + + V+ + + YLH
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQY-----VVYQLIKVIKYLHSGG 129
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAK-FVG--------PHSSN------------ 761
L +HRD+ N+LL++ V+DFG+++ FV P S N
Sbjct: 130 L---LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 762 WTEFAGTFGYAAPEIAY-TMRATEKYDVYSFGVLVFEVIKG 801
T++ T Y APEI + + T+ D++S G ++ E++ G
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 607 IGKGGQGSVYKA---ELPSGDI---VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G+G G VY+ ++ G+ VAVK N S ++ + EFLNE +K +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNR-------RINVIKGVAN 713
V+ G G + +V E + G L L E R I + +A+
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GY 771
++YL+ +HRD++++N ++ +F + DFG+ + + G +
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEV 798
APE T D++SFGV+++E+
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 33/249 (13%)
Query: 573 SMNRLRLLSVLNFDGKIMHEEIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKF 631
S N++ + L D + ++ + ++ D++ +G G G V A E + VA++
Sbjct: 125 SRNKVFVFFDLTVDDQSVYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRII 182
Query: 632 NSQLLS-GNMADHDEFLN---EVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL- 686
+ + + G+ + D LN E+ LK++ H +K F ++ ++V E ++ G L
Sbjct: 183 SKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELF 241
Query: 687 ARILGD----DVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF 742
+++G+ + T K + + A+ YLH + IIHRD+ +NVLL S
Sbjct: 242 DKVVGNKRLKEATCKLYFYQMLL--------AVQYLHEN---GIIHRDLKPENVLLSSQE 290
Query: 743 E---AHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKY----DVYSFGVLV 795
E ++DFG +K +G S T GT Y APE+ ++ T Y D +S GV++
Sbjct: 291 EDCLIKITDFGHSKILGETSLMRT-LCGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVIL 348
Query: 796 FEVIKGNHP 804
F + G P
Sbjct: 349 FICLSGYPP 357
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 607 IGKGGQGSVYKA---ELPSGDI---VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G+G G VY+ ++ G+ VAVK N S ++ + EFLNE +K +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNR-------RINVIKGVAN 713
V+ G G + +V E + G L L E R I + +A+
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT----F 769
++YL+ +HRD++++N ++ +F + DFG+ + + + + + G
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--YETAYYRKGGKGLLPV 196
Query: 770 GYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ APE T D++SFGV+++E+
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 599 DDFDEKFCIGKGGQ-GSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
+DF E IG+ G G VYKA+ ++A K + + + + ++++ E+ L
Sbjct: 11 EDFWE--IIGELGDFGKVYKAQNKETSVLAAAKV---IDTKSEEELEDYMVEIDILASCD 65
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
H N VK Y + +++ E+ G++ ++ + + L ++ V K +AL+Y
Sbjct: 66 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNY 123
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGI-AKFVGPHSSNWTEFAGTFGYAAPEI 776
LH + IIHRD+ + N+L + + ++DFG+ AK F GT + APE+
Sbjct: 124 LHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEV 180
Query: 777 AYTMRATE-----KYDVYSFGVLVFEVIKGNHP 804
+ + K DV+S G+ + E+ + P
Sbjct: 181 VMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 641 ADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELG 700
AD +E + E + ++ + V+ G C LV E G L + L +E+
Sbjct: 52 ADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIP 108
Query: 701 WNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSS 760
+ ++ V+ + YL + +HRD++++NVLL + A +SDFG++K +G S
Sbjct: 109 VSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165
Query: 761 NWT-EFAGTF--GYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHP 804
+T AG + + APE + + + DV+S+GV ++E + G P
Sbjct: 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 33/228 (14%)
Query: 595 IKATDDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEV-LA 652
+KA DD + +G+G G V K +PSG I+AVK+ + + N + L ++ ++
Sbjct: 4 VKA-DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV---NSQEQKRLLMDLDIS 59
Query: 653 LKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARIL------GDDVTAKELGWNRRIN 706
++ + V F+G + ++ E +D SL + G + LG
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILG-----K 113
Query: 707 VIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFA 766
+ + AL +LH S+IHRD+ NVL+++ + + DFGI+ ++ + + A
Sbjct: 114 IAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-A 170
Query: 767 GTFGYAAPE--------IAYTMRATEKYDVYSFGVLVFEVIKGNHPRD 806
G Y APE Y++++ D++S G+ + E+ P D
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKS----DIWSLGITMIELAILRFPYD 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSK 734
+ V EY++ G L + KE + + ++ L +LH II+RD+
Sbjct: 96 YFVMEYVNGGDLMYHIQQVGKFKE---PQAVFYAAEISIGLFFLHKR---GIIYRDLKLD 149
Query: 735 NVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVL 794
NV+LDS ++DFG+ K EF GT Y APEI + D +++GVL
Sbjct: 150 NVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVL 209
Query: 795 VFEVIKGNHPRD 806
++E++ G P D
Sbjct: 210 LYEMLAGQPPFD 221
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 607 IGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G G VYKA+ +G + A K ++ + + ++++ E+ L H VK
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHPYIVKLL 74
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNR-----RINVI-KGVANALSYLH 719
G Y+ +++ E+ G++ I+ L +R +I V+ + + AL++LH
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAVDAIM--------LELDRGLTEPQIQVVCRQMLEALNFLH 126
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY- 778
IIHRD+ + NVL+ + ++DFG++ F GT + APE+
Sbjct: 127 SK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 779 -TMRATE---KYDVYSFGVLVFEVIKGNHP 804
TM+ T K D++S G+ + E+ + P
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 33/249 (13%)
Query: 573 SMNRLRLLSVLNFDGKIMHEEIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKF 631
S N++ + L D + ++ + ++ D++ +G G G V A E + VA++
Sbjct: 111 SRNKVFVFFDLTVDDQSVYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRII 168
Query: 632 NSQLLS-GNMADHDEFLN---EVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL- 686
+ + + G+ + D LN E+ LK++ H +K F ++ ++V E ++ G L
Sbjct: 169 SKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELF 227
Query: 687 ARILGD----DVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF 742
+++G+ + T K + + A+ YLH + IIHRD+ +NVLL S
Sbjct: 228 DKVVGNKRLKEATCKLYFYQMLL--------AVQYLHEN---GIIHRDLKPENVLLSSQE 276
Query: 743 E---AHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKY----DVYSFGVLV 795
E ++DFG +K +G S T GT Y APE+ ++ T Y D +S GV++
Sbjct: 277 EDCLIKITDFGHSKILGETSLMRT-LCGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVIL 334
Query: 796 FEVIKGNHP 804
F + G P
Sbjct: 335 FICLSGYPP 343
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMA--DHDEFLNEVLALKEIRHRNNVK 663
+G G G+VYK +P G+ V + ++L N + + E L+E + + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIP-VAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 664 FHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCL 723
G C LV + + G L + ++ LG +N +A +SYL
Sbjct: 84 LLGICLTSTVQ-LVTQLMPYGCLLDHVREN--RGRLGSQDLLNWCMQIAKGMSYLED--- 137
Query: 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT--FGYAAPEIAYTMR 781
++HRD++++NVL+ S ++DFG+A+ + + + G + A E R
Sbjct: 138 VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRR 197
Query: 782 ATEKYDVYSFGVLVFEVIK-GNHPRD 806
T + DV+S+GV V+E++ G P D
Sbjct: 198 FTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV--- 662
+G G GSV A + SG+ VA+KK + S A E+L LK ++H N +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRA--YRELLLLKHMQHENVIGLL 107
Query: 663 ----------KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVA 712
F+ F +LV ++ + L +I+G + + +++ + ++ +
Sbjct: 108 DVFTPASSLRNFYDF-------YLVMPFM-QTDLQKIMGMEFSEEKIQY-----LVYQML 154
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
L Y+H ++HRD+ N+ ++ + E + DFG+A+ + T + T Y
Sbjct: 155 KGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHA---DAEMTGYVVTRWYR 208
Query: 773 APEIAYT-MRATEKYDVYSFGVLVFEVIKGN 802
APE+ + M + D++S G ++ E++ G
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 114
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 115 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 173 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 223
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 224 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 100
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 101 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 159 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 209
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 210 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 100
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 101 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 159 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 209
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 210 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 99
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 100 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 158 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 208
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 209 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 114
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 115 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 173 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 223
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 224 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 99
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 100 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 158 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 208
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 209 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 100
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 101 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 159 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 209
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 210 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 35/216 (16%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IGKG G V++ + G+ VAVK F+S+ + + + +L RH N + F
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVML-----RHENILGFIA 103
Query: 667 F--CYNGPHS--FLVCEYLDRGSLARILGD-DVTAKELGWNRRINVIKGVANALSYLHHD 721
NG + +LV +Y + GSL L VT + + I + A+ L++LH +
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 158
Query: 722 CL-----PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWT------EFAGTFG 770
+ P+I HRD+ SKN+L+ N ++D G+A V S+ T GT
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKR 216
Query: 771 YAAPEI---AYTMRATEKY---DVYSFGVLVFEVIK 800
Y APE+ + M+ E + D+Y+ G++ +E+ +
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 119
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 120 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 177
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 178 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 228
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 229 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 99
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 100 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 158 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 208
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 209 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 100
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 101 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 159 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 209
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 210 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 99
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 100 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 158 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 208
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 209 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 37/217 (17%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLN-EVLALKEIRHRNNVKFH 665
IGKG G V++ + G+ VAVK F+S+ + F E+ +RH N + F
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFI 89
Query: 666 GF--CYNGPHS--FLVCEYLDRGSLARILGD-DVTAKELGWNRRINVIKGVANALSYLHH 720
NG + +LV +Y + GSL L VT + + I + A+ L++LH
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 144
Query: 721 DCL-----PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWT------EFAGTF 769
+ + P+I HRD+ SKN+L+ N ++D G+A V S+ T GT
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 202
Query: 770 GYAAPEI---AYTMRATEKY---DVYSFGVLVFEVIK 800
Y APE+ + M+ E + D+Y+ G++ +E+ +
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 239
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 607 IGKGGQGSVYKAELPSGD-IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G+G +VYK + D +VA+K+ + G + EV LK+++H N V H
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTA---IREVSLLKDLKHANIVTLH 66
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
+ LV EYLD+ L + L D + N ++ + + + L+Y H
Sbjct: 67 DIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMH-NVKLFLFQ-LLRGLAYCHRQ---K 120
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY-TMRATE 784
++HRD+ +N+L++ E ++DFG+A+ + + T Y P+I + +
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYST 180
Query: 785 KYDVYSFGVLVFEVIKGN 802
+ D++ G + +E+ G
Sbjct: 181 QIDMWGVGCIFYEMATGR 198
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 607 IGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G G VYKA+ +G + A K ++ + + ++++ E+ L H VK
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHPYIVKLL 82
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNR-----RINVI-KGVANALSYLH 719
G Y+ +++ E+ G++ I+ L +R +I V+ + + AL++LH
Sbjct: 83 GAYYHDGKLWIMIEFCPGGAVDAIM--------LELDRGLTEPQIQVVCRQMLEALNFLH 134
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY- 778
IIHRD+ + NVL+ + ++DFG++ F GT + APE+
Sbjct: 135 SK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 779 -TMRATE---KYDVYSFGVLVFEVIKGNHP 804
TM+ T K D++S G+ + E+ + P
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKK----FNSQLLSGNMADHDEFLNEVLALKEIRHRNN 661
+G G G+V A + +G VA+KK F S+L + E+ LK +RH N
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRA------YRELRLLKHMRHENV 86
Query: 662 VKF-HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHH 720
+ F + YL + LG + ++LG +R ++ + L Y+H
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH- 145
Query: 721 DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT- 779
IIHRD+ N+ ++ + E + DFG+A+ S T Y APE+
Sbjct: 146 --AAGIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVVTRWYRAPEVILNW 200
Query: 780 MRATEKYDVYSFGVLVFEVIKGN 802
MR T+ D++S G ++ E+I G
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 607 IGKGGQGSVYKA---ELPSGDI---VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G+G G VY+ ++ G+ VAVK N S ++ + EFLNE +K +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 82
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNR-------RINVIKGVAN 713
V+ G G + +V E + G L L E R I + +A+
Sbjct: 83 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT----F 769
++YL+ +HR+++++N ++ +F + DFG+ + + + +++ G
Sbjct: 143 GMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI--YETDYYRKGGKGLLPV 197
Query: 770 GYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ APE T D++SFGV+++E+
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 94
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 95 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 152
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 153 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 203
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 204 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 72
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 73 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 131 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 181
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 182 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 106
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 107 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 164
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 165 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 215
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 216 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 607 IGKGGQGSVYKA---ELPSGDI---VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G+G G VY+ ++ G+ VAVK N S ++ + EFLNE +K +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNR-------RINVIKGVAN 713
V+ G G + +V E + G L L E R I + +A+
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT----F 769
++YL+ +HR+++++N ++ +F + DFG+ + + + +++ G
Sbjct: 142 GMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI--YETDYYRKGGKGLLPV 196
Query: 770 GYAAPEIAYTMRATEKYDVYSFGVLVFEV 798
+ APE T D++SFGV+++E+
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 72
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 73 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 131 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 181
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 182 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF--QNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
++V E +D +L++++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI-----QMELDHERMSYLLYQMLCGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIKG 801
M E D++S G ++ E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF--QNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
++V E +D +L++++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI-----QMELDHERMSYLLYQMLVGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIKG 801
M E D++S G ++ E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 72
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 73 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 131 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 181
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 182 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 86
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 87 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 145 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 195
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 196 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 92/220 (41%), Gaps = 26/220 (11%)
Query: 592 EEIIKATDDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEV 650
EE+ AT +G+G G V++ E +G AVKK ++ E+
Sbjct: 90 EEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE---------EL 136
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKG 710
+A + V +G GP + E L+ GSL +++ + E +R + +
Sbjct: 137 MACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYLGQ 193
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSN-FEAHVSDFGIAKFVGPHSSNWT-----E 764
L YLH I+H D+ + NVLL S+ A + DFG A + P +
Sbjct: 194 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
Query: 765 FAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
GT + APE+ K DV+S ++ ++ G HP
Sbjct: 251 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 87
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 88 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 146 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 196
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 197 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 35/216 (16%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IGKG G V++ + G+ VAVK F+S+ + + + +L RH N + F
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVML-----RHENILGFIA 64
Query: 667 F--CYNGPHS--FLVCEYLDRGSLARILGD-DVTAKELGWNRRINVIKGVANALSYLHHD 721
NG + +LV +Y + GSL L VT + + I + A+ L++LH +
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 119
Query: 722 CL-----PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWT------EFAGTFG 770
+ P+I HRD+ SKN+L+ N ++D G+A V S+ T GT
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKR 177
Query: 771 YAAPEI---AYTMRATEKY---DVYSFGVLVFEVIK 800
Y APE+ + M+ E + D+Y+ G++ +E+ +
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 86
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 87 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 145 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 195
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 196 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 70
Query: 664 FHGFC-----YNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 71 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 129 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 179
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 180 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 212
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 71
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 72 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 130 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 180
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 181 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
++V E +D +L++++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI-----QMELDHERMSYLLYQMLCGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIKG 801
M E D++S G ++ E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 87
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 88 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 146 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 196
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 197 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 87
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 88 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 146 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 196
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 197 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 56.2 bits (134), Expect = 7e-08, Method: Composition-based stats.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 67
Query: 664 FHGFC-----YNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 68 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 126 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 176
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 23/204 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
++V E +D +L +++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIKG 801
M E D++S G ++ E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 23/204 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
++V E +D +L +++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIKG 801
M E D++S G ++ E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 35/216 (16%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IGKG G V++ + G+ VAVK F+S+ + + + +L RH N + F
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVML-----RHENILGFIA 67
Query: 667 F--CYNGPHS--FLVCEYLDRGSLARILGD-DVTAKELGWNRRINVIKGVANALSYLHHD 721
NG + +LV +Y + GSL L VT + + I + A+ L++LH +
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 122
Query: 722 CL-----PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWT------EFAGTFG 770
+ P+I HRD+ SKN+L+ N ++D G+A V S+ T GT
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKR 180
Query: 771 YAAPEI---AYTMRATEKY---DVYSFGVLVFEVIK 800
Y APE+ + M+ E + D+Y+ G++ +E+ +
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 216
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
++V E +D +L++++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLSQVI-----QMELDHERMSYLLYQMLCGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIKG 801
M E D++S G ++ E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 35/216 (16%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IGKG G V++ + G+ VAVK F+S+ + E+ +RH N + F
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE-----AEIYQTVMLRHENILGFIA 65
Query: 667 F--CYNGPHS--FLVCEYLDRGSLARILGD-DVTAKELGWNRRINVIKGVANALSYLHHD 721
NG + +LV +Y + GSL L VT + + I + A+ L++LH +
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 120
Query: 722 CL-----PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWT------EFAGTFG 770
+ P+I HRD+ SKN+L+ N ++D G+A V S+ T GT
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKR 178
Query: 771 YAAPEI---AYTMRATEKY---DVYSFGVLVFEVIK 800
Y APE+ + M+ E + D+Y+ G++ +E+ +
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 35/216 (16%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IGKG G V++ + G+ VAVK F+S+ + + + +L RH N + F
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVML-----RHENILGFIA 70
Query: 667 F--CYNGPHS--FLVCEYLDRGSLARILGD-DVTAKELGWNRRINVIKGVANALSYLHHD 721
NG + +LV +Y + GSL L VT + + I + A+ L++LH +
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 125
Query: 722 CL-----PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWT------EFAGTFG 770
+ P+I HRD+ SKN+L+ N ++D G+A V S+ T GT
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKR 183
Query: 771 YAAPEI---AYTMRATEKY---DVYSFGVLVFEVIK 800
Y APE+ + M+ E + D+Y+ G++ +E+ +
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 23/204 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIG 88
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
++V E +D +L +++ EL R ++ + + +
Sbjct: 89 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 142
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 143 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 198
Query: 778 YTMRATEKYDVYSFGVLVFEVIKG 801
M E D++S G ++ E+IKG
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 104
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 163
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 218
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGR 240
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 71
Query: 664 FHGF-----CYNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 72 FSGVIRLLDWFERPDSFVLI--LERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 130 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 180
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 181 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 67
Query: 664 FHGFC-----YNGPHSFLVCEYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVAN 713
F G + P SF++ L+R + L D +T + EL + V++ V +
Sbjct: 68 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
H+C ++HRDI +N+L+D N E + DFG + + +T+F GT Y+
Sbjct: 126 C-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRVYS 176
Query: 773 APE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PE I Y V+S G+L+++++ G+ P
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 606 CIGKGGQGSVYKAEL--PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
CIG+G G V++ P +AV + + + ++FL E L +++ H + VK
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFLQEALTMRQFDHPHIVK 75
Query: 664 FHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCL 723
G P +++ E G L L V L I ++ AL+YL
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK-- 130
Query: 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTF--GYAAPEIAYTMR 781
+HRDI+++NVL+ + + DFG+++++ S+ + G + APE R
Sbjct: 131 -RFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 782 ATEKYDVYSFGVLVFEVI 799
T DV+ FGV ++E++
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ + F T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 646 FLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRI 705
L+EV LK++ H N +K + F + + +LV E G L + + ++
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL---FDEIILRQKFSEVDAA 124
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGI-AKF-VGPHSS 760
++K V + +YLH +I+HRD+ +N+LL+S + DFG+ A F VG
Sbjct: 125 VIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG---G 178
Query: 761 NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
E GT Y APE+ + EK DV+S GV+++ ++ G P
Sbjct: 179 KMKERLGTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ + F T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 36/211 (17%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV--- 662
+G G GSV A + SG+ VA+KK + S A E+L LK ++H N +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRA--YRELLLLKHMQHENVIGLL 89
Query: 663 ----------KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVA 712
F+ F +LV ++ + L +I+G + +++ + ++ +
Sbjct: 90 DVFTPASSLRNFYDF-------YLVMPFM-QTDLQKIMGLKFSEEKIQY-----LVYQML 136
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772
L Y+H ++HRD+ N+ ++ + E + DFG+A+ + T + T Y
Sbjct: 137 KGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHA---DAEMTGYVVTRWYR 190
Query: 773 APEIAYT-MRATEKYDVYSFGVLVFEVIKGN 802
APE+ + M + D++S G ++ E++ G
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 103
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 104 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 162
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 217
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGR 239
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLL-SGNMADHDE-FLNEVLALKEI-RHRNNV 662
+G G G V +A G AV K ++L S AD E ++E+ + + +H N V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILG-------DDVTAKELGWNRRINVIKGVANAL 715
G C +G ++ EY G L L D + L ++ VA +
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYA 772
++L + IHRD++++NVLL + A + DFG+A+ + + SN+ +
Sbjct: 166 AFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDI-MNDSNYIVKGNARLPVKWM 221
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVI 799
APE + T + DV+S+G+L++E+
Sbjct: 222 APESIFDCVYTVQSDVWSYGILLWEIF 248
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK--RTYRELRLLKHMKHENVI--- 90
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 149
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 204
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 26/220 (11%)
Query: 592 EEIIKATDDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEV 650
EE+ AT +G+G G V++ E +G AVKK ++ E+
Sbjct: 71 EEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE---------EL 117
Query: 651 LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKG 710
+A + V +G GP + E L+ GSL +++ + E +R + +
Sbjct: 118 MACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYLGQ 174
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSN-FEAHVSDFGIAKFVGPHSS-----NWTE 764
L YLH I+H D+ + NVLL S+ A + DFG A + P
Sbjct: 175 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 765 FAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
GT + APE+ K DV+S ++ ++ G HP
Sbjct: 232 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 80
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 139
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 194
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF- 664
IG G QG V A + G VAVKK + N E++ LK + H+N +
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPF--QNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 665 -----HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH 719
+LV E +D +L +++ EL R ++ + + +LH
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIH-----MELDHERMSYLLYQMLCGIKHLH 141
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNW--TEFAGTFGYAAPEIA 777
IIHRD+ N+++ S+ + DFG+A+ S+N+ T + T Y APE+
Sbjct: 142 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---STNFMMTPYVVTRYYRAPEVI 195
Query: 778 YTMRATEKYDVYSFGVLVFEVIKGN 802
M E D++S G ++ E++KG+
Sbjct: 196 LGMGYKENVDIWSVGCIMGELVKGS 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF--QNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
+LV E +D +L +++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVI-----QMELDHERMSYLLYQMLXGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIK 800
M E D++S G ++ E+++
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 91
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 150
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ + T + T Y APEI M
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---ADEMTGYVATRWYRAPEIMLNWM 205
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 94
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 95 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 153
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 154 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 208
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 209 HYNQTVDIWSVGCIMAELLTGR 230
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF--QNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
+LV E +D +L +++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIK 800
M E D++S G ++ E+++
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 80
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 139
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ + F T Y APEI M
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG---FVATRWYRAPEIMLNWM 194
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 89
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 203
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 13/201 (6%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
+G G G V+K E + + K + + M D +E NE+ + ++ H N ++ +
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKI---IKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 667 FCYNGPHSFLVCEYLDRGSL-ARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725
+ LV EY+D G L RI+ + EL I +K + + ++H
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLTELD---TILFMKQICEGIRHMHQ---MY 207
Query: 726 IIHRDISSKNVLLDSNFEAHVS--DFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRAT 783
I+H D+ +N+L + + DFG+A+ P F GT + APE+ +
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEVVNYDFVS 266
Query: 784 EKYDVYSFGVLVFEVIKGNHP 804
D++S GV+ + ++ G P
Sbjct: 267 FPTDMWSVGVIAYMLLSGLSP 287
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 647 LNEVLALKEIR-HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRI 705
L EV L+++ H N ++ FLV + + +G L L + VT E + +
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 117
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF 765
+ V AL L +I+HRD+ +N+LLD + ++DFG + + P E
Sbjct: 118 RALLEVICALHKL------NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREV 170
Query: 766 AGTFGYAAPE-IAYTMRAT-----EKYDVYSFGVLVFEVIKGNHP 804
GT Y APE I +M ++ D++S GV+++ ++ G+ P
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIG 89
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
++V E +D +L +++ EL R ++ + + +
Sbjct: 90 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 143
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S F T Y APE+
Sbjct: 144 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMVPFVVTRYYRAPEVI 199
Query: 778 YTMRATEKYDVYSFGVLVFEVIKG 801
M E D++S G ++ E+IKG
Sbjct: 200 LGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 644 DEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNR 703
+E EV L+EIRH N + H N L+ E + G L L + + E +
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE---DE 116
Query: 704 RINVIKGVANALSYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPHS 759
+K + + + YLH I H D+ +N+ LLD N + DFGIA + +
Sbjct: 117 ATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EA 171
Query: 760 SNWTEFAGTFG---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
N EF FG + APEI + D++S GV+ + ++ G P
Sbjct: 172 GN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 641 ADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELG 700
AD +E + E + ++ + V+ G C LV E G L + L +E+
Sbjct: 378 ADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIP 434
Query: 701 WNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSS 760
+ ++ V+ + YL + +HR+++++NVLL + A +SDFG++K +G S
Sbjct: 435 VSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491
Query: 761 NWT-EFAGTF--GYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHP 804
+T AG + + APE + + + DV+S+GV ++E + G P
Sbjct: 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY-TM 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNAM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 91
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 150
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ + T + T Y APEI M
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---ADEMTGYVATRWYRAPEIMLNWM 205
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 91
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 150
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ + T + T Y APEI M
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---ADEMTGYVATRWYRAPEIMLNWM 205
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLL-SGNMADHDE-FLNEVLALKEI-RHRNNV 662
+G G G V +A G AV K ++L S AD E ++E+ + + +H N V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSL-------ARILGDD----VTAKELGWNRRINVIKGV 711
G C +G ++ EY G L +R+L D + L ++ V
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 712 ANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT--- 768
A +++L + IHRD++++NVLL + A + DFG+A+ + + SN+
Sbjct: 174 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDI-MNDSNYIVKGNARLP 229
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ APE + T + DV+S+G+L++E+
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 92
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 150
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 151 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 210 SKGYTKSIDIWSVGCILAEML-SNRP 234
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 84
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 142
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 143 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 202 SKGYTKSIDIWSVGCILAEML-SNRP 226
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 84
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 142
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 143 -ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 202 SKGYTKSIDIWSVGCILAEML-SNRP 226
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 84
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 142
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 143 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 202 SKGYTKSIDIWSVGCILAEML-SNRP 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 107
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 108 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 166
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 221
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGR 243
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 95
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 96 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 154
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 155 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 209
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGR 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRT--YRELRLLKHMKHENVI--- 96
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 155
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 210
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF--QNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
+LV E +D +L +++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVI-----QMELDHERMSYLLYQMLCGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIK 800
M E D++S G ++ E+++
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVR 220
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 84
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 142
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 143 -ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 202 SKGYTKSIDIWSVGCILAEML-SNRP 226
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 86
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 144
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 145 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 204 SKGYTKSIDIWSVGCILAEML-SNRP 228
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 86
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 145
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 200
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 104
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 163
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 218
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 646 FLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRI 705
L+EV LK++ H N +K + F + + +LV E G L + + ++
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL---FDEIILRQKFSEVDAA 107
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGI-AKF-VGPHSS 760
++K V + +YLH +I+HRD+ +N+LL+S + DFG+ A F VG
Sbjct: 108 VIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG---G 161
Query: 761 NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
E GT Y APE+ + EK DV+S GV+++ ++ G P
Sbjct: 162 KMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 103
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 104 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 162
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 217
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGR 239
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 89
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 203
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 89
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 203
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 83
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 84 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 142
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 143 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 197
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 198 HYNQTVDIWSVGCIMAELLTGR 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLL-SGNMADHDE-FLNEVLALKEI-RHRNNV 662
+G G G V +A G AV K ++L S AD E ++E+ + + +H N V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILG-------DDVTAKELGWNRRINVIKGVANAL 715
G C +G ++ EY G L L D + L ++ VA +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 716 SYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---FGYA 772
++L + IHRD++++NVLL + A + DFG+A+ + + SN+ +
Sbjct: 174 AFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDI-MNDSNYIVKGNARLPVKWM 229
Query: 773 APEIAYTMRATEKYDVYSFGVLVFEVI 799
APE + T + DV+S+G+L++E+
Sbjct: 230 APESIFDCVYTVQSDVWSYGILLWEIF 256
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 104
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 162
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 163 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 222 SKGYTKSIDIWSVGCILAEML-SNRP 246
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 90
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 149
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 204
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 91
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 150
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 205
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 89
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 203
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 88
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS-- 146
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 147 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 206 SKGYTKSIDIWSVGCILAEML-SNRP 230
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 96
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 155
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 210
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 86
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 145
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 200
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 96
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 155
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 210
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 647 LNEVLALKEIR-HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRI 705
L EV L+++ H N ++ FLV + + +G L L + VT E + +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF 765
+ V AL L +I+HRD+ +N+LLD + ++DFG + + P E
Sbjct: 131 RALLEVICALHKL------NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREV 183
Query: 766 AGTFGYAAPEIAYTMRAT------EKYDVYSFGVLVFEVIKGNHP 804
GT Y APEI ++ D++S GV+++ ++ G+ P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 95
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 96 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 154
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 155 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 209
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 80
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 139
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 194
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 89
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 147
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 148 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 206
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 207 SKGYTKSIDIWSVGCILAEML-SNRP 231
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 90
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 148
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 149 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 207
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 208 SKGYTKSIDIWSVGCILAEML-SNRP 232
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 81
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 139
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 140 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 198
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 199 SKGYTKSIDIWSVGCILAEML-SNRP 223
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 88
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 146
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 147 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 206 SKGYTKSIDIWSVGCILAEML-SNRP 230
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 82
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 140
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 141 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 200 SKGYTKSIDIWSVGCILAEML-SNRP 224
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 90
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 149
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 204
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 81
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 82 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 140
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 141 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 195
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGR 217
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 88
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 146
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 147 -ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 206 SKGYTKSIDIWSVGCILAEML-SNRP 230
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 34/236 (14%)
Query: 586 DGKIMHEEIIKATDDFDEKFCIGKGGQGS-VYKAELPSGDIVAVKKFNSQLLSGNMADHD 644
DG +I F K +G G +G+ VY+ + D VAVK+ + S AD
Sbjct: 11 DGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRD-VAVKRILPECFS--FAD-- 65
Query: 645 EFLNEVLALKEI-RHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKE---LG 700
EV L+E H N +++ FC F +Y+ A L + V K+ LG
Sbjct: 66 ---REVQLLRESDEHPNVIRY--FCTEKDRQF---QYIAIELCAATLQEYVEQKDFAHLG 117
Query: 701 WNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD-----SNFEAHVSDFGIAK-- 753
I +++ + L++LH +I+HRD+ N+L+ +A +SDFG+ K
Sbjct: 118 LEP-ITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173
Query: 754 FVGPHS-SNWTEFAGTFGYAAPEI---AYTMRATEKYDVYSFGVLVFEVI-KGNHP 804
VG HS S + GT G+ APE+ T D++S G + + VI +G+HP
Sbjct: 174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 81
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 82 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 140
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 141 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 195
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 82
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 83 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 141
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 142 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 196
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 197 HYNQTVDIWSVGCIMAELLTGR 218
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 90
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 149
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 150 --ADIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 204
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 84
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 142
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 143 -ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 202 SKGYTKSIDIWSVGCILAEML-SNRP 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 86
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 145
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 200
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 592 EEIIKATDDFDEKFC----IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEF 646
+E+ K + E++ +G G GSV A + +G VAVKK + S A
Sbjct: 7 QELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT-- 64
Query: 647 LNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWN 702
E+ LK ++H N + G + + E+ D + ++G D V +L +
Sbjct: 65 YRELRLLKHMKHENVI---GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDD 121
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNW 762
+I + L Y+H IIHRD+ N+ ++ + E + DFG+A+
Sbjct: 122 HVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEM 175
Query: 763 TEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGN 802
T + T Y APEI M + D++S G ++ E++ G
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 82
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 140
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 141 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 200 SKGYTKSIDIWSVGCILAEML-SNRP 224
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
+LV E +D +L +++ EL R ++ + + +
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVI-----QMELDHERMSYLLYQMLXGIKH 134
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 135 LHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 190
Query: 778 YTMRATEKYDVYSFGVLVFEVIK 800
M E D++S G ++ E+++
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVR 213
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 104
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + YL + L + + L + + + L Y+H
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 162
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 163 -ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 222 SKGYTKSIDIWSVGCILAEML-SNRP 246
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRT------LREIKILLRFRHENII 88
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 146
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 147 -ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 206 SKGYTKSIDIWSVGCILAEML-SNRP 230
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRT------LREIQILLRFRHENVI 104
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ Y+ + + L + +++L + + + L Y+H
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHS-- 162
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+L+++ + + DFG+A+ P H+ TE T Y APEI
Sbjct: 163 -ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 222 SKGYTKSIDIWSVGCILAEML-SNRP 246
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 645 EFLNEVLALKEIRHRNNV-KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNR 703
E L+E+ L+ + V H N L+ EY G + + ++ A+ + N
Sbjct: 74 EILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSEND 132
Query: 704 RINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF---EAHVSDFGIAKFVGPHSS 760
I +IK + + YLH + +I+H D+ +N+LL S + + + DFG+++ +G H+
Sbjct: 133 VIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG-HAC 188
Query: 761 NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
E GT Y APEI T D+++ G++ + ++ P
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 86
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 145
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 146 --ADIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 200
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT------LREIKILLAFRHENII 86
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 144
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 145 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 204 SKGYTKSIDIWSVGCILAEML-SNRP 228
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
+LV E +D +L +++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVI-----QMELDHERMSYLLYQMLXGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIK 800
M E D++S G ++ E+++
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVR 220
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAG 767
+ L Y+H +++HRD+ N+LL++ + + DFG+A+ P H+ TE+
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 768 TFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHP 804
T Y APEI + T+ D++S G ++ E++ N P
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRP 230
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIS 86
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
+LV E +D +L +++ EL R ++ + + +
Sbjct: 87 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 140
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 141 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 196
Query: 778 YTMRATEKYDVYSFGVLVFEVIK 800
M E D++S G ++ E+++
Sbjct: 197 LGMGYKENVDIWSVGCIMGEMVR 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
+LV E +D +L +++ EL R ++ + + +
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 134
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 135 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 190
Query: 778 YTMRATEKYDVYSFGVLVFEVIK 800
M E D++S G ++ E+++
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVR 213
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
+LV E +D +L +++ EL R ++ + + +
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 142
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 143 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 198
Query: 778 YTMRATEKYDVYSFGVLVFEVIK 800
M E D++S G ++ E+++
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVR 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
+LV E +D +L +++ EL R ++ + + +
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 135
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 136 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 191
Query: 778 YTMRATEKYDVYSFGVLVFEVIK 800
M E D++S G ++ E+++
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVR 214
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
+LV E +D +L +++ EL R ++ + + +
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 142
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 143 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 198
Query: 778 YTMRATEKYDVYSFGVLVFEVIK 800
M E D++S G ++ E+++
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVR 221
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
+LV E +D +L +++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIK 800
M E D++S G ++ E+++
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVR 220
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
+LV E +D +L +++ EL R ++ + + +
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 135
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 136 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 191
Query: 778 YTMRATEKYDVYSFGVLVFEVIK 800
M E D++S G ++ E+++
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVR 214
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
+LV E +D +L +++ EL R ++ + + +
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 179
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 180 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 235
Query: 778 YTMRATEKYDVYSFGVLVFEVIK 800
M E D++S G ++ E+++
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVR 258
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
+LV E +D +L +++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIK 800
M E D++S G ++ E+++
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVR 220
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNW 762
R I + + L +LH +II+RD+ +NVLLD + +SD G+A + +
Sbjct: 290 RAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+AGT G+ APE+ D ++ GV ++E+I P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNW 762
R I + + L +LH +II+RD+ +NVLLD + +SD G+A + +
Sbjct: 290 RAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+AGT G+ APE+ D ++ GV ++E+I P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNW 762
R I + + L +LH +II+RD+ +NVLLD + +SD G+A + +
Sbjct: 290 RAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+AGT G+ APE+ D ++ GV ++E+I P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 166/423 (39%), Gaps = 48/423 (11%)
Query: 103 SKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNN 162
+ + L+L NQL L + +QL L + N + P +L ++ L L HN
Sbjct: 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 84
Query: 163 LHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNL 222
L + +NL L+L NS+ + K K+L+ LDLS N S + + L
Sbjct: 85 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQL 144
Query: 223 SSLTMMSLFNN---SLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLY 279
+L + L NN +L I N SL L L NQ+ F P + L L+L
Sbjct: 145 ENLQELLLSNNKIQALKSEELDIFAN-SSLKKLELSSNQIKEFSPGCFHAIGRLFGLFL- 202
Query: 280 NNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAF--GDHP 337
NN G SL+E +LC L SI + L+ + LS F
Sbjct: 203 NNVQLG---------PSLTE-KLCLELANT----SIRNLSLSNSQLSTTSNTTFLGLKWT 248
Query: 338 NLTFLDLSNNNF--CGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSN 395
NLT LDLS NN G SF W +L F + NNI + ++ L+L +
Sbjct: 249 NLTMLDLSYNNLNVVGNDSFAW--LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRS 306
Query: 396 HI-----VGKIPVQLEMXXXXXXXXXXXXXXXGGVP----LEFGSLTKLQYLDLS----- 441
+ +P + +P F L L+YL LS
Sbjct: 307 FTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTS 366
Query: 442 ----TNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEI 497
TN+ S+ S LH LNL+ N++S F L HL LDL N + +E+
Sbjct: 367 LRTLTNETFVSLAHS-----PLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 421
Query: 498 PPQ 500
Q
Sbjct: 422 TGQ 424
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 429 FGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDL 488
F ++L LD+ N +S P+ L L LNL +N+LS F +L+EL L
Sbjct: 45 FTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104
Query: 489 SHNILQEEIPPQVCNMGSLEKLNLSHNNLS 518
N +Q+ +L L+LSHN LS
Sbjct: 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLS 134
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 462 LNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCN-MGSLEKLNLSHNNLSDF 520
LNL++NQL F + L+ LD+ N + ++ P++C + L+ LNL HN LS
Sbjct: 30 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI-SKLEPELCQKLPMLKVLNLQHNELSQL 88
Query: 521 IPRCFEEMRSLSCIDISYNELH 542
+ F +L+ + + N +
Sbjct: 89 SDKTFAFCTNLTELHLMSNSIQ 110
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Query: 432 LTKLQYLDLSTNKLSSSIPKS--------IGNLLKLHYLNLSNNQLSHKIPTE-FEKLIH 482
L KL+ LDL N L+ + + L LH LNL +N +IP E F+ L
Sbjct: 503 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFE 561
Query: 483 LSELDLSHNILQEEIPPQVC-NMGSLEKLNLSHNNLSDFIPRCF-EEMRSLSCIDISYNE 540
L +DL N L +P V N SL+ LNL N ++ + F R+L+ +D+ +N
Sbjct: 562 LKIIDLGLNNLN-TLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNP 620
Query: 541 LHGPIPNSTAFKDGLMEGNKGLKRVSQEEQSNS 573
+ F + + E + + +S N+
Sbjct: 621 FDCTCESIAWFVNWINETHTNIPELSSHYLCNT 653
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT------LREIKILLAFRHENII 86
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 144
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ TE+ T Y APEI
Sbjct: 145 -ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 204 SKGYTKSIDIWSVGCILAEML-SNRP 228
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 36/220 (16%)
Query: 600 DFDEKFCIGKGGQGSVYKAE-LPSGDIVAVK--KFNSQLLSGNMADHDEFLNEVLALKEI 656
DF E IG GG G V+KA+ G +K K+N++ EV AL ++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE----------REVKALAKL 61
Query: 657 RHRNNVKFHGFCYNG----PHS-------------FLVCEYLDRGSLARILGDDVTAKEL 699
H N V ++G C++G P + F+ E+ D+G+L + + + ++L
Sbjct: 62 DHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKL 119
Query: 700 GWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS 759
+ + + + + Y+H +I+RD+ N+ L + + DFG+ + +
Sbjct: 120 DKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL-KND 175
Query: 760 SNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
GT Y +PE + ++ D+Y+ G+++ E++
Sbjct: 176 GKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
+D F+ + +G+G VY+ + K + ++L + D E+ L +
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQ----KPYALKVLKKTV-DKKIVRTEIGVLLRLS 106
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNR-RINVIKGVANALS 716
H N +K LV E + G L D + K R + +K + A++
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELF----DRIVEKGYYSERDAADAVKQILEAVA 162
Query: 717 YLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH + I+HRD+ +N+L + + ++DFG++K V H GT GY A
Sbjct: 163 YLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV-EHQVLMKTVCGTPGYCA 218
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + D++S G++ + ++ G P
Sbjct: 219 PEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
++V E +D +L +++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T T Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPEVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIKG 801
M E D++S G ++ E+IKG
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNW 762
R I + + L +LH +II+RD+ +NVLLD + +SD G+A + +
Sbjct: 290 RAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+AGT G+ APE+ D ++ GV ++E+I P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 166/423 (39%), Gaps = 48/423 (11%)
Query: 103 SKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNN 162
+ + L+L NQL L + +QL L + N + P +L ++ L L HN
Sbjct: 35 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 94
Query: 163 LHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNL 222
L + +NL L+L NS+ + K K+L+ LDLS N S + + L
Sbjct: 95 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQL 154
Query: 223 SSLTMMSLFNN---SLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLY 279
+L + L NN +L I N SL L L NQ+ F P + L L+L
Sbjct: 155 ENLQELLLSNNKIQALKSEELDIFAN-SSLKKLELSSNQIKEFSPGCFHAIGRLFGLFL- 212
Query: 280 NNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAF--GDHP 337
NN G SL+E +LC L SI + L+ + LS F
Sbjct: 213 NNVQLG---------PSLTE-KLCLELANT----SIRNLSLSNSQLSTTSNTTFLGLKWT 258
Query: 338 NLTFLDLSNNNF--CGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSN 395
NLT LDLS NN G SF W +L F + NNI + ++ L+L +
Sbjct: 259 NLTMLDLSYNNLNVVGNDSFAW--LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRS 316
Query: 396 HI-----VGKIPVQLEMXXXXXXXXXXXXXXXGGVP----LEFGSLTKLQYLDLS----- 441
+ +P + +P F L L+YL LS
Sbjct: 317 FTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTS 376
Query: 442 ----TNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEI 497
TN+ S+ S LH LNL+ N++S F L HL LDL N + +E+
Sbjct: 377 LRTLTNETFVSLAHS-----PLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 431
Query: 498 PPQ 500
Q
Sbjct: 432 TGQ 434
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 429 FGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDL 488
F ++L LD+ N +S P+ L L LNL +N+LS F +L+EL L
Sbjct: 55 FTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 114
Query: 489 SHNILQEEIPPQVCNMGSLEKLNLSHNNLS 518
N +Q+ +L L+LSHN LS
Sbjct: 115 MSNSIQKIKNNPFVKQKNLITLDLSHNGLS 144
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 462 LNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCN-MGSLEKLNLSHNNLSDF 520
LNL++NQL F + L+ LD+ N + ++ P++C + L+ LNL HN LS
Sbjct: 40 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI-SKLEPELCQKLPMLKVLNLQHNELSQL 98
Query: 521 IPRCFEEMRSLSCIDISYNELH 542
+ F +L+ + + N +
Sbjct: 99 SDKTFAFCTNLTELHLMSNSIQ 120
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Query: 432 LTKLQYLDLSTNKLSSSIPKS--------IGNLLKLHYLNLSNNQLSHKIPTE-FEKLIH 482
L KL+ LDL N L+ + + L LH LNL +N +IP E F+ L
Sbjct: 513 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFE 571
Query: 483 LSELDLSHNILQEEIPPQVC-NMGSLEKLNLSHNNLSDFIPRCF-EEMRSLSCIDISYNE 540
L +DL N L +P V N SL+ LNL N ++ + F R+L+ +D+ +N
Sbjct: 572 LKIIDLGLNNLN-TLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNP 630
Query: 541 LHGPIPNSTAFKDGLMEGNKGLKRVSQEEQSNS 573
+ F + + E + + +S N+
Sbjct: 631 FDCTCESIAWFVNWINETHTNIPELSSHYLCNT 663
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
+LV E +D +L +++ EL R ++ + + +
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 179
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 180 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 235
Query: 778 YTMRATEKYDVYSFGVLVFEVIK 800
M E D++S G ++ E+++
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVR 258
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLL-SGNMADHDE-FLNEVLALKEI-RHRNNV 662
+G G G V +A G AV K ++L S AD E ++E+ + + +H N V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSL-------ARILGDD---VTAKELGWNRRI-NVIKGV 711
G C +G ++ EY G L +R+L D A R + + V
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 712 ANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT--- 768
A +++L + IHRD++++NVLL + A + DFG+A+ + + SN+
Sbjct: 174 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDI-MNDSNYIVKGNARLP 229
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ APE + T + DV+S+G+L++E+
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + D+G+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDYGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 166/423 (39%), Gaps = 48/423 (11%)
Query: 103 SKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNN 162
+ + L+L NQL L + +QL L + N + P +L ++ L L HN
Sbjct: 30 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 89
Query: 163 LHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNL 222
L + +NL L+L NS+ + K K+L+ LDLS N S + + L
Sbjct: 90 LSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQL 149
Query: 223 SSLTMMSLFNN---SLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLY 279
+L + L NN +L I N SL L L NQ+ F P + L L+L
Sbjct: 150 ENLQELLLSNNKIQALKSEELDIFAN-SSLKKLELSSNQIKEFSPGCFHAIGRLFGLFL- 207
Query: 280 NNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAF--GDHP 337
NN G SL+E +LC L SI + L+ + LS F
Sbjct: 208 NNVQLG---------PSLTE-KLCLELANT----SIRNLSLSNSQLSTTSNTTFLGLKWT 253
Query: 338 NLTFLDLSNNNF--CGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSN 395
NLT LDLS NN G SF W +L F + NNI + ++ L+L +
Sbjct: 254 NLTMLDLSYNNLNVVGNDSFAW--LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRS 311
Query: 396 HI-----VGKIPVQLEMXXXXXXXXXXXXXXXGGVP----LEFGSLTKLQYLDLS----- 441
+ +P + +P F L L+YL LS
Sbjct: 312 FTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTS 371
Query: 442 ----TNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEI 497
TN+ S+ S LH LNL+ N++S F L HL LDL N + +E+
Sbjct: 372 LRTLTNETFVSLAHS-----PLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQEL 426
Query: 498 PPQ 500
Q
Sbjct: 427 TGQ 429
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 429 FGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDL 488
F ++L LD+ N +S P+ L L LNL +N+LS F +L+EL L
Sbjct: 50 FTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 109
Query: 489 SHNILQEEIPPQVCNMGSLEKLNLSHNNLS 518
N +Q+ +L L+LSHN LS
Sbjct: 110 MSNSIQKIKNNPFVKQKNLITLDLSHNGLS 139
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 462 LNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCN-MGSLEKLNLSHNNLSDF 520
LNL++NQL F + L+ LD+ N + ++ P++C + L+ LNL HN LS
Sbjct: 35 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI-SKLEPELCQKLPMLKVLNLQHNELSQL 93
Query: 521 IPRCFEEMRSLSCIDISYNELH 542
+ F +L+ + + N +
Sbjct: 94 SDKTFAFCTNLTELHLMSNSIQ 115
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Query: 432 LTKLQYLDLSTNKLSSSIPKS--------IGNLLKLHYLNLSNNQLSHKIPTE-FEKLIH 482
L KL+ LDL N L+ + + L LH LNL +N +IP E F+ L
Sbjct: 508 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFE 566
Query: 483 LSELDLSHNILQEEIPPQVC-NMGSLEKLNLSHNNLSDFIPRCF-EEMRSLSCIDISYNE 540
L +DL N L +P V N SL+ LNL N ++ + F R+L+ +D+ +N
Sbjct: 567 LKIIDLGLNNLN-TLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNP 625
Query: 541 LHGPIPNSTAFKDGLMEGNKGLKRVSQEEQSNS 573
+ F + + E + + +S N+
Sbjct: 626 FDCTCESIAWFVNWINETHTNIPELSSHYLCNT 658
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 31/225 (13%)
Query: 600 DFDEKFCIGKGGQGSVYKAELPSGDI-VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
DF+ C+G+GG G V++A+ D A+K+ L ++ + EV AL ++ H
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR---LPNRELAREKVMREVKALAKLEH 62
Query: 659 RNNVKF----------HGFCYNGPHSFLVCEY--LDRGSLARILGDDVTAKELGWNRRIN 706
V++ + P +L + + +L + T +E + ++
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 707 VIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG---------- 756
+ +A A+ +LH L +HRD+ N+ + V DFG+ +
Sbjct: 123 IFLQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 757 --PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
P + T GT Y +PE + + K D++S G+++FE++
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 38/217 (17%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVK 663
+G GG GSVY S ++ VA+K +S G + + EV+ LK++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSG 67
Query: 664 FHGFC-----YNGPHSFLVCEYLDRGSLARILGDDVT---------AKELGWNRRINVIK 709
F G + P SF++ L+R + L D +T A+ W
Sbjct: 68 FSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQ------- 118
Query: 710 GVANALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGT 768
V A+ + H+ ++HRDI +N+L+D N E + DFG + + +T+F GT
Sbjct: 119 -VLEAVRHCHNX---GVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGT 172
Query: 769 FGYAAPE-IAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y+ PE I Y V+S G+L+++++ G+ P
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V +++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+ + T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDSELKILDFGLCRHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 120
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------------RRIGRFSEPHARFYA 168
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V + WT GT
Sbjct: 169 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGATWT-LCGT 222
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 30/236 (12%)
Query: 578 RLLSVLNFDGKIMHEEIIKATDDFDEKFC--IGKGGQGSVYKAELPSGDIVAVKKFNSQL 635
+++ VL DGK + I T+ C IG G G V++A+L D VA+KK
Sbjct: 23 KVIKVLASDGKTGEQREIAYTN------CKVIGNGSFGVVFQAKLVESDEVAIKKV---- 72
Query: 636 LSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCY-NGPHSF-----LVCEYLDRGSLARI 689
+ D E+ ++ ++H N V F Y NG LV EY+ ++ R
Sbjct: 73 ----LQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRA 127
Query: 690 LGDDVTAKELGWNRRINV-IKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEA-HVS 747
K+ I + + + +L+Y+H I HRDI +N+LLD +
Sbjct: 128 SRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLI 184
Query: 748 DFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY-TMRATEKYDVYSFGVLVFEVIKGN 802
DFG AK + N + + Y APE+ + T D++S G ++ E+++G
Sbjct: 185 DFGSAKILIAGEPNVSXICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEK 785
II+RD+ NV+LDS ++DFG+ K F GT Y APEI +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 786 YDVYSFGVLVFEVIKGNHP 804
D ++FGVL++E++ G P
Sbjct: 523 VDWWAFGVLLYEMLAGQAP 541
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 19/192 (9%)
Query: 622 SGDIVAVKKFNSQLLSGNM--ADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCE 679
+G A K + LS + +E EV L+EIRH N + H N L+ E
Sbjct: 29 TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE 88
Query: 680 YLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNV-LL 738
+ G L L + + E + +K + + + YLH I H D+ +N+ LL
Sbjct: 89 LVSGGELFDFLAEKESLTE---DEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLL 142
Query: 739 DSNF---EAHVSDFGIAKFVGPHSSNWTEFAGTFG---YAAPEIAYTMRATEKYDVYSFG 792
D N + DFGIA + EF FG + APEI + D++S G
Sbjct: 143 DKNVPNPRIKLIDFGIAHKI----EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 198
Query: 793 VLVFEVIKGNHP 804
V+ + ++ G P
Sbjct: 199 VITYILLSGASP 210
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 100/233 (42%), Gaps = 49/233 (21%)
Query: 600 DFDEKFCIGKGGQGSVYKAE-LPSGDIVAVK--KFNSQLLSGNMADHDEFLNEVLALKEI 656
DF E IG GG G V+KA+ G ++ K+N++ EV AL ++
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE----------REVKALAKL 62
Query: 657 RHRNNVKFHGFCYNG----PHS--------------------------FLVCEYLDRGSL 686
H N V ++G C++G P + F+ E+ D+G+L
Sbjct: 63 DHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTL 121
Query: 687 ARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHV 746
+ + + ++L + + + + + Y+H +IHRD+ N+ L + +
Sbjct: 122 EQWI-EKRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKI 177
Query: 747 SDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
DFG+ + + T GT Y +PE + ++ D+Y+ G+++ E++
Sbjct: 178 GDFGLVTSL-KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 644 DEFLNEVLALKEIRHRNNVKFHGFCY--NGPHSFLVCEYLDRGSLARILGDDVTAKELGW 701
++ E+ LK++ H N VK N H ++V E +++G + + T K L
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV----PTLKPLSE 136
Query: 702 NRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN 761
++ + + + YLH+ IIHRDI N+L+ + ++DFG++ +
Sbjct: 137 DQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 762 WTEFAGTFGYAAPEIAYTMR---ATEKYDVYSFGVLVFEVIKGNHP 804
+ GT + APE R + + DV++ GV ++ + G P
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEK 785
II+RD+ NV+LDS ++DFG+ K F GT Y APEI +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 786 YDVYSFGVLVFEVIKGNHP 804
D ++FGVL++E++ G P
Sbjct: 202 VDWWAFGVLLYEMLAGQAP 220
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 22/214 (10%)
Query: 599 DDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
+DFD +GKG G V E +G A+K +++ DE + V E R
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----DEVAHTV---TESR 57
Query: 658 HRNNVKFHGFCYNGPHSF-------LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKG 710
N + H F ++F V EY + G L L + E R
Sbjct: 58 VLQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE---ERARFYGAE 113
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG 770
+ +AL YLH +++RDI +N++LD + ++DFG+ K + F GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APE+ D + GV+++E++ G P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 28/208 (13%)
Query: 607 IGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G+G G V++ + +G AVKK ++ + E++A + V +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR---------VEELVACAGLSSPRIVPLY 116
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGW---NRRINVIKGVANALSYLHHDC 722
G GP + E L+ GSL +++ K++G +R + + L YLH
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLI------KQMGCLPEDRALYYLGQALEGLEYLHTR- 169
Query: 723 LPSIIHRDISSKNVLLDSN-FEAHVSDFGIAKFVGPHSSNWTEFAGTF-----GYAAPEI 776
I+H D+ + NVLL S+ A + DFG A + P + G + + APE+
Sbjct: 170 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 777 AYTMRATEKYDVYSFGVLVFEVIKGNHP 804
K D++S ++ ++ G HP
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 648 NEVLALKEIRHRNNVKFHGFCYNGPHS--FLVCEYLDRGSLARILGDDVTAKELGWNRRI 705
E+ L+ +RH+N ++ YN ++V EY G + +L D V K +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEML-DSVPEKRFPVCQAH 112
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWT-- 763
+ + L YLH I+H+DI N+LL + +S G+A+ + P +++ T
Sbjct: 113 GYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 764 EFAGTFGYAAPEIAYTMRATE--KYDVYSFGVLVFEVIKGNHP 804
G+ + PEIA + K D++S GV ++ + G +P
Sbjct: 170 TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGXVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 23/225 (10%)
Query: 585 FDGKIMHEEIIKATDDFDEKFCIGKG--GQGSVYKAELPSGDIVAVKKFNSQLLSGNMAD 642
D IMH+ +D +D IG G G + + +L + ++VAVK + A
Sbjct: 11 LDMPIMHD-----SDRYDFVKDIGSGNFGVARLMRDKL-TKELVAVK-----YIERGAAI 59
Query: 643 HDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWN 702
+ E++ + +RH N V+F H ++ EY G L + A +
Sbjct: 60 DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI---CNAGRFSED 116
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAH--VSDFGIAKFVGPHSS 760
+ + + +SY H I HRD+ +N LLD + + DFG +K HS
Sbjct: 117 EARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 173
Query: 761 NWTEFAGTFGYAAPEIAYTMRATEKY-DVYSFGVLVFEVIKGNHP 804
+ GT Y APE+ K DV+S GV ++ ++ G +P
Sbjct: 174 PKST-VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 28/208 (13%)
Query: 607 IGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G+G G V++ + +G AVKK ++ + E++A + V +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR---------VEELVACAGLSSPRIVPLY 132
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGW---NRRINVIKGVANALSYLHHDC 722
G GP + E L+ GSL +++ K++G +R + + L YLH
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLI------KQMGCLPEDRALYYLGQALEGLEYLHTR- 185
Query: 723 LPSIIHRDISSKNVLLDSN-FEAHVSDFGIAKFVGPHSSNWTEFAGTF-----GYAAPEI 776
I+H D+ + NVLL S+ A + DFG A + P + G + + APE+
Sbjct: 186 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 777 AYTMRATEKYDVYSFGVLVFEVIKGNHP 804
K D++S ++ ++ G HP
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV + ++ SG +AVKK + S A E+ LK ++H N +
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 113
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 114 GLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 172
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ T + T Y APEI M
Sbjct: 173 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 227
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
D++S G ++ E++ G
Sbjct: 228 HYNMTVDIWSVGCIMAELLTGR 249
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 91/229 (39%), Gaps = 13/229 (5%)
Query: 160 HNNLHGSIPS-SLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSEN-QFSGSIPL 217
H N +P+ S NL +L+L+ N L+ + L L QLDLS+N Q P
Sbjct: 40 HGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPA 99
Query: 218 SLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLY 277
+ L L + L L P + L +L L L N L + +L +L L+
Sbjct: 100 TFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLF 159
Query: 278 LYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIE------RVLLNQNNLSGKMYE 331
L+ N + L SL L L N + V PH+ + L NNLS E
Sbjct: 160 LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTE 219
Query: 332 AFGDHPNLTFLDLSNNNFCGEISFN--WGNFSKLSTFIVSMNNISGSIP 378
A L +L L++N + + W K F S + + S+P
Sbjct: 220 ALAPLRALQYLRLNDNPWVCDCRARPLWAWLQK---FRGSSSEVPCSLP 265
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 1/208 (0%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+G + Q + L N++S + L L+L N L L+L+++L L
Sbjct: 28 VGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDL 87
Query: 159 CHN-NLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPL 217
N L P++ L L L+L + L P + L +L L L +N
Sbjct: 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD 147
Query: 218 SLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLY 277
+ +L +LT + L N +S L SL L LH N++ P + +L L LY
Sbjct: 148 TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 207
Query: 278 LYNNGLYGFVPEEIGYLKSLSELELCTN 305
L+ N L E + L++L L L N
Sbjct: 208 LFANNLSALPTEALAPLRALQYLRLNDN 235
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 429 FGSLTKLQYLDLSTN-KLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELD 487
F L L+ LDLS N +L S P + L +LH L+L L P F L L L
Sbjct: 76 FTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135
Query: 488 LSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIPN 547
L N LQ ++G+L L L N +S R F + SL + + N + P+
Sbjct: 136 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPH 195
Query: 548 STAFKD 553
AF+D
Sbjct: 196 --AFRD 199
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 600 DFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
DFD +GKG G V E +G A+K +++ DE + V E R
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----DEVAHTV---TESRV 58
Query: 659 RNNVKFHGFCYNGPHSF-------LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGV 711
N + H F ++F V EY + G L L + E R +
Sbjct: 59 LQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE---ERARFYGAEI 114
Query: 712 ANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGY 771
+AL YLH +++RDI +N++LD + ++DFG+ K + F GT Y
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
APE+ D + GV+++E++ G P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 72/164 (43%), Gaps = 19/164 (11%)
Query: 649 EVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI 708
EV LKEI+H N + H N L+ E + G L L + + E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFL 120
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPHSSNW-T 763
K + N + YLH I H D+ +N+ LLD N + DFG+A H ++
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 172
Query: 764 EFAGTFG---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EF FG + APEI + D++S GV+ + ++ G P
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 72/164 (43%), Gaps = 19/164 (11%)
Query: 649 EVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI 708
EV LKEI+H N + H N L+ E + G L L + + E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFL 120
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPHSSNW-T 763
K + N + YLH I H D+ +N+ LLD N + DFG+A H ++
Sbjct: 121 KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGN 172
Query: 764 EFAGTFG---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EF FG + APEI + D++S GV+ + ++ G P
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 91/229 (39%), Gaps = 13/229 (5%)
Query: 160 HNNLHGSIPS-SLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSEN-QFSGSIPL 217
H N +P+ S NL +L+L+ N L+ + L L QLDLS+N Q P
Sbjct: 39 HGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPA 98
Query: 218 SLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLY 277
+ L L + L L P + L +L L L N L + +L +L L+
Sbjct: 99 TFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLF 158
Query: 278 LYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIE------RVLLNQNNLSGKMYE 331
L+ N + L SL L L N + V PH+ + L NNLS E
Sbjct: 159 LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTE 218
Query: 332 AFGDHPNLTFLDLSNNNFCGEISFN--WGNFSKLSTFIVSMNNISGSIP 378
A L +L L++N + + W K F S + + S+P
Sbjct: 219 ALAPLRALQYLRLNDNPWVCDCRARPLWAWLQK---FRGSSSEVPCSLP 264
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 1/205 (0%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+G + Q + L N++S + L L+L N L L+L+++L L
Sbjct: 27 VGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDL 86
Query: 159 CHN-NLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPL 217
N L P++ L L L+L + L P + L +L L L +N
Sbjct: 87 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD 146
Query: 218 SLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLY 277
+ +L +LT + L N +S L SL L LH N++ P + +L L LY
Sbjct: 147 TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 206
Query: 278 LYNNGLYGFVPEEIGYLKSLSELEL 302
L+ N L E + L++L L L
Sbjct: 207 LFANNLSALPTEALAPLRALQYLRL 231
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 429 FGSLTKLQYLDLSTN-KLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELD 487
F L L+ LDLS N +L S P + L +LH L+L L P F L L L
Sbjct: 75 FTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 134
Query: 488 LSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIPN 547
L N LQ ++G+L L L N +S R F + SL + + N + P+
Sbjct: 135 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPH 194
Query: 548 STAFKD 553
AF+D
Sbjct: 195 --AFRD 198
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 107
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 108 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 166
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DFG+A+ + T Y APEI M
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---YVATRWYRAPEIMLNWM 221
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 20/192 (10%)
Query: 160 HNNLHGSIPS-SLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSEN-QFSGSIPL 217
H N +P+ S + NL +L+L+ N+L+G + L L QLDLS+N Q P
Sbjct: 39 HGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPT 98
Query: 218 SLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLY 277
+ L L + L L P + L +L L L N L + +L +L L+
Sbjct: 99 TFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLF 158
Query: 278 LYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHP 337
L+ N + VPE RG+ HS++R+LL+QN+++ AF D
Sbjct: 159 LHGNRIPS-VPEHA---------------FRGL--HSLDRLLLHQNHVARVHPHAFRDLG 200
Query: 338 NLTFLDLSNNNF 349
L L L NN
Sbjct: 201 RLMTLYLFANNL 212
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 1/198 (0%)
Query: 106 QYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN-NLH 164
Q + L N++S + L L+L N L G L+L+++L L N L
Sbjct: 34 QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLR 93
Query: 165 GSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSS 224
P++ L +L L+L + L P + L +L L L +N + +L +
Sbjct: 94 VVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGN 153
Query: 225 LTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLY 284
LT + L N + L SL L LH N + P + +L L LYL+ N L
Sbjct: 154 LTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS 213
Query: 285 GFVPEEIGYLKSLSELEL 302
E + L+SL L L
Sbjct: 214 MLPAEVLVPLRSLQYLRL 231
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%)
Query: 102 LSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161
L+ LQYL L N L L L L L+L N++ L +D+L L N
Sbjct: 127 LAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQN 186
Query: 162 NLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQF 211
++ P + +L L LYL+ N+LS ++ L+SL L L++N +
Sbjct: 187 HVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDNPW 236
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 90/230 (39%), Gaps = 25/230 (10%)
Query: 311 IPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSM 370
IP S +R+ L+ N +S +F NLT L L +N G + + + L
Sbjct: 29 IPASSQRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQL---- 84
Query: 371 NNISGSIPPDIGNSPKLQVLDLSSNHIVGKI-PVQLEMXXXXXXXXXXXXXXXGGVPLEF 429
D+ ++ +L+V+D ++ +G + + L+ P F
Sbjct: 85 ---------DLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELG-----------PGLF 124
Query: 430 GSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLS 489
L LQYL L N L + + +L L +L L N++ F L L L L
Sbjct: 125 RGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLH 184
Query: 490 HNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYN 539
N + P ++G L L L NNLS +RSL + ++ N
Sbjct: 185 QNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 234
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 76/193 (39%), Gaps = 19/193 (9%)
Query: 206 LSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHIN-QLNGFIP 264
L N+ S S + +LT++ L +N+L+G L L L L N QL P
Sbjct: 38 LHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDP 97
Query: 265 PSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNN 324
+ L L L+L GL +E+G L RG+ +++ + L NN
Sbjct: 98 TTFRGLGHLHTLHLDRCGL-----QELG-----------PGLFRGLA--ALQYLYLQDNN 139
Query: 325 LSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNS 384
L F D NLT L L N + L ++ N+++ P +
Sbjct: 140 LQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDL 199
Query: 385 PKLQVLDLSSNHI 397
+L L L +N++
Sbjct: 200 GRLMTLYLFANNL 212
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 22/214 (10%)
Query: 599 DDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
+DFD +GKG G V E +G A+K +++ DE + V E R
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----DEVAHTV---TESR 57
Query: 658 HRNNVKFHGFCYNGPHSF-------LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKG 710
N + H F ++F V EY + G L L + E R
Sbjct: 58 VLQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE---ERARFYGAE 113
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG 770
+ +AL YLH +++RDI +N++LD + ++DFG+ K + F GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APE+ D + GV+++E++ G P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 600 DFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
DFD +GKG G V E +G A+K +++ DE + V E R
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----DEVAHTV---TESRV 63
Query: 659 RNNVKFHGFCYNGPHSF-------LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGV 711
N + H F ++F V EY + G L L + E R +
Sbjct: 64 LQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE---ERARFYGAEI 119
Query: 712 ANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGY 771
+AL YLH +++RDI +N++LD + ++DFG+ K + F GT Y
Sbjct: 120 VSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEY 176
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
APE+ D + GV+++E++ G P
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 600 DFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
DFD +GKG G V E +G A+K +++ DE + V E R
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----DEVAHTV---TESRV 58
Query: 659 RNNVKFHGFCYNGPHSF-------LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGV 711
N + H F ++F V EY + G L L + E R +
Sbjct: 59 LQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE---ERARFYGAEI 114
Query: 712 ANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGY 771
+AL YLH +++RDI +N++LD + ++DFG+ K + F GT Y
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
APE+ D + GV+++E++ G P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 90/214 (42%), Gaps = 22/214 (10%)
Query: 599 DDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
+DFD +GKG G V E +G A+K +++ DE + V E R
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----DEVAHTV---TESR 60
Query: 658 HRNNVKFHGFCYNGPHSF-------LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKG 710
N + H F ++F V EY + G L L + E R
Sbjct: 61 VLQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE---ERARFYGAE 116
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG 770
+ +AL YLH +++RDI +N++LD + ++DFG+ K + F GT
Sbjct: 117 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 173
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APE+ D + GV+++E++ G P
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 28/208 (13%)
Query: 607 IGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G+G G V++ + +G AVKK ++ + E++A + V +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR---------VEELVACAGLSSPRIVPLY 130
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGW---NRRINVIKGVANALSYLHHDC 722
G GP + E L+ GSL +++ K++G +R + + L YLH
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLI------KQMGCLPEDRALYYLGQALEGLEYLHTR- 183
Query: 723 LPSIIHRDISSKNVLLDSN-FEAHVSDFGIAKFVGPHSSNWTEFAGTF-----GYAAPEI 776
I+H D+ + NVLL S+ A + DFG A + P + G + + APE+
Sbjct: 184 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 777 AYTMRATEKYDVYSFGVLVFEVIKGNHP 804
K D++S ++ ++ G HP
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 17/169 (10%)
Query: 643 HDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWN 702
+E EV L+EIRH N + H N L+ E + G L L + + E +
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE---D 129
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPH 758
+K + + + YLH I H D+ +N+ LLD N + DFGIA +
Sbjct: 130 EATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--- 183
Query: 759 SSNWTEFAGTFG---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EF FG + APEI + D++S GV+ + ++ G P
Sbjct: 184 -EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 600 DFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
DFD +GKG G V E +G A+K +++ DE + V E R
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----DEVAHTV---TESRV 58
Query: 659 RNNVKFHGFCYNGPHSF-------LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGV 711
N + H F ++F V EY + G L L + E R +
Sbjct: 59 LQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE---ERARFYGAEI 114
Query: 712 ANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGY 771
+AL YLH +++RDI +N++LD + ++DFG+ K + F GT Y
Sbjct: 115 VSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 772 AAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
APE+ D + GV+++E++ G P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 34/240 (14%)
Query: 583 LNFDGKIMHEEIIKATDDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMA 641
L F G + E+ DD + +G+G G V K +PSG I AVK+ + + N
Sbjct: 20 LYFQGAXENFEV--KADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATV---NSQ 74
Query: 642 DHDEFLNEV-LALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARIL------GDDV 694
+ L ++ ++ + + V F+G + + +C L SL + G +
Sbjct: 75 EQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVW-ICXELXDTSLDKFYKQVIDKGQTI 133
Query: 695 TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754
LG + + AL +LH S+IHRD+ NVL+++ + DFGI+ +
Sbjct: 134 PEDILG-----KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGY 186
Query: 755 VGPHSSNWTEFAGTFGYAAPE--------IAYTMRATEKYDVYSFGVLVFEVIKGNHPRD 806
+ + + AG Y APE Y++++ D++S G+ E+ P D
Sbjct: 187 LVDDVAKDID-AGCKPYXAPERINPELNQKGYSVKS----DIWSLGITXIELAILRFPYD 241
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + DF +A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFYLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 647 LNEVLALKEIR-HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRI 705
L EV L+++ H N ++ FLV + + +G L L + VT E + +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEF 765
+ V AL L +I+HRD+ +N+LLD + ++DFG + + P
Sbjct: 131 RALLEVICALHKL------NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLRSV 183
Query: 766 AGTFGYAAPEIAYTMRAT------EKYDVYSFGVLVFEVIKGNHP 804
GT Y APEI ++ D++S GV+++ ++ G+ P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 2/156 (1%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
I L ++YL LG N+L + + +L L L L NQL +L+ + +L L
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
N L L+NL LYLY N L + KL +L +LDL NQ
Sbjct: 117 VENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGV 176
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGL 254
L+ L +SL +N L + L SL+ + L
Sbjct: 177 FDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIWL 212
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 60/145 (41%)
Query: 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158
+ L+ L YL L NQL L KL L+ L L NQL +L+ + L L
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYL 140
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
HN L L+NL L L N L + KL L QL L++NQ
Sbjct: 141 YHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDGV 200
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPIL 243
L+SLT + L NN + IL
Sbjct: 201 FDRLTSLTHIWLLNNPWDCACSDIL 225
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 156 LALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSI 215
LAL N LH S+L L+NL L L N L + KL +L +L L ENQ
Sbjct: 68 LALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLP 125
Query: 216 PLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRV 275
L++LT + L++N L + L +L+ L L NQL L+ L+
Sbjct: 126 DGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQ 185
Query: 276 LYLYNNGLYGFVPEEIGYLKSLSELELCTN 305
L L +N L L SL+ + L N
Sbjct: 186 LSLNDNQLKSVPDGVFDRLTSLTHIWLLNN 215
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 429 FGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDL 488
F LT L+ L L N+L S L L YL L +NQL F+KL +L+ LDL
Sbjct: 105 FDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDL 164
Query: 489 SHNILQEEIPPQVCN-MGSLEKLNLSHNNLSDFIPRCFEEMRSLSCI 534
+N LQ +P V + + L++L+L+ N L F+ + SL+ I
Sbjct: 165 DNNQLQ-SLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHI 210
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 432 LTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHN 491
L ++YL L NKL ++ L L YL L+ NQL F+KL +L EL L N
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN 119
Query: 492 ILQEEIPPQVCN-MGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIPNSTA 550
LQ +P V + + +L L L HN L F+++ +L+ +D+ N+L +
Sbjct: 120 QLQ-SLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-------S 171
Query: 551 FKDGLMEGNKGLKRVS 566
+G+ + LK++S
Sbjct: 172 LPEGVFDKLTQLKQLS 187
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 432 LTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHN 491
LT L YL L+ N+L S L L L L NQL F+KL +L+ L L HN
Sbjct: 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHN 143
Query: 492 ILQEEIPPQVCN-MGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHG 543
LQ +P V + + +L +L+L +N L F+++ L + ++ N+L
Sbjct: 144 QLQ-SLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKS 195
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Query: 218 SLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLY 277
+L L++LT + L N L + L +L L L NQL L++L LY
Sbjct: 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLY 139
Query: 278 LYNNGLYGFVPEEIGYLKSLSELELCTNLLR----GVIPH--SIERVLLNQNNLSGKMYE 331
LY+N L L +L+ L+L N L+ GV ++++ LN N L
Sbjct: 140 LYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDG 199
Query: 332 AFGDHPNLTFLDLSNNNF---CGEISF 355
F +LT + L NN + C +I +
Sbjct: 200 VFDRLTSLTHIWLLNNPWDCACSDILY 226
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 429 FGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDL 488
F LT L LDL N+L S L +L L+L++NQL F++L L+ + L
Sbjct: 153 FDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIWL 212
Query: 489 SHN 491
+N
Sbjct: 213 LNN 215
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 104
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 163
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG---TFGYAAPEIAY 778
IIHRD+ N+ ++ + E + DFG+A+ H+ + E G T Y APEI
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDD--EMXGXVATRWYRAPEIML 215
Query: 779 T-MRATEKYDVYSFGVLVFEVIKGN 802
M + D++S G ++ E++ G
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 588 KIMHEEIIKATDDFDEKFCIGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEF 646
+I H+ ++ D +D +G G G V++ E +G+ A K +++ + +D +
Sbjct: 149 EIKHDHVL---DHYDIHEELGTGAFGVVHRVTERATGNNFAAK----FVMTPHESDKETV 201
Query: 647 LNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN 706
E+ + +RH V H + ++ E++ G L + D+ ++ + +
Sbjct: 202 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE--HNKMSEDEAVE 259
Query: 707 VIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF--EAHVSDFGIAKFVGPHSSNWTE 764
++ V L ++H + + +H D+ +N++ + E + DFG+ + P S
Sbjct: 260 YMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT 316
Query: 765 FAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
GT +AAPE+A D++S GVL + ++ G P
Sbjct: 317 -TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + FG+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILGFGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 588 KIMHEEIIKATDDFDEKFCIGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEF 646
+I H+ ++ D +D +G G G V++ E +G+ A K +++ + +D +
Sbjct: 43 EIKHDHVL---DHYDIHEELGTGAFGVVHRVTERATGNNFAAK----FVMTPHESDKETV 95
Query: 647 LNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN 706
E+ + +RH V H + ++ E++ G L + D+ ++ + +
Sbjct: 96 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE--HNKMSEDEAVE 153
Query: 707 VIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF--EAHVSDFGIAKFVGPHSSNWTE 764
++ V L ++H + + +H D+ +N++ + E + DFG+ + P S
Sbjct: 154 YMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT 210
Query: 765 FAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
GT +AAPE+A D++S GVL + ++ G P
Sbjct: 211 -TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 23/204 (11%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKF- 664
IG G QG V A + G VAVKK + N E++ LK + H+N +
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPF--QNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 665 -----HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH 719
+LV E +D +L +++ EL R ++ + + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIH-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNW--TEFAGTFGYAAPEIA 777
IIHRD+ N+++ S+ + DFG+A+ +N+ T + T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---CTNFMMTPYVVTRYYRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVIKG 801
M D++S G ++ E++KG
Sbjct: 198 LGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 89/216 (41%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------------RRIGRFSEPHARFYA 147
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W AGT
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LAGT 201
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D F+ +G G G V + + +G+ A+K + Q + + + LNE L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 100
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------------RRIGRFSEPHARFYA 148
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V WT GT
Sbjct: 149 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWT-LCGT 202
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + D G+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDAGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D F+ +G G G V + + +G+ A+K + Q + + + LNE L+ +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 85
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------------RRIGRFSEPHARFYA 133
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V WT GT
Sbjct: 134 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWT-LCGT 187
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 188 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLL-SGNMADHDE-FLNEVLALKEI-RHRNNV 662
+G G G V +A G AV K ++L S AD E ++E+ + + +H N V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILG--------------------DDVTAKELGWN 702
G C +G ++ EY G L L D + L
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNW 762
++ VA +++L + IHRD++++NVLL + A + DFG+A+ + + SN+
Sbjct: 159 DLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDI-MNDSNY 214
Query: 763 TEFAGT---FGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ APE + T + DV+S+G+L++E+
Sbjct: 215 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 254
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + D G+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDRGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 168/420 (40%), Gaps = 52/420 (12%)
Query: 153 IDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFS 212
I L L HN L P++ S LA+L NS+S P + L L L+L N+ S
Sbjct: 27 ITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELS 86
Query: 213 GSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSS 272
+ ++LT + L +NS+ N K+L L L N L+ + L +
Sbjct: 87 QISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLEN 146
Query: 273 LRVLYLYNNGLYGFVPEEIGYL--KSLSELELCTNLLRGVIPHSIERV------LLNQNN 324
L+ L L N + EE+ +L SL +L+L +N L+ P + + LLN
Sbjct: 147 LQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQ 206
Query: 325 LSGKMYEAFG---DHPNLTFLDLSNNNFCG--EISFNWGNFSKLSTFIVSMNNISGSIPP 379
L+ + E + ++ L L+NN E +F+ ++ L+ +S NN+
Sbjct: 207 LNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLH----- 261
Query: 380 DIGNS-----PKLQVLDLSSNHIVGKIPVQLEMXXXXXXXXXXXXXXXGGVPL------- 427
D+GN P L+ L L N+I P V L
Sbjct: 262 DVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNID 321
Query: 428 --EFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSE 485
F L L+YL++ N + S+ + L+ L YL+LS K T + L + +
Sbjct: 322 DFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLS------KTFTSLQTLTNETF 375
Query: 486 LDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPI 545
+ L+H L LNL+ N++S F + L +D+ NE+ +
Sbjct: 376 VSLAH--------------SPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKL 421
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 197/494 (39%), Gaps = 77/494 (15%)
Query: 96 PLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDK 155
P S+L LD G N +S L P L L+ L L N+L + + +
Sbjct: 42 PTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLTE 101
Query: 156 LALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGS----------------IPSIIGKLK 199
L L N++H + N NL L L N LS + + I L+
Sbjct: 102 LDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALR 161
Query: 200 ----------SLLQLDLSEN---QFSGSIPLSLGNLSSLTM-MSLFNNSLSGSIPPILGN 245
SL +LDLS N +FS ++G L +L + + N L+ + L N
Sbjct: 162 SEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSN 221
Query: 246 LKSLSALGLHINQLNGFIPPSIGNL--SSLRVLYLYNNGLYGFVPEEIGYLKSLSELELC 303
S+ L L NQL + L ++L L L N L+ YL SL L L
Sbjct: 222 -TSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLE 280
Query: 304 TNLLRGVIPHSIERV----LLNQNNLSGKMYEAFGDHPN-----------LTFLDLSNNN 348
N ++ + P S + L+ K + HPN L +L++ +NN
Sbjct: 281 YNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNN 340
Query: 349 --------FCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHI--- 397
F G +S + + SK T S+ ++ + +SP L L+L+ NHI
Sbjct: 341 IPSTKSNTFTGLVSLKYLSLSKTFT---SLQTLTNETFVSLAHSP-LLTLNLTKNHISKI 396
Query: 398 -------VGKIPVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTNKLSSSIP 450
+G++ + L++ G + L+ +YL LST+ S ++
Sbjct: 397 ANGTFSWLGQLRI-LDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTS--SFALV 453
Query: 451 KSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKL 510
S+ L+ L + L N +S P+ F L +L+ LDLS+N + + + +LE L
Sbjct: 454 PSLQRLM-LRRVALKNVDIS---PSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEIL 509
Query: 511 NLSHNNLSDFIPRC 524
+ HNNL+ R
Sbjct: 510 DFQHNNLARLWKRA 523
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 427 LEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKL------ 480
LEF + L+ LDLS+N L P + KL L L+N QL+ P EKL
Sbjct: 165 LEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLN---PHLTEKLCWELSN 221
Query: 481 IHLSELDLSHNIL--QEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISY 538
+ L L++N L E +L +L+LS+NNL D F + SL + + Y
Sbjct: 222 TSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEY 281
Query: 539 NELHGPIPNS 548
N + P S
Sbjct: 282 NNIQRLSPRS 291
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 36/201 (17%)
Query: 338 NLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHI 397
N+T L+L++N N+ +S+L+ N+IS P P L+VL+L N +
Sbjct: 26 NITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNEL 85
Query: 398 VGKIPVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLSTN---KLSSSIPKSIG 454
+I Q F T L LDL +N K+ S+ K+
Sbjct: 86 -SQISDQ-----------------------TFVFCTNLTELDLMSNSIHKIKSNPFKNQK 121
Query: 455 NLLKLHYLNLSNNQLSH-KIPTEFEKLIHLSELDLSHNIL---QEEIPPQVCNMGSLEKL 510
NL+KL +LS+N LS K+ T + L + IL EE+ + SL KL
Sbjct: 122 NLIKL---DLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEEL--EFLGNSSLRKL 176
Query: 511 NLSHNNLSDFIPRCFEEMRSL 531
+LS N L +F P CF+ + L
Sbjct: 177 DLSSNPLKEFSPGCFQTIGKL 197
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK +L G + E+ ++++ H N V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK----VLQGKAFKN----RELQIMRKLDHCNIVRLR 79
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 194
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG 770
+ +AL YLH + ++++RD+ +N++LD + ++DFG+ K + F GT
Sbjct: 117 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 174
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APE+ D + GV+++E++ G P
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG 770
+ +AL YLH + ++++RD+ +N++LD + ++DFG+ K + F GT
Sbjct: 260 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE 317
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APE+ D + GV+++E++ G P
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG 770
+ +AL YLH + ++++RD+ +N++LD + ++DFG+ K + F GT
Sbjct: 119 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 176
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APE+ D + GV+++E++ G P
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG 770
+ +AL YLH + ++++RD+ +N++LD + ++DFG+ K + F GT
Sbjct: 118 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 175
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APE+ D + GV+++E++ G P
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFG 770
+ +AL YLH + ++++RD+ +N++LD + ++DFG+ K + F GT
Sbjct: 257 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE 314
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APE+ D + GV+++E++ G P
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 429 FGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDL 488
F LT L+ L L N+L S L L YLNL++NQL F+KL +L+ELDL
Sbjct: 105 FDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164
Query: 489 SHNILQEEIPPQVCN-MGSLEKLNLSHNNLSDFIPRCFEEMRSLSCI 534
S+N LQ +P V + + L+ L L N L F+ + SL I
Sbjct: 165 SYNQLQ-SLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYI 210
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 432 LTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHN 491
L ++YL L NKL ++ L L YL L+ NQL F+KL +L EL L N
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN 119
Query: 492 ILQEEIPPQVCN-MGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELH 542
LQ +P V + + +L LNL+HN L F+++ +L+ +D+SYN+L
Sbjct: 120 QLQS-LPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ 170
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Query: 156 LALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSI 215
LAL N LH S+L L+NL L L N L + KL +L +L L ENQ
Sbjct: 68 LALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLP 125
Query: 216 PLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRV 275
L++LT ++L +N L + L +L+ L L NQL L+ L+
Sbjct: 126 DGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKD 185
Query: 276 LYLYNNGLYGFVPEEIGYLKSLSELE 301
L LY N L VP+ G L+ L+
Sbjct: 186 LRLYQNQLKS-VPD--GVFDRLTSLQ 208
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 68/170 (40%), Gaps = 7/170 (4%)
Query: 102 LSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161
L+ L YL L NQL L KL L+ L L NQL +L+ + L L HN
Sbjct: 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHN 143
Query: 162 NLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGN 221
L L+NL L L N L + KL L L L +NQ
Sbjct: 144 QLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDR 203
Query: 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLS 271
L+SL + L +N + P I L IN+ +G + S G+++
Sbjct: 204 LTSLQYIWLHDNPWDCTCPGI-------RYLSEWINKHSGVVRNSAGSVA 246
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 432 LTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHN 491
LT L YL L+ N+L S L L L L NQL F+KL +L+ L+L+HN
Sbjct: 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHN 143
Query: 492 ILQEEIPPQVCN-MGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNEL 541
LQ +P V + + +L +L+LS+N L F+++ L + + N+L
Sbjct: 144 QLQ-SLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G GSV A + +G VAVKK + S A E+ LK ++H N +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVI--- 84
Query: 666 GFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLHHD 721
G + + E+ D + ++G D V ++L + +I + L Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-M 780
IIHRD+ N+ ++ + E + D G+A+ T + T Y APEI M
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDGGLARHT---DDEMTGYVATRWYRAPEIMLNWM 198
Query: 781 RATEKYDVYSFGVLVFEVIKGN 802
+ D++S G ++ E++ G
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLL---SGNMADHDEFLNEVLALKE 655
D +D +G G V K S + KF + S ++ EV LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
I+H N + H N L+ E + G L L + + E +K + N +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGV 127
Query: 716 SYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPHSSNW-TEFAGTFG 770
YLH I H D+ +N+ LLD N + DFG+A H ++ EF FG
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFG 179
Query: 771 ---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ APEI + D++S GV+ + ++ G P
Sbjct: 180 TPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 16/137 (11%)
Query: 675 FLVCEYLDRGSL-ARI--LGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
+V E LD G L +RI GD T +E ++K + A+ YLH +I HRD
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHSI---NIAHRD 140
Query: 731 ISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYD 787
+ +N+L S N ++DFG AK H+S TE T Y APE+ + + D
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEPCYTPYYVAPEVLGPEKYDKSCD 199
Query: 788 VYSFGVLVFEVIKGNHP 804
++S GV+++ ++ G P
Sbjct: 200 MWSLGVIMYILLCGYPP 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLL---SGNMADHDEFLNEVLALKE 655
D +D +G G V K S + KF + S ++ EV LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
I+H N + H N L+ E + G L L + + E +K + N +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGV 127
Query: 716 SYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPHSSNW-TEFAGTFG 770
YLH I H D+ +N+ LLD N + DFG+A H ++ EF FG
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFG 179
Query: 771 ---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ APEI + D++S GV+ + ++ G P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 20/219 (9%)
Query: 596 KATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKF---NSQLLSGNMADHDEFLNEVLA 652
K D +D +G G V K S + KF S +E EV
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 653 LKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVA 712
L+++ H N + H N L+ E + G L L + L + IK +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQIL 125
Query: 713 NALSYLHHDCLPSIIHRDISSKNV-LLDSNFEA-HVS--DFGIAKFVGPHSSNWTEFAGT 768
+ ++YLH I H D+ +N+ LLD N H+ DFG+A + + EF
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI----EDGVEFKNI 178
Query: 769 FG---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
FG + APEI + D++S GV+ + ++ G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 120
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVIKGVANA 714
VK + + ++V EY+ G + R +G + +I +
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL------T 174
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y AP
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLAP 228
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EI + + D ++ GVL++E+ G P
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 20/219 (9%)
Query: 596 KATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKF---NSQLLSGNMADHDEFLNEVLA 652
K D +D +G G V K S + KF S +E EV
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 653 LKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVA 712
L+++ H N + H N L+ E + G L L + L + IK +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQIL 125
Query: 713 NALSYLHHDCLPSIIHRDISSKNV-LLDSNFEA-HVS--DFGIAKFVGPHSSNWTEFAGT 768
+ ++YLH I H D+ +N+ LLD N H+ DFG+A + + EF
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI----EDGVEFKNI 178
Query: 769 FG---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
FG + APEI + D++S GV+ + ++ G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLL-SGNMADHDE-FLNEVLALKEI-RHRNNV 662
+G G G V +A G AV K ++L S AD E ++E+ + + +H N V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVT-------------AKELGWNRRINVIK 709
G C +G ++ EY G L L ++L ++
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 710 GVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT- 768
VA +++L + IHRD++++NVLL + A + DFG+A+ + + SN+
Sbjct: 174 QVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYIVKGNAR 229
Query: 769 --FGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ APE + T + DV+S+G+L++E+
Sbjct: 230 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 262
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 20/219 (9%)
Query: 596 KATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKF---NSQLLSGNMADHDEFLNEVLA 652
K D +D +G G V K S + KF S +E EV
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 653 LKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVA 712
L+++ H N + H N L+ E + G L L + L + IK +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQIL 125
Query: 713 NALSYLHHDCLPSIIHRDISSKNV-LLDSNFEA-HVS--DFGIAKFVGPHSSNWTEFAGT 768
+ ++YLH I H D+ +N+ LLD N H+ DFG+A + + EF
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI----EDGVEFKNI 178
Query: 769 FG---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
FG + APEI + D++S GV+ + ++ G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 88
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 146
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ E T Y APEI
Sbjct: 147 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 205
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 206 SKGYTKSIDIWSVGCILAEML-SNRP 230
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 18/206 (8%)
Query: 607 IGKGGQGSVYKAELPSGDI-VAVKK---FNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
IG+G G V A + VA+KK F Q L E+ L RH N +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT------LREIKILLRFRHENII 89
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
+ + Y+ + + L + + L + + + L Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-- 147
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP---HSSNWTEFAGTFGYAAPEIAYT 779
+++HRD+ N+LL++ + + DFG+A+ P H+ E T Y APEI
Sbjct: 148 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 206
Query: 780 MRA-TEKYDVYSFGVLVFEVIKGNHP 804
+ T+ D++S G ++ E++ N P
Sbjct: 207 SKGYTKSIDIWSVGCILAEML-SNRP 231
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 104/248 (41%), Gaps = 50/248 (20%)
Query: 604 KFCIGKGGQGSVYKA-ELPSGDIVAVKKFN-SQLLSGNMADHDEFLNEVLALKEIRHRNN 661
K IG+G G V A E + I A+K N +++ N D + EV +K++ H N
Sbjct: 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNI 90
Query: 662 VKFHGFCYNGPHSFLVCEYLDRGSLARILG---DDVTAK-----------------ELGW 701
+ + + + LV E G L L DD T K E
Sbjct: 91 ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAI 150
Query: 702 NRRI-----------------NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSN--F 742
N I N+++ + +AL YLH+ I HRDI +N L +N F
Sbjct: 151 NGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSF 207
Query: 743 EAHVSDFGIAK-FVGPHSSNW---TEFAGTFGYAAPEIAYTMRAT--EKYDVYSFGVLVF 796
E + DFG++K F ++ + T AGT + APE+ T + K D +S GVL+
Sbjct: 208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLH 267
Query: 797 EVIKGNHP 804
++ G P
Sbjct: 268 LLLMGAVP 275
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 23/202 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIG 92
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
++V E +D +L +++ EL R ++ + + +
Sbjct: 93 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 146
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 147 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 202
Query: 778 YTMRATEKYDVYSFGVLVFEVI 799
M E D++S G ++ E++
Sbjct: 203 LGMGYKENVDLWSVGCIMGEMV 224
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 20/219 (9%)
Query: 596 KATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKF---NSQLLSGNMADHDEFLNEVLA 652
K D +D +G G V K S + KF S +E EV
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 653 LKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVA 712
L+++ H N + H N L+ E + G L L + L + IK +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQIL 125
Query: 713 NALSYLHHDCLPSIIHRDISSKNV-LLDSNFEA-HVS--DFGIAKFVGPHSSNWTEFAGT 768
+ ++YLH I H D+ +N+ LLD N H+ DFG+A + + EF
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI----EDGVEFKNI 178
Query: 769 FG---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
FG + APEI + D++S GV+ + ++ G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 31/217 (14%)
Query: 607 IGKGGQGSVYKAE------LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHR 659
+G+G G V +A+ + VAVK ++H ++E+ L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 91
Query: 660 NNVKFHGFCYN--GPHSFLVCEYLDRGSLA-------------RILGDDVTAKELGWNRR 704
N V G C GP +V E+ G+L+ ++ +D+ L
Sbjct: 92 NVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNW 762
I VA + +L IHRD++++N+LL + DFG+A+ + P
Sbjct: 151 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK 207
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ + APE + T + DV+SFGVL++E+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 20/219 (9%)
Query: 596 KATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKF---NSQLLSGNMADHDEFLNEVLA 652
K D +D +G G V K S + KF S +E EV
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 653 LKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVA 712
L+++ H N + H N L+ E + G L L + L + IK +
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQIL 125
Query: 713 NALSYLHHDCLPSIIHRDISSKNV-LLDSNFEA-HVS--DFGIAKFVGPHSSNWTEFAGT 768
+ ++YLH I H D+ +N+ LLD N H+ DFG+A + + EF
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI----EDGVEFKNI 178
Query: 769 FG---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
FG + APEI + D++S GV+ + ++ G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 82/206 (39%), Gaps = 19/206 (9%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG+G +VYK L + V V Q ++ F E LK ++H N V+F+
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 667 F---CYNGPHSF-LVCEYLDRGSLARILGDDVTAKE---LGWNRRINVIKGVANALSYLH 719
G LV E G+L L K W R+I +KG L +LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI--LKG----LQFLH 146
Query: 720 HDCLPSIIHRDISSKNVLLDS-NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY 778
P IIHRD+ N+ + + D G+A +S GT + APE Y
Sbjct: 147 TR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL--KRASFAKAVIGTPEFXAPE-XY 202
Query: 779 TMRATEKYDVYSFGVLVFEVIKGNHP 804
+ E DVY+FG E +P
Sbjct: 203 EEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVIKGVANA 714
VK + + ++V EY+ G + R +G + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVL------T 153
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y AP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLAP 207
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EI + + D ++ GVL++E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLL---SGNMADHDEFLNEVLALKE 655
D +D +G G V K S + KF + S ++ EV LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
I+H N + H N L+ E + G L L + + E +K + N +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGV 127
Query: 716 SYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPHSSNW-TEFAGTFG 770
YLH I H D+ +N+ LLD N + DFG+A H ++ EF FG
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFG 179
Query: 771 ---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ APEI + D++S GV+ + ++ G P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLL---SGNMADHDEFLNEVLALKE 655
D +D +G G V K S + KF + S ++ EV LKE
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
I+H N + H N L+ E + G L L + + E +K + N +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGV 127
Query: 716 SYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPHSSNW-TEFAGTFG 770
YLH I H D+ +N+ LLD N + DFG+A H ++ EF FG
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFG 179
Query: 771 ---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ APEI + D++S GV+ + ++ G P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLL---SGNMADHDEFLNEVLALKE 655
D +D +G G V K S + KF + S ++ EV LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
I+H N + H N L+ E + G L L + + E +K + N +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGV 127
Query: 716 SYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPHSSNW-TEFAGTFG 770
YLH I H D+ +N+ LLD N + DFG+A H ++ EF FG
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFG 179
Query: 771 ---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ APEI + D++S GV+ + ++ G P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 99/240 (41%), Gaps = 25/240 (10%)
Query: 571 SNSMNRLRLLSVLNFDGKIMHEEIIKATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVK 629
S + L LL +FD D+++ IG G G V A +G VA+K
Sbjct: 33 SVAAKNLALLKARSFDV------TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIK 86
Query: 630 KFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFC-----YNGPHSFLVCEYLDRG 684
K + + + L E+ LK +H N + Y S V L
Sbjct: 87 KIPNAF--DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES 144
Query: 685 SLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEA 744
L +I+ +++ L + + L Y+H +IHRD+ N+L++ N E
Sbjct: 145 DLHQIIH---SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCEL 198
Query: 745 HVSDFGIAKFV----GPHSSNWTEFAGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVI 799
+ DFG+A+ + H TE+ T Y APE+ ++ T+ D++S G + E++
Sbjct: 199 KIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML 258
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 93/229 (40%), Gaps = 24/229 (10%)
Query: 587 GKIMHEEIIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLL---SGNMADH 643
G + +E + D +D +G G V K S + KF + S
Sbjct: 1 GTVFRQENV--DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSR 58
Query: 644 DEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNR 703
++ EV LKEI+H N + H N L+ E + G L L + + E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EE 115
Query: 704 RINVIKGVANALSYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPHS 759
+K + N + YLH I H D+ +N+ LLD N + DFG+A H
Sbjct: 116 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HK 167
Query: 760 SNW-TEFAGTFG---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
++ EF FG + APEI + D++S GV+ + ++ G P
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVIKGVANA 714
VK + + ++V EY+ G + R +G + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL------T 153
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y AP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLAP 207
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EI + + D ++ GVL++E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 23/202 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIG 81
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
++V E +D +L +++ EL R ++ + + +
Sbjct: 82 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 135
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G S T + T Y APE+
Sbjct: 136 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVI 191
Query: 778 YTMRATEKYDVYSFGVLVFEVI 799
M E D++S G ++ E++
Sbjct: 192 LGMGYKENVDLWSVGCIMGEMV 213
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 94
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVIKGVANA 714
VK + + ++V EY+ G + R +G + +I +
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL------T 148
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y AP
Sbjct: 149 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLAP 202
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EI + + D ++ GVL++E+ G P
Sbjct: 203 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLL---SGNMADHDEFLNEVLALKE 655
D +D +G G V K S + KF + S ++ EV LKE
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
I+H N + H N L+ E + G L L + + E +K + N +
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGV 126
Query: 716 SYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPHSSNW-TEFAGTFG 770
YLH I H D+ +N+ LLD N + DFG+A H ++ EF FG
Sbjct: 127 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFG 178
Query: 771 ---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ APEI + D++S GV+ + ++ G P
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 19/212 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D+++ IG G G V A +G VA+KK + + + L E+ LK +
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF--DVVTNAKRTLRELKILKHFK 111
Query: 658 HRNNVKFHGFC-----YNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVA 712
H N + Y S V L L +I+ +++ L + +
Sbjct: 112 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIH---SSQPLTLEHVRYFLYQLL 168
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV----GPHSSNWTEFAGT 768
L Y+H +IHRD+ N+L++ N E + DFG+A+ + H TE+ T
Sbjct: 169 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 769 FGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVI 799
Y APE+ ++ T+ D++S G + E++
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEML 257
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK +L G + E+ ++++ H N V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK----VLQGKAFKN----RELQIMRKLDHCNIVRLR 79
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 194
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLL---SGNMADHDEFLNEVLALKE 655
D +D +G G V K S + KF + S ++ EV LKE
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
I+H N + H N L+ E + G L L + + E +K + N +
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGV 126
Query: 716 SYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPHSSNW-TEFAGTFG 770
YLH I H D+ +N+ LLD N + DFG+A H ++ EF FG
Sbjct: 127 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFG 178
Query: 771 ---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ APEI + D++S GV+ + ++ G P
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVIKGVANA 714
VK + + ++V EY+ G + R +G + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL------T 153
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y AP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLAP 207
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EI + + D ++ GVL++E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 607 IGKGGQGSVYKAELPSGD------IVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHR 659
+G+G G V +A+ D VAVK ++H ++E+ L I H
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 128
Query: 660 NNVKFHGFCYN-GPHSFLVCEYLDRGSLA-------------RILGDDVTAKELGWNRRI 705
N V G C G ++ E+ G+L+ ++ +D+ L I
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWT 763
VA + +L IHRD++++N+LL + DFG+A+ + P
Sbjct: 189 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 764 EFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ + APE + T + DV+SFGVL++E+
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 281
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 21/211 (9%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDE---FLNEVLALKEI-RHRNNV 662
+G+G G V +A+ D A + + + A H E ++E+ L I H N V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 663 KFHGFCYN-GPHSFLVCEYLDRGSLARILG-----------DDVTAKELGWNRRINVIKG 710
G C G ++ E+ G+L+ L +D+ L I
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWTEFAGT 768
VA + +L IHRD++++N+LL + DFG+A+ + P +
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ APE + T + DV+SFGVL++E+
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK +L G + E+ ++++ H N V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK----VLQGKAFKN----RELQIMRKLDHCNIVRLR 79
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 194
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 93/229 (40%), Gaps = 24/229 (10%)
Query: 587 GKIMHEEIIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLL---SGNMADH 643
G + +E + D +D +G G V K S + KF + S
Sbjct: 1 GTVFRQENV--DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSR 58
Query: 644 DEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNR 703
++ EV LKEI+H N + H N L+ E + G L L + + E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EE 115
Query: 704 RINVIKGVANALSYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPHS 759
+K + N + YLH I H D+ +N+ LLD N + DFG+A H
Sbjct: 116 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HK 167
Query: 760 SNW-TEFAGTFG---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
++ EF FG + APEI + D++S GV+ + ++ G P
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDE---FLNEVLALKEI-RHRNNV 662
+G+G G V +A+ D A + + + A H E ++E+ L I H N V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 663 KFHGFCYN-GPHSFLVCEYLDRGSLARILG---------DDVTAKELGWNRRINVIKGVA 712
G C G ++ E+ G+L+ L D+ L I VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWTEFAGTFG 770
+ +L IHRD++++N+LL + DFG+A+ + P +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ APE + T + DV+SFGVL++E+
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIF 240
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 86
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------------RRIGRFSEPHARFYA 134
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W GT
Sbjct: 135 AQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV--KGRTWX-LCGT 188
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 189 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 97/249 (38%), Gaps = 43/249 (17%)
Query: 583 LNFDGKIMHEEIIKATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMA 641
L F G I+ +K D+++ K IG+G G VY A + + VA+KK N ++
Sbjct: 14 LYFQGAIIKN--VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMF--EDLI 69
Query: 642 DHDEFLNEVLALKEIRHRNNVKFHGFCY-----NGPHSFLVCEYLDRGSLARILGDDVTA 696
D L E+ L ++ ++ H ++V E D L ++ +
Sbjct: 70 DCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIAD-SDLKKLFKTPIFL 128
Query: 697 KELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV- 755
E ++ + ++H IIHRD+ N LL+ + + DFG+A+ +
Sbjct: 129 TEQHVK---TILYNLLLGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTIN 182
Query: 756 --------------------GPHSSN----WTEFAGTFGYAAPE-IAYTMRATEKYDVYS 790
GPH+ N T T Y APE I T D++S
Sbjct: 183 SDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWS 242
Query: 791 FGVLVFEVI 799
G + E++
Sbjct: 243 TGCIFAELL 251
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVIKGVANA 714
VK + + ++V EY+ G + R +G + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL------T 153
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y AP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLAP 207
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EI + + D ++ GVL++E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 100
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------------RRIGRFSEPHARFYA 148
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W GT
Sbjct: 149 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGT 202
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDE---FLNEVLALKEI-RHRNNV 662
+G+G G V +A+ D A + + + A H E ++E+ L I H N V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 663 KFHGFCYN-GPHSFLVCEYLDRGSLARILG---------DDVTAKELGWNRRINVIKGVA 712
G C G ++ E+ G+L+ L D+ L I VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 713 NALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWTEFAGTFG 770
+ +L IHRD++++N+LL + DFG+A+ + P +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 771 YAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ APE + T + DV+SFGVL++E+
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIF 240
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 643 HDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWN 702
++ EV LKEI+H N + H N L+ E + G L L + + E
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---E 114
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPH 758
+K + N + YLH I H D+ +N+ LLD N + DFG+A H
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----H 166
Query: 759 SSNW-TEFAGTFG---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
++ EF FG + APEI + D++S GV+ + ++ G P
Sbjct: 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 31/217 (14%)
Query: 607 IGKGGQGSVYKAE------LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHR 659
+G+G G V +A+ + VAVK ++H ++E+ L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 91
Query: 660 NNVKFHGFCYN--GPHSFLVCEYLDRGSLA-------------RILGDDVTAKELGWNRR 704
N V G C GP +V E+ G+L+ ++ +D+ L
Sbjct: 92 NVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNW 762
I VA + +L IHRD++++N+LL + DFG+A+ + P
Sbjct: 151 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ + APE + T + DV+SFGVL++E+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------------RRIGRFSEPHARFYA 147
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W GT
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGT 201
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 31/217 (14%)
Query: 607 IGKGGQGSVYKAE------LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHR 659
+G+G G V +A+ + VAVK ++H ++E+ L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 91
Query: 660 NNVKFHGFCYN--GPHSFLVCEYLDRGSLA-------------RILGDDVTAKELGWNRR 704
N V G C GP +V E+ G+L+ ++ +D+ L
Sbjct: 92 NVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNW 762
I VA + +L IHRD++++N+LL + DFG+A+ + P
Sbjct: 151 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ + APE + T + DV+SFGVL++E+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 30/212 (14%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEV-LALKEIRHRNNVKF 664
+G G G V+K +G ++AVK+ SGN ++ L ++ + LK V+
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRR---SGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 665 HGFCYNGPHSFLVCEYLDRGS--LARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC 722
G F+ E + + L + + + + LG + + AL YL
Sbjct: 90 FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG-----KMTVAIVKALYYLKEK- 143
Query: 723 LPSIIHRDISSKNVLLDSNFEAHVSDFGIA-KFVGPHSSNWTEFAGTFGYAAPEIA---- 777
+IHRD+ N+LLD + + DFGI+ + V + + + AG Y APE
Sbjct: 144 -HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS--AGCAAYMAPERIDPPD 200
Query: 778 -----YTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y +RA DV+S G+ + E+ G P
Sbjct: 201 PTKPDYDIRA----DVWSLGISLVELATGQFP 228
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 15/214 (7%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH 658
+DF+ IG+G G V +L + D V K ++ A+ F E L
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 659 RNNVKFHGFCYNGPHSFLVCEYLDRGSLARILG--DDVTAKELGWNRRINVIKGVANALS 716
+ H + + +LV +Y G L +L +D +E+ ++ + +++
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI-DSVH 192
Query: 717 YLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG-IAKFVGPHSSNWTEFAGTFGYAAPE 775
LH+ +HRDI N+L+D N ++DFG K + + + GT Y +PE
Sbjct: 193 QLHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPE 246
Query: 776 IAYTM-----RATEKYDVYSFGVLVFEVIKGNHP 804
I M R + D +S GV ++E++ G P
Sbjct: 247 ILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 80
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 140 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 195
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 196 FGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------------RRIGRFSEPHARFYA 147
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W GT
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGT 201
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLL---SGNMADHDEFLNEVLALKE 655
D +D +G G V K S + KF + S ++ EV LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
I+H N + H N L+ E + G L L + + E +K + N +
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTE---EEATEFLKQILNGV 127
Query: 716 SYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPHSSNW-TEFAGTFG 770
YLH I H D+ +N+ LLD N + DFG+A H ++ EF FG
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFG 179
Query: 771 ---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ APEI + D++S GV+ + ++ G P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D F+ IG G G V + + +G+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVIKGVANA 714
VK + + ++V EY+ G + R +G + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL------T 153
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y AP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV--KGRTWX-LCGTPEYLAP 207
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EI + + D ++ GVL++E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------------RRIGRFSEPHARFYA 147
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W GT
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGT 201
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLL---SGNMADHDEFLNEVLALKE 655
D +D +G G V K S + KF + S ++ EV LKE
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 656 IRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANAL 715
I+H N + H N L+ E + G L L + + E +K + N +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE---EEATEFLKQILNGV 127
Query: 716 SYLHHDCLPSIIHRDISSKNV-LLDSNF---EAHVSDFGIAKFVGPHSSNW-TEFAGTFG 770
YLH I H D+ +N+ LLD N + DFG+A H ++ EF FG
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFG 179
Query: 771 ---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
+ APEI + D++S GV+ + ++ G P
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 89/216 (41%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D F+ IG G G V + + +G+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL------------RRIGRFSEPHARFYA 147
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W GT
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV--KGRTWX-LCGT 201
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------------RRIGRFSEPHARFYA 147
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W GT
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGT 201
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------------RRIGRFSEPHARFYA 147
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W GT
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGT 201
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 194
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 194
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 83
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 143 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 198
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 199 FGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------------RRIGRFSEPHARFYA 147
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W GT
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LXGT 201
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 30/216 (13%)
Query: 607 IGKGGQGSVYKAE------LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHR 659
+G+G G V +A+ + VAVK ++H ++E+ L I H
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 92
Query: 660 NNVKFHGFCYN--GPHSFLVCEYLDRGSLARILG------------DDVTAKELGWNRRI 705
N V G C GP +V E+ G+L+ L +D+ L I
Sbjct: 93 NVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWT 763
VA + +L IHRD++++N+LL + DFG+A+ + P
Sbjct: 152 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 764 EFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ + APE + T + DV+SFGVL++E+
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 607 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDEFLN-----EVLALKEIRHRN 660
+G+G +VYKA + + IVA+KK G+ ++ + +N E+ L+E+ H N
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKL----GHRSEAKDGINRTALREIKLLQELSHPN 73
Query: 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHH 720
+ + + LV ++++ L I+ D+ + ++ L YLH
Sbjct: 74 IIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYLHQ 130
Query: 721 DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTM 780
I+HRD+ N+LLD N ++DFG+AK G + + T Y APE+ +
Sbjct: 131 HW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGA 187
Query: 781 RAT-EKYDVYSFGVLVFEVI 799
R D+++ G ++ E++
Sbjct: 188 RMYGVGVDMWAVGCILAELL 207
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
+G G GSV Y A L VAVKK + S + E+ LK ++H N +
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQS--LIHARRTYRELRLLKHLKHENVI- 90
Query: 664 FHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLH 719
G + + ++ + + ++G D V ++ L ++ + L Y+H
Sbjct: 91 --GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH 148
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT 779
IIHRD+ NV ++ + E + DFG+A+ T + T Y APEI
Sbjct: 149 S---AGIIHRDLKPSNVAVNEDSELRILDFGLARQA---DEEMTGYVATRWYRAPEIMLN 202
Query: 780 -MRATEKYDVYSFGVLVFEVIKGN 802
M + D++S G ++ E+++G
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D F+ +G G G V + + +G+ A+K + Q + + + LNE L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 100
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVIKGVANA 714
VK + + ++V EY+ G + R +G + +I +
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL------T 154
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y AP
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLAP 208
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EI + + D ++ GVL++E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 194
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D F+ IG G G V + + +G+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVIKGVANA 714
VK + + ++V EY+ G + R +G + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL------T 153
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y AP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV--KGRTWX-LCGTPEYLAP 207
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EI + + D ++ GVL++E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 607 IGKGGQGSVYKAE------LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHR 659
+G+G G V +A+ + VAVK ++H ++E+ L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 82
Query: 660 NNVKFHGFCYN-GPHSFLVCEYLDRGSLA-------------RILGDDVTAKELGWNRRI 705
N V G C G ++ E+ G+L+ ++ +D+ L I
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWT 763
VA + +L IHRD++++N+LL + DFG+A+ + P
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 764 EFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ + APE + T + DV+SFGVL++E+
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D F+ +G G G V + + +G+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVIKGVANA 714
VK + + ++V EY+ G + R +G + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL------T 153
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y AP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLAP 207
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EI + + D ++ GVL++E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D F+ +G G G V + + +G+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVIKGVANA 714
VK + + ++V EY+ G + R +G + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL------T 153
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y AP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLAP 207
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EI + + D ++ GVL++E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 43/222 (19%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G+ G VYK L VA+K + G + +EF +E + ++H N
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPL--REEFRHEAMLRARLQHPN 90
Query: 661 NVKFHG-------------FCYNGP-HSFLVCE--YLDRGSLARILGDDVTAKE-LGWNR 703
V G +C +G H FLV + D GS DD T K L
Sbjct: 91 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST----DDDRTVKSALEPPD 146
Query: 704 RINVIKGVANALSYL--HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN 761
++++ +A + YL HH ++H+D++++NVL+ +SD G+ + V ++++
Sbjct: 147 FVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREV--YAAD 199
Query: 762 WTEFAGT----FGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ + G + APE + + D++S+GV+++EV
Sbjct: 200 YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
+G G GSV Y A L VAVKK + S + E+ LK ++H N +
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQS--LIHARRTYRELRLLKHLKHENVI- 82
Query: 664 FHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLH 719
G + + ++ + + ++G D V + L ++ + L Y+H
Sbjct: 83 --GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 140
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT 779
IIHRD+ NV ++ + E + DFG+A+ T + T Y APEI
Sbjct: 141 S---AGIIHRDLKPSNVAVNEDCELRILDFGLARQA---DEEMTGYVATRWYRAPEIMLN 194
Query: 780 -MRATEKYDVYSFGVLVFEVIKGN 802
M + D++S G ++ E+++G
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 98
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 158 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 213
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 87
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 147 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 202
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
+G G GSV Y A L VAVKK + S + E+ LK ++H N +
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQS--LIHARRTYRELRLLKHLKHENVI- 90
Query: 664 FHGFCYNGPHSFLVCEYLDRGSLARILGDD----VTAKELGWNRRINVIKGVANALSYLH 719
G + + ++ + + ++G D V + L ++ + L Y+H
Sbjct: 91 --GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 720 HDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT 779
IIHRD+ NV ++ + E + DFG+A+ T + T Y APEI
Sbjct: 149 S---AGIIHRDLKPSNVAVNEDSELRILDFGLARQA---DEEMTGYVATRWYRAPEIMLN 202
Query: 780 -MRATEKYDVYSFGVLVFEVIKGN 802
M + D++S G ++ E+++G
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 25/226 (11%)
Query: 585 FDGKIMHEEIIKATDDFDEKFCIGKGGQG-SVYKAELPSGDIVAVKKFNS-QLLSGNMAD 642
D IMH+ +D ++ IG G G + + S ++VAVK + ++ N+
Sbjct: 10 MDLPIMHD-----SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVK- 63
Query: 643 HDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL-ARILGDDVTAKELGW 701
E++ + +RH N V+F H +V EY G L RI A
Sbjct: 64 -----REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSE 114
Query: 702 NRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAH--VSDFGIAKFVGPHS 759
+ + + + +SY H + HRD+ +N LLD + + DFG +K HS
Sbjct: 115 DEARFFFQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 171
Query: 760 SNWTEFAGTFGYAAPEIAYTMRATEKY-DVYSFGVLVFEVIKGNHP 804
+ GT Y APE+ K DV+S GV ++ ++ G +P
Sbjct: 172 QPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 607 IGKGGQGSVYKAE------LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHR 659
+G+G G V +A+ + VAVK ++H ++E+ L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 82
Query: 660 NNVKFHGFCYN-GPHSFLVCEYLDRGSLA-------------RILGDDVTAKELGWNRRI 705
N V G C G ++ E+ G+L+ ++ +D+ L I
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWT 763
VA + +L IHRD++++N+LL + DFG+A+ + P
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 764 EFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ + APE + T + DV+SFGVL++E+
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 194
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 12/157 (7%)
Query: 653 LKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKGV 711
L+ +H N + +G H +LV E + G L D + ++ R + V+ +
Sbjct: 75 LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELL----DKILRQKFFSEREASFVLHTI 130
Query: 712 ANALSYLHHDCLPSIIHRDISSKNVLL---DSNFEA-HVSDFGIAKFVGPHSSNWTEFAG 767
+ YLH ++HRD+ N+L N E + DFG AK + +
Sbjct: 131 GKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
T + APE+ E D++S G+L++ ++ G P
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 607 IGKGGQGSVYKAE------LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHR 659
+G+G G V +A+ + VAVK ++H ++E+ L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 82
Query: 660 NNVKFHGFCYN-GPHSFLVCEYLDRGSLA-------------RILGDDVTAKELGWNRRI 705
N V G C G ++ E+ G+L+ ++ +D+ L I
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWT 763
VA + +L IHRD++++N+LL + DFG+A+ + P
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 764 EFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ + APE + T + DV+SFGVL++E+
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D F+ +G G G V + + +G+ A+K + Q + + + LNE L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 100
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------------RRIGRFSEPHARFYA 148
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W GT
Sbjct: 149 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGT 202
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 607 IGKGGQGSVYKAE------LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR- 659
+G+G G V +A+ + VAVK ++H ++E+ L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 82
Query: 660 NNVKFHGFCYN-GPHSFLVCEYLDRGSLA-------------RILGDDVTAKELGWNRRI 705
N V G C G ++ E+ G+L+ ++ +D+ L I
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 706 NVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV--GPHSSNWT 763
VA + +L IHRD++++N+LL + DFG+A+ + P
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 764 EFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ + APE + T + DV+SFGVL++E+
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 235
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 151 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 206
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D F+ +G G G V + + +G+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVIKGVANA 714
VK + + ++V EY+ G + R +G + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL------T 153
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y AP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLAP 207
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EI + + D ++ GVL++E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 151 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 206
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 92
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 152 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 207
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 208 FGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D F+ +G G G V + + +G+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSL---ARILGDDVTAKELGWNRRINVIKGVANA 714
VK + + ++V EY+ G + R +G + +I +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL------T 153
Query: 715 LSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAP 774
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y AP
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLAP 207
Query: 775 EIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
EI + + D ++ GVL++E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 675 FLVCEYLDRGSL-ARI--LGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
+V E LD G L +RI GD T +E ++K + A+ YLH +I HRD
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHSI---NIAHRD 186
Query: 731 ISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYD 787
+ +N+L S N ++DFG AK H+S T + Y APE+ + + D
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 245
Query: 788 VYSFGVLVFEVIKGNHP 804
++S GV+++ ++ G P
Sbjct: 246 MWSLGVIMYILLCGYPP 262
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 31/217 (14%)
Query: 607 IGKGGQGSVYKAELPSGD------IVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHR 659
+G+G G V +A+ D VAVK ++H ++E+ L I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 93
Query: 660 NNVKFHGFCYN--GPHSFLVCEYLDRGSLARILG-------------DDVTAKELGWNRR 704
N V G C GP +V E+ G+L+ L +D+ L
Sbjct: 94 NVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNW 762
I VA + +L IHRD++++N+LL + DFG+A+ + P
Sbjct: 153 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 209
Query: 763 TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ + APE + T + DV+SFGVL++E+
Sbjct: 210 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 246
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 34/219 (15%)
Query: 597 ATDDFDEKFCIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGNMADHDE------FLNE 649
+ D + +G+G G VYKA + + + VA+K+ +H+E + E
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR--------LEHEEEGVPGTAIRE 83
Query: 650 VLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGD--DVTAKELGWNRRINV 707
V LKE++HRN ++ ++ L+ EY + L + + DV+ + + +
Sbjct: 84 VSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIK-----SF 137
Query: 708 IKGVANALSYLH-HDCLPSIIHRDISSKNVLLDSNFEAH-----VSDFGIAKFVGPHSSN 761
+ + N +++ H CL HRD+ +N+LL + + + DFG+A+ G
Sbjct: 138 LYQLINGVNFCHSRRCL----HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ 193
Query: 762 WTEFAGTFGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVI 799
+T T Y PEI R + D++S + E++
Sbjct: 194 FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D F+ +G G G V + + +G+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------------RRIGRFSEPHARFYA 147
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W GT
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGT 201
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 675 FLVCEYLDRGSL-ARI--LGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
+V E LD G L +RI GD T +E ++K + A+ YLH +I HRD
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHSI---NIAHRD 192
Query: 731 ISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYD 787
+ +N+L S N ++DFG AK H+S T + Y APE+ + + D
Sbjct: 193 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 251
Query: 788 VYSFGVLVFEVIKGNHP 804
++S GV+++ ++ G P
Sbjct: 252 MWSLGVIMYILLCGYPP 268
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 29/193 (15%)
Query: 626 VAVKKFNSQLLS--GNMADHDEFLNEVLALKEIRHRNNVKFHGF-----CYNGPHSFLVC 678
VA+K +S G + + EV+ LK++ + F G + P SF++
Sbjct: 79 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV----SSGFSGVIRLLDWFERPDSFVLI 134
Query: 679 EYLDRGSLARILGDDVTAK-----ELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISS 733
L+R + L D +T + EL + V++ V + H+C ++HRDI
Sbjct: 135 --LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC-----HNC--GVLHRDIKD 185
Query: 734 KNVLLDSNF-EAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE-IAYTMRATEKYDVYSF 791
+N+L+D N E + DFG + + +T+F GT Y+ PE I Y V+S
Sbjct: 186 ENILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243
Query: 792 GVLVFEVIKGNHP 804
G+L+++++ G+ P
Sbjct: 244 GILLYDMVCGDIP 256
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y A
Sbjct: 174 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLA 227
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 607 IGKGGQGSVYKAE--LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR---HRNN 661
IG+G G V+KA G VA+K+ Q +G + EV L+ + H N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 662 VKFHGFCY-----NGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALS 716
V+ C LV E++D+ + D V + +++ + L
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL--DKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 717 YLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEI 776
+LH ++HRD+ +N+L+ S+ + ++DFG+A+ + T T Y APE+
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAPEV 190
Query: 777 AYTMRATEKYDVYSFGVLVFEVIK 800
D++S G + E+ +
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFR 214
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLA 207
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 675 FLVCEYLDRGSL-ARI--LGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
+V E LD G L +RI GD T +E ++K + A+ YLH +I HRD
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHSI---NIAHRD 147
Query: 731 ISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYD 787
+ +N+L S N ++DFG AK H+S T + Y APE+ + + D
Sbjct: 148 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 206
Query: 788 VYSFGVLVFEVIKGNHP 804
++S GV+++ ++ G P
Sbjct: 207 MWSLGVIMYILLCGYPP 223
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y A
Sbjct: 146 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLA 199
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLA 207
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLA 206
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 173 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELI 228
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLA 207
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 675 FLVCEYLDRGSL-ARI--LGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
+V E LD G L +RI GD T +E ++K + A+ YLH +I HRD
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHSI---NIAHRD 156
Query: 731 ISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYD 787
+ +N+L S N ++DFG AK H+S T + Y APE+ + + D
Sbjct: 157 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 215
Query: 788 VYSFGVLVFEVIKGNHP 804
++S GV+++ ++ G P
Sbjct: 216 MWSLGVIMYILLCGYPP 232
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D F+ +G G G V + + +G+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------------RRIGRFSEPHARFYA 147
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W GT
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGT 201
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y A
Sbjct: 146 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLA 199
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 17/87 (19%)
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIA---KFVGPHSSNWTEFAGTFGYAAPE-----IA 777
+++RD+ N+LLD + +SD G+A PH+S GT GY APE +A
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 367
Query: 778 YTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y A D +S G ++F++++G+ P
Sbjct: 368 YDSSA----DWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 17/87 (19%)
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIA---KFVGPHSSNWTEFAGTFGYAAPE-----IA 777
+++RD+ N+LLD + +SD G+A PH+S GT GY APE +A
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 367
Query: 778 YTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y A D +S G ++F++++G+ P
Sbjct: 368 YDSSA----DWFSLGCMLFKLLRGHSP 390
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 675 FLVCEYLDRGSL-ARI--LGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
+V E LD G L +RI GD T +E ++K + A+ YLH +I HRD
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHSI---NIAHRD 146
Query: 731 ISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYD 787
+ +N+L S N ++DFG AK H+S T + Y APE+ + + D
Sbjct: 147 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 205
Query: 788 VYSFGVLVFEVIKGNHP 804
++S GV+++ ++ G P
Sbjct: 206 MWSLGVIMYILLCGYPP 222
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLA 206
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLA 206
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------------RRIGRFSEPHARFYA 147
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+++D V+DFG AK V W GT
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV--KGRTWX-LCGT 201
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++E+ G P
Sbjct: 202 PEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 12/157 (7%)
Query: 653 LKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VIKGV 711
L+ +H N + +G H +LV E + G L D + ++ R + V+ +
Sbjct: 75 LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELL----DKILRQKFFSEREASFVLHTI 130
Query: 712 ANALSYLHHDCLPSIIHRDISSKNVLL---DSNFEA-HVSDFGIAKFVGPHSSNWTEFAG 767
+ YLH ++HRD+ N+L N E + DFG AK + +
Sbjct: 131 GKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 768 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
T + APE+ E D++S G+L++ ++ G P
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+++D V+DFG+AK V W GT Y A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV--KGRTWX-LCGTPEYLA 206
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 95/224 (42%), Gaps = 23/224 (10%)
Query: 586 DGKIMHEEIIKATDDFDEKFCIGKGGQG-SVYKAELPSGDIVAVKKFNSQLLSGNMADHD 644
D IMH+ +D ++ IG G G + + S ++VAVK G D +
Sbjct: 10 DLPIMHD-----SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER----GEKIDEN 60
Query: 645 EFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL-ARILGDDVTAKELGWNR 703
E++ + +RH N V+F H +V EY G L RI A +
Sbjct: 61 -VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDE 115
Query: 704 RINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAH--VSDFGIAKFVGPHSSN 761
+ + + +SY H + HRD+ +N LLD + + DFG +K HS
Sbjct: 116 ARFFFQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 172
Query: 762 WTEFAGTFGYAAPEIAYTMRATEKY-DVYSFGVLVFEVIKGNHP 804
+ GT Y APE+ K DV+S GV ++ ++ G +P
Sbjct: 173 KST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 17/87 (19%)
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIA---KFVGPHSSNWTEFAGTFGYAAPE-----IA 777
+++RD+ N+LLD + +SD G+A PH+S GT GY APE +A
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 367
Query: 778 YTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y A D +S G ++F++++G+ P
Sbjct: 368 YDSSA----DWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 17/87 (19%)
Query: 726 IIHRDISSKNVLLDSNFEAHVSDFGIA---KFVGPHSSNWTEFAGTFGYAAPE-----IA 777
+++RD+ N+LLD + +SD G+A PH+S GT GY APE +A
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 366
Query: 778 YTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y A D +S G ++F++++G+ P
Sbjct: 367 YDSSA----DWFSLGCMLFKLLRGHSP 389
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 675 FLVCEYLDRGSL-ARI--LGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
+V E LD G L +RI GD T +E ++K + A+ YLH +I HRD
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHSI---NIAHRD 140
Query: 731 ISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYD 787
+ +N+L S N ++DFG AK H+S T + Y APE+ + + D
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 199
Query: 788 VYSFGVLVFEVIKGNHP 804
++S GV+++ ++ G P
Sbjct: 200 MWSLGVIMYILLCGYPP 216
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 675 FLVCEYLDRGSL-ARI--LGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
+V E LD G L +RI GD T +E ++K + A+ YLH +I HRD
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHSI---NIAHRD 148
Query: 731 ISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYD 787
+ +N+L S N ++DFG AK H+S T + Y APE+ + + D
Sbjct: 149 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 207
Query: 788 VYSFGVLVFEVIKGNHP 804
++S GV+++ ++ G P
Sbjct: 208 MWSLGVIMYILLCGYPP 224
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------------RRIGRFSEPHARFYA 147
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W GT
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGT 201
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y APEI + + D ++ GVL++++ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 675 FLVCEYLDRGSL-ARI--LGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
+V E LD G L +RI GD T +E ++K + A+ YLH +I HRD
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHSI---NIAHRD 141
Query: 731 ISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYD 787
+ +N+L S N ++DFG AK H+S T + Y APE+ + + D
Sbjct: 142 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 200
Query: 788 VYSFGVLVFEVIKGNHP 804
++S GV+++ ++ G P
Sbjct: 201 MWSLGVIMYILLCGYPP 217
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 84
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 144 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 199
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 200 FGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 31/223 (13%)
Query: 607 IGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-HRNNVKF 664
+ +GG VY+A+ + SG A+K+ LLS + + EV +K++ H N V+F
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKR----LLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF 91
Query: 665 HGFCY-------NGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
G FL+ L +G L L + L + + + A+ +
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQH 151
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFA----------- 766
+H P IIHRD+ +N+LL + + DFG A + H +++ A
Sbjct: 152 MHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS-HYPDYSWSAQRRALVEEEIT 209
Query: 767 --GTFGYAAPEIA--YT-MRATEKYDVYSFGVLVFEVIKGNHP 804
T Y PEI Y+ EK D+++ G +++ + HP
Sbjct: 210 RNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 43/222 (19%)
Query: 607 IGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN 660
+G+ G VYK L VA+K + G + +EF +E + ++H N
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPL--REEFRHEAMLRARLQHPN 73
Query: 661 NVKFHG-------------FCYNGP-HSFLVCE--YLDRGSLARILGDDVTAKE-LGWNR 703
V G +C +G H FLV + D GS DD T K L
Sbjct: 74 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST----DDDRTVKSALEPPD 129
Query: 704 RINVIKGVANALSYL--HHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN 761
++++ +A + YL HH ++H+D++++NVL+ +SD G+ + V ++++
Sbjct: 130 FVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREV--YAAD 182
Query: 762 WTEFAGT----FGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ + G + APE + + D++S+GV+++EV
Sbjct: 183 YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 675 FLVCEYLDRGSL-ARI--LGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
+V E LD G L +RI GD T +E ++K + A+ YLH +I HRD
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHSI---NIAHRD 142
Query: 731 ISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYD 787
+ +N+L S N ++DFG AK H+S T + Y APE+ + + D
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 201
Query: 788 VYSFGVLVFEVIKGNHP 804
++S GV+++ ++ G P
Sbjct: 202 MWSLGVIMYILLCGYPP 218
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 675 FLVCEYLDRGSL-ARI--LGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRD 730
+V E LD G L +RI GD T +E ++K + A+ YLH +I HRD
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHSI---NIAHRD 142
Query: 731 ISSKNVLLDS---NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYD 787
+ +N+L S N ++DFG AK H+S T + Y APE+ + + D
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCD 201
Query: 788 VYSFGVLVFEVIKGNHP 804
++S GV+++ ++ G P
Sbjct: 202 MWSLGVIMYILLCGYPP 218
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 158
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 218 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 273
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 274 FGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 107
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 167 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 222
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 223 FGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 51/144 (35%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 102 LSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161
L+KL +L+L NQL L L +L L L NQL L+ +DKL L N
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 162 NLHGSIPSSL-GNLSNLAVLYLYKNSLSGSIPS-IIGKLKSLLQLDLSENQFSGSIPLSL 219
L S+PS + L+ L L L N L SIP+ KL +L L LS NQ +
Sbjct: 118 QLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAF 175
Query: 220 GNLSSLTMMSLFNNSLSGSIPPIL 243
L L ++LF N S IL
Sbjct: 176 DRLGKLQTITLFGNQFDCSRCEIL 199
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 429 FGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDL 488
F LTKL +L+L N+L + +L +L L L+NNQL+ F+ L L +L L
Sbjct: 55 FRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114
Query: 489 SHNILQEEIPPQVCN-MGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELH 542
N L+ +P V + + L++L L+ N L F+++ +L + +S N+L
Sbjct: 115 GGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Query: 106 QYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHG 165
+ LDL S L+ L L +L L LD NQL L+ + L L +N L
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-A 96
Query: 166 SIP-SSLGNLSNLAVLYLYKNSLSGSIPS-IIGKLKSLLQLDLSENQFSGSIPL-SLGNL 222
S+P +L+ L LYL N L S+PS + +L L +L L+ NQ SIP + L
Sbjct: 97 SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKL 154
Query: 223 SSLTMMSLFNNSLSGSIP----PILGNLKSLSALG 253
++L +SL N L S+P LG L++++ G
Sbjct: 155 TNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFG 188
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 101 NLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCH 160
+L++L L L +NQL+ L L QL +LYL NQL +L+ + +L L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNT 140
Query: 161 NNLHGSIPS-SLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGS 214
N L SIP+ + L+NL L L N L +L L + L NQF S
Sbjct: 141 NQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 52/113 (46%)
Query: 429 FGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDL 488
F LT+L L L+ N+L+S +L +L L L NQL F++L L EL L
Sbjct: 79 FDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138
Query: 489 SHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNEL 541
+ N LQ + +L+ L+LS N L F+ + L I + N+
Sbjct: 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 65/166 (39%), Gaps = 8/166 (4%)
Query: 190 SIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSL 249
S+PS G +LDL + + L+ LT ++L N L + +L L
Sbjct: 28 SVPS--GIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTEL 85
Query: 250 SALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRG 309
LGL NQL +L+ L LYL N L L L EL L TN L+
Sbjct: 86 GTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS 145
Query: 310 VIPHSIERVL------LNQNNLSGKMYEAFGDHPNLTFLDLSNNNF 349
+ + +++ L+ N L + AF L + L N F
Sbjct: 146 IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 38.9 bits (89), Expect = 0.013, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 436 QYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQE 495
+ LDL + L++ + L KL +LNL NQL F+ L L L L++N L
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA- 96
Query: 496 EIPPQVCN-MGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELH 542
+P V + + L+KL L N L F+ + L + ++ N+L
Sbjct: 97 SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ 144
Score = 37.4 bits (85), Expect = 0.032, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 59/155 (38%), Gaps = 3/155 (1%)
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
C S+PS G ++ L L L+ + L L L+L NQ
Sbjct: 21 CQGKSLDSVPS--GIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGV 78
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYL 278
+L+ L + L NN L+ + +L L L L NQL L+ L+ L L
Sbjct: 79 FDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138
Query: 279 YNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPH 313
N L L +L L L TN L+ V PH
Sbjct: 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV-PH 172
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 607 IGKGGQGSVYKAE--LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR---HRNN 661
IG+G G V+KA G VA+K+ Q +G + EV L+ + H N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 662 VKFHGFCY-----NGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALS 716
V+ C LV E++D+ + D V + +++ + L
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL--DKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 717 YLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEI 776
+LH ++HRD+ +N+L+ S+ + ++DFG+A+ + T T Y APE+
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALTSVVVTLWYRAPEV 190
Query: 777 AYTMRATEKYDVYSFGVLVFEVIK 800
D++S G + E+ +
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFR 214
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 20/219 (9%)
Query: 596 KATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKF---NSQLLSGNMADHDEFLNEVLA 652
K D +D +G G V K S + KF S +E EV
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68
Query: 653 LKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVA 712
L+++ H N + H N L+ E + G L L + L + IK +
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQIL 125
Query: 713 NALSYLHHDCLPSIIHRDISSKNV-LLDSNFEA-HVS--DFGIAKFVGPHSSNWTEFAGT 768
+ ++YLH I H D+ +N+ LLD N H+ DFG+A + + EF
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI----EDGVEFKNI 178
Query: 769 FG---YAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
FG + APEI + D++S GV+ + ++ G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+++D V+DFG+AK V W GT Y A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV--KGRTWX-LCGTPEYLA 206
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 173 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 228
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 115
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 175 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 230
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+L+D V+DFG AK V W GT Y A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV--KGRTWX-LCGTPEYLA 207
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 607 IGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
IG G G VY+A+L SG++VA+KK + D E+ ++++ H N V+
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 117
Query: 666 GFCYNGPHSF------LVCEYLDRGSLARILGDDVTAKELGWNRRINV-IKGVANALSYL 718
F Y+ LV +Y+ ++ R+ AK+ + + + + +L+Y+
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 719 HHDCLPSIIHRDISSKNVLLDSNFEA-HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
H I HRDI +N+LLD + + DFG AK + N + + Y APE+
Sbjct: 177 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELI 232
Query: 778 Y-TMRATEKYDVYSFGVLVFEVIKGN 802
+ T DV+S G ++ E++ G
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 24/121 (19%)
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS-------------NFEAHVSDFGI 751
I++++ +A+ +++LH IIHRD+ +N+L+ + N +SDFG+
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 752 AKFVGP----HSSNWTEFAGTFGYAAPEI---AYTMRATEKYDVYSFGVLVFEVI-KGNH 803
K + N +GT G+ APE+ + R T D++S G + + ++ KG H
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 804 P 804
P
Sbjct: 253 P 253
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
++V E +D +L +++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G E + Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-YRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVI 799
M E D++S G ++ E++
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMV 219
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 607 IGKGGQGSVYKAE--LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR---HRNN 661
IG+G G V+KA G VA+K+ Q +G + EV L+ + H N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 662 VKFHGFCY-----NGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALS 716
V+ C LV E++D+ + D V + +++ + L
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL--DKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 717 YLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEI 776
+LH ++HRD+ +N+L+ S+ + ++DFG+A+ + T T Y APE+
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALTSVVVTLWYRAPEV 190
Query: 777 AYTMRATEKYDVYSFGVLVFEVIK 800
D++S G + E+ +
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFR 214
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+++D V+DFG AK V W GT Y A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV--KGRTWX-LCGTPEYLA 206
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 24/121 (19%)
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS-------------NFEAHVSDFGI 751
I++++ +A+ +++LH IIHRD+ +N+L+ + N +SDFG+
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 752 AKFVGP----HSSNWTEFAGTFGYAAPEI---AYTMRATEKYDVYSFGVLVFEVI-KGNH 803
K + N +GT G+ APE+ + R T D++S G + + ++ KG H
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 804 P 804
P
Sbjct: 253 P 253
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWTEFAGT 768
VA + +L IHRD++++N+LL N + DFG+A+ + P +
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ APE + + K DV+S+GVL++E+
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIF 295
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 429 FGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDL 488
F LTKL +L+L N+L + +L +L L L+NNQL+ F+ L L +L L
Sbjct: 55 FRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114
Query: 489 SHNILQEEIPPQVCN-MGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELH 542
N L+ +P V + + L++L L+ N L F+++ +L + +S N+L
Sbjct: 115 GGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/139 (35%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 102 LSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161
L+KL +L+L NQL L L +L L L NQL L+ +DKL L N
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 162 NLHGSIPSSL-GNLSNLAVLYLYKNSLSGSIPS-IIGKLKSLLQLDLSENQFSGSIPLSL 219
L S+PS + L+ L L L N L SIP+ KL +L L LS NQ +
Sbjct: 118 QLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAF 175
Query: 220 GNLSSLTMMSLFNNSLSGS 238
L L ++LF N S
Sbjct: 176 DRLGKLQTITLFGNQFDCS 194
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Query: 106 QYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHG 165
+ LDL S L+ L L +L L LD NQL L+ + L L +N L
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-A 96
Query: 166 SIP-SSLGNLSNLAVLYLYKNSLSGSIPS-IIGKLKSLLQLDLSENQFSGSIPL-SLGNL 222
S+P +L+ L LYL N L S+PS + +L L +L L+ NQ SIP + L
Sbjct: 97 SLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKL 154
Query: 223 SSLTMMSLFNNSLSGSIP----PILGNLKSLSALG 253
++L +SL N L S+P LG L++++ G
Sbjct: 155 TNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFG 188
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 101 NLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCH 160
+L++L L L +NQL+ L L QL +LYL NQL +L+ + +L L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNT 140
Query: 161 NNLHGSIPS-SLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGS 214
N L SIP+ + L+NL L L N L +L L + L NQF S
Sbjct: 141 NQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 52/113 (46%)
Query: 429 FGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDL 488
F LT+L L L+ N+L+S +L +L L L NQL F++L L EL L
Sbjct: 79 FDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138
Query: 489 SHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNEL 541
+ N LQ + +L+ L+LS N L F+ + L I + N+
Sbjct: 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 65/166 (39%), Gaps = 8/166 (4%)
Query: 190 SIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSL 249
S+PS G +LDL + + L+ LT ++L N L + +L L
Sbjct: 28 SVPS--GIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTEL 85
Query: 250 SALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRG 309
LGL NQL +L+ L LYL N L L L EL L TN L+
Sbjct: 86 GTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS 145
Query: 310 VIPHSIERVL------LNQNNLSGKMYEAFGDHPNLTFLDLSNNNF 349
+ + +++ L+ N L + AF L + L N F
Sbjct: 146 IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 38.9 bits (89), Expect = 0.013, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 436 QYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQE 495
+ LDL + L++ + L KL +LNL NQL F+ L L L L++N L
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA- 96
Query: 496 EIPPQVCN-MGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELH 542
+P V + + L+KL L N L F+ + L + ++ N+L
Sbjct: 97 SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ 144
Score = 37.4 bits (85), Expect = 0.032, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 59/155 (38%), Gaps = 3/155 (1%)
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
C S+PS G ++ L L L+ + L L L+L NQ
Sbjct: 21 CQGKSLDSVPS--GIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGV 78
Query: 219 LGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYL 278
+L+ L + L NN L+ + +L L L L NQL L+ L+ L L
Sbjct: 79 FDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138
Query: 279 YNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPH 313
N L L +L L L TN L+ V PH
Sbjct: 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV-PH 172
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 707 VIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFA 766
+ + + +A+ YL L IIHRDI +N+++ +F + DFG A ++ +T F
Sbjct: 135 IFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT-FC 190
Query: 767 GTFGYAAPEIAY--TMRATEKYDVYSFGVLVFEVIKGNHP 804
GT Y APE+ R E +++S GV ++ ++ +P
Sbjct: 191 GTIEYCAPEVLMGNPYRGPE-LEMWSLGVTLYTLVFEENP 229
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+++D V+DFG AK V W GT Y A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV--KGRTWX-LCGTPEYLA 207
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+++D V+DFG AK V W GT Y A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV--KGRTWX-LCGTPEYLA 207
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+++D V+DFG AK V W GT Y A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV--KGRTWX-LCGTPEYLA 207
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 23/225 (10%)
Query: 585 FDGKIMHEEIIKATDDFDEKFCIGKGGQG-SVYKAELPSGDIVAVKKFNSQLLSGNMADH 643
D IMH+ +D ++ IG G G + + + ++VAVK G D
Sbjct: 10 MDLPIMHD-----SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIER----GEKIDE 60
Query: 644 DEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL-ARILGDDVTAKELGWN 702
+ E++ + +RH N V+F H +V EY G L RI A +
Sbjct: 61 N-VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSED 115
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAH--VSDFGIAKFVGPHSS 760
+ + + +SY H + HRD+ +N LLD + ++DFG +K HS
Sbjct: 116 EARFFFQQLISGVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ 172
Query: 761 NWTEFAGTFGYAAPEIAYTMRATEKY-DVYSFGVLVFEVIKGNHP 804
+ GT Y APE+ K DV+S GV ++ ++ G +P
Sbjct: 173 PKSA-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+++D V+DFG AK V W GT Y A
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV--KGRTWX-LCGTPEYLA 207
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+++D V+DFG AK V W GT Y A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV--KGRTWX-LCGTPEYLA 206
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 714 ALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAA 773
YLH +I+RD+ +N+++D V+DFG AK V W GT Y A
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV--KGRTWX-LCGTPEYLA 206
Query: 774 PEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
PEI + + D ++ GVL++E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218
C + H S+P+ G +N +LYL+ N ++ P + L +L +L L NQ G++P+
Sbjct: 26 CRSKRHASVPA--GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVG 82
Query: 219 L-GNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLY 277
+ +L+ LT++ L N L+ + L L L + N+L +P I L+ L L
Sbjct: 83 VFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLA 141
Query: 278 LYNNGLYGFVPEEIGYLKSLSELELCTN 305
L N L L SL+ L N
Sbjct: 142 LDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 106 QYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIP----PEIGQLSLIDKLALCHN 161
Q L L NQ++ L P L L+ LYL NQL G +P + QL+++D L N
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLD---LGTN 98
Query: 162 NLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPL-SLG 220
L + L +L L++ N L+ +P I +L L L L +NQ SIP +
Sbjct: 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHGAFD 156
Query: 221 NLSSLTMMSLFNN 233
LSSLT LF N
Sbjct: 157 RLSSLTHAYLFGN 169
Score = 46.2 bits (108), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 426 PLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSE 485
P F SL L+ L L +N+L + +L +L L+L NQL+ F++L+HL E
Sbjct: 57 PGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKE 116
Query: 486 LDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLS 532
L + N L E+P + + L L L N L F+ + SL+
Sbjct: 117 LFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLT 162
Score = 39.3 bits (90), Expect = 0.009, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 430 GSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLS 489
G T Q L L N+++ P +L+ L L L +NQL F+ L L+ LDL
Sbjct: 37 GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96
Query: 490 HNILQEEIPPQVCN-MGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNEL----HGP 544
N L +P V + + L++L + N L++ +PR E + L+ + + N+L HG
Sbjct: 97 TNQLT-VLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQNQLKSIPHGA 154
Query: 545 IPNSTAFKDGLMEGN 559
++ + GN
Sbjct: 155 FDRLSSLTHAYLFGN 169
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 93/234 (39%), Gaps = 27/234 (11%)
Query: 106 QYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHG 165
+YL+L N + + L L L L N + L ++ L L N L
Sbjct: 38 RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 97
Query: 166 SIPSSLGNLSNLAVLYLYKNSLSGSIPS-IIGKLKSLLQLDL---------SENQFSGSI 215
+ LS L L+L N + SIPS ++ SL +LDL SE F G +
Sbjct: 98 VPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLV 156
Query: 216 PLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRV 275
L NL + + P L L L L L N+L+ P S L+SLR
Sbjct: 157 NLRYLNLGMCNLKDI----------PNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRK 206
Query: 276 LYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGV-----IP-HSIERVLLNQN 323
L+L + + LKSL EL L N L + P H +ERV LN N
Sbjct: 207 LWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 113/281 (40%), Gaps = 47/281 (16%)
Query: 263 IPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQ 322
+P SI + R L L N + + +L+ L L+L NL+R +
Sbjct: 29 VPASIP--VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKI------------ 74
Query: 323 NNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIG 382
AF P+L L+L +N + + SKL + N I SIP
Sbjct: 75 ------EVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAF 127
Query: 383 NS-PKLQVLDLSSNHIVGKIPVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLS 441
N P L+ LDL G++ +LE F L L+YL+L
Sbjct: 128 NRVPSLRRLDL------GELK-RLEYISEAA----------------FEGLVNLRYLNLG 164
Query: 442 TNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQV 501
L IP ++ L++L L LS N+L P F+ L L +L L H +
Sbjct: 165 MCNLKD-IP-NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAF 222
Query: 502 CNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELH 542
++ SLE+LNLSHNNL F + L + +++N H
Sbjct: 223 DDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWH 263
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 97 LQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKL 156
L +G L +L+Y+ + GL+ LR L L M L P + L +++L
Sbjct: 136 LDLGELKRLEYISEAA--FEGLV--------NLRYLNLGMCNLKDI--PNLTALVRLEEL 183
Query: 157 ALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSEN 209
L N L P S L++L L+L ++ + LKSL +L+LS N
Sbjct: 184 ELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHN 236
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 94 NIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLI 153
+IP + L +L+ L+L N+L + P L LR+L+L Q+ L +
Sbjct: 170 DIP-NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSL 228
Query: 154 DKLALCHNNLHGSIPSSL 171
++L L HNNL S+P L
Sbjct: 229 EELNLSHNNLM-SLPHDL 245
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 607 IGKGGQGSVYK-AELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFH 665
+G G G V++ E +G + K N+ D NE+ + ++ H + H
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLH 114
Query: 666 GFCYNGPHSFLVCEYLDRGSL-ARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLP 724
+ L+ E+L G L RI +D E IN ++ L ++H
Sbjct: 115 DAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEA---EVINYMRQACEGLKHMHEH--- 168
Query: 725 SIIHRDISSKNVLLDSNFEAHVS--DFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRA 782
SI+H DI +N++ ++ + V DFG+A + P A T +AAPEI
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA-TAEFAAPEIVDREPV 227
Query: 783 TEKYDVYSFGVLVFEVIKGNHP 804
D+++ GVL + ++ G P
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSP 249
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 87/216 (40%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------------RRIGRFSEPHARFYA 147
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W GT
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGT 201
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
Y AP I + + D ++ GVL++E+ G P
Sbjct: 202 PEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 607 IGKGGQGSV---YKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK 663
IG G QG V Y A L VA+KK + N E++ +K + H+N +
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 664 F------HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSY 717
++V E +D +L +++ EL R ++ + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVI-----QMELDHERMSYLLYQMLCGIKH 141
Query: 718 LHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA 777
LH IIHRD+ N+++ S+ + DFG+A+ G E + Y APE+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-YRAPEVI 197
Query: 778 YTMRATEKYDVYSFGVLVFEVI 799
M E D++S G ++ E++
Sbjct: 198 LGMGYKENVDLWSVGCIMGEMV 219
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 607 IGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHG 666
IG+G G V K + G +++ ++ + D D F E+ +K + H N ++ +
Sbjct: 34 IGRGSWGEV-KIAVQKG--TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSI 726
+ +LV E G L + +E R ++K V +A++Y H ++
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR---IMKDVLSAVAYCHK---LNV 144
Query: 727 IHRDISSKNVLL--DS-NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRAT 783
HRD+ +N L DS + + DFG+A P T+ GT Y +P++ +
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK-VGTPYYVSPQVLEGLYGP 203
Query: 784 EKYDVYSFGVLVFEVIKGNHP 804
E D +S GV+++ ++ G P
Sbjct: 204 E-CDEWSAGVMMYVLLCGYPP 223
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 28/125 (22%)
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS-------------NFEAHVSDFGI 751
I++++ +A+ +++LH IIHRD+ +N+L+ + N +SDFG+
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 752 AKFVGPHSS----NWTEFAGTFGYAAPE-------IAYTMRATEKYDVYSFGVLVFEVI- 799
K + S N +GT G+ APE + R T D++S G + + ++
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 800 KGNHP 804
KG HP
Sbjct: 235 KGKHP 239
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWTEFAGT 768
VA + +L IHRD++++N+LL + DFG+A+ + P +
Sbjct: 207 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ APE + T + DV+SFGVL++E+
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 294
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWTEFAGT 768
VA + +L IHRD++++N+LL + DFG+A+ + P +
Sbjct: 209 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ APE + T + DV+SFGVL++E+
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 296
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWTEFAGT 768
VA + +L IHRD++++N+LL + DFG+A+ + P +
Sbjct: 202 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ APE + T + DV+SFGVL++E+
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 289
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 21/227 (9%)
Query: 591 HEEIIKA-------TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADH 643
+E+I+K +D+D IG+G G V + V K S+ +D
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS 119
Query: 644 DEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGD-DVTAKELGWN 702
F E + V+ + + ++V EY+ G L ++ + DV K W
Sbjct: 120 AFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK---WA 176
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNW 762
+ V AL +H +IHRD+ N+LLD + ++DFG +
Sbjct: 177 KFYTA--EVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVH 231
Query: 763 TEFA-GTFGYAAPEIAYTMRATEKY----DVYSFGVLVFEVIKGNHP 804
+ A GT Y +PE+ + Y D +S GV +FE++ G+ P
Sbjct: 232 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 711 VANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK--FVGPHSSNWTEFAGT 768
VA + +L IHRD++++N+LL + DFG+A+ + P +
Sbjct: 200 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
+ APE + T + DV+SFGVL++E+
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 287
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 93/234 (39%), Gaps = 27/234 (11%)
Query: 106 QYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHG 165
+YL+L N + + L L L L N + L ++ L L N L
Sbjct: 38 RYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT 97
Query: 166 SIPSSLGNLSNLAVLYLYKNSLSGSIPS-IIGKLKSLLQLDL---------SENQFSGSI 215
+ LS L L+L N + SIPS ++ SL +LDL SE F G +
Sbjct: 98 VPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLV 156
Query: 216 PLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRV 275
L NL + + P L L L L L N+L+ P S L+SLR
Sbjct: 157 NLRYLNLGMCNLKDI----------PNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRK 206
Query: 276 LYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGV-----IP-HSIERVLLNQN 323
L+L + + LKSL EL L N L + P H +ERV LN N
Sbjct: 207 LWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 113/281 (40%), Gaps = 47/281 (16%)
Query: 263 IPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQ 322
+P SI + R L L N + + +L+ L L+L NL+R +
Sbjct: 29 VPASIP--VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKI------------ 74
Query: 323 NNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIG 382
AF P+L L+L +N + + SKL + N I SIP
Sbjct: 75 ------EVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAF 127
Query: 383 NS-PKLQVLDLSSNHIVGKIPVQLEMXXXXXXXXXXXXXXXGGVPLEFGSLTKLQYLDLS 441
N P L+ LDL G++ +LE F L L+YL+L
Sbjct: 128 NRVPSLRRLDL------GELK-RLEYISEAA----------------FEGLVNLRYLNLG 164
Query: 442 TNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQV 501
L IP ++ L++L L LS N+L P F+ L L +L L H +
Sbjct: 165 MCNLKD-IP-NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAF 222
Query: 502 CNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELH 542
++ SLE+LNLSHNNL F + L + +++N H
Sbjct: 223 DDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWH 263
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Query: 97 LQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKL 156
L +G L +L+Y+ + GL+ LR L L M L P + L +++L
Sbjct: 136 LDLGELKRLEYISEAA--FEGLV--------NLRYLNLGMCNLKDI--PNLTALVRLEEL 183
Query: 157 ALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQF 211
L N L P S L++L L+L ++ + LKSL +L+LS N
Sbjct: 184 ELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 102 LSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161
L +L+ L+L N+L + P L LR+L+L Q+ L +++L L HN
Sbjct: 177 LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHN 236
Query: 162 NLHGSIPSSL 171
NL S+P L
Sbjct: 237 NLM-SLPHDL 245
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 681 LDRGSLARILGDDVTAK-ELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD 739
L+R A+ L D +T K LG V A+ + H ++HRDI +N+L+D
Sbjct: 117 LERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILID 173
Query: 740 -SNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE-IAYTMRATEKYDVYSFGVLVFE 797
A + DFG + H +T+F GT Y+ PE I+ V+S G+L+++
Sbjct: 174 LRRGCAKLIDFGSGALL--HDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYD 231
Query: 798 VIKGNHP 804
++ G+ P
Sbjct: 232 MVCGDIP 238
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 39/216 (18%)
Query: 607 IGKGGQGSVYKAELP--SGDI--VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662
+G+G G VY+ G+ VAVK N ++F++E + +K + H + V
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN---KEKFMSEAVIMKNLDHPHIV 88
Query: 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIK---------GVAN 713
K G P ++++ E G L L R N +K +
Sbjct: 89 KLIGIIEEEP-TWIIMELYPYGELGHYL-----------ERNKNSLKVLTLVLYSLQICK 136
Query: 714 ALSYLHH-DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT---F 769
A++YL +C +HRDI+ +N+L+ S + DFG+++++ ++ + + T
Sbjct: 137 AMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYI--EDEDYYKASVTRLPI 190
Query: 770 GYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHP 804
+ +PE R T DV+ F V ++E++ G P
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 18/220 (8%)
Query: 590 MHEEIIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNE 649
+H I+ TD ++ K IG G + + ++ +F +++ + D E + E
Sbjct: 13 LHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNM----EFAVKIIDKSKRDPTEEI-E 67
Query: 650 VLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRIN-VI 708
+L L+ +H N + +G + ++V E + G L D + ++ R + V+
Sbjct: 68 IL-LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELL----DKILRQKFFSEREASAVL 122
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLL---DSNFEA-HVSDFGIAKFVGPHSSNWTE 764
+ + YLH ++HRD+ N+L N E+ + DFG AK + +
Sbjct: 123 FTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179
Query: 765 FAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
T + APE+ D++S GVL++ ++ G P
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 23/225 (10%)
Query: 585 FDGKIMHEEIIKATDDFDEKFCIGKGGQG-SVYKAELPSGDIVAVKKFNSQLLSGNMADH 643
D IMH+ +D ++ IG G G + + S ++VAVK G D
Sbjct: 10 MDLPIMHD-----SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER----GEKIDE 60
Query: 644 DEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYLDRGSL-ARILGDDVTAKELGWN 702
+ E++ + +RH N V+F H +V EY G L RI A +
Sbjct: 61 N-VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSED 115
Query: 703 RRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAH--VSDFGIAKFVGPHSS 760
+ + + +SY H + HRD+ +N LLD + + FG +K HS
Sbjct: 116 EARFFFQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ 172
Query: 761 NWTEFAGTFGYAAPEIAYTMRATEKY-DVYSFGVLVFEVIKGNHP 804
+ GT Y APE+ K DV+S GV ++ ++ G +P
Sbjct: 173 P-KDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 87/216 (40%), Gaps = 29/216 (13%)
Query: 599 DDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR 657
D FD +G G G V + SG+ A+K + Q + + + LNE L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVN 99
Query: 658 HRNNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVI--------- 708
VK + + ++V EY+ G + L RRI
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL------------RRIGRFSEPHARFYA 147
Query: 709 KGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGT 768
+ YLH +I+RD+ +N+L+D V+DFG AK V W GT
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWX-LCGT 201
Query: 769 FGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804
APEI + + D ++ GVL++E+ G P
Sbjct: 202 PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 77/185 (41%), Gaps = 37/185 (20%)
Query: 648 NEVLALKEI----RHRNNVKFHGFCYNGPHS-----------------FLVCEYLDRGSL 686
E ALK + + R V+ H PH +V E LD G L
Sbjct: 87 QEKFALKXLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGEL 146
Query: 687 -ARI--LGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS-- 740
+RI GD T +E + K + A+ YLH +I HRD+ +N+L S
Sbjct: 147 FSRIQDRGDQAFTEREAS-----EIXKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKR 198
Query: 741 -NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVI 799
N ++DFG AK H+S T + Y APE+ + + D +S GV+ + ++
Sbjct: 199 PNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDXWSLGVIXYILL 257
Query: 800 KGNHP 804
G P
Sbjct: 258 CGYPP 262
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 28/125 (22%)
Query: 705 INVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS-------------NFEAHVSDFGI 751
I++++ +A+ +++LH IIHRD+ +N+L+ + N +SDFG+
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 752 AKFVGP----HSSNWTEFAGTFGYAAPE-------IAYTMRATEKYDVYSFGVLVFEVI- 799
K + N +GT G+ APE + R T D++S G + + ++
Sbjct: 175 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 800 KGNHP 804
KG HP
Sbjct: 235 KGKHP 239
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,232,182
Number of Sequences: 62578
Number of extensions: 1004585
Number of successful extensions: 5716
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 315
Number of HSP's that attempted gapping in prelim test: 2334
Number of HSP's gapped (non-prelim): 1796
length of query: 848
length of database: 14,973,337
effective HSP length: 107
effective length of query: 741
effective length of database: 8,277,491
effective search space: 6133620831
effective search space used: 6133620831
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)