Query 038003
Match_columns 848
No_of_seqs 848 out of 5347
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 10:48:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038003.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038003hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 3.1E-77 1.1E-81 721.6 33.7 548 3-563 11-741 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.8E-62 6.3E-67 592.5 29.5 483 55-544 179-743 (768)
3 4eco_A Uncharacterized protein 100.0 5.5E-61 1.9E-65 566.5 19.0 486 4-543 30-601 (636)
4 4ecn_A Leucine-rich repeat pro 100.0 3.7E-59 1.3E-63 558.9 29.2 486 3-542 268-864 (876)
5 1ziw_A TOLL-like receptor 3; i 100.0 3.8E-57 1.3E-61 541.1 39.9 492 54-546 25-601 (680)
6 3t6q_A CD180 antigen; protein- 100.0 9E-57 3.1E-61 530.6 34.6 499 44-546 14-564 (606)
7 3vq2_A TLR4, TOLL-like recepto 100.0 4.6E-56 1.6E-60 524.6 29.8 498 39-546 4-562 (606)
8 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-54 4.3E-59 519.3 38.2 469 79-547 25-578 (680)
9 3t6q_A CD180 antigen; protein- 100.0 2.4E-54 8.1E-59 510.0 34.5 483 59-547 17-541 (606)
10 3j0a_A TOLL-like receptor 5; m 100.0 1E-53 3.5E-58 521.5 33.6 488 42-546 14-564 (844)
11 3vq2_A TLR4, TOLL-like recepto 100.0 2.1E-53 7.2E-58 501.8 25.3 477 58-547 15-538 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 2E-52 6.9E-57 510.1 34.1 478 77-565 22-563 (844)
13 2z81_A CD282 antigen, TOLL-lik 100.0 6.9E-53 2.4E-57 491.4 24.5 480 41-546 3-514 (549)
14 4eco_A Uncharacterized protein 100.0 5.9E-53 2E-57 497.9 18.1 434 79-548 81-584 (636)
15 2z63_A TOLL-like receptor 4, v 100.0 1.2E-51 4.2E-56 483.2 25.4 485 55-548 29-537 (570)
16 2z63_A TOLL-like receptor 4, v 100.0 4.4E-50 1.5E-54 470.1 27.3 462 55-523 53-536 (570)
17 2z7x_B TOLL-like receptor 1, v 100.0 4.6E-50 1.6E-54 464.1 22.8 458 58-546 4-485 (520)
18 4ecn_A Leucine-rich repeat pro 100.0 1.9E-49 6.5E-54 475.0 24.7 415 79-544 323-842 (876)
19 2z81_A CD282 antigen, TOLL-lik 100.0 6.3E-49 2.1E-53 458.0 25.7 469 42-522 12-514 (549)
20 2z7x_B TOLL-like receptor 1, v 100.0 1.6E-48 5.6E-53 451.2 24.9 438 54-522 21-485 (520)
21 4g8a_A TOLL-like receptor 4; l 100.0 2.3E-46 7.9E-51 444.3 31.7 458 80-543 53-581 (635)
22 4b9d_A Serine/threonine-protei 100.0 2E-47 7E-52 408.7 14.9 204 598-807 23-227 (350)
23 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.1E-46 3.6E-51 439.7 22.3 458 57-546 34-514 (562)
24 4fih_A Serine/threonine-protei 100.0 7.8E-47 2.7E-51 403.5 19.3 198 599-807 74-272 (346)
25 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.1E-47 1.1E-51 400.4 15.9 202 599-807 32-236 (311)
26 4fie_A Serine/threonine-protei 100.0 8.8E-46 3E-50 405.1 20.5 198 599-807 151-349 (423)
27 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3E-45 1E-49 427.5 25.1 437 54-522 52-514 (562)
28 3ubd_A Ribosomal protein S6 ki 100.0 1.4E-46 4.8E-51 395.7 11.1 201 599-807 24-228 (304)
29 3hyh_A Carbon catabolite-derep 100.0 1.2E-45 4.2E-50 383.2 17.3 200 599-807 13-214 (275)
30 1ogq_A PGIP-2, polygalacturona 100.0 2.9E-45 9.8E-50 393.9 20.5 295 2-310 4-307 (313)
31 4g8a_A TOLL-like receptor 4; l 100.0 7.4E-44 2.5E-48 422.8 32.1 487 24-520 11-582 (635)
32 4g3f_A NF-kappa-beta-inducing 100.0 1.2E-45 3.9E-50 393.4 14.4 195 598-807 57-258 (336)
33 3fpq_A Serine/threonine-protei 100.0 6.1E-45 2.1E-49 381.4 19.4 195 602-807 29-231 (290)
34 3omv_A RAF proto-oncogene seri 100.0 2E-45 7E-50 387.9 15.4 200 598-807 35-239 (307)
35 4asz_A BDNF/NT-3 growth factor 100.0 8.1E-46 2.8E-50 391.2 12.3 203 599-808 13-234 (299)
36 4aoj_A High affinity nerve gro 100.0 3.3E-45 1.1E-49 392.0 15.4 202 599-807 41-263 (329)
37 4gt4_A Tyrosine-protein kinase 100.0 2.9E-45 1E-49 388.6 14.5 203 599-807 26-250 (308)
38 1jl5_A Outer protein YOPM; leu 100.0 2.6E-44 8.8E-49 405.7 20.3 386 77-543 9-410 (454)
39 3v47_A TOLL-like receptor 5B a 100.0 1.4E-43 4.7E-48 402.8 24.5 364 79-474 30-412 (455)
40 3v47_A TOLL-like receptor 5B a 100.0 1.7E-43 5.9E-48 402.0 23.9 393 82-547 13-413 (455)
41 4g31_A Eukaryotic translation 100.0 1.3E-43 4.3E-48 375.2 18.0 200 599-807 5-229 (299)
42 1jl5_A Outer protein YOPM; leu 100.0 4.3E-42 1.5E-46 387.5 25.0 406 54-547 11-434 (454)
43 4ase_A Vascular endothelial gr 100.0 4.3E-43 1.5E-47 378.5 13.6 207 596-808 61-291 (353)
44 3hmm_A TGF-beta receptor type- 100.0 4.9E-42 1.7E-46 365.1 17.6 199 599-807 3-220 (303)
45 4b99_A Mitogen-activated prote 100.0 2.1E-41 7.1E-46 372.0 20.9 200 599-807 54-265 (398)
46 3v5w_A G-protein coupled recep 100.0 1E-41 3.5E-46 389.1 17.6 201 598-807 188-393 (689)
47 3bz5_A Internalin-J, INLJ; leu 100.0 7.1E-41 2.4E-45 377.9 23.7 317 74-471 37-353 (457)
48 3bz5_A Internalin-J, INLJ; leu 100.0 1E-40 3.4E-45 376.7 24.4 367 88-548 27-393 (457)
49 4f9c_A Cell division cycle 7-r 100.0 5.8E-41 2E-45 364.7 19.8 197 596-807 18-249 (361)
50 1o6v_A Internalin A; bacterial 100.0 1.5E-39 5.1E-44 370.1 29.1 345 78-495 45-389 (466)
51 1o6v_A Internalin A; bacterial 100.0 3.8E-39 1.3E-43 366.7 28.2 343 55-471 47-389 (466)
52 3uto_A Twitchin; kinase, muscl 100.0 7.3E-40 2.5E-44 377.8 19.6 199 599-807 157-358 (573)
53 2id5_A Lingo-1, leucine rich r 100.0 8.4E-38 2.9E-42 357.2 22.1 302 79-446 32-333 (477)
54 2id5_A Lingo-1, leucine rich r 100.0 1.3E-37 4.5E-42 355.6 23.6 321 130-495 14-334 (477)
55 3fxz_A Serine/threonine-protei 100.0 1.5E-37 5.1E-42 331.5 22.5 238 598-846 19-273 (297)
56 1o6l_A RAC-beta serine/threoni 100.0 1.1E-37 3.7E-42 337.6 20.5 203 598-807 4-207 (337)
57 3txo_A PKC-L, NPKC-ETA, protei 100.0 6.7E-38 2.3E-42 341.5 16.1 205 597-808 21-227 (353)
58 3fe3_A MAP/microtubule affinit 100.0 2.9E-37 1E-41 333.3 20.1 202 597-807 13-216 (328)
59 4dc2_A Protein kinase C IOTA t 100.0 1.3E-37 4.4E-42 343.1 17.3 204 597-807 50-255 (396)
60 1xjd_A Protein kinase C, theta 100.0 2.1E-37 7.3E-42 336.2 18.2 205 596-807 14-220 (345)
61 3o6n_A APL1; leucine-rich repe 100.0 1.4E-36 5E-41 337.4 24.6 310 78-471 44-353 (390)
62 2yab_A Death-associated protei 100.0 8.8E-37 3E-41 333.5 22.3 243 597-846 10-276 (361)
63 4aw2_A Serine/threonine-protei 100.0 8.2E-38 2.8E-42 349.2 13.7 209 593-807 68-283 (437)
64 3a8x_A Protein kinase C IOTA t 100.0 5.2E-37 1.8E-41 333.8 19.3 203 598-807 8-212 (345)
65 2c30_A Serine/threonine-protei 100.0 2E-36 6.7E-41 326.6 23.3 196 601-807 47-243 (321)
66 3v8s_A RHO-associated protein 100.0 7.1E-38 2.4E-42 347.1 12.3 207 593-807 63-275 (410)
67 3a62_A Ribosomal protein S6 ki 100.0 2.4E-37 8.1E-42 334.7 15.9 204 598-807 16-223 (327)
68 3zgw_A Maternal embryonic leuc 100.0 2.7E-37 9.1E-42 335.4 16.4 202 597-807 8-212 (347)
69 1fot_A TPK1 delta, CAMP-depend 100.0 1E-36 3.4E-41 327.6 20.3 200 598-807 5-205 (318)
70 3oja_B Anopheles plasmodium-re 100.0 2.8E-36 9.6E-41 353.6 25.6 310 77-446 49-358 (597)
71 4fcg_A Uncharacterized protein 100.0 1.3E-37 4.6E-42 336.2 13.2 281 2-308 25-314 (328)
72 4fr4_A YANK1, serine/threonine 100.0 6.8E-37 2.3E-41 336.2 18.8 202 598-807 14-219 (384)
73 3soa_A Calcium/calmodulin-depe 100.0 8E-37 2.7E-41 342.6 19.7 204 596-807 8-215 (444)
74 2i0e_A Protein kinase C-beta I 100.0 6.1E-37 2.1E-41 333.7 17.6 204 597-807 18-223 (353)
75 3s95_A LIMK-1, LIM domain kina 100.0 2.2E-36 7.6E-41 324.9 21.7 203 598-809 9-226 (310)
76 3niz_A Rhodanese family protei 100.0 2E-36 7E-41 325.0 20.7 203 597-807 19-222 (311)
77 2vd5_A DMPK protein; serine/th 100.0 1.9E-37 6.3E-42 344.0 12.7 210 592-807 54-272 (412)
78 2r5t_A Serine/threonine-protei 100.0 5E-37 1.7E-41 336.7 15.9 203 598-807 37-241 (373)
79 3p86_A Serine/threonine-protei 100.0 5.3E-37 1.8E-41 329.0 15.5 207 596-808 34-242 (309)
80 4eqm_A Protein kinase; transfe 100.0 3.5E-37 1.2E-41 328.3 13.6 204 598-808 10-215 (294)
81 3tki_A Serine/threonine-protei 100.0 1.3E-36 4.4E-41 328.2 18.2 240 598-846 6-265 (323)
82 3c0i_A Peripheral plasma membr 100.0 1.2E-36 4.2E-41 332.4 17.9 207 598-807 23-235 (351)
83 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.1E-36 7.1E-41 329.5 19.3 200 598-807 40-240 (350)
84 2zv2_A Calcium/calmodulin-depe 100.0 2.6E-36 8.9E-41 322.4 19.4 244 598-848 12-298 (298)
85 2y0a_A Death-associated protei 100.0 3.7E-36 1.3E-40 325.1 20.7 203 598-807 10-219 (326)
86 2bdw_A Hypothetical protein K1 100.0 3.2E-36 1.1E-40 330.0 20.3 202 597-807 27-232 (362)
87 1tki_A Titin; serine kinase, m 100.0 2.1E-36 7.3E-41 326.0 18.2 199 598-807 4-205 (321)
88 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.3E-36 7.8E-41 344.7 18.8 207 598-808 184-392 (543)
89 3o0g_A Cell division protein k 100.0 3.9E-36 1.3E-40 320.0 19.3 200 599-806 2-203 (292)
90 1ob3_A PFPK5, cell division co 100.0 2.2E-36 7.5E-41 321.2 17.2 201 599-807 2-203 (288)
91 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.8E-36 6.3E-41 327.5 16.5 201 598-807 8-210 (336)
92 3uim_A Brassinosteroid insensi 100.0 2.6E-36 8.8E-41 326.9 17.7 217 588-807 19-237 (326)
93 3qd2_B Eukaryotic translation 100.0 3.8E-36 1.3E-40 326.3 18.6 204 597-806 4-277 (332)
94 2pmi_A Negative RE, cyclin-dep 100.0 4.4E-36 1.5E-40 323.4 18.5 204 597-807 3-211 (317)
95 4ejn_A RAC-alpha serine/threon 100.0 2E-36 6.9E-41 342.0 15.8 203 598-807 147-351 (446)
96 2acx_A G protein-coupled recep 100.0 3.7E-36 1.3E-40 343.5 17.8 206 597-808 182-388 (576)
97 2qkw_B Protein kinase; three-h 100.0 5.4E-36 1.8E-40 323.5 18.1 208 593-807 33-243 (321)
98 1kob_A Twitchin; kinase, intra 100.0 1.3E-35 4.5E-40 327.2 21.2 200 598-807 50-252 (387)
99 3kn6_A Ribosomal protein S6 ki 100.0 7.9E-36 2.7E-40 322.3 18.7 192 604-808 16-212 (325)
100 2psq_A Fibroblast growth facto 100.0 5.1E-36 1.8E-40 329.6 17.3 204 598-807 80-308 (370)
101 4euu_A Serine/threonine-protei 100.0 1.5E-35 5.2E-40 319.7 19.8 205 598-809 8-227 (319)
102 3cok_A Serine/threonine-protei 100.0 1.3E-35 4.6E-40 313.5 19.0 243 598-846 10-266 (278)
103 2y94_A 5'-AMP-activated protei 100.0 1.5E-35 5E-40 334.4 19.8 202 598-807 15-218 (476)
104 2w4o_A Calcium/calmodulin-depe 100.0 8.1E-36 2.8E-40 325.5 16.9 198 597-807 51-252 (349)
105 3e7e_A HBUB1, BUB1A, mitotic c 100.0 7.8E-36 2.7E-40 328.3 16.7 203 596-808 62-288 (365)
106 3o6n_A APL1; leucine-rich repe 100.0 4.6E-35 1.6E-39 325.3 22.8 311 149-520 43-354 (390)
107 2rku_A Serine/threonine-protei 100.0 3.8E-35 1.3E-39 312.7 20.8 204 598-808 14-218 (294)
108 4agu_A Cyclin-dependent kinase 100.0 2.7E-35 9.3E-40 316.6 19.6 202 599-808 3-206 (311)
109 3dls_A PAS domain-containing s 100.0 9.9E-36 3.4E-40 322.8 16.3 243 597-846 22-278 (335)
110 2qr7_A Ribosomal protein S6 ki 100.0 9.4E-36 3.2E-40 323.5 16.1 198 596-807 19-222 (342)
111 2nru_A Interleukin-1 receptor- 100.0 7.6E-35 2.6E-39 312.5 22.8 216 589-809 15-238 (307)
112 3kul_A Ephrin type-A receptor 100.0 2.5E-35 8.5E-40 318.5 18.9 202 598-807 48-257 (325)
113 2owb_A Serine/threonine-protei 100.0 3.8E-35 1.3E-39 318.7 20.0 204 597-807 39-243 (335)
114 2a2a_A Death-associated protei 100.0 4.2E-35 1.4E-39 316.5 20.1 203 598-807 11-220 (321)
115 3pfq_A PKC-B, PKC-beta, protei 100.0 2.6E-35 9E-40 347.5 20.2 205 597-808 339-545 (674)
116 2x4f_A Myosin light chain kina 100.0 2.1E-35 7.2E-40 324.7 18.0 197 601-807 91-290 (373)
117 3uc3_A Serine/threonine-protei 100.0 1.5E-35 5.2E-40 324.7 16.7 200 597-808 18-221 (361)
118 3kk8_A Calcium/calmodulin depe 100.0 5.9E-35 2E-39 309.6 20.3 202 597-807 4-209 (284)
119 3gni_B Strad alpha; kinase fol 100.0 6.1E-35 2.1E-39 324.1 20.7 205 597-807 23-239 (389)
120 3ork_A Serine/threonine protei 100.0 4.9E-36 1.7E-40 322.3 11.4 203 598-807 11-221 (311)
121 2eue_A Carbon catabolite derep 100.0 3.5E-35 1.2E-39 309.7 17.6 201 599-808 13-215 (275)
122 3hko_A Calcium/calmodulin-depe 100.0 2.3E-35 8E-40 322.1 16.8 211 594-807 21-278 (345)
123 3f3z_A Calcium/calmodulin-depe 100.0 6.4E-35 2.2E-39 308.1 19.6 238 597-846 7-265 (277)
124 3g33_A Cell division protein k 100.0 5.5E-35 1.9E-39 313.7 19.4 205 597-807 7-221 (308)
125 2yex_A Serine/threonine-protei 100.0 1.2E-34 4.1E-39 305.8 21.4 241 597-846 5-265 (276)
126 4fmz_A Internalin; leucine ric 100.0 2E-34 6.9E-39 314.9 23.7 306 147-541 40-345 (347)
127 3oja_B Anopheles plasmodium-re 100.0 8.8E-35 3E-39 340.9 22.0 311 150-520 50-360 (597)
128 4hcu_A Tyrosine-protein kinase 100.0 2.8E-35 9.4E-40 309.5 15.9 200 598-807 9-210 (269)
129 2y7j_A Phosphorylase B kinase 100.0 8.3E-35 2.8E-39 319.5 20.3 251 591-848 86-365 (365)
130 2qol_A Ephrin receptor; recept 100.0 3.6E-35 1.2E-39 323.1 17.4 202 598-807 44-253 (373)
131 3fdn_A Serine/threonine-protei 100.0 3.3E-35 1.1E-39 310.6 16.5 202 597-807 7-209 (279)
132 3lb7_A RAF proto-oncogene seri 100.0 1.1E-34 3.9E-39 310.6 20.5 200 598-807 35-239 (307)
133 1nxk_A MAP kinase-activated pr 100.0 4.6E-35 1.6E-39 325.2 17.9 195 599-807 61-265 (400)
134 3p1a_A MYT1 kinase, membrane-a 100.0 6.9E-35 2.3E-39 313.2 18.7 239 599-847 57-309 (311)
135 4fmz_A Internalin; leucine ric 100.0 2.4E-34 8.3E-39 314.3 23.3 176 359-546 153-328 (347)
136 3sxs_A Cytoplasmic tyrosine-pr 100.0 5E-35 1.7E-39 307.3 16.7 201 598-808 7-209 (268)
137 3is5_A Calcium-dependent prote 100.0 7E-35 2.4E-39 309.1 18.0 242 598-847 21-283 (285)
138 3mtl_A Cell division protein k 100.0 1.9E-35 6.7E-40 319.4 13.8 200 599-807 2-203 (324)
139 4aaa_A Cyclin-dependent kinase 100.0 7E-35 2.4E-39 316.2 18.2 203 598-808 24-228 (331)
140 1ogq_A PGIP-2, polygalacturona 100.0 1.7E-35 5.7E-40 317.8 12.7 249 79-348 50-302 (313)
141 1vzo_A Ribosomal protein S6 ki 100.0 9.3E-36 3.2E-40 325.9 10.9 204 598-807 53-264 (355)
142 3ugc_A Tyrosine-protein kinase 100.0 3.3E-35 1.1E-39 313.3 14.4 203 598-809 9-221 (295)
143 3cbl_A C-FES, proto-oncogene t 100.0 1.6E-35 5.5E-40 326.9 12.1 204 597-808 112-319 (377)
144 2izr_A Casein kinase I isoform 100.0 3.9E-35 1.3E-39 318.0 14.9 199 598-808 8-220 (330)
145 3oz6_A Mitogen-activated prote 100.0 9.6E-35 3.3E-39 322.3 18.3 201 597-807 7-233 (388)
146 3soc_A Activin receptor type-2 100.0 4.4E-35 1.5E-39 316.3 14.9 202 597-808 22-241 (322)
147 3dtc_A Mitogen-activated prote 100.0 8.3E-35 2.8E-39 306.2 16.6 204 598-808 6-217 (271)
148 3a7i_A MST3 kinase, serine/thr 100.0 1.5E-34 5.1E-39 309.6 18.9 200 598-807 21-221 (303)
149 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.7E-35 1.3E-39 317.9 14.2 203 596-807 31-240 (329)
150 3lm5_A Serine/threonine-protei 100.0 1.6E-34 5.6E-39 312.6 19.2 210 591-807 20-235 (327)
151 1u5q_A Serine/threonine protei 100.0 6.3E-35 2.2E-39 317.9 16.0 198 599-807 54-255 (348)
152 3gen_A Tyrosine-protein kinase 100.0 8E-35 2.7E-39 308.4 16.4 202 597-808 22-225 (283)
153 3i6u_A CDS1, serine/threonine- 100.0 1.4E-34 4.7E-39 323.7 19.0 242 597-846 133-403 (419)
154 2clq_A Mitogen-activated prote 100.0 2.4E-34 8.2E-39 306.7 20.1 201 600-807 23-227 (295)
155 2ac3_A MAP kinase-interacting 100.0 1.1E-34 3.8E-39 312.5 17.6 200 598-807 11-228 (316)
156 2vgo_A Serine/threonine-protei 100.0 9.3E-35 3.2E-39 308.1 16.6 201 598-807 13-214 (284)
157 3ttj_A Mitogen-activated prote 100.0 8.4E-35 2.9E-39 329.0 17.0 198 598-807 61-265 (464)
158 2h34_A Serine/threonine-protei 100.0 7.4E-35 2.5E-39 312.7 15.6 205 597-808 32-238 (309)
159 3dbq_A Dual specificity protei 100.0 6.4E-35 2.2E-39 318.0 15.2 201 597-807 7-222 (343)
160 3tt0_A Basic fibroblast growth 100.0 1.4E-34 4.9E-39 319.9 18.3 204 598-807 68-296 (382)
161 3bhy_A Death-associated protei 100.0 1.7E-34 5.9E-39 305.8 17.9 203 598-807 4-213 (283)
162 3nyv_A Calmodulin-domain prote 100.0 9.3E-35 3.2E-39 332.2 16.9 201 598-807 25-229 (484)
163 1ua2_A CAK, cell division prot 100.0 1.3E-34 4.3E-39 316.1 17.1 206 596-807 7-215 (346)
164 3llt_A Serine/threonine kinase 100.0 2.2E-34 7.7E-39 316.2 19.3 199 596-807 32-261 (360)
165 4eut_A Serine/threonine-protei 100.0 7.3E-35 2.5E-39 323.8 15.3 205 598-809 8-227 (396)
166 4f0f_A Serine/threonine-protei 100.0 1.9E-34 6.4E-39 306.2 17.8 202 598-809 18-232 (287)
167 1luf_A Muscle-specific tyrosin 100.0 8.1E-35 2.8E-39 317.5 15.2 206 596-807 44-279 (343)
168 3n9x_A Phosphotransferase; mal 100.0 3.4E-34 1.2E-38 322.0 20.7 200 598-806 25-253 (432)
169 3rp9_A Mitogen-activated prote 100.0 2.2E-34 7.6E-39 326.7 19.3 195 598-801 52-280 (458)
170 3mwu_A Calmodulin-domain prote 100.0 1.5E-34 5.2E-39 330.3 18.0 200 598-807 21-224 (486)
171 3com_A Serine/threonine-protei 100.0 2.9E-34 1E-38 309.0 18.9 239 597-846 27-282 (314)
172 3q5i_A Protein kinase; CDPK, m 100.0 2.6E-34 8.7E-39 329.8 19.5 242 597-846 34-305 (504)
173 3eqc_A Dual specificity mitoge 100.0 5.3E-35 1.8E-39 321.1 13.3 200 598-807 32-232 (360)
174 2eva_A TAK1 kinase - TAB1 chim 100.0 8.1E-35 2.8E-39 312.0 14.2 199 598-808 7-206 (307)
175 3byv_A Rhoptry kinase; malaria 100.0 2.6E-35 8.9E-40 325.4 10.7 239 598-845 72-362 (377)
176 3l9p_A Anaplastic lymphoma kin 100.0 8.5E-35 2.9E-39 319.7 14.6 204 598-807 70-289 (367)
177 2zmd_A Dual specificity protei 100.0 1.4E-34 4.9E-39 320.3 16.4 200 598-807 55-269 (390)
178 3vhe_A Vascular endothelial gr 100.0 5.4E-35 1.8E-39 321.1 12.8 210 593-808 16-299 (359)
179 2r3i_A Cell division protein k 100.0 3.2E-34 1.1E-38 306.4 17.7 202 599-807 3-206 (299)
180 3lij_A Calcium/calmodulin depe 100.0 3.5E-34 1.2E-38 327.8 19.3 200 598-807 36-239 (494)
181 1qcf_A Haematopoetic cell kina 100.0 7.5E-35 2.6E-39 329.5 13.5 201 597-807 186-388 (454)
182 2ivs_A Proto-oncogene tyrosine 100.0 2.3E-34 8E-39 309.7 16.7 205 597-807 21-255 (314)
183 3op5_A Serine/threonine-protei 100.0 2.3E-35 7.7E-40 324.4 8.8 205 597-807 33-263 (364)
184 1rjb_A FL cytokine receptor; k 100.0 1.8E-34 6.1E-39 314.9 15.8 206 597-808 43-278 (344)
185 1cm8_A Phosphorylated MAP kina 100.0 4.2E-34 1.4E-38 314.0 18.8 197 598-807 24-228 (367)
186 3qup_A Tyrosine-protein kinase 100.0 1.3E-34 4.6E-39 312.9 14.5 206 597-807 21-242 (323)
187 2h6d_A 5'-AMP-activated protei 100.0 2.1E-34 7.1E-39 304.0 15.6 202 598-807 10-213 (276)
188 2jam_A Calcium/calmodulin-depe 100.0 2.5E-34 8.6E-39 307.9 16.4 199 597-807 7-209 (304)
189 2pvf_A Fibroblast growth facto 100.0 4.6E-34 1.6E-38 310.2 18.2 204 598-807 34-262 (334)
190 1t46_A HOMO sapiens V-KIT hard 100.0 1.9E-34 6.4E-39 310.3 14.9 206 597-808 21-251 (313)
191 1t4h_A Serine/threonine-protei 100.0 1E-33 3.5E-38 301.0 20.5 198 599-807 26-231 (290)
192 3q4u_A Activin receptor type-1 100.0 5E-34 1.7E-38 305.2 18.0 189 598-801 7-219 (301)
193 1k9a_A Carboxyl-terminal SRC k 100.0 2.1E-34 7E-39 325.3 15.6 197 598-808 192-390 (450)
194 3kex_A Receptor tyrosine-prote 100.0 2.5E-34 8.6E-39 310.9 15.1 201 598-807 12-220 (325)
195 2ycf_A Serine/threonine-protei 100.0 4.7E-34 1.6E-38 308.4 17.0 241 598-846 9-278 (322)
196 2j7t_A Serine/threonine-protei 100.0 2E-34 6.8E-39 308.4 13.9 203 597-808 17-225 (302)
197 1qpc_A LCK kinase; alpha beta 100.0 2.8E-34 9.5E-39 303.6 14.8 201 597-807 11-213 (279)
198 1mp8_A Focal adhesion kinase 1 100.0 3.6E-34 1.2E-38 303.0 15.6 202 597-807 13-220 (281)
199 2wqm_A Serine/threonine-protei 100.0 3.8E-34 1.3E-38 307.4 15.9 206 598-807 31-238 (310)
200 4fvq_A Tyrosine-protein kinase 100.0 3.4E-34 1.2E-38 304.5 15.3 195 598-805 7-218 (289)
201 1opk_A P150, C-ABL, proto-onco 100.0 1.4E-34 4.8E-39 330.4 13.2 202 598-808 219-423 (495)
202 2wtk_C Serine/threonine-protei 100.0 1E-33 3.4E-38 303.4 19.0 205 598-807 4-215 (305)
203 1x8b_A WEE1HU, WEE1-like prote 100.0 6E-34 2E-38 302.4 17.0 201 597-806 9-232 (289)
204 4e5w_A Tyrosine-protein kinase 100.0 3.6E-34 1.2E-38 306.5 15.3 202 598-807 20-231 (302)
205 3t9t_A Tyrosine-protein kinase 100.0 3.2E-34 1.1E-38 301.0 14.7 200 598-807 7-208 (267)
206 3mi9_A Cell division protein k 100.0 1.5E-33 5.1E-38 308.4 20.6 202 598-807 16-231 (351)
207 2w5a_A Serine/threonine-protei 100.0 1.5E-34 5.1E-39 305.6 12.0 206 598-808 5-219 (279)
208 3nsz_A CK II alpha, casein kin 100.0 1.2E-33 4.2E-38 306.4 19.5 193 598-807 35-233 (330)
209 3poz_A Epidermal growth factor 100.0 2.5E-34 8.5E-39 311.1 14.0 201 598-807 14-222 (327)
210 1csn_A Casein kinase-1; phosph 100.0 6.3E-34 2.1E-38 303.9 16.8 198 598-807 9-220 (298)
211 3kfa_A Tyrosine-protein kinase 100.0 1.8E-34 6.2E-39 306.5 12.4 202 597-807 11-215 (288)
212 2vwi_A Serine/threonine-protei 100.0 2.4E-34 8.1E-39 307.9 13.2 206 596-807 12-229 (303)
213 2v62_A Serine/threonine-protei 100.0 3.5E-34 1.2E-38 312.4 14.8 203 598-807 36-262 (345)
214 3lxp_A Non-receptor tyrosine-p 100.0 9.6E-34 3.3E-38 305.3 17.9 198 601-808 33-240 (318)
215 3kmu_A ILK, integrin-linked ki 100.0 6.7E-34 2.3E-38 299.1 16.3 198 598-807 9-213 (271)
216 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.9E-34 6.5E-39 325.8 12.7 200 598-807 183-384 (452)
217 3pg1_A Mitogen-activated prote 100.0 9.3E-34 3.2E-38 311.5 17.8 210 591-807 14-236 (362)
218 2ft3_A Biglycan; proteoglycan, 100.0 4.9E-33 1.7E-37 301.7 23.2 176 103-285 54-231 (332)
219 2pml_X PFPK7, Ser/Thr protein 100.0 7.4E-34 2.5E-38 310.6 16.8 204 598-808 30-255 (348)
220 3lxl_A Tyrosine-protein kinase 100.0 6.7E-34 2.3E-38 308.0 16.1 203 598-809 22-234 (327)
221 2x7f_A TRAF2 and NCK-interacti 100.0 6.6E-34 2.2E-38 308.0 16.0 203 596-807 21-236 (326)
222 3og7_A AKAP9-BRAF fusion prote 100.0 7.9E-34 2.7E-38 301.6 16.3 201 597-807 22-227 (289)
223 4e7w_A Glycogen synthase kinas 100.0 5.1E-34 1.7E-38 316.5 15.4 198 598-807 39-244 (394)
224 1u59_A Tyrosine-protein kinase 100.0 1.4E-33 4.7E-38 299.5 18.0 202 598-808 8-217 (287)
225 1phk_A Phosphorylase kinase; g 100.0 2.4E-33 8.2E-38 299.4 19.9 205 596-807 14-231 (298)
226 2ft3_A Biglycan; proteoglycan, 100.0 6.8E-33 2.3E-37 300.6 23.7 267 176-492 55-331 (332)
227 1xku_A Decorin; proteoglycan, 100.0 7.9E-33 2.7E-37 299.9 24.2 178 103-286 52-231 (330)
228 1p4o_A Insulin-like growth fac 100.0 2.3E-34 8E-39 310.9 12.1 207 595-807 21-243 (322)
229 3kvw_A DYRK2, dual specificity 100.0 1.2E-33 4.2E-38 316.7 18.2 198 598-808 96-302 (429)
230 3qyz_A Mitogen-activated prote 100.0 1.7E-33 5.8E-38 309.4 18.9 200 597-807 25-234 (364)
231 1mqb_A Ephrin type-A receptor 100.0 1.4E-33 4.9E-38 305.9 17.6 202 598-807 43-253 (333)
232 3eb0_A Putative uncharacterize 100.0 1.9E-33 6.3E-38 311.3 18.8 199 596-807 4-244 (383)
233 3c1x_A Hepatocyte growth facto 100.0 4.2E-34 1.4E-38 314.2 13.4 201 599-807 89-299 (373)
234 2buj_A Serine/threonine-protei 100.0 5.8E-34 2E-38 307.1 14.3 204 597-807 27-248 (317)
235 2fst_X Mitogen-activated prote 100.0 7.4E-34 2.5E-38 311.7 15.3 197 598-807 28-232 (367)
236 3q60_A ROP5B; pseudokinase, tr 100.0 3.9E-34 1.3E-38 315.4 12.9 200 598-808 61-296 (371)
237 2xrw_A Mitogen-activated prote 100.0 1.6E-33 5.6E-38 310.2 17.7 198 598-807 24-228 (371)
238 2jii_A Serine/threonine-protei 100.0 1.7E-34 5.8E-39 316.0 8.8 198 598-809 41-272 (352)
239 3lzb_A Epidermal growth factor 100.0 1.1E-33 3.7E-38 306.0 14.9 202 598-808 14-223 (327)
240 3f66_A Hepatocyte growth facto 100.0 1.9E-33 6.6E-38 300.2 16.4 201 598-806 24-234 (298)
241 1xbb_A Tyrosine-protein kinase 100.0 1.2E-33 4.1E-38 300.6 14.7 203 597-808 14-224 (291)
242 1blx_A Cyclin-dependent kinase 100.0 1.7E-33 5.7E-38 304.8 15.8 204 596-807 8-221 (326)
243 3cc6_A Protein tyrosine kinase 100.0 1.6E-33 5.6E-38 298.0 15.3 202 597-807 10-217 (281)
244 3brb_A Proto-oncogene tyrosine 100.0 1.7E-33 5.9E-38 302.8 15.7 208 595-807 30-252 (313)
245 4exu_A Mitogen-activated prote 100.0 3.8E-33 1.3E-37 307.3 18.5 196 598-807 41-244 (371)
246 4hgt_A Casein kinase I isoform 100.0 2.6E-33 8.8E-38 298.8 16.5 200 597-808 7-218 (296)
247 1z7x_W Ribonuclease inhibitor; 100.0 1.7E-37 5.7E-42 353.3 -17.1 135 79-213 3-156 (461)
248 2i1m_A Macrophage colony-stimu 100.0 7.1E-34 2.4E-38 308.7 12.3 206 596-807 43-269 (333)
249 2xir_A Vascular endothelial gr 100.0 1.2E-33 4.2E-38 304.3 13.8 209 594-808 22-254 (316)
250 3uzp_A CKI-delta, CKID, casein 100.0 3.4E-33 1.2E-37 297.9 17.1 199 597-807 7-217 (296)
251 3pls_A Macrophage-stimulating 100.0 3.1E-33 1E-37 298.6 16.7 198 600-805 22-228 (298)
252 2ozo_A Tyrosine-protein kinase 100.0 3E-33 1E-37 327.0 17.7 200 600-808 336-543 (613)
253 1j1b_A Glycogen synthase kinas 100.0 2.4E-33 8.2E-38 313.7 16.2 197 598-807 53-259 (420)
254 2a19_B Interferon-induced, dou 100.0 2.1E-33 7.2E-38 297.6 14.8 197 597-806 9-222 (284)
255 3an0_A Dual specificity mitoge 100.0 2.6E-33 9E-38 305.1 15.8 205 597-808 49-260 (340)
256 1xku_A Decorin; proteoglycan, 100.0 3E-32 1E-36 295.3 24.0 289 128-492 32-330 (330)
257 3rgf_A Cyclin-dependent kinase 100.0 9.8E-34 3.4E-38 316.0 12.6 199 599-807 20-238 (405)
258 2h8h_A Proto-oncogene tyrosine 100.0 5.7E-34 2E-38 328.3 10.9 200 598-807 266-467 (535)
259 3e3p_A Protein kinase, putativ 100.0 2E-33 6.9E-38 308.6 14.6 206 592-807 16-234 (360)
260 2b9h_A MAP kinase FUS3, mitoge 100.0 4.6E-33 1.6E-37 304.9 17.3 200 598-808 10-226 (353)
261 3fme_A Dual specificity mitoge 100.0 2.1E-33 7E-38 298.6 14.1 205 598-808 6-216 (290)
262 2w1i_A JAK2; chromosomal rearr 100.0 3.8E-33 1.3E-37 301.8 16.4 202 598-808 40-251 (326)
263 1fvr_A Tyrosine-protein kinase 100.0 3.2E-33 1.1E-37 302.6 15.4 203 598-807 24-244 (327)
264 2wei_A Calmodulin-domain prote 100.0 4E-33 1.4E-37 295.9 15.8 201 597-807 20-224 (287)
265 1byg_A CSK, protein (C-termina 100.0 2.2E-33 7.4E-38 296.5 13.5 196 598-807 20-217 (278)
266 1wak_A Serine/threonine-protei 100.0 2.7E-33 9.3E-38 311.9 15.0 198 598-807 36-295 (397)
267 2i6l_A Mitogen-activated prote 100.0 4.8E-33 1.6E-37 300.2 16.4 199 598-808 10-228 (320)
268 3coi_A Mitogen-activated prote 100.0 8.6E-33 3E-37 302.6 18.4 196 598-807 23-226 (353)
269 1z57_A Dual specificity protei 100.0 7E-33 2.4E-37 301.5 17.6 198 598-808 13-237 (339)
270 3ll6_A Cyclin G-associated kin 100.0 4.1E-33 1.4E-37 303.1 15.6 203 597-807 26-255 (337)
271 1z7x_W Ribonuclease inhibitor; 100.0 3.9E-37 1.3E-41 350.3 -17.7 111 385-495 313-441 (461)
272 3cek_A Dual specificity protei 100.0 5.8E-33 2E-37 298.7 15.8 202 596-807 25-241 (313)
273 3sv0_A Casein kinase I-like; t 100.0 9.1E-33 3.1E-37 312.2 17.9 199 598-808 6-216 (483)
274 3fhr_A MAP kinase-activated pr 100.0 5E-33 1.7E-37 301.9 15.0 198 597-808 26-232 (336)
275 1u46_A ACK-1, activated CDC42 100.0 4.1E-33 1.4E-37 296.5 14.1 204 598-808 17-228 (291)
276 2yfx_A Tyrosine-protein kinase 100.0 4.2E-33 1.4E-37 301.7 14.4 204 598-807 29-248 (327)
277 1zy4_A Serine/threonine-protei 100.0 4.9E-33 1.7E-37 297.6 14.3 194 597-800 4-226 (303)
278 3gxj_A TGF-beta receptor type- 100.0 3.3E-34 1.1E-38 306.8 4.7 189 598-801 2-214 (303)
279 4fl3_A Tyrosine-protein kinase 100.0 6E-33 2.1E-37 325.1 15.8 195 605-808 375-576 (635)
280 3a99_A Proto-oncogene serine/t 100.0 2.2E-33 7.4E-38 302.8 11.1 243 596-846 40-297 (320)
281 3qa8_A MGC80376 protein; kinas 100.0 7.3E-33 2.5E-37 319.1 15.8 203 598-807 13-225 (676)
282 2iwi_A Serine/threonine-protei 100.0 3.7E-33 1.3E-37 300.0 11.6 244 595-846 27-287 (312)
283 3g2f_A Bone morphogenetic prot 100.0 6.4E-33 2.2E-37 301.5 13.1 198 597-806 11-236 (336)
284 3mdy_A Bone morphogenetic prot 100.0 3.3E-32 1.1E-36 296.0 18.8 195 596-802 34-249 (337)
285 3aln_A Dual specificity mitoge 100.0 1.6E-32 5.4E-37 297.2 16.0 204 598-808 21-232 (327)
286 2vx3_A Dual specificity tyrosi 100.0 2.6E-32 8.8E-37 302.0 17.9 198 597-807 52-260 (382)
287 1b6c_B TGF-B superfamily recep 100.0 3E-32 1E-36 297.0 17.8 198 595-807 38-269 (342)
288 2eu9_A Dual specificity protei 100.0 4E-32 1.4E-36 297.6 17.4 197 598-807 18-241 (355)
289 1q8y_A SR protein kinase; tran 100.0 1.7E-32 5.7E-37 302.9 14.2 199 598-808 18-238 (373)
290 2rio_A Serine/threonine-protei 100.0 1.4E-32 4.9E-37 308.8 13.6 198 599-807 15-242 (434)
291 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.9E-33 2.3E-37 299.0 9.9 203 596-808 30-246 (319)
292 2dyl_A Dual specificity mitoge 100.0 3.2E-32 1.1E-36 293.5 15.0 201 598-807 24-231 (318)
293 3p23_A Serine/threonine-protei 100.0 2.2E-32 7.6E-37 306.2 13.7 198 597-807 22-232 (432)
294 2j0j_A Focal adhesion kinase 1 100.0 2.5E-32 8.7E-37 321.0 14.8 202 597-807 388-595 (656)
295 2vuw_A Serine/threonine-protei 100.0 2.7E-33 9.4E-38 304.3 5.5 196 597-806 18-278 (336)
296 3ogk_B Coronatine-insensitive 100.0 4.2E-35 1.4E-39 344.6 -10.1 430 41-520 41-528 (592)
297 2pzi_A Probable serine/threoni 100.0 1E-31 3.6E-36 319.1 14.8 193 598-807 79-278 (681)
298 2z80_A TOLL-like receptor 2, v 100.0 1.6E-31 5.5E-36 292.4 13.8 281 38-353 26-317 (353)
299 3uqc_A Probable conserved tran 100.0 1E-30 3.5E-35 276.5 16.3 175 599-809 31-206 (286)
300 3m2w_A MAP kinase-activated pr 100.0 2.4E-30 8.3E-35 276.2 17.8 213 599-846 17-260 (299)
301 3dzo_A Rhoptry kinase domain; 100.0 6.5E-31 2.2E-35 293.3 12.7 202 598-808 77-320 (413)
302 2z66_A Variable lymphocyte rec 100.0 2.7E-30 9.2E-35 276.8 16.1 252 42-310 7-263 (306)
303 3ogk_B Coronatine-insensitive 100.0 2.1E-33 7.2E-38 330.1 -11.1 406 95-544 65-528 (592)
304 4fcg_A Uncharacterized protein 100.0 9.7E-30 3.3E-34 274.5 17.8 228 52-285 79-315 (328)
305 2z66_A Variable lymphocyte rec 100.0 1.5E-29 5E-34 271.1 18.0 263 176-504 29-297 (306)
306 2z80_A TOLL-like receptor 2, v 100.0 5.3E-30 1.8E-34 280.4 14.1 204 79-285 31-236 (353)
307 3oja_A Leucine-rich immune mol 100.0 6.3E-32 2.1E-36 307.6 -2.1 235 247-537 34-270 (487)
308 1wwl_A Monocyte differentiatio 100.0 3.6E-31 1.2E-35 284.1 3.2 249 75-351 39-310 (312)
309 3g06_A SSPH2 (leucine-rich rep 100.0 2.5E-29 8.6E-34 291.7 14.0 267 81-433 42-308 (622)
310 1wwl_A Monocyte differentiatio 100.0 1.1E-30 3.8E-35 280.3 2.4 260 39-309 28-310 (312)
311 1ozn_A Reticulon 4 receptor; N 100.0 6.5E-29 2.2E-33 263.1 15.0 237 77-314 30-267 (285)
312 3zyi_A Leucine-rich repeat-con 100.0 1.9E-28 6.6E-33 277.3 19.0 229 79-309 75-304 (452)
313 3zyi_A Leucine-rich repeat-con 100.0 2.9E-28 1E-32 275.8 20.1 249 81-352 56-305 (452)
314 3zyj_A Leucine-rich repeat-con 100.0 3.2E-28 1.1E-32 274.5 19.9 228 79-308 64-292 (440)
315 3zyj_A Leucine-rich repeat-con 100.0 3.8E-28 1.3E-32 273.9 20.4 246 84-352 48-294 (440)
316 1ozn_A Reticulon 4 receptor; N 100.0 1.8E-28 6.3E-33 259.6 16.8 247 84-333 16-268 (285)
317 4azs_A Methyltransferase WBDD; 100.0 6.3E-30 2.2E-34 295.0 5.2 190 606-805 241-438 (569)
318 3g06_A SSPH2 (leucine-rich rep 100.0 2.5E-27 8.6E-32 274.9 25.4 269 103-481 40-308 (622)
319 3o53_A Protein LRIM1, AGAP0063 100.0 2.9E-29 1E-33 269.9 5.8 245 221-497 32-279 (317)
320 2p1m_B Transport inhibitor res 99.9 8.8E-32 3E-36 316.4 -15.7 457 41-540 34-542 (594)
321 2o6q_A Variable lymphocyte rec 99.9 2.6E-27 9E-32 248.4 19.4 217 39-284 2-218 (270)
322 3o53_A Protein LRIM1, AGAP0063 99.9 4E-29 1.4E-33 268.8 5.4 269 81-381 12-283 (317)
323 3oja_A Leucine-rich immune mol 99.9 3E-27 1E-31 269.0 8.5 234 224-489 35-270 (487)
324 2z62_A TOLL-like receptor 4, v 99.9 3.9E-26 1.3E-30 240.5 15.5 206 79-285 28-238 (276)
325 2z62_A TOLL-like receptor 4, v 99.9 2.3E-25 8E-30 234.5 18.6 210 337-547 28-242 (276)
326 2p1m_B Transport inhibitor res 99.9 4.8E-29 1.6E-33 293.1 -10.9 407 76-515 102-541 (594)
327 3rfs_A Internalin B, repeat mo 99.9 6.3E-26 2.2E-30 238.1 12.8 226 79-317 19-244 (272)
328 3rfs_A Internalin B, repeat mo 99.9 3.3E-25 1.1E-29 232.6 15.3 211 75-296 37-247 (272)
329 2o6q_A Variable lymphocyte rec 99.9 2.2E-24 7.5E-29 226.1 20.1 206 337-545 16-221 (270)
330 4glp_A Monocyte differentiatio 99.9 5.2E-25 1.8E-29 236.0 15.2 225 79-309 64-308 (310)
331 3m19_A Variable lymphocyte rec 99.9 8.1E-25 2.8E-29 226.8 16.1 191 39-260 2-192 (251)
332 1p9a_G Platelet glycoprotein I 99.9 1.3E-24 4.5E-29 229.9 17.3 203 75-284 6-208 (290)
333 3en9_A Glycoprotease, O-sialog 99.9 7E-26 2.4E-30 259.8 7.8 188 602-806 339-539 (540)
334 3goz_A Leucine-rich repeat-con 99.9 1.1E-26 3.8E-31 254.6 0.1 264 83-357 2-304 (362)
335 1p9a_G Platelet glycoprotein I 99.9 2.6E-24 9E-29 227.6 16.3 205 98-309 5-209 (290)
336 2ast_B S-phase kinase-associat 99.9 1E-26 3.6E-31 252.4 -4.2 264 41-315 36-313 (336)
337 4glp_A Monocyte differentiatio 99.9 2.2E-24 7.5E-29 231.1 12.6 203 77-285 89-308 (310)
338 2xwt_C Thyrotropin receptor; s 99.9 1.2E-23 4.1E-28 216.3 15.5 196 80-281 32-236 (239)
339 3goz_A Leucine-rich repeat-con 99.9 1.3E-25 4.6E-30 246.0 0.2 263 107-400 2-299 (362)
340 2xwt_C Thyrotropin receptor; s 99.9 1.1E-23 3.6E-28 216.7 13.4 203 94-305 25-236 (239)
341 2o6s_A Variable lymphocyte rec 99.9 4.4E-23 1.5E-27 207.2 15.3 184 41-247 6-189 (208)
342 2ca6_A RAN GTPase-activating p 99.9 1.2E-25 4.1E-30 248.9 -4.5 239 74-312 27-320 (386)
343 3m19_A Variable lymphocyte rec 99.9 1.1E-22 3.9E-27 210.6 17.7 159 386-544 36-194 (251)
344 2ca6_A RAN GTPase-activating p 99.9 5.4E-26 1.8E-30 251.7 -8.4 113 431-543 185-317 (386)
345 1h6u_A Internalin H; cell adhe 99.9 5.2E-23 1.8E-27 219.8 14.2 195 75-285 37-231 (308)
346 2ast_B S-phase kinase-associat 99.9 1.2E-24 4.1E-29 236.1 1.2 256 81-383 49-315 (336)
347 1h6u_A Internalin H; cell adhe 99.9 9.7E-23 3.3E-27 217.7 14.9 211 82-310 22-232 (308)
348 3cvr_A Invasion plasmid antige 99.9 1.7E-23 5.9E-28 239.7 8.5 210 25-295 32-254 (571)
349 4ay9_X Follicle-stimulating ho 99.9 4E-22 1.4E-26 217.2 15.7 203 42-262 9-217 (350)
350 2o6s_A Variable lymphocyte rec 99.9 1E-21 3.5E-26 197.2 16.1 180 83-272 11-190 (208)
351 1zar_A RIO2 kinase; serine kin 99.9 1.9E-22 6.5E-27 211.9 10.6 166 594-790 85-274 (282)
352 4ay9_X Follicle-stimulating ho 99.9 1.2E-21 4.1E-26 213.4 15.0 216 83-302 13-233 (350)
353 3cvr_A Invasion plasmid antige 99.9 8.5E-22 2.9E-26 225.6 14.4 188 104-319 60-254 (571)
354 4b8c_D Glucose-repressible alc 99.9 1.2E-22 4.2E-27 241.5 4.9 229 3-257 131-369 (727)
355 3e6j_A Variable lymphocyte rec 99.8 1.1E-20 3.9E-25 192.3 15.7 160 37-213 14-173 (229)
356 1dce_A Protein (RAB geranylger 99.8 1.5E-22 5.2E-27 233.3 -3.9 203 76-301 346-566 (567)
357 1m9s_A Internalin B; cell inva 99.8 1E-20 3.6E-25 219.2 11.5 190 81-286 23-212 (605)
358 1h6t_A Internalin B; cell adhe 99.8 1E-20 3.6E-25 200.1 9.4 187 83-285 28-214 (291)
359 1h6t_A Internalin B; cell adhe 99.8 1.8E-20 6.1E-25 198.3 10.8 174 75-262 42-215 (291)
360 1m9s_A Internalin B; cell inva 99.8 6.3E-20 2.2E-24 212.6 13.6 181 75-269 39-219 (605)
361 2v9t_B SLIT homolog 2 protein 99.8 7E-20 2.4E-24 185.2 12.0 151 365-518 15-165 (220)
362 2v70_A SLIT-2, SLIT homolog 2 99.8 6.8E-20 2.3E-24 185.3 11.8 152 389-543 15-167 (220)
363 2xot_A Amphoterin-induced prot 99.8 5.4E-20 1.9E-24 201.2 10.6 157 386-542 40-202 (361)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 1.4E-19 4.9E-24 182.9 12.3 134 80-213 33-167 (220)
365 2v9t_B SLIT homolog 2 protein 99.8 2.1E-19 7.1E-24 181.7 13.2 134 79-212 32-165 (220)
366 2xot_A Amphoterin-induced prot 99.8 9.9E-20 3.4E-24 199.1 11.0 133 80-212 40-176 (361)
367 3e6j_A Variable lymphocyte rec 99.8 4E-19 1.4E-23 180.9 14.2 134 409-543 40-173 (229)
368 4b8c_D Glucose-repressible alc 99.8 4.5E-20 1.5E-24 219.5 5.3 218 79-308 173-404 (727)
369 1xeu_A Internalin C; cellular 99.8 1.2E-19 4E-24 188.9 7.2 171 77-262 17-187 (263)
370 1dce_A Protein (RAB geranylger 99.8 2.9E-21 1E-25 222.6 -5.4 120 387-511 443-566 (567)
371 4ezg_A Putative uncharacterize 99.8 3E-19 1E-23 177.3 9.2 154 100-261 41-195 (197)
372 4ezg_A Putative uncharacterize 99.8 7.4E-19 2.5E-23 174.5 10.6 155 123-285 40-195 (197)
373 1xeu_A Internalin C; cellular 99.8 3.7E-19 1.3E-23 185.1 8.2 171 101-286 17-187 (263)
374 1zth_A RIO1 serine protein kin 99.7 1.7E-18 5.7E-23 179.6 9.6 141 600-755 48-219 (258)
375 1w8a_A SLIT protein; signaling 99.7 9.6E-18 3.3E-22 165.6 11.9 110 80-189 30-140 (192)
376 1w8a_A SLIT protein; signaling 99.7 1.7E-17 5.8E-22 163.8 10.8 131 82-215 11-142 (192)
377 2ell_A Acidic leucine-rich nuc 99.7 1.8E-17 6.1E-22 160.0 10.5 133 78-212 23-160 (168)
378 3sb4_A Hypothetical leucine ri 99.7 7E-18 2.4E-22 182.0 7.2 103 336-440 225-328 (329)
379 3sb4_A Hypothetical leucine ri 99.7 2.8E-18 9.7E-23 185.1 2.7 262 246-536 24-328 (329)
380 2ell_A Acidic leucine-rich nuc 99.7 4.2E-17 1.4E-21 157.4 10.1 133 102-236 23-160 (168)
381 2je0_A Acidic leucine-rich nuc 99.7 2.5E-17 8.7E-22 155.4 7.0 128 78-207 16-148 (149)
382 2je0_A Acidic leucine-rich nuc 99.7 1.2E-16 4E-21 150.8 9.9 129 408-538 16-149 (149)
383 2o6r_A Variable lymphocyte rec 99.7 4.7E-16 1.6E-20 151.3 13.0 134 42-191 7-140 (177)
384 2wfh_A SLIT homolog 2 protein 99.6 6E-16 2E-20 152.6 12.8 109 103-212 31-139 (193)
385 4gyi_A RIO2 kinase; protein ki 99.6 8.5E-17 2.9E-21 172.6 7.2 143 599-755 95-265 (397)
386 2wfh_A SLIT homolog 2 protein 99.6 3.8E-16 1.3E-20 154.0 10.7 128 388-519 13-140 (193)
387 2o6r_A Variable lymphocyte rec 99.6 9.9E-16 3.4E-20 149.0 12.8 130 82-214 10-139 (177)
388 1ds9_A Outer arm dynein; leuci 99.6 4E-18 1.4E-22 169.4 -5.6 137 76-217 15-158 (198)
389 1ds9_A Outer arm dynein; leuci 99.6 1.1E-17 3.9E-22 166.0 -5.7 135 99-238 14-155 (198)
390 4fdw_A Leucine rich hypothetic 99.6 9.3E-15 3.2E-19 160.9 14.6 201 331-539 174-380 (401)
391 1a9n_A U2A', U2A'; complex (nu 99.6 2E-15 6.7E-20 146.8 6.7 131 75-211 15-152 (176)
392 1a9n_A U2A', U2A'; complex (nu 99.6 3.4E-15 1.2E-19 145.0 8.1 132 405-542 15-153 (176)
393 4fdw_A Leucine rich hypothetic 99.6 2.5E-14 8.6E-19 157.5 15.0 89 426-517 293-382 (401)
394 4fs7_A Uncharacterized protein 99.5 2.9E-13 9.9E-18 149.6 20.0 330 72-462 64-393 (394)
395 4fs7_A Uncharacterized protein 99.5 2.8E-13 9.5E-18 149.7 19.0 330 144-534 64-393 (394)
396 3g39_A Variable lymphocyte rec 99.5 1.5E-13 5.2E-18 132.3 11.9 103 84-189 14-116 (170)
397 2r9u_A Variable lymphocyte rec 99.5 1.2E-13 4.1E-18 133.5 11.0 103 83-188 16-118 (174)
398 3g39_A Variable lymphocyte rec 99.5 1.1E-13 3.7E-18 133.3 10.0 105 412-519 12-116 (170)
399 2r9u_A Variable lymphocyte rec 99.4 1.6E-13 5.4E-18 132.6 9.5 104 106-212 15-118 (174)
400 2ifg_A High affinity nerve gro 99.4 1.3E-12 4.3E-17 141.9 10.9 92 95-188 24-116 (347)
401 3un9_A NLR family member X1; l 99.3 1.9E-14 6.4E-19 156.9 -7.3 182 103-284 72-283 (372)
402 3un9_A NLR family member X1; l 99.3 5E-14 1.7E-18 153.5 -4.2 165 361-525 72-259 (372)
403 4gt6_A Cell surface protein; l 99.3 9.9E-11 3.4E-15 129.2 20.8 132 378-516 258-389 (394)
404 2ifg_A High affinity nerve gro 99.2 1.9E-11 6.6E-16 132.5 11.7 130 366-498 13-145 (347)
405 3tm0_A Aminoglycoside 3'-phosp 99.2 2.5E-11 8.4E-16 126.0 11.3 145 597-754 12-213 (263)
406 4gt6_A Cell surface protein; l 99.2 3.6E-10 1.2E-14 124.7 19.2 138 326-470 254-391 (394)
407 3rw6_A Nuclear RNA export fact 99.1 6E-13 2.1E-17 136.1 -8.3 149 40-192 76-237 (267)
408 1nd4_A Aminoglycoside 3'-phosp 99.1 1.3E-10 4.5E-15 120.3 8.5 138 599-754 20-214 (264)
409 3dxp_A Putative acyl-COA dehyd 99.0 1E-09 3.5E-14 119.4 11.6 143 603-754 42-248 (359)
410 2ra8_A Uncharacterized protein 99.0 5.6E-11 1.9E-15 128.2 1.0 62 119-183 164-227 (362)
411 4h09_A Hypothetical leucine ri 99.0 1.3E-08 4.4E-13 111.5 18.4 146 379-529 211-356 (379)
412 2ra8_A Uncharacterized protein 99.0 1.4E-10 4.8E-15 125.2 2.2 161 122-285 134-321 (362)
413 4h09_A Hypothetical leucine ri 98.9 2.4E-08 8.2E-13 109.4 19.7 60 121-183 40-99 (379)
414 3sg8_A APH(2'')-ID; antibiotic 98.9 1.9E-09 6.4E-14 114.3 7.6 182 604-806 25-288 (304)
415 3r70_A Aminoglycoside phosphot 98.7 7.1E-08 2.4E-12 102.9 12.1 185 600-803 38-296 (320)
416 3rw6_A Nuclear RNA export fact 98.6 4.7E-09 1.6E-13 107.2 1.1 113 67-181 129-257 (267)
417 1io0_A Tropomodulin; LRR prote 98.5 1.7E-08 6E-13 98.1 0.0 89 454-542 62-164 (185)
418 1io0_A Tropomodulin; LRR prote 98.4 1.6E-08 5.4E-13 98.4 -1.3 90 381-470 32-136 (185)
419 3tdw_A Gentamicin resistance p 98.4 2.1E-06 7E-11 90.7 12.4 137 604-755 24-225 (306)
420 3d1u_A Putative fructosamine-3 98.3 1.4E-06 4.7E-11 91.0 9.8 77 602-686 18-97 (288)
421 4gkh_A Aminoglycoside 3'-phosp 98.3 4.4E-06 1.5E-10 86.5 11.9 135 606-754 31-223 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 6.5E-06 2.2E-10 88.9 11.6 145 601-755 43-244 (362)
423 3ats_A Putative uncharacterize 98.1 2.8E-06 9.7E-11 91.9 7.0 83 604-687 25-121 (357)
424 2olc_A MTR kinase, methylthior 97.9 2.8E-05 9.7E-10 85.3 10.5 79 604-684 35-120 (397)
425 3jr1_A Putative fructosamine-3 97.8 9.3E-05 3.2E-09 77.7 12.4 139 603-750 40-232 (312)
426 2q83_A YTAA protein; 2635576, 97.8 8.2E-05 2.8E-09 79.7 12.3 141 605-754 38-252 (346)
427 3e4g_A ATP synthase subunit S, 97.8 3.6E-06 1.2E-10 79.5 1.2 87 433-519 61-154 (176)
428 3e4g_A ATP synthase subunit S, 97.7 6.9E-06 2.4E-10 77.6 0.5 84 385-468 61-150 (176)
429 3f7w_A Putative fructosamine-3 97.6 9.4E-05 3.2E-09 77.1 8.2 78 600-685 16-96 (288)
430 2pyw_A Uncharacterized protein 97.6 0.0003 1E-08 77.7 12.0 77 724-802 232-313 (420)
431 1pgv_A TMD-1, tropomodulin TMD 97.5 1.9E-05 6.4E-10 76.1 0.3 63 384-446 40-111 (197)
432 1pgv_A TMD-1, tropomodulin TMD 97.4 3.8E-05 1.3E-09 74.0 1.3 85 457-541 70-169 (197)
433 3dxq_A Choline/ethanolamine ki 97.3 0.00048 1.6E-08 72.2 8.5 139 604-755 23-203 (301)
434 3csv_A Aminoglycoside phosphot 97.2 0.0008 2.7E-08 71.6 8.9 142 605-755 24-218 (333)
435 1nw1_A Choline kinase (49.2 KD 97.1 0.00068 2.3E-08 74.8 8.3 72 604-685 78-158 (429)
436 2ppq_A HSK, HK, homoserine kin 97.1 0.002 6.9E-08 68.1 11.1 157 591-754 9-217 (322)
437 3feg_A Choline/ethanolamine ki 97.1 0.0011 3.8E-08 71.4 9.0 142 604-754 55-254 (379)
438 1zyl_A Hypothetical protein YI 97.0 0.0029 1E-07 67.0 11.9 143 605-755 32-224 (328)
439 3i1a_A Spectinomycin phosphotr 96.8 0.0028 9.7E-08 67.5 9.5 32 724-755 206-237 (339)
440 2qg7_A Ethanolamine kinase PV0 96.8 0.0023 8E-08 70.8 9.1 74 604-686 113-188 (458)
441 3rfe_A Platelet glycoprotein I 96.7 0.0014 4.8E-08 58.9 5.1 56 485-542 12-68 (130)
442 3rfe_A Platelet glycoprotein I 96.7 0.0025 8.5E-08 57.2 6.4 54 85-140 14-68 (130)
443 3c5i_A Choline kinase; choline 96.6 0.0024 8.3E-08 69.0 6.9 73 604-685 38-120 (369)
444 3f2s_A CK, chetk-alpha, cholin 96.5 0.0066 2.3E-07 65.6 9.3 146 605-754 58-280 (401)
445 3mes_A Choline kinase; malaria 95.4 0.028 9.5E-07 61.3 8.3 141 604-754 75-291 (424)
446 3g15_A CK, chetk-alpha, cholin 93.2 0.23 7.8E-06 53.9 9.3 30 725-754 245-280 (401)
447 2yle_A Protein spire homolog 1 91.7 0.31 1.1E-05 47.0 6.8 102 685-804 34-135 (229)
448 4ann_A ESSB; membrane protein, 89.2 0.97 3.3E-05 43.6 7.9 116 657-807 43-159 (215)
449 4ano_A ESSB; membrane protein, 83.0 2.8 9.7E-05 40.5 7.5 115 657-807 48-164 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 65.7 0.73 2.5E-05 50.8 -2.0 62 603-669 146-214 (463)
451 2lz0_A Uncharacterized protein 41.7 47 0.0016 27.4 5.8 49 322-371 5-53 (100)
452 3ls8_A Phosphatidylinositol 3- 39.8 1.9E+02 0.0066 32.4 12.1 84 662-753 402-501 (614)
453 2lz0_A Uncharacterized protein 30.3 62 0.0021 26.6 4.8 38 426-464 13-50 (100)
454 1cja_A Protein (actin-fragmin 30.2 1.6E+02 0.0056 30.1 8.6 140 601-754 71-237 (342)
455 3ox7_P MH027; urokinase-type p 24.2 19 0.00065 19.7 0.3 9 40-48 6-14 (23)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.1e-77 Score=721.55 Aligned_cols=548 Identities=33% Similarity=0.493 Sum_probs=408.8
Q ss_pred hHHHHHHHHHHHhccCCCCCCcccCCCCCCCCCCCCCCCCccCceEEcCCCCceEEEeccccCcccc---ccC-------
Q 038003 3 NEEAYALLKWKTSLQNQNLNSSLLSSWTLYPANATKISPCSWFGISCNHAGSRVISITMSTLGLNGT---FHD------- 72 (848)
Q Consensus 3 ~~~~~all~~k~~~~~~~~~~~~l~sw~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~---~~~------- 72 (848)
++|++|||+||+++.++ . .++||+ .+.|||.|.||+|+ ++||++|+|++.++.|. +++
T Consensus 11 ~~~~~all~~k~~~~~~---~-~l~~W~------~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~ 78 (768)
T 3rgz_A 11 YREIHQLISFKDVLPDK---N-LLPDWS------SNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTG 78 (768)
T ss_dssp HHHHHHHHHHHTTCSCT---T-SSTTCC------TTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTT
T ss_pred HHHHHHHHHHHhhCCCc---c-cccCCC------CCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCc
Confidence 68999999999999743 3 799996 36799999999998 68999999999999987 443
Q ss_pred ---------------CccCCCCCCcEEeccCCcccccccc--cccCCCCCcEEEccccCCCCCCchhh-hccccccEEEe
Q 038003 73 ---------------FSFSSFPHLANLNLSFNLFFGNIPL--QIGNLSKLQYLDLGSNQLSGLIPPEI-GKLNQLRRLYL 134 (848)
Q Consensus 73 ---------------~~~~~l~~l~~L~l~~n~~~~~~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~~L~~L~L 134 (848)
..+..+++|++|||++|.++|.+|. .++++++|++|||++|.+++.+|..+ +++++|++|+|
T Consensus 79 L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L 158 (768)
T 3rgz_A 79 LESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDL 158 (768)
T ss_dssp CCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEEC
T ss_pred ccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEEC
Confidence 4688899999999999999999998 89999999999988888887777654 44444444444
Q ss_pred cccCcCCCCCcc-------------------------ccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccC
Q 038003 135 DMNQLHGTIPPE-------------------------IGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSG 189 (848)
Q Consensus 135 ~~n~l~~~~p~~-------------------------~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 189 (848)
++|++++..|.. ++.+++|++|+|++|++++.+|. ++++++|++|++++|++++
T Consensus 159 s~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~ 237 (768)
T 3rgz_A 159 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSG 237 (768)
T ss_dssp CSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCS
T ss_pred CCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCC
Confidence 444444332221 13344455555555555544444 5555555555555555554
Q ss_pred CCcccccccccc----------------------cccccccccccccCcccccCC-cccceeeccccCCCCCCCCcccCc
Q 038003 190 SIPSIIGKLKSL----------------------LQLDLSENQFSGSIPLSLGNL-SSLTMMSLFNNSLSGSIPPILGNL 246 (848)
Q Consensus 190 ~~p~~~~~l~~L----------------------~~L~L~~N~l~~~~p~~l~~l-~~L~~L~l~~n~l~~~~p~~l~~l 246 (848)
.+|..++.+++| ++|+|++|++++.+|..+..+ ++|++|++++|++++.+|..++.+
T Consensus 238 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l 317 (768)
T 3rgz_A 238 DFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 317 (768)
T ss_dssp CHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGC
T ss_pred cccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcC
Confidence 444444444444 444444444444566666554 777777777777777777777777
Q ss_pred ccccccccccccccCcCCCc-ccCCCCCceEEccCccccccCcccccCCC-CCcccccccccc-----------------
Q 038003 247 KSLSALGLHINQLNGFIPPS-IGNLSSLRVLYLYNNGLYGFVPEEIGYLK-SLSELELCTNLL----------------- 307 (848)
Q Consensus 247 ~~L~~L~l~~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l----------------- 307 (848)
++|++|++++|++.+.+|.. +.++++|++|++++|.+++.+|..+..++ +|+.|++++|.+
T Consensus 318 ~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~ 397 (768)
T 3rgz_A 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397 (768)
T ss_dssp TTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCC
T ss_pred CCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCcc
Confidence 77777777777777666654 67777777777777777766666665554 555555555554
Q ss_pred ---------ccccCC------ccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeeccccc
Q 038003 308 ---------RGVIPH------SIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNN 372 (848)
Q Consensus 308 ---------~~~~p~------~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 372 (848)
++.+|. .++.|.+.+|++++..+..++.+++|++|++++|++++..|..+..+++|+.|++++|+
T Consensus 398 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 477 (768)
T 3rgz_A 398 ELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 477 (768)
T ss_dssp EEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCc
Confidence 444442 24455666666666666666666777777777777777777777777777777777777
Q ss_pred ccCCCCCCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCc
Q 038003 373 ISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKS 452 (848)
Q Consensus 373 i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 452 (848)
+++.+|..++.+++|++|+|++|++++.+|.++..+++|++|+|++|++++.+|..++.+++|++|++++|+++|.+|..
T Consensus 478 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~ 557 (768)
T 3rgz_A 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGG
T ss_pred ccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChH
Confidence 77777777777888888888888888888888888888888888888888888888888888888888888887666643
Q ss_pred c----------------------------------------------------------------------cCcccccee
Q 038003 453 I----------------------------------------------------------------------GNLLKLHYL 462 (848)
Q Consensus 453 ~----------------------------------------------------------------------~~l~~L~~L 462 (848)
+ +.+++|++|
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~L 637 (768)
T 3rgz_A 558 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637 (768)
T ss_dssp GGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEE
T ss_pred HhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEE
Confidence 3 335678899
Q ss_pred ccccCcCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccC
Q 038003 463 NLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELH 542 (848)
Q Consensus 463 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~ 542 (848)
+|++|+++|.+|..|+.+++|+.|+|++|+++|.+|..++++++|+.|||++|+++|.+|..+..+++|+.||+++|+++
T Consensus 638 dLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 638 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp ECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred ECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcc---cccccccccCcc
Q 038003 543 GPIPNSTAF---KDGLMEGNKGLK 563 (848)
Q Consensus 543 ~~~~~~~~~---~~~~~~~~~~l~ 563 (848)
|++|...+| ....|.||++++
T Consensus 718 g~iP~~~~~~~~~~~~~~gN~~Lc 741 (768)
T 3rgz_A 718 GPIPEMGQFETFPPAKFLNNPGLC 741 (768)
T ss_dssp EECCSSSSGGGSCGGGGCSCTEEE
T ss_pred ccCCCchhhccCCHHHhcCCchhc
Confidence 999988765 445788998764
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.8e-62 Score=592.52 Aligned_cols=483 Identities=35% Similarity=0.499 Sum_probs=439.6
Q ss_pred ceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEe
Q 038003 55 RVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYL 134 (848)
Q Consensus 55 ~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 134 (848)
+.+.|+++++.+.|..+ +..+++|++|+|++|.+++.+|. ++++++|++|+|++|++++.+|..++++++|++|+|
T Consensus 179 ~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L 254 (768)
T 3rgz_A 179 ELKHLAISGNKISGDVD---VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI 254 (768)
T ss_dssp TCCEEECCSSEEESCCB---CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEEC
T ss_pred CCCEEECCCCcccccCC---cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEEC
Confidence 45566666666666543 47888999999999999888887 999999999999999999989999999999999999
Q ss_pred cccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCc-cccceEEeecccccCCCcccccccccccccccccccccc
Q 038003 135 DMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNL-SNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSG 213 (848)
Q Consensus 135 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l-~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 213 (848)
++|++++.+|.. .+++|++|+|++|++++.+|..+..+ ++|++|++++|++++.+|..|+.+++|++|+|++|+++|
T Consensus 255 s~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 332 (768)
T 3rgz_A 255 SSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSG 332 (768)
T ss_dssp CSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred CCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccC
Confidence 999999888775 88999999999999999999988775 999999999999999999999999999999999999998
Q ss_pred cCccc-ccCCcccceeeccccCCCCCCCCcccCcc-cccccccccccccCcCCCcccC--CCCCceEEccCccccccCcc
Q 038003 214 SIPLS-LGNLSSLTMMSLFNNSLSGSIPPILGNLK-SLSALGLHINQLNGFIPPSIGN--LSSLRVLYLYNNGLYGFVPE 289 (848)
Q Consensus 214 ~~p~~-l~~l~~L~~L~l~~n~l~~~~p~~l~~l~-~L~~L~l~~N~l~~~~p~~l~~--l~~L~~L~Ls~N~l~~~~p~ 289 (848)
.+|.. +..+++|++|++++|++++.+|..+..++ +|++|++++|++++.+|..+.. +++|++|++++|.+++.+|.
T Consensus 333 ~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~ 412 (768)
T 3rgz_A 333 ELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPP 412 (768)
T ss_dssp ECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCG
T ss_pred cCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCH
Confidence 88876 89999999999999999999999999887 9999999999999988888877 88999999999999999999
Q ss_pred cccCCCCCccccccccccccccCC------ccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccc
Q 038003 290 EIGYLKSLSELELCTNLLRGVIPH------SIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKL 363 (848)
Q Consensus 290 ~~~~l~~L~~L~L~~N~l~~~~p~------~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 363 (848)
.+..+++|+.|++++|.+++.+|. .++.+.+.+|.+++..+..+..+++|++|++++|++++..|..+..+++|
T Consensus 413 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 492 (768)
T 3rgz_A 413 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNL 492 (768)
T ss_dssp GGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTC
T ss_pred HHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCC
Confidence 999999999999999999988875 47789999999999999999999999999999999999999999999999
Q ss_pred cEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcc---------------
Q 038003 364 STFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLE--------------- 428 (848)
Q Consensus 364 ~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~--------------- 428 (848)
+.|++++|++++.+|.+++.+++|++|+|++|++++.+|..+..+++|+.|++++|.++|.+|..
T Consensus 493 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~ 572 (768)
T 3rgz_A 493 NWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAG 572 (768)
T ss_dssp CEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCS
T ss_pred CEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999998777654
Q ss_pred -------------------------------------------------------cCCCCccCeEeccCcccCCCCCCcc
Q 038003 429 -------------------------------------------------------FGSLTKLQYLDLSTNKLSSSIPKSI 453 (848)
Q Consensus 429 -------------------------------------------------------~~~l~~L~~L~Ls~N~l~~~~p~~~ 453 (848)
++.+++|++|||++|+++|.+|..|
T Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l 652 (768)
T 3rgz_A 573 KRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEI 652 (768)
T ss_dssp CEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGG
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHH
Confidence 3446789999999999999999999
Q ss_pred cCccccceeccccCcCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCcee
Q 038003 454 GNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSC 533 (848)
Q Consensus 454 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 533 (848)
+++++|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..+..+++|++|++++|+++|.+|.. ..+..+..
T Consensus 653 ~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~ 731 (768)
T 3rgz_A 653 GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPP 731 (768)
T ss_dssp GGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCG
T ss_pred hccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999864 45566667
Q ss_pred ecCCCCc-cCCC
Q 038003 534 IDISYNE-LHGP 544 (848)
Q Consensus 534 l~ls~N~-l~~~ 544 (848)
..+.+|+ ++|.
T Consensus 732 ~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 732 AKFLNNPGLCGY 743 (768)
T ss_dssp GGGCSCTEEEST
T ss_pred HHhcCCchhcCC
Confidence 7788885 7774
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.5e-61 Score=566.46 Aligned_cols=486 Identities=20% Similarity=0.254 Sum_probs=327.1
Q ss_pred HHHHHHHHHHHhccCCCCC-----CcccCCCCCCCCCCCCCCCCcc---CceEEcCCCCceEEEeccccCccccccCCcc
Q 038003 4 EEAYALLKWKTSLQNQNLN-----SSLLSSWTLYPANATKISPCSW---FGISCNHAGSRVISITMSTLGLNGTFHDFSF 75 (848)
Q Consensus 4 ~~~~all~~k~~~~~~~~~-----~~~l~sw~~~~~~~~~~~~c~w---~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~ 75 (848)
.|++||.+||+++..+... ....++|+ .+.|||.| .||+|+.. +||++|+|+++++.|++|+ ++
T Consensus 30 ~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~------~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~-~l 101 (636)
T 4eco_A 30 KDYLALKEIWDALNGKNWSQQGFGTQPGANWN------FNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPD-AI 101 (636)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCC------CCCC------CSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECG-GG
T ss_pred HHHHHHHHHHHHcCCCCcccCCcCCccCCCCC------CCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCCh-HH
Confidence 6999999999999665321 11234776 36899999 99999865 8999999999999999985 79
Q ss_pred CCCCCCcEEeccCCcc------cc------cccccccCCCCCcEEEccccCCCCCCchhhhc-cccccEEEec-------
Q 038003 76 SSFPHLANLNLSFNLF------FG------NIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGK-LNQLRRLYLD------- 135 (848)
Q Consensus 76 ~~l~~l~~L~l~~n~~------~~------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~-l~~L~~L~L~------- 135 (848)
+.|++|++|+|++|.+ .| .+|... +..|+ +++++|.+.+.+|..+.. +.++..+++.
T Consensus 102 ~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 178 (636)
T 4eco_A 102 GQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKS 178 (636)
T ss_dssp GGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCC
T ss_pred hcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccc
Confidence 9999999999999987 44 566555 67777 888888888888877763 2233333333
Q ss_pred -------------ccCcCCCCCccccCcCCccEEEcCCCcCCCC-----------------CCCccc--CccccceEEee
Q 038003 136 -------------MNQLHGTIPPEIGQLSLIDKLALCHNNLHGS-----------------IPSSLG--NLSNLAVLYLY 183 (848)
Q Consensus 136 -------------~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-----------------~p~~l~--~l~~L~~L~l~ 183 (848)
.|+++| +|.+++++++|++|+|++|+++|. +|+.++ ++++|++|+|+
T Consensus 179 ~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~ 257 (636)
T 4eco_A 179 SRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVY 257 (636)
T ss_dssp CCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred cccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEec
Confidence 567776 777777777788888887777765 777777 77778888887
Q ss_pred cccccCCCccccccccccccccccccc-ccc-cCcccccCC------cccceeeccccCCCCCCCC--cccCcccccccc
Q 038003 184 KNSLSGSIPSIIGKLKSLLQLDLSENQ-FSG-SIPLSLGNL------SSLTMMSLFNNSLSGSIPP--ILGNLKSLSALG 253 (848)
Q Consensus 184 ~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l------~~L~~L~l~~n~l~~~~p~--~l~~l~~L~~L~ 253 (848)
+|++.+.+|..|+++++|++|+|++|+ ++| .+|..++.+ ++|++|++++|+++ .+|. .++.+++|++|+
T Consensus 258 ~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~ 336 (636)
T 4eco_A 258 NCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLE 336 (636)
T ss_dssp CCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEE
T ss_pred CCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEe
Confidence 777777777777777777778887777 777 777777665 77777777777777 6777 777777777777
Q ss_pred cccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCC-CccccccccccccccCCccceeeccccCCCCccccc
Q 038003 254 LHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKS-LSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEA 332 (848)
Q Consensus 254 l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~ 332 (848)
+++|+++|.+| .+..+++|++|++++|.++ .+|..+..+++ |++|++++|.++ .+|..+.
T Consensus 337 L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~---------------- 397 (636)
T 4eco_A 337 CLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFD---------------- 397 (636)
T ss_dssp CCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCC----------------
T ss_pred CcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhh----------------
Confidence 77777777777 6777777777777777777 56666776666 777777666666 3443211
Q ss_pred cCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCccccccccccc
Q 038003 333 FGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLN 412 (848)
Q Consensus 333 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 412 (848)
...+++|++|++++|++++..|..+... ......+++|++|+|++|++++..+..+..+++|+
T Consensus 398 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~~-----------------~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~ 460 (636)
T 4eco_A 398 AKSVSVMSAIDFSYNEIGSVDGKNFDPL-----------------DPTPFKGINVSSINLSNNQISKFPKELFSTGSPLS 460 (636)
T ss_dssp TTCSSCEEEEECCSSCTTTTTTCSSCTT-----------------CSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCS
T ss_pred hcccCccCEEECcCCcCCCcchhhhccc-----------------ccccccCCCCCEEECcCCccCcCCHHHHccCCCCC
Confidence 0112356666666666655544444300 00000445566666666666533333344455666
Q ss_pred EEEccCCcCCCCCCcccCCC-------CccCeEeccCcccCCCCCCccc--CccccceeccccCcCCCCChhHHhhhccc
Q 038003 413 KLILNLNQLSGGVPLEFGSL-------TKLQYLDLSTNKLSSSIPKSIG--NLLKLHYLNLSNNQLSHKIPTEFEKLIHL 483 (848)
Q Consensus 413 ~L~L~~N~l~~~~~~~~~~l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 483 (848)
+|+|++|+++...+..+... ++|++|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|
T Consensus 461 ~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L 538 (636)
T 4eco_A 461 SINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTL 538 (636)
T ss_dssp EEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSC
T ss_pred EEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCC
Confidence 66666666652222222222 25666666666666 4555554 56666666666666665 55566666666
Q ss_pred ceecc------cCcccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccCC
Q 038003 484 SELDL------SHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHG 543 (848)
Q Consensus 484 ~~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~ 543 (848)
+.|+| ++|++.+.+|..+..+++|++|+|++|++ +.+|..+. ++|+.|++++|++..
T Consensus 539 ~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 539 KGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred CEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 66666 45667777777777777777777777777 44565554 677777777777653
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.7e-59 Score=558.87 Aligned_cols=486 Identities=17% Similarity=0.241 Sum_probs=326.9
Q ss_pred hHHHHHHHHHHHhccCCCCCCcccCCCCCCCCCCCCCCC--Ccc------------CceEEcCCCCceEEEeccccCccc
Q 038003 3 NEEAYALLKWKTSLQNQNLNSSLLSSWTLYPANATKISP--CSW------------FGISCNHAGSRVISITMSTLGLNG 68 (848)
Q Consensus 3 ~~~~~all~~k~~~~~~~~~~~~l~sw~~~~~~~~~~~~--c~w------------~gv~C~~~~~~v~~l~l~~~~l~g 68 (848)
.+|++||++||+++.++ +|+... +|...+| |.| .||+|+. ++||++|+|+++++.|
T Consensus 268 ~~d~~ALl~~k~~l~~~--------~W~~~~-~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G 337 (876)
T 4ecn_A 268 IKDYKALKAIWEALDGK--------NWRYYS-GTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKG 337 (876)
T ss_dssp HHHHHHHHHHHHHTTGG--------GCCCCC-SSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEE
T ss_pred hHHHHHHHHHHHHcCCC--------CCCcCC-CcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCC
Confidence 47999999999999442 897422 1223466 999 9999986 6899999999999999
Q ss_pred cccCCccCCCCCCcEEec-cCCccccccccccc-----------------------------------------------
Q 038003 69 TFHDFSFSSFPHLANLNL-SFNLFFGNIPLQIG----------------------------------------------- 100 (848)
Q Consensus 69 ~~~~~~~~~l~~l~~L~l-~~n~~~~~~p~~~~----------------------------------------------- 100 (848)
.+|+ ++++|++|+.|+| ++|.++|..|-...
T Consensus 338 ~ip~-~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 338 RVPD-AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EECG-GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred cCch-HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 9985 7999999999999 89999887543211
Q ss_pred ----CCCCCcEEEccc--cCCCCCCchhhhccccccEEEecccCcCC-----------------CCCcccc--CcCCccE
Q 038003 101 ----NLSKLQYLDLGS--NQLSGLIPPEIGKLNQLRRLYLDMNQLHG-----------------TIPPEIG--QLSLIDK 155 (848)
Q Consensus 101 ----~l~~L~~L~Ls~--n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~~ 155 (848)
....++.+.++. |++++ +|+.|+++++|++|+|++|+++| .+|..++ .+++|++
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred cccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 112233334433 77777 78888888888888888888887 2777766 7777777
Q ss_pred EEcCCCcCCCCCCCcccCccccceEEeeccc-ccC-CCcccccccc-------cccccccccccccccCcc--cccCCcc
Q 038003 156 LALCHNNLHGSIPSSLGNLSNLAVLYLYKNS-LSG-SIPSIIGKLK-------SLLQLDLSENQFSGSIPL--SLGNLSS 224 (848)
Q Consensus 156 L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~l~~l~~ 224 (848)
|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..++.++ +|++|+|++|+++ .+|. .++++++
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~ 574 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVK 574 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTT
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCC
Confidence 7777777777777777777777777777776 776 6776666655 7777777777777 6776 7777777
Q ss_pred cceeeccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCC-CceEEccCccccccCcccccCCCC--Ccccc
Q 038003 225 LTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSS-LRVLYLYNNGLYGFVPEEIGYLKS--LSELE 301 (848)
Q Consensus 225 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~ 301 (848)
|+.|+|++|+++ .+| .++.+++|+.|+|++|+++ .+|..+.++++ |++|+|++|.++ .+|..+..++. |+.|+
T Consensus 575 L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~ 650 (876)
T 4ecn_A 575 LGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVD 650 (876)
T ss_dssp CCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEE
T ss_pred CCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEE
Confidence 777777777777 666 6777777777777777777 56666777777 777777777776 56666665543 77777
Q ss_pred ccccccccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCC
Q 038003 302 LCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDI 381 (848)
Q Consensus 302 L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l 381 (848)
+++|++.+.+|.....+ ..-.+++|+.|+|++|+++......+..+++|+.|++++|+|+ .+|..+
T Consensus 651 Ls~N~l~g~ip~l~~~l-------------~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~ 716 (876)
T 4ecn_A 651 FSYNKIGSEGRNISCSM-------------DDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENS 716 (876)
T ss_dssp CCSSCTTTTSSSCSSCT-------------TTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTS
T ss_pred CcCCcCCCccccchhhh-------------ccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHH
Confidence 77777766554211000 0012346666667666666433333345555666666666555 344333
Q ss_pred CCC--------CCccEEEccCCccCCCCccccc--ccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCC
Q 038003 382 GNS--------PKLQVLDLSSNHIVGKIPVQLE--MLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPK 451 (848)
Q Consensus 382 ~~l--------~~L~~L~Ls~N~l~~~~~~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 451 (848)
... ++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++|+
T Consensus 717 ~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------- 787 (876)
T 4ecn_A 717 LKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------- 787 (876)
T ss_dssp SSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB-------
T ss_pred hccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC-------
Confidence 221 14555555555554 3444443 44555555555555543 34444444555555554433
Q ss_pred cccCccccceeccccCcCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCc
Q 038003 452 SIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSL 531 (848)
Q Consensus 452 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 531 (848)
++++|++.+.+|..|.++++|+.|+|++|+| +.+|..+. ++|+.|+|++|++....+..+.....+
T Consensus 788 -----------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~ 853 (876)
T 4ecn_A 788 -----------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEA 853 (876)
T ss_dssp -----------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHT
T ss_pred -----------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccc
Confidence 3345777777888888888888888888888 56777665 588888888888877666666666666
Q ss_pred eeecCCCCccC
Q 038003 532 SCIDISYNELH 542 (848)
Q Consensus 532 ~~l~ls~N~l~ 542 (848)
..+.+.+|++.
T Consensus 854 ~~~~L~~n~~~ 864 (876)
T 4ecn_A 854 GMYVLLYDKTQ 864 (876)
T ss_dssp TCCEEECCTTS
T ss_pred hheeecCCCcc
Confidence 66677777553
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.8e-57 Score=541.10 Aligned_cols=492 Identities=23% Similarity=0.279 Sum_probs=325.9
Q ss_pred CceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEE
Q 038003 54 SRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLY 133 (848)
Q Consensus 54 ~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 133 (848)
.+++.|+++++.+.+. ++..|.++++|++|+|++|.+++..|.+|+++++|++|+|++|++++..+..|+++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRL-PAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCCC-CGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCCc-CHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 4789999999988874 445689999999999999999999999999999999999999999976666899999999999
Q ss_pred ecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCccccc--ccccccccccccccc
Q 038003 134 LDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIG--KLKSLLQLDLSENQF 211 (848)
Q Consensus 134 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~L~~N~l 211 (848)
|++|++++..|..|+.+++|++|+|++|.+++..|..++++++|++|++++|.+++..+..++ .+++|++|++++|++
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999999987788999999999999999999998899999999999999999999987776654 457899999999988
Q ss_pred cccCcccccCC---------------------------cccceeeccccCCCCCCCCcccCccc--ccccccccccccCc
Q 038003 212 SGSIPLSLGNL---------------------------SSLTMMSLFNNSLSGSIPPILGNLKS--LSALGLHINQLNGF 262 (848)
Q Consensus 212 ~~~~p~~l~~l---------------------------~~L~~L~l~~n~l~~~~p~~l~~l~~--L~~L~l~~N~l~~~ 262 (848)
++..|..+..+ ++|+.|++++|.+++..|..+..++. |+.|++++|++++.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 87777665543 34555666666666666666666544 66666666666666
Q ss_pred CCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccc-----cC----------CccceeeccccCCCC
Q 038003 263 IPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGV-----IP----------HSIERVLLNQNNLSG 327 (848)
Q Consensus 263 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----~p----------~~l~~l~L~~n~l~~ 327 (848)
.|.+|..+++|++|++++|.+.+..|..+..+++|+.|++++|...+. +| ..++.+.+.+|.+++
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 666666666666666666666666555555555555555544433221 11 234444444444444
Q ss_pred ccccccCCCCCccE----------------------------EEccCCccccccCccccCcccccEeecccccccCCCC-
Q 038003 328 KMYEAFGDHPNLTF----------------------------LDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIP- 378 (848)
Q Consensus 328 ~~~~~~~~l~~L~~----------------------------L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p- 378 (848)
+....|..+++|++ |++++|++++..+..+..+++|+.|++++|.+.+.+|
T Consensus 344 ~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 423 (680)
T 1ziw_A 344 IKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTG 423 (680)
T ss_dssp CCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCS
T ss_pred CChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCc
Confidence 44444433333333 3333344444455555666666666666666654443
Q ss_pred CCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCC--CCCCcccCCCCccCeEeccCcccCCCCCCcccCc
Q 038003 379 PDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLS--GGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNL 456 (848)
Q Consensus 379 ~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 456 (848)
..+..+++|++|++++|++++..+..+..+++|+.|++++|.++ +..|..|..+++|++|++++|++++..+..|.++
T Consensus 424 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l 503 (680)
T 1ziw_A 424 QEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGL 503 (680)
T ss_dssp GGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred ccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccc
Confidence 34555666666666666665555555555555555555555554 3455555555555555555555555555555555
Q ss_pred cccceeccccCcCCCCCh--------hHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccCCCcchhccc
Q 038003 457 LKLHYLNLSNNQLSHKIP--------TEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEM 528 (848)
Q Consensus 457 ~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 528 (848)
++|++|+|++|++++..+ ..|.++++|++|+|++|+|+...+..|.++++|++|+|++|+|++..+..|..+
T Consensus 504 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l 583 (680)
T 1ziw_A 504 EKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQ 583 (680)
T ss_dssp TTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred cccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCC
Confidence 555555555555553211 124555555555555555553333345555555555555555555555555555
Q ss_pred cCceeecCCCCccCCCCC
Q 038003 529 RSLSCIDISYNELHGPIP 546 (848)
Q Consensus 529 ~~L~~l~ls~N~l~~~~~ 546 (848)
++|+.|++++|++++..|
T Consensus 584 ~~L~~L~L~~N~l~~~~~ 601 (680)
T 1ziw_A 584 VSLKSLNLQKNLITSVEK 601 (680)
T ss_dssp TTCCEEECTTSCCCBCCH
T ss_pred CCCCEEECCCCcCCccCh
Confidence 555555555555555443
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=9e-57 Score=530.62 Aligned_cols=499 Identities=20% Similarity=0.204 Sum_probs=393.9
Q ss_pred cCceEEcCC---------CCceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccC
Q 038003 44 WFGISCNHA---------GSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQ 114 (848)
Q Consensus 44 w~gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~ 114 (848)
+.-|.|... ...++.|+++++.+++.. +.+|.++++|++|+|++|.+++..|.+|+++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQ-NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEEC-TTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCC-hhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 445778642 135666777777666543 3356777777777777777776667777777777777777777
Q ss_pred CCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCccc
Q 038003 115 LSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSI 194 (848)
Q Consensus 115 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~ 194 (848)
+++..|..|+++++|++|+|++|++++..|..++.+++|++|+|++|++++..+..+..+++|++|++++|.+++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 77666777777777777777777777555666777777777777777777533233344777777777777777666666
Q ss_pred cccccccc--ccccccccccccCcccccCCcccceeeccccCC--------------------------CCCCCCcccCc
Q 038003 195 IGKLKSLL--QLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSL--------------------------SGSIPPILGNL 246 (848)
Q Consensus 195 ~~~l~~L~--~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l--------------------------~~~~p~~l~~l 246 (848)
|+.+++|+ +|++++|++++..|..+.. .+|+.|++++|.. ....+..+..+
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l 251 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchh
Confidence 77777777 6777777777655554433 4566666555430 00011122222
Q ss_pred c--cccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccC------Ccccee
Q 038003 247 K--SLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIP------HSIERV 318 (848)
Q Consensus 247 ~--~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p------~~l~~l 318 (848)
. +|+.|++++|++++..+..|..+++|++|++++|.++ .+|..+..+++|++|++++|.+.+..| ..++.+
T Consensus 252 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 330 (606)
T 3t6q_A 252 CEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHL 330 (606)
T ss_dssp GGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEE
T ss_pred hcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEE
Confidence 2 6888888888888887778888888889999888887 577788888888888888888887655 357788
Q ss_pred eccccCCC-CccccccCCCCCccEEEccCCcccccc--CccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCC
Q 038003 319 LLNQNNLS-GKMYEAFGDHPNLTFLDLSNNNFCGEI--SFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSN 395 (848)
Q Consensus 319 ~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N 395 (848)
.+.+|.+. .++...+..+++|++|++++|.+++.. +..+..+++|+.|++++|.+.+..|..+..+++|++|++++|
T Consensus 331 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 410 (606)
T 3t6q_A 331 SIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFT 410 (606)
T ss_dssp ECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTC
T ss_pred ECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCC
Confidence 88888877 455566889999999999999999876 778999999999999999999999999999999999999999
Q ss_pred ccCCCCcc-cccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCC---CCCcccCccccceeccccCcCCC
Q 038003 396 HIVGKIPV-QLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSS---IPKSIGNLLKLHYLNLSNNQLSH 471 (848)
Q Consensus 396 ~l~~~~~~-~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~ 471 (848)
++++..+. .+..+++|+.|++++|.+++..|..|..+++|++|++++|++++. .+..+..+++|++|+|++|++++
T Consensus 411 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 490 (606)
T 3t6q_A 411 RLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS 490 (606)
T ss_dssp CEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCE
T ss_pred cCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCc
Confidence 99977665 489999999999999999999999999999999999999999862 34678999999999999999999
Q ss_pred CChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccCCCCC
Q 038003 472 KIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIP 546 (848)
Q Consensus 472 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 546 (848)
..|..|..+++|++|+|++|++++..|..+..+++| +|+|++|++++.+|..+..+++|+.+++++|++.+..+
T Consensus 491 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 491 IDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred cChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999987544
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.6e-56 Score=524.61 Aligned_cols=498 Identities=22% Similarity=0.215 Sum_probs=423.0
Q ss_pred CCCCccC----ceEEcCC---------CCceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCC
Q 038003 39 ISPCSWF----GISCNHA---------GSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKL 105 (848)
Q Consensus 39 ~~~c~w~----gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L 105 (848)
.+||.|. .|.|... ..+++.|+++++.+.+.. +..|.++++|++|+|++|.+++..|.+|+++++|
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L 82 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILK-SYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHL 82 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEEC-TTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeC-hhhccCCccCcEEeCCCCcccccCHHHhhchhhc
Confidence 3567663 5777542 246888888888887644 3468889999999999999988888889999999
Q ss_pred cEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCC-CCCCcccCccccceEEeec
Q 038003 106 QYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHG-SIPSSLGNLSNLAVLYLYK 184 (848)
Q Consensus 106 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~l~~ 184 (848)
++|+|++|.+++..|..|+++++|++|+|++|++++..|..++.+++|++|+|++|.+++ .+|..++++++|++|++++
T Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162 (606)
T ss_dssp CEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS
T ss_pred CEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC
Confidence 999999999988888889999999999999999987777889999999999999999886 5788899999999999999
Q ss_pred ccccCCCccccccccccc----ccccccccccccCcccccCCcccceeeccccCCCC-CCCCcccCccccccccc-----
Q 038003 185 NSLSGSIPSIIGKLKSLL----QLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSG-SIPPILGNLKSLSALGL----- 254 (848)
Q Consensus 185 N~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~-~~p~~l~~l~~L~~L~l----- 254 (848)
|++++..|..|+.+++|+ +|++++|.+++..+..+... +|+.|++++|.+++ .+|..+.+++.|+.+++
T Consensus 163 n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~ 241 (606)
T 3vq2_A 163 NYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEF 241 (606)
T ss_dssp SCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECC
T ss_pred CcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhcccccccccccccccc
Confidence 999887788888887776 69999999986555555444 89999999988763 34455555555555444
Q ss_pred ----------------------------ccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccc
Q 038003 255 ----------------------------HINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNL 306 (848)
Q Consensus 255 ----------------------------~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 306 (848)
..|.+.+.+|. +..+++|+.|++++|.+.. +| .+..+++|+.|++++|.
T Consensus 242 ~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~ 318 (606)
T 3vq2_A 242 KDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQ 318 (606)
T ss_dssp TTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCC
T ss_pred ccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEccccc
Confidence 56677777776 8889999999999999974 45 88899999999999999
Q ss_pred cccccC----CccceeeccccCCCCccccccCCCCCccEEEccCCcccccc--CccccCcccccEeecccccccCCCCCC
Q 038003 307 LRGVIP----HSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEI--SFNWGNFSKLSTFIVSMNNISGSIPPD 380 (848)
Q Consensus 307 l~~~~p----~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~l~~N~i~~~~p~~ 380 (848)
+ +.+| ..++.+.+.+|...... .+..+++|++|++++|++++.. +..+..+++|+.|++++|.+.+ +|..
T Consensus 319 l-~~lp~~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~ 394 (606)
T 3vq2_A 319 L-KQFPTLDLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSAN 394 (606)
T ss_dssp C-SSCCCCCCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCC
T ss_pred C-cccccCCCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhh
Confidence 9 5566 35778889888544322 6778999999999999999774 7788899999999999999985 6789
Q ss_pred CCCCCCccEEEccCCccCCCCc-ccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCC-CCCCcccCccc
Q 038003 381 IGNSPKLQVLDLSSNHIVGKIP-VQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSS-SIPKSIGNLLK 458 (848)
Q Consensus 381 l~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~ 458 (848)
+..+++|+.|++++|++.+..+ ..+..+++|++|++++|.+++..|..|..+++|++|++++|++++ .+|..|+.+++
T Consensus 395 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 474 (606)
T 3vq2_A 395 FMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTN 474 (606)
T ss_dssp CTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred ccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCC
Confidence 9999999999999999998877 689999999999999999999999999999999999999999997 47999999999
Q ss_pred cceeccccCcCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccCCCcchhcccc-CceeecCC
Q 038003 459 LHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMR-SLSCIDIS 537 (848)
Q Consensus 459 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~l~ls 537 (848)
|++|+|++|++++..|..|..+++|++|+|++|++++.+|..+..+++|++|+|++|+|+. +|..+..++ +|+.++++
T Consensus 475 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~ 553 (606)
T 3vq2_A 475 LTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLT 553 (606)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECC
T ss_pred CCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEcc
Confidence 9999999999999999999999999999999999999999999999999999999999985 677799997 59999999
Q ss_pred CCccCCCCC
Q 038003 538 YNELHGPIP 546 (848)
Q Consensus 538 ~N~l~~~~~ 546 (848)
+|++.+..+
T Consensus 554 ~N~~~c~c~ 562 (606)
T 3vq2_A 554 NNSVACICE 562 (606)
T ss_dssp SCCCCCSST
T ss_pred CCCcccCCc
Confidence 999987554
No 8
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.3e-54 Score=519.29 Aligned_cols=469 Identities=25% Similarity=0.242 Sum_probs=417.2
Q ss_pred CCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEc
Q 038003 79 PHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158 (848)
Q Consensus 79 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 158 (848)
+++++|+|++|.+++..|..|+++++|++|||++|.+++..|..|+++++|++|+|++|++++..+..|+.+++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 78999999999999888888999999999999999999999999999999999999999999665668999999999999
Q ss_pred CCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCccccc--CCcccceeeccccCCC
Q 038003 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLG--NLSSLTMMSLFNNSLS 236 (848)
Q Consensus 159 ~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~l~~n~l~ 236 (848)
++|++++..|..|+++++|++|++++|.+++..|..++++++|++|+|++|.+++..+..+. .+++|+.|++++|+++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999977778999999999999999999999899999999999999999999988777665 5689999999999999
Q ss_pred CCCCCcccCc---------------------------ccccccccccccccCcCCCcccCCCC--CceEEccCccccccC
Q 038003 237 GSIPPILGNL---------------------------KSLSALGLHINQLNGFIPPSIGNLSS--LRVLYLYNNGLYGFV 287 (848)
Q Consensus 237 ~~~p~~l~~l---------------------------~~L~~L~l~~N~l~~~~p~~l~~l~~--L~~L~Ls~N~l~~~~ 287 (848)
+..|..+..+ ++|+.|++++|++.+..|.++..++. |++|++++|.+++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 8888777654 45778888999999989999988765 999999999999999
Q ss_pred cccccCCCCCccccccccccccccCC------ccceeeccccCCC---------CccccccCCCCCccEEEccCCccccc
Q 038003 288 PEEIGYLKSLSELELCTNLLRGVIPH------SIERVLLNQNNLS---------GKMYEAFGDHPNLTFLDLSNNNFCGE 352 (848)
Q Consensus 288 p~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~l~L~~n~l~---------~~~~~~~~~l~~L~~L~Ls~N~l~~~ 352 (848)
|..|..+++|++|++++|.+.+..|. .++.+.+.+|... .+....|..+++|++|++++|++++.
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~ 344 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI 344 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCC
Confidence 99999999999999999999988775 4677888766433 33334788899999999999999998
Q ss_pred cCccccCcccccEeecc----------------------------cccccCCCCCCCCCCCCccEEEccCCccCCCCc-c
Q 038003 353 ISFNWGNFSKLSTFIVS----------------------------MNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIP-V 403 (848)
Q Consensus 353 ~~~~~~~l~~L~~L~l~----------------------------~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~ 403 (848)
.+..|..+++|+.|+++ +|++++..|..+..+++|++|+|++|++++.+| .
T Consensus 345 ~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 424 (680)
T 1ziw_A 345 KSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 424 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSG
T ss_pred ChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcc
Confidence 88777777666666654 455666678889999999999999999987665 7
Q ss_pred cccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccC--CCCCCcccCccccceeccccCcCCCCChhHHhhhc
Q 038003 404 QLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLS--SSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLI 481 (848)
Q Consensus 404 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 481 (848)
.+..+++|++|++++|++++..+..|..+++|+.|++++|.++ +..|..|+.+++|+.|+|++|++++..+..|.+++
T Consensus 425 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~ 504 (680)
T 1ziw_A 425 EWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLE 504 (680)
T ss_dssp GGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred cccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcccc
Confidence 8999999999999999999999999999999999999999987 57899999999999999999999998888999999
Q ss_pred ccceecccCcccCcCCC--------ccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccCCCCCC
Q 038003 482 HLSELDLSHNILQEEIP--------PQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIPN 547 (848)
Q Consensus 482 ~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~ 547 (848)
+|++|+|++|++++..+ ..+..+++|++|+|++|+++...+..|..+++|+.|++++|++++..+.
T Consensus 505 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 578 (680)
T 1ziw_A 505 KLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPAS 578 (680)
T ss_dssp TCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred ccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHh
Confidence 99999999999986422 2478999999999999999987677899999999999999999965543
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.4e-54 Score=509.97 Aligned_cols=483 Identities=21% Similarity=0.232 Sum_probs=426.8
Q ss_pred EeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccC
Q 038003 59 ITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQ 138 (848)
Q Consensus 59 l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~ 138 (848)
++..+.++. .+|. .+ -+++++|+|++|.+++..|.+|+++++|++|+|++|++++..|.+|+++++|++|+|++|+
T Consensus 17 ~~c~~~~l~-~iP~-~l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 17 YNCENLGLN-EIPG-TL--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp EECTTSCCS-SCCT-TS--CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EECCCCCcc-cCcC-CC--CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 455555554 3332 12 2479999999999999889999999999999999999999999999999999999999999
Q ss_pred cCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCccc
Q 038003 139 LHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLS 218 (848)
Q Consensus 139 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 218 (848)
+++..|..|+.+++|++|+|++|++++..|..++++++|++|++++|++++..+..+..+++|++|+|++|++++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 99999999999999999999999999777888999999999999999999754444555999999999999999888999
Q ss_pred ccCCcccc--eeeccccCCCCCCCCcccCccccccccccccccc--------------------------CcCCCcccCC
Q 038003 219 LGNLSSLT--MMSLFNNSLSGSIPPILGNLKSLSALGLHINQLN--------------------------GFIPPSIGNL 270 (848)
Q Consensus 219 l~~l~~L~--~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~--------------------------~~~p~~l~~l 270 (848)
++.+++|+ .|++++|.+++..|..+.. .+|+.|++++|... ...+..+..+
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l 251 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchh
Confidence 99999999 8999999999776666544 68999999887510 1112223333
Q ss_pred C--CCceEEccCccccccCcccccCCCCCccccccccccccccC-----CccceeeccccCCCCccccccCCCCCccEEE
Q 038003 271 S--SLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIP-----HSIERVLLNQNNLSGKMYEAFGDHPNLTFLD 343 (848)
Q Consensus 271 ~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-----~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~ 343 (848)
. +|+.|++++|.+++..+..|..+++|++|++++|.++...+ ..++.|.+.+|.++...+..+..+++|++|+
T Consensus 252 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 331 (606)
T 3t6q_A 252 CEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLS 331 (606)
T ss_dssp GGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEE
T ss_pred hcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEE
Confidence 2 78999999999999888889999999999999999985432 3578899999999999999999999999999
Q ss_pred ccCCccccccCc-cccCcccccEeecccccccCCC--CCCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCc
Q 038003 344 LSNNNFCGEISF-NWGNFSKLSTFIVSMNNISGSI--PPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQ 420 (848)
Q Consensus 344 Ls~N~l~~~~~~-~~~~l~~L~~L~l~~N~i~~~~--p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~ 420 (848)
+++|.+.+..+. .+..+++|+.|++++|.+.+.. +..+..+++|++|++++|++.+..|..+..+++|+.|++++|+
T Consensus 332 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 411 (606)
T 3t6q_A 332 IKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTR 411 (606)
T ss_dssp CCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCC
T ss_pred CCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCc
Confidence 999999866654 4899999999999999998766 7889999999999999999998899999999999999999999
Q ss_pred CCCCCCcc-cCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCC---ChhHHhhhcccceecccCcccCcC
Q 038003 421 LSGGVPLE-FGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHK---IPTEFEKLIHLSELDLSHNILQEE 496 (848)
Q Consensus 421 l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~ 496 (848)
+++..+.. |..+++|++|++++|.+++..|..|+.+++|++|+|++|++++. .+..+..+++|++|+|++|++++.
T Consensus 412 l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 491 (606)
T 3t6q_A 412 LKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSI 491 (606)
T ss_dssp EECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEE
T ss_pred CCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCcc
Confidence 99776654 89999999999999999999999999999999999999999873 346799999999999999999999
Q ss_pred CCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccCCCCCC
Q 038003 497 IPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIPN 547 (848)
Q Consensus 497 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~ 547 (848)
.|..|..+++|++|+|++|++++..|..|..+++| .|++++|++++.+|.
T Consensus 492 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~ 541 (606)
T 3t6q_A 492 DQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPS 541 (606)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGG
T ss_pred ChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHh
Confidence 99999999999999999999999999999999999 999999999987764
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1e-53 Score=521.45 Aligned_cols=488 Identities=23% Similarity=0.238 Sum_probs=377.1
Q ss_pred CccCceEEcCCCCceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccc-cccccCCCCCcEEEccccCCCCCCc
Q 038003 42 CSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNI-PLQIGNLSKLQYLDLGSNQLSGLIP 120 (848)
Q Consensus 42 c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~p 120 (848)
|.|..|.+ ...+++.|+|+++.+++..+ .+|.++++|++|+|++|.+.+.+ |.+|+++++|++|+|++|.+++..|
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~-~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTA-SSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECS-SSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccCh-hHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 57888887 45689999999998876544 47999999999999999887777 7789999999999999999999999
Q ss_pred hhhhccccccEEEecccCcCCCCCcc--ccCcCCccEEEcCCCcCCCCCC-CcccCccccceEEeecccccCCCcccccc
Q 038003 121 PEIGKLNQLRRLYLDMNQLHGTIPPE--IGQLSLIDKLALCHNNLHGSIP-SSLGNLSNLAVLYLYKNSLSGSIPSIIGK 197 (848)
Q Consensus 121 ~~~~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~l~~N~l~~~~p~~~~~ 197 (848)
..|+++++|++|+|++|.+++.+|.. ++.+++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..++.
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 99999999999999999999877765 9999999999999999997655 57999999999999999999989999988
Q ss_pred c--ccccccccccccccccCcccccCCcc------cceeeccccCCCCCCCCcccCc-----------------------
Q 038003 198 L--KSLLQLDLSENQFSGSIPLSLGNLSS------LTMMSLFNNSLSGSIPPILGNL----------------------- 246 (848)
Q Consensus 198 l--~~L~~L~L~~N~l~~~~p~~l~~l~~------L~~L~l~~n~l~~~~p~~l~~l----------------------- 246 (848)
+ ++|+.|+|++|.+++..|..++.+++ |+.|++++|.+++.+|..+...
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 8 89999999999999999888877766 9999999999988777655432
Q ss_pred ---------------ccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCcccccccccccccc
Q 038003 247 ---------------KSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVI 311 (848)
Q Consensus 247 ---------------~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 311 (848)
++|+.|++++|.+.+..|..|..+++|+.|+|++|.+.+..|..|..+++|++|++++|.+++..
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 330 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELY 330 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCC
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccC
Confidence 46777777777777777777777777777777777777777777777777777777777776665
Q ss_pred CC------ccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCC
Q 038003 312 PH------SIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSP 385 (848)
Q Consensus 312 p~------~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~ 385 (848)
|. .++.+.+++|+++.+....|..+++|++|+|++|.+++. ..+++|+.|++++|+++ .+|.. ..
T Consensus 331 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~ 401 (844)
T 3j0a_A 331 SSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NL 401 (844)
T ss_dssp SCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CT
T ss_pred HHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---cc
Confidence 53 456667777777777766777777777777777776643 22666777777777776 33433 34
Q ss_pred CccEEEccCCccCCCC-cccccccccccEEEccCCcCCCCCCc-ccCCCCccCeEeccCcccC-----CCCCCcccCccc
Q 038003 386 KLQVLDLSSNHIVGKI-PVQLEMLSSLNKLILNLNQLSGGVPL-EFGSLTKLQYLDLSTNKLS-----SSIPKSIGNLLK 458 (848)
Q Consensus 386 ~L~~L~Ls~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~ 458 (848)
+++.|++++|++++.. +..+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|.++++
T Consensus 402 ~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~ 481 (844)
T 3j0a_A 402 TANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSH 481 (844)
T ss_dssp TCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCC
T ss_pred ccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCccc
Confidence 5677777777777432 22345677777777777777754433 3455677777777777776 344556777777
Q ss_pred cceeccccCcCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCC
Q 038003 459 LHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISY 538 (848)
Q Consensus 459 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~ 538 (848)
|+.|+|++|+|++.+|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..| .+|+.+++++
T Consensus 482 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~ 556 (844)
T 3j0a_A 482 LQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITH 556 (844)
T ss_dssp EECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEE
T ss_pred ccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecC
Confidence 77788888877777777777777777888888877766555554 677777888887777777654 3677777777
Q ss_pred CccCCCCC
Q 038003 539 NELHGPIP 546 (848)
Q Consensus 539 N~l~~~~~ 546 (848)
|++.+..+
T Consensus 557 Np~~C~c~ 564 (844)
T 3j0a_A 557 NKFICECE 564 (844)
T ss_dssp ECCCCSSS
T ss_pred CCcccccc
Confidence 77766444
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.1e-53 Score=501.85 Aligned_cols=477 Identities=23% Similarity=0.236 Sum_probs=419.6
Q ss_pred EEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEeccc
Q 038003 58 SITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMN 137 (848)
Q Consensus 58 ~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 137 (848)
.++.++.+++ .+|.. -.+++++|+|++|.+++..|..|+++++|++|+|++|++++..|.+|+++++|++|+|++|
T Consensus 15 ~~~c~~~~l~-~ip~~---~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDD---IPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp EEECTTSCCS-SCCTT---SCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred ceEccCCCcc-cCCCC---CCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC
Confidence 3566666654 33431 2378999999999999988889999999999999999999988999999999999999999
Q ss_pred CcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccC-CCcccccccccccccccccccccccCc
Q 038003 138 QLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSG-SIPSIIGKLKSLLQLDLSENQFSGSIP 216 (848)
Q Consensus 138 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p 216 (848)
++++..|..|+.+++|++|+|++|.+++..|..++++++|++|++++|.+++ .+|..|+++++|++|+|++|++++..|
T Consensus 91 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~ 170 (606)
T 3vq2_A 91 PIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITV 170 (606)
T ss_dssp CCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECT
T ss_pred cccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecCh
Confidence 9998889999999999999999999997777899999999999999999986 579999999999999999999999888
Q ss_pred ccccCCcccc----eeeccccCCCCCCCCcccCccccccccccccccc-CcCCCcccCCCCCceEEc-------------
Q 038003 217 LSLGNLSSLT----MMSLFNNSLSGSIPPILGNLKSLSALGLHINQLN-GFIPPSIGNLSSLRVLYL------------- 278 (848)
Q Consensus 217 ~~l~~l~~L~----~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~-~~~p~~l~~l~~L~~L~L------------- 278 (848)
..++.+++|+ +|++++|.+++..+..+.. .+|+.|++++|.+. +..|..+.++++|+.+++
T Consensus 171 ~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~-~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~ 249 (606)
T 3vq2_A 171 NDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG-IKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEI 249 (606)
T ss_dssp TTTHHHHHCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSC
T ss_pred hhhhhhhccccccceeeccCCCcceeCcccccC-ceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccc
Confidence 8888888776 7999999999655555544 49999999999986 445666777777776665
Q ss_pred --------------------cCccccccCcccccCCCCCcccccccccccccc--C--CccceeeccccCCCCccccccC
Q 038003 279 --------------------YNNGLYGFVPEEIGYLKSLSELELCTNLLRGVI--P--HSIERVLLNQNNLSGKMYEAFG 334 (848)
Q Consensus 279 --------------------s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p--~~l~~l~L~~n~l~~~~~~~~~ 334 (848)
..|.+.+.+|. +..+++|+.|++++|.+.... + ..++.+.+.+|.+..++ .+
T Consensus 250 ~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp--~~- 325 (606)
T 3vq2_A 250 FEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFP--TL- 325 (606)
T ss_dssp CCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCC--CC-
T ss_pred cChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccc--cC-
Confidence 56677777776 889999999999999997542 1 36889999999996665 45
Q ss_pred CCCCccEEEccCCccccccCccccCcccccEeecccccccCC--CCCCCCCCCCccEEEccCCccCCCCccccccccccc
Q 038003 335 DHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGS--IPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLN 412 (848)
Q Consensus 335 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~--~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 412 (848)
.+++|+.|++++|...+.. .+..+++|+.|++++|++++. +|..+..+++|++|++++|.+++ +|..+..+++|+
T Consensus 326 ~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~ 402 (606)
T 3vq2_A 326 DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQ 402 (606)
T ss_dssp CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCC
T ss_pred CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCC
Confidence 8999999999999765543 677899999999999999866 37788899999999999999984 668899999999
Q ss_pred EEEccCCcCCCCCC-cccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCC-CChhHHhhhcccceecccC
Q 038003 413 KLILNLNQLSGGVP-LEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSH-KIPTEFEKLIHLSELDLSH 490 (848)
Q Consensus 413 ~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~ 490 (848)
.|++++|++++..| ..|..+++|++|++++|++++..|..|+.+++|++|++++|++++ .+|..|..+++|++|+|++
T Consensus 403 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~ 482 (606)
T 3vq2_A 403 HLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSK 482 (606)
T ss_dssp EEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred eeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCC
Confidence 99999999998877 689999999999999999999999999999999999999999997 4788999999999999999
Q ss_pred cccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccCCCCCC
Q 038003 491 NILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIPN 547 (848)
Q Consensus 491 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~ 547 (848)
|++++..|..+..+++|++|+|++|++++.+|..|..+++|+.|++++|+++. +|.
T Consensus 483 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~ 538 (606)
T 3vq2_A 483 CQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKG 538 (606)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EES
T ss_pred CcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCH
Confidence 99999999999999999999999999999999999999999999999999984 444
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2e-52 Score=510.08 Aligned_cols=478 Identities=26% Similarity=0.249 Sum_probs=400.8
Q ss_pred CCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCC-chhhhccccccEEEecccCcCCCCCccccCcCCccE
Q 038003 77 SFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLI-PPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDK 155 (848)
Q Consensus 77 ~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 155 (848)
..+++++|||++|.+++..|..|+++++|++|||++|.+.+.+ |.+|+++++|++|+|++|++++..|..|+.+++|++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 4578999999999999999999999999999999999766666 788999999999999999999999999999999999
Q ss_pred EEcCCCcCCCCCCCc--ccCccccceEEeecccccCCCc-ccccccccccccccccccccccCcccccCC--cccceeec
Q 038003 156 LALCHNNLHGSIPSS--LGNLSNLAVLYLYKNSLSGSIP-SIIGKLKSLLQLDLSENQFSGSIPLSLGNL--SSLTMMSL 230 (848)
Q Consensus 156 L~L~~n~l~~~~p~~--l~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~l 230 (848)
|+|++|.+++.+|.. ++++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..|..+..+ ++|+.|++
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L 181 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSL 181 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEE
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEEC
Confidence 999999999877765 9999999999999999997765 579999999999999999999999999888 89999999
Q ss_pred cccCCCCCCCCcccCccc------ccccccccccccCcCCCcccCC----------------------------------
Q 038003 231 FNNSLSGSIPPILGNLKS------LSALGLHINQLNGFIPPSIGNL---------------------------------- 270 (848)
Q Consensus 231 ~~n~l~~~~p~~l~~l~~------L~~L~l~~N~l~~~~p~~l~~l---------------------------------- 270 (848)
++|.+.+..|..++.+.+ |+.|++++|++++.++..+...
T Consensus 182 ~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~ 261 (844)
T 3j0a_A 182 AANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFA 261 (844)
T ss_dssp CCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTT
T ss_pred CCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhh
Confidence 999999998888877766 9999999999887776655432
Q ss_pred ----CCCceEEccCccccccCcccccCCCCCccccccccccccccCC------ccceeeccccCCCCccccccCCCCCcc
Q 038003 271 ----SSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPH------SIERVLLNQNNLSGKMYEAFGDHPNLT 340 (848)
Q Consensus 271 ----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~------~l~~l~L~~n~l~~~~~~~~~~l~~L~ 340 (848)
++|+.|++++|.+.+..|..+..+++|+.|++++|.+++..|. .++.|.+++|.++.+.+..|..+++|+
T Consensus 262 ~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 341 (844)
T 3j0a_A 262 GLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVA 341 (844)
T ss_dssp TTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCC
T ss_pred ccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCC
Confidence 5688888888888877788888888888888888888776553 466777888888877777788888888
Q ss_pred EEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCc
Q 038003 341 FLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQ 420 (848)
Q Consensus 341 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~ 420 (848)
.|++++|++.+..+..|..+++|+.|++++|.+++ +..+++|+.|++++|+++ .+|.. ..+++.|++++|+
T Consensus 342 ~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-----i~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~ 412 (844)
T 3j0a_A 342 YIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-----IHFIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENR 412 (844)
T ss_dssp EEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-----CSSCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCC
T ss_pred EEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-----ccCCCCcchhccCCCCcc-ccccc---ccccceeecccCc
Confidence 88888888877777777788888888888888763 223677888888888887 44433 4578888888888
Q ss_pred CCCCCC-cccCCCCccCeEeccCcccCCCCCC-cccCccccceeccccCcCC-----CCChhHHhhhcccceecccCccc
Q 038003 421 LSGGVP-LEFGSLTKLQYLDLSTNKLSSSIPK-SIGNLLKLHYLNLSNNQLS-----HKIPTEFEKLIHLSELDLSHNIL 493 (848)
Q Consensus 421 l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l 493 (848)
+++... ..+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|+|
T Consensus 413 l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 492 (844)
T 3j0a_A 413 LENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYL 492 (844)
T ss_dssp CCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHH
T ss_pred cccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcc
Confidence 885422 2356899999999999999976544 4667899999999999997 44556789999999999999999
Q ss_pred CcCCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccCCCCCCCCcc-cccccccccCcccc
Q 038003 494 QEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIPNSTAF-KDGLMEGNKGLKRV 565 (848)
Q Consensus 494 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~~~-~~~~~~~~~~l~~~ 565 (848)
++..|..|..+++|++|+|++|+|++..+..+. ++|+.|++++|++++.+|..... ..-.+.+|+..+.|
T Consensus 493 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 493 NSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICEC 563 (844)
T ss_dssp TTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSS
T ss_pred cccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccc
Confidence 999999999999999999999999998777776 89999999999999998865331 11134566655444
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.9e-53 Score=491.43 Aligned_cols=480 Identities=23% Similarity=0.224 Sum_probs=395.9
Q ss_pred CCccCceEEcCCCCceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCc
Q 038003 41 PCSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIP 120 (848)
Q Consensus 41 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 120 (848)
.|.|.|| |+-....++ .+|+. + .++|++|+|++|.+++..|.+|+++++|++|+|++|++++..|
T Consensus 3 ~C~~~~~-c~~~~~~l~-----------~ip~~-~--~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~ 67 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFT-----------SIPSG-L--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEG 67 (549)
T ss_dssp EECTTSE-EECTTSCCS-----------SCCSC-C--CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECT
T ss_pred cCCCCce-EECCCCccc-----------ccccc-C--CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccCh
Confidence 4999999 975443332 23331 2 3789999999999998888999999999999999999998888
Q ss_pred hhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCC-CCCCcccCccccceEEeecccccCCCc-cccccc
Q 038003 121 PEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHG-SIPSSLGNLSNLAVLYLYKNSLSGSIP-SIIGKL 198 (848)
Q Consensus 121 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~l~~N~l~~~~p-~~~~~l 198 (848)
.+|+++++|++|+|++|++++..|..|+.+++|++|+|++|++++ .+|..++++++|++|++++|.+.+.+| ..|+++
T Consensus 68 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l 147 (549)
T 2z81_A 68 DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL 147 (549)
T ss_dssp TTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred hhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcc
Confidence 899999999999999999998777789999999999999999986 467789999999999999998555555 689999
Q ss_pred ccccccccccccccccCcccccCCcccceeeccccCCCCCCCCc-ccCcccccccccccccccCcC--C-CcccCCCCCc
Q 038003 199 KSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPI-LGNLKSLSALGLHINQLNGFI--P-PSIGNLSSLR 274 (848)
Q Consensus 199 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~-l~~l~~L~~L~l~~N~l~~~~--p-~~l~~l~~L~ 274 (848)
++|++|++++|++++.+|..++.+++|++|++++|.+. .+|.. +..+++|++|++++|++++.. | .....+++|+
T Consensus 148 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~ 226 (549)
T 2z81_A 148 TSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMK 226 (549)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCC
T ss_pred cccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhccc
Confidence 99999999999999999999999999999999999987 45544 356899999999999998752 2 2234578899
Q ss_pred eEEccCccccccCc----ccccCCCCCcccccccccccccc------------CCccceeeccccCCCCccc-----ccc
Q 038003 275 VLYLYNNGLYGFVP----EEIGYLKSLSELELCTNLLRGVI------------PHSIERVLLNQNNLSGKMY-----EAF 333 (848)
Q Consensus 275 ~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~------------p~~l~~l~L~~n~l~~~~~-----~~~ 333 (848)
.|++++|.+++..+ ..+..+++|+.+++++|.+.+.. -..++.+.+.++.+..... ..+
T Consensus 227 ~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~ 306 (549)
T 2z81_A 227 KLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVY 306 (549)
T ss_dssp EEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHH
T ss_pred ceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhh
Confidence 99999999876544 34467789999999999887641 1246667777776654321 112
Q ss_pred CCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCC---CCCCCCCCccEEEccCCccCCCCc--cccccc
Q 038003 334 GDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIP---PDIGNSPKLQVLDLSSNHIVGKIP--VQLEML 408 (848)
Q Consensus 334 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p---~~l~~l~~L~~L~Ls~N~l~~~~~--~~l~~l 408 (848)
...++|+.|++++|.++......+..+++|+.|++++|++.+.+| ..++.+++|++|+|++|++++..+ ..+..+
T Consensus 307 ~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l 386 (549)
T 2z81_A 307 SLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTL 386 (549)
T ss_dssp HHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGC
T ss_pred hhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcC
Confidence 234689999999999985443334679999999999999987663 458889999999999999986543 568999
Q ss_pred ccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCChhHHhhhcccceecc
Q 038003 409 SSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDL 488 (848)
Q Consensus 409 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 488 (848)
++|++|++++|+++ .+|..+..+++|++|++++|++++ +|..+ .++|++|+|++|+|++.+ ..+++|++|+|
T Consensus 387 ~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~L 458 (549)
T 2z81_A 387 KNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYI 458 (549)
T ss_dssp TTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEEC
T ss_pred CCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcEEEC
Confidence 99999999999999 678889999999999999999984 44443 268999999999999754 57889999999
Q ss_pred cCcccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccCCCCC
Q 038003 489 SHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIP 546 (848)
Q Consensus 489 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 546 (848)
++|+|+ .+|. ...+++|++|+|++|++++.+|..|..+++|+.+++++|++.+..|
T Consensus 459 s~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 459 SRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 999997 5665 5789999999999999999999999999999999999999987665
No 14
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.9e-53 Score=497.95 Aligned_cols=434 Identities=22% Similarity=0.297 Sum_probs=348.3
Q ss_pred CCCcEEeccCCcccccccccccCCCCCcEEEccccCC------CC------CCchhhhccccccEEEecccCcCCCCCcc
Q 038003 79 PHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQL------SG------LIPPEIGKLNQLRRLYLDMNQLHGTIPPE 146 (848)
Q Consensus 79 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l------~~------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 146 (848)
.+++.|+|++|.+.|.+|++|++|++|++|||++|.+ .| .+|... +.+|+ ++++.|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 4789999999999999999999999999999999976 34 566655 67788 999999999988888
Q ss_pred ccC-cCCccEEEcCCCcCCCCCCCcccCccccceEEe--ecccccCCCccccccccccccccccccccccc---------
Q 038003 147 IGQ-LSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYL--YKNSLSGSIPSIIGKLKSLLQLDLSENQFSGS--------- 214 (848)
Q Consensus 147 ~~~-l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l--~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--------- 214 (848)
++. +..+..+++....+.. .....++.+.+ ..|+++| +|..|+++++|++|+|++|+++|.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred HHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccc
Confidence 774 3344444444333321 11122333333 3466776 677777777777777777777764
Q ss_pred --------Cccccc--CCcccceeeccccCCCCCCCCcccCccccccccccccc-ccC-cCCCcccCC------CCCceE
Q 038003 215 --------IPLSLG--NLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQ-LNG-FIPPSIGNL------SSLRVL 276 (848)
Q Consensus 215 --------~p~~l~--~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~-l~~-~~p~~l~~l------~~L~~L 276 (848)
+|..++ ++++|++|++++|++.+.+|..++++++|++|++++|+ ++| .+|..++.+ ++|++|
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L 310 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQII 310 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEE
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEE
Confidence 777777 77788888888887777777777778888888888887 777 677777665 788888
Q ss_pred EccCccccccCcc--cccCCCCCccccccccccccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccC
Q 038003 277 YLYNNGLYGFVPE--EIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEIS 354 (848)
Q Consensus 277 ~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 354 (848)
++++|.++ .+|. .++.+++|+.|++++|.++|.+| .+ +.+++|++|++++|+++ .+|
T Consensus 311 ~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~------------------~~l~~L~~L~L~~N~l~-~lp 369 (636)
T 4eco_A 311 YIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF------------------GSEIKLASLNLAYNQIT-EIP 369 (636)
T ss_dssp ECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC------------------EEEEEESEEECCSSEEE-ECC
T ss_pred ECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh------------------CCCCCCCEEECCCCccc-ccc
Confidence 88888887 6777 78888888888888888877666 33 34568888888888888 667
Q ss_pred ccccCccc-ccEeecccccccCCCCCCCCCCC--CccEEEccCCccCCCCccccc-------ccccccEEEccCCcCCCC
Q 038003 355 FNWGNFSK-LSTFIVSMNNISGSIPPDIGNSP--KLQVLDLSSNHIVGKIPVQLE-------MLSSLNKLILNLNQLSGG 424 (848)
Q Consensus 355 ~~~~~l~~-L~~L~l~~N~i~~~~p~~l~~l~--~L~~L~Ls~N~l~~~~~~~l~-------~l~~L~~L~L~~N~l~~~ 424 (848)
..+..+++ |+.|++++|+++ .+|..+..++ +|++|++++|++++..|..+. .+++|+.|+|++|++++.
T Consensus 370 ~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~l 448 (636)
T 4eco_A 370 ANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKF 448 (636)
T ss_dssp TTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSC
T ss_pred HhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcC
Confidence 77888888 999999999988 7888888765 899999999999999999888 888999999999999955
Q ss_pred CCcccCCCCccCeEeccCcccCCCCCCc-ccCc-------cccceeccccCcCCCCChhHHh--hhcccceecccCcccC
Q 038003 425 VPLEFGSLTKLQYLDLSTNKLSSSIPKS-IGNL-------LKLHYLNLSNNQLSHKIPTEFE--KLIHLSELDLSHNILQ 494 (848)
Q Consensus 425 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~ 494 (848)
.+..+..+++|++|+|++|+++ .+|.. +..+ ++|++|+|++|+|+ .+|..+. .+++|+.|+|++|+|+
T Consensus 449 p~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~ 526 (636)
T 4eco_A 449 PKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFS 526 (636)
T ss_dssp CTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCS
T ss_pred CHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCC
Confidence 5555667999999999999999 55544 4333 39999999999999 6788886 9999999999999998
Q ss_pred cCCCccccCCCCCccccC------CCCcccCCCcchhccccCceeecCCCCccCCCCCCC
Q 038003 495 EEIPPQVCNMGSLEKLNL------SHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIPNS 548 (848)
Q Consensus 495 ~~~p~~~~~l~~L~~L~L------s~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~ 548 (848)
+ +|..+..+++|++|+| ++|++.+.+|..+..+++|+.|++++|++ +.+|..
T Consensus 527 ~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~ 584 (636)
T 4eco_A 527 K-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK 584 (636)
T ss_dssp S-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC
T ss_pred C-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh
Confidence 7 8999999999999999 56888999999999999999999999999 777764
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-51 Score=483.22 Aligned_cols=485 Identities=23% Similarity=0.238 Sum_probs=311.2
Q ss_pred ceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEe
Q 038003 55 RVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYL 134 (848)
Q Consensus 55 ~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 134 (848)
++..|+++++.+.+. ++.+|..+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 29 ~l~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 29 STKNLDLSFNPLRHL-GSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SCCEEECCSCCCCEE-CTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred cccEEEccCCccCcc-ChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 344455555444432 2223455555555555555555444444555555555555555555444445555555555555
Q ss_pred cccCcCCCCCccccCcCCccEEEcCCCcCCC-CCCCcccCccccceEEeecccccCCCcccccccccc----cccccccc
Q 038003 135 DMNQLHGTIPPEIGQLSLIDKLALCHNNLHG-SIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSL----LQLDLSEN 209 (848)
Q Consensus 135 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L----~~L~L~~N 209 (848)
++|++++..+..++.+++|++|+|++|.+++ .+|..++++++|++|++++|++++..|..++.+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 5555553333345555555555555555543 245555555555555555555554444445555444 44555555
Q ss_pred cccccCcccccCCcccceeeccccCCCCC-CCCcccCccccccccccccc------ccCcCCCcccCCC--CCceEEccC
Q 038003 210 QFSGSIPLSLGNLSSLTMMSLFNNSLSGS-IPPILGNLKSLSALGLHINQ------LNGFIPPSIGNLS--SLRVLYLYN 280 (848)
Q Consensus 210 ~l~~~~p~~l~~l~~L~~L~l~~n~l~~~-~p~~l~~l~~L~~L~l~~N~------l~~~~p~~l~~l~--~L~~L~Ls~ 280 (848)
.+++..|..+..+ +|+.|++++|..... ++..+..++.++.+.+..+. +.......+..+. .++.+++++
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 5554444444333 455555554422110 11111111111111111000 0000111111111 123344444
Q ss_pred c-cccccCcccccCCCCCccccccccccccccCC-----ccceeeccccCCCCccccccCCCCCccEEEccCCccccccC
Q 038003 281 N-GLYGFVPEEIGYLKSLSELELCTNLLRGVIPH-----SIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEIS 354 (848)
Q Consensus 281 N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-----~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 354 (848)
| .+.+..|..+..+++|+.|++++|.+.+. |. .++.+.+.+|.+..++. ..+++|+.|++++|.+.+..+
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l-~~~~~~~~L~~L~l~~n~~~~l~~---~~l~~L~~L~l~~n~~~~~~~ 342 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIERV-KDFSYNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNAFS 342 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEECSC-CBCCSCCCCSEEEEESCBCSSCCB---CBCSSCCEEEEESCBSCCBCC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccchhh-hhhhccCCccEEeeccCcccccCc---ccccccCEEeCcCCccccccc
Confidence 4 34444445555555555555555555432 21 34445555555554333 356889999999999887665
Q ss_pred ccccCcccccEeecccccccCCC--CCCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCC-cccCC
Q 038003 355 FNWGNFSKLSTFIVSMNNISGSI--PPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVP-LEFGS 431 (848)
Q Consensus 355 ~~~~~l~~L~~L~l~~N~i~~~~--p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~ 431 (848)
. ..+++|+.|++++|++++.. |..+..+++|++|++++|.+++..+. +..+++|+.|++++|.+++..+ ..+..
T Consensus 343 ~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 419 (570)
T 2z63_A 343 E--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLS 419 (570)
T ss_dssp C--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTT
T ss_pred c--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhc
Confidence 4 78899999999999998654 66788899999999999999965544 9999999999999999997766 57899
Q ss_pred CCccCeEeccCcccCCCCCCcccCccccceeccccCcCC-CCChhHHhhhcccceecccCcccCcCCCccccCCCCCccc
Q 038003 432 LTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLS-HKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKL 510 (848)
Q Consensus 432 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 510 (848)
+++|++|++++|++++..|..|..+++|++|+|++|+++ +.+|..|..+++|++|+|++|++++..|..+..+++|++|
T Consensus 420 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 499 (570)
T 2z63_A 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499 (570)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEE
Confidence 999999999999999999999999999999999999998 5788999999999999999999999889999999999999
Q ss_pred cCCCCcccCCCcchhccccCceeecCCCCccCCCCCCC
Q 038003 511 NLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIPNS 548 (848)
Q Consensus 511 ~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~ 548 (848)
+|++|++++.++..|..+++|+.+++++|++++..|..
T Consensus 500 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 500 NMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred eCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 99999999988889999999999999999999988754
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.4e-50 Score=470.08 Aligned_cols=462 Identities=22% Similarity=0.218 Sum_probs=372.2
Q ss_pred ceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEe
Q 038003 55 RVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYL 134 (848)
Q Consensus 55 ~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 134 (848)
.+..|+++++.+.+ +++..|.++++|++|+|++|.+++..|.+|+.+++|++|+|++|++++..+..|+++++|++|+|
T Consensus 53 ~L~~L~Ls~n~i~~-i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 131 (570)
T 2z63_A 53 ELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (570)
T ss_dssp SCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEEC
T ss_pred CceEEECCCCcCCc-cCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEec
Confidence 57789999988876 44457999999999999999999888899999999999999999999776667999999999999
Q ss_pred cccCcCC-CCCccccCcCCccEEEcCCCcCCCCCCCcccCcccc----ceEEeecccccCCCcccccccccccccccccc
Q 038003 135 DMNQLHG-TIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNL----AVLYLYKNSLSGSIPSIIGKLKSLLQLDLSEN 209 (848)
Q Consensus 135 ~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L----~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 209 (848)
++|.+++ .+|..|+.+++|++|++++|++++..|..++.+++| +.|++++|.+++..|..+..+ +|++|++++|
T Consensus 132 ~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n 210 (570)
T 2z63_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNN 210 (570)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESC
T ss_pred CCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccc
Confidence 9999997 579999999999999999999998888889999999 899999999998888888766 8999999998
Q ss_pred cccc-cCcccccCCcccceeeccccCCCC------CCCCcccCcc--cccccccccc-cccCcCCCcccCCCCCceEEcc
Q 038003 210 QFSG-SIPLSLGNLSSLTMMSLFNNSLSG------SIPPILGNLK--SLSALGLHIN-QLNGFIPPSIGNLSSLRVLYLY 279 (848)
Q Consensus 210 ~l~~-~~p~~l~~l~~L~~L~l~~n~l~~------~~p~~l~~l~--~L~~L~l~~N-~l~~~~p~~l~~l~~L~~L~Ls 279 (848)
.... .++..+..+++++.+.+..+.+.+ .....+..+. .++.++++.| .+.+.+|..+..+++|++|+++
T Consensus 211 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~ 290 (570)
T 2z63_A 211 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLV 290 (570)
T ss_dssp CSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEE
T ss_pred cccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEec
Confidence 6442 344555566665555443322211 1111222222 2344555555 5555566666666666666666
Q ss_pred CccccccCcccccCCCCCccccccccccccccC---CccceeeccccCCCCccccccCCCCCccEEEccCCcccccc--C
Q 038003 280 NNGLYGFVPEEIGYLKSLSELELCTNLLRGVIP---HSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEI--S 354 (848)
Q Consensus 280 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~ 354 (848)
+|.+. .+|..+..+ +|+.|++++|.+....+ ..++.+.+.+|.+...... ..+++|++|++++|++++.. +
T Consensus 291 ~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~ 366 (570)
T 2z63_A 291 SVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCS 366 (570)
T ss_dssp SCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEE
T ss_pred Cccch-hhhhhhccC-CccEEeeccCcccccCcccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCcccccc
Confidence 66665 355555555 66666666666653211 2355566666665544333 57899999999999998765 6
Q ss_pred ccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCc-ccccccccccEEEccCCcCCCCCCcccCCCC
Q 038003 355 FNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIP-VQLEMLSSLNKLILNLNQLSGGVPLEFGSLT 433 (848)
Q Consensus 355 ~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 433 (848)
..+..+++|+.|++++|.+.+..+. +..+++|++|++++|.+.+..+ ..+..+++|++|++++|.+++..|..|..++
T Consensus 367 ~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 445 (570)
T 2z63_A 367 QSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 445 (570)
T ss_dssp HHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCT
T ss_pred ccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCC
Confidence 6788899999999999999865544 8999999999999999997766 5789999999999999999999999999999
Q ss_pred ccCeEeccCcccC-CCCCCcccCccccceeccccCcCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccC
Q 038003 434 KLQYLDLSTNKLS-SSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNL 512 (848)
Q Consensus 434 ~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (848)
+|++|++++|+++ +.+|..++.+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..+..+++|++|++
T Consensus 446 ~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 525 (570)
T 2z63_A 446 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWL 525 (570)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred cCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEe
Confidence 9999999999998 578999999999999999999999988999999999999999999999988888999999999999
Q ss_pred CCCcccCCCcc
Q 038003 513 SHNNLSDFIPR 523 (848)
Q Consensus 513 s~N~l~~~~~~ 523 (848)
++|++++..|.
T Consensus 526 ~~N~~~~~~~~ 536 (570)
T 2z63_A 526 HTNPWDCSCPR 536 (570)
T ss_dssp CSSCBCCCTTT
T ss_pred cCCcccCCCcc
Confidence 99999987664
No 17
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.6e-50 Score=464.12 Aligned_cols=458 Identities=22% Similarity=0.185 Sum_probs=373.3
Q ss_pred EEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEeccc
Q 038003 58 SITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMN 137 (848)
Q Consensus 58 ~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 137 (848)
.+++++++++ .+|.. +. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 4 ~l~ls~n~l~-~ip~~-~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKD-LS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp EEECTTSCCS-SCCCS-CC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred eEecCCCCcc-ccccc-cc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 4677777777 46542 33 78999999999998877788899999999999999998887888999999999999999
Q ss_pred CcCCCCCccccCcCCccEEEcCCCcCCC-CCCCcccCccccceEEeecccccCCCcccccccccc--cccccccccc--c
Q 038003 138 QLHGTIPPEIGQLSLIDKLALCHNNLHG-SIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSL--LQLDLSENQF--S 212 (848)
Q Consensus 138 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~ 212 (848)
+++ .+|.. .+++|++|+|++|++++ .+|..++++++|++|++++|++++ ..++.+++| ++|+|++|++ +
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 988 56666 78889999999999887 478888999999999999998875 456677777 8999999988 7
Q ss_pred ccCcccccCCc-ccceeeccccCCCCCCCC-cccCccccccccccccc-------ccCcCCCcccCCCCCceEEccCccc
Q 038003 213 GSIPLSLGNLS-SLTMMSLFNNSLSGSIPP-ILGNLKSLSALGLHINQ-------LNGFIPPSIGNLSSLRVLYLYNNGL 283 (848)
Q Consensus 213 ~~~p~~l~~l~-~L~~L~l~~n~l~~~~p~-~l~~l~~L~~L~l~~N~-------l~~~~p~~l~~l~~L~~L~Ls~N~l 283 (848)
+..|..+..+. +...+++++|.+.+.++. .+..+++|+.|++++|+ +.+.+| .+..+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 78888887766 455678888888876654 67788899999999887 776666 688888899999988887
Q ss_pred cccCccccc---CCCCCccccccccccccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccC-ccccC
Q 038003 284 YGFVPEEIG---YLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEIS-FNWGN 359 (848)
Q Consensus 284 ~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~ 359 (848)
.+..+..+. ..++|++|++++|.+.|.+|..+... ..+.+++|+.+++++|.+ ..| ..+..
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~-------------~~~~l~~L~~l~l~~n~~--~~p~~~~~~ 297 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDY-------------SGTSLKALSIHQVVSDVF--GFPQSYIYE 297 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCC-------------CSCCCCEEEEEEEEECCC--CSCTHHHHH
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhc-------------ccccCceeEeccccccce--ecchhhhhc
Confidence 754332221 24578888888888887777643110 126789999999999998 333 33444
Q ss_pred c---ccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCC--CCCcccCCCCc
Q 038003 360 F---SKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSG--GVPLEFGSLTK 434 (848)
Q Consensus 360 l---~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~ 434 (848)
+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..+..+++|++|++++|++++ .+|..+..+++
T Consensus 298 ~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~ 375 (520)
T 2z7x_B 298 IFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKS 375 (520)
T ss_dssp HHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTT
T ss_pred ccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCC
Confidence 3 67999999999987432 23688999999999999999899999999999999999999996 45677999999
Q ss_pred cCeEeccCcccCCCCCC-cccCccccceeccccCcCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCC
Q 038003 435 LQYLDLSTNKLSSSIPK-SIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLS 513 (848)
Q Consensus 435 L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 513 (848)
|++|++++|++++.+|. .+..+++|++|+|++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|+
T Consensus 376 L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~ 452 (520)
T 2z7x_B 376 LQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVA 452 (520)
T ss_dssp CCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECC
T ss_pred CCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECC
Confidence 99999999999985554 588899999999999999987776664 68999999999997 788888899999999999
Q ss_pred CCcccCCCcchhccccCceeecCCCCccCCCCC
Q 038003 514 HNNLSDFIPRCFEEMRSLSCIDISYNELHGPIP 546 (848)
Q Consensus 514 ~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 546 (848)
+|+|++..+..|..+++|+.+++++|++++..+
T Consensus 453 ~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 453 SNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 999997554559999999999999999986443
No 18
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.9e-49 Score=474.95 Aligned_cols=415 Identities=21% Similarity=0.247 Sum_probs=278.5
Q ss_pred CCCcEEeccCCcccccccccccCCCCCcEEEc-cccCCCCCCchhhhc--------------------------------
Q 038003 79 PHLANLNLSFNLFFGNIPLQIGNLSKLQYLDL-GSNQLSGLIPPEIGK-------------------------------- 125 (848)
Q Consensus 79 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~L-s~n~l~~~~p~~~~~-------------------------------- 125 (848)
.+++.|+|++|++.|.+|++|++|++|++||| ++|.++|..|-....
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 889888874422111
Q ss_pred -------------------cccccEEEec--ccCcCCCCCccccCcCCccEEEcCCCcCCC-----------------CC
Q 038003 126 -------------------LNQLRRLYLD--MNQLHGTIPPEIGQLSLIDKLALCHNNLHG-----------------SI 167 (848)
Q Consensus 126 -------------------l~~L~~L~L~--~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~~ 167 (848)
...++.+.++ .|+++| +|..|+.+++|++|+|++|+|+| .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 1112222222 255665 66666666666666666666665 25
Q ss_pred CCccc--CccccceEEeecccccCCCccccccccccccccccccc-ccc-cCcccccCCc-------ccceeeccccCCC
Q 038003 168 PSSLG--NLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQ-FSG-SIPLSLGNLS-------SLTMMSLFNNSLS 236 (848)
Q Consensus 168 p~~l~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l~-------~L~~L~l~~n~l~ 236 (848)
|+.++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..++.++ +|+.|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 66655 66666666666666666666666666666666666665 665 5565555444 5666666666665
Q ss_pred CCCCC--cccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCC-CccccccccccccccCC
Q 038003 237 GSIPP--ILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKS-LSELELCTNLLRGVIPH 313 (848)
Q Consensus 237 ~~~p~--~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~ 313 (848)
.+|. .++++++|+.|+|++|+++ .+| .|+.+++|+.|+|++|.+. .+|..+..+++ |+.|++++|.++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 5555 5566666666666666655 445 5555666666666666655 45555555555 555555555554 2332
Q ss_pred ccceeeccccCCCCccccccCCC--CCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCC--CCCCccE
Q 038003 314 SIERVLLNQNNLSGKMYEAFGDH--PNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIG--NSPKLQV 389 (848)
Q Consensus 314 ~l~~l~L~~n~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~--~l~~L~~ 389 (848)
. +..+ ++|+.|+|++|++++.++. ++..+. .+++|+.
T Consensus 637 ~------------------~~~~~~~~L~~L~Ls~N~l~g~ip~---------------------l~~~l~~~~~~~L~~ 677 (876)
T 4ecn_A 637 I------------------FNAKSVYVMGSVDFSYNKIGSEGRN---------------------ISCSMDDYKGINAST 677 (876)
T ss_dssp C------------------CCTTCSSCEEEEECCSSCTTTTSSS---------------------CSSCTTTCCCCCEEE
T ss_pred h------------------hhccccCCCCEEECcCCcCCCcccc---------------------chhhhccccCCCcCE
Confidence 1 1111 2355555555555443221 111222 3357888
Q ss_pred EEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCC--------CCccCeEeccCcccCCCCCCccc--Ccccc
Q 038003 390 LDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGS--------LTKLQYLDLSTNKLSSSIPKSIG--NLLKL 459 (848)
Q Consensus 390 L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L 459 (848)
|+|++|+++...+..+..+++|+.|+|++|+++ .+|..+.. +++|+.|+|++|+|+ .+|..+. .+++|
T Consensus 678 L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L 755 (876)
T 4ecn_A 678 VTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYL 755 (876)
T ss_dssp EECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTC
T ss_pred EEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCc
Confidence 888888888433334457888888888888888 44443332 238888888888888 6777776 88888
Q ss_pred ceeccccCcCCCCChhHHhhhcccceecccC------cccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCcee
Q 038003 460 HYLNLSNNQLSHKIPTEFEKLIHLSELDLSH------NILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSC 533 (848)
Q Consensus 460 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 533 (848)
+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|..+..+++|+.|+|++|+| +.+|..+. ++|+.
T Consensus 756 ~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~ 831 (876)
T 4ecn_A 756 SNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYI 831 (876)
T ss_dssp CEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCE
T ss_pred CEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCE
Confidence 888888888886 687888888888888866 889999999999999999999999999 66787765 69999
Q ss_pred ecCCCCccCCC
Q 038003 534 IDISYNELHGP 544 (848)
Q Consensus 534 l~ls~N~l~~~ 544 (848)
|++++|++...
T Consensus 832 LdLs~N~l~~i 842 (876)
T 4ecn_A 832 LDIADNPNISI 842 (876)
T ss_dssp EECCSCTTCEE
T ss_pred EECCCCCCCcc
Confidence 99999998643
No 19
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.3e-49 Score=458.00 Aligned_cols=469 Identities=19% Similarity=0.164 Sum_probs=401.1
Q ss_pred CccCceEEcC--CCCceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCC
Q 038003 42 CSWFGISCNH--AGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLI 119 (848)
Q Consensus 42 c~w~gv~C~~--~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 119 (848)
|++.+++.-+ ...+++.|+++++.+.+..+ ..|..+++|++|+|++|.+++..|.+|+++++|++|||++|++++..
T Consensus 12 ~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 90 (549)
T 2z81_A 12 GRSRSFTSIPSGLTAAMKSLDLSFNKITYIGH-GDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLS 90 (549)
T ss_dssp CTTSCCSSCCSCCCTTCCEEECCSSCCCEECS-STTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCC
T ss_pred CCCCccccccccCCCCccEEECcCCccCccCh-hhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccC
Confidence 4566665432 22479999999999887654 46899999999999999999988899999999999999999999888
Q ss_pred chhhhccccccEEEecccCcCC-CCCccccCcCCccEEEcCCCcCCCCCC-CcccCccccceEEeecccccCCCcccccc
Q 038003 120 PPEIGKLNQLRRLYLDMNQLHG-TIPPEIGQLSLIDKLALCHNNLHGSIP-SSLGNLSNLAVLYLYKNSLSGSIPSIIGK 197 (848)
Q Consensus 120 p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~l~~N~l~~~~p~~~~~ 197 (848)
|..|+++++|++|+|++|++++ .+|..++.+++|++|++++|.+.+.+| ..++++++|++|++++|++++.+|..++.
T Consensus 91 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 170 (549)
T 2z81_A 91 SSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS 170 (549)
T ss_dssp HHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred HHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc
Confidence 8889999999999999999997 467899999999999999999655666 58999999999999999999999999999
Q ss_pred cccccccccccccccccCccc-ccCCcccceeeccccCCCCCC--C-CcccCcccccccccccccccCcCCC----cccC
Q 038003 198 LKSLLQLDLSENQFSGSIPLS-LGNLSSLTMMSLFNNSLSGSI--P-PILGNLKSLSALGLHINQLNGFIPP----SIGN 269 (848)
Q Consensus 198 l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~l~~n~l~~~~--p-~~l~~l~~L~~L~l~~N~l~~~~p~----~l~~ 269 (848)
+++|++|+++.|.+. .+|.. +..+++|++|++++|++++.. | .....+++|+.|++++|++++..+. .+..
T Consensus 171 l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~ 249 (549)
T 2z81_A 171 IRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRY 249 (549)
T ss_dssp CSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGG
T ss_pred cccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhh
Confidence 999999999999987 45554 467999999999999999742 2 2334678999999999999875443 3467
Q ss_pred CCCCceEEccCccccccC------cccccCCCCCccccccccccccc-----------cCCccceeeccccCCCCccccc
Q 038003 270 LSSLRVLYLYNNGLYGFV------PEEIGYLKSLSELELCTNLLRGV-----------IPHSIERVLLNQNNLSGKMYEA 332 (848)
Q Consensus 270 l~~L~~L~Ls~N~l~~~~------p~~~~~l~~L~~L~L~~N~l~~~-----------~p~~l~~l~L~~n~l~~~~~~~ 332 (848)
+++|+.+++++|.+.+.. ...+..+.+|+.|++.++.+... ....++.+.+.+|.++.++...
T Consensus 250 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~ 329 (549)
T 2z81_A 250 ILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSF 329 (549)
T ss_dssp CTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHH
T ss_pred hccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHH
Confidence 789999999999987632 23456788999999998877643 2346899999999999888777
Q ss_pred cCCCCCccEEEccCCccccccC---ccccCcccccEeecccccccCCCC--CCCCCCCCccEEEccCCccCCCCcccccc
Q 038003 333 FGDHPNLTFLDLSNNNFCGEIS---FNWGNFSKLSTFIVSMNNISGSIP--PDIGNSPKLQVLDLSSNHIVGKIPVQLEM 407 (848)
Q Consensus 333 ~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~l~~N~i~~~~p--~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~ 407 (848)
+..+++|++|++++|++++..+ ..++.+++|+.|++++|++++..+ ..+..+++|++|++++|+++ .+|..+..
T Consensus 330 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 408 (549)
T 2z81_A 330 SQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQW 408 (549)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCC
T ss_pred HhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcc
Confidence 7789999999999999998763 447889999999999999986432 45888999999999999999 68888999
Q ss_pred cccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCChhHHhhhcccceec
Q 038003 408 LSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELD 487 (848)
Q Consensus 408 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 487 (848)
+++|++|++++|++++ +|..+ .++|++|++++|+|++.. ..+++|++|+|++|+|+ .+|. ...+++|++|+
T Consensus 409 ~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~ 479 (549)
T 2z81_A 409 PEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMK 479 (549)
T ss_dssp CTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEE
T ss_pred cccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEe
Confidence 9999999999999984 44443 268999999999999653 57899999999999998 5665 56789999999
Q ss_pred ccCcccCcCCCccccCCCCCccccCCCCcccCCCc
Q 038003 488 LSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIP 522 (848)
Q Consensus 488 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 522 (848)
|++|+|++.+|..+..+++|+.|++++|++++..|
T Consensus 480 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 480 ISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred cCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 99999999888899999999999999999998765
No 20
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-48 Score=451.17 Aligned_cols=438 Identities=21% Similarity=0.203 Sum_probs=376.0
Q ss_pred CceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEE
Q 038003 54 SRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLY 133 (848)
Q Consensus 54 ~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 133 (848)
.+++.|+++++.+.+..+ ..|..+++|++|+|++|.+++..|..|+++++|++|||++|+++ .+|.. .+++|++|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 96 (520)
T 2z7x_B 21 QKTTILNISQNYISELWT-SDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLD 96 (520)
T ss_dssp TTCSEEECCSSCCCCCCH-HHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEE
T ss_pred ccccEEECCCCcccccCh-hhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEe
Confidence 578999999999887543 36899999999999999999988999999999999999999999 46766 899999999
Q ss_pred ecccCcCC-CCCccccCcCCccEEEcCCCcCCCCCCCcccCcccc--ceEEeecccc--cCCCcccccccc-cccccccc
Q 038003 134 LDMNQLHG-TIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNL--AVLYLYKNSL--SGSIPSIIGKLK-SLLQLDLS 207 (848)
Q Consensus 134 L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L--~~L~l~~N~l--~~~~p~~~~~l~-~L~~L~L~ 207 (848)
|++|++++ .+|..++.+++|++|+|++|++++ ..++.+++| ++|++++|.+ ++..|..++.+. +...++++
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~ 173 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFP 173 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECC
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEec
Confidence 99999997 589999999999999999999986 457778888 9999999999 888898888876 45578899
Q ss_pred cccccccCcc-cccCCcccceeeccccC-------CCCCCCCcccCcccccccccccccccCcCCCccc---CCCCCceE
Q 038003 208 ENQFSGSIPL-SLGNLSSLTMMSLFNNS-------LSGSIPPILGNLKSLSALGLHINQLNGFIPPSIG---NLSSLRVL 276 (848)
Q Consensus 208 ~N~l~~~~p~-~l~~l~~L~~L~l~~n~-------l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~---~l~~L~~L 276 (848)
+|++.+.++. .+..+++|+.|++++|. +.+.+| .++.+++|+.|++++|.+.+..+..+. ..++|++|
T Consensus 174 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L 252 (520)
T 2z7x_B 174 TNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYF 252 (520)
T ss_dssp SSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEE
T ss_pred cCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEE
Confidence 9999877665 57889999999999998 666666 789999999999999998764333221 24689999
Q ss_pred EccCccccccCcccc-----cCCCCCccccccccccccccCC-ccceeeccccCCCCccccccCCCCCccEEEccCCccc
Q 038003 277 YLYNNGLYGFVPEEI-----GYLKSLSELELCTNLLRGVIPH-SIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFC 350 (848)
Q Consensus 277 ~Ls~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p~-~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 350 (848)
++++|.+.+.+|..+ ..+++|+.++++.|.+ .+|. .+.. +....+|+.|++++|.+.
T Consensus 253 ~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~---------------~~~~~~L~~L~l~~n~l~ 315 (520)
T 2z7x_B 253 SISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYE---------------IFSNMNIKNFTVSGTRMV 315 (520)
T ss_dssp EEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHH---------------HHHTCCCSEEEEESSCCC
T ss_pred EeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhc---------------ccccCceeEEEcCCCccc
Confidence 999999999999998 8999999999999988 4442 1110 001257899999999887
Q ss_pred cccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCC--CCcccccccccccEEEccCCcCCCCCCc-
Q 038003 351 GEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVG--KIPVQLEMLSSLNKLILNLNQLSGGVPL- 427 (848)
Q Consensus 351 ~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~~~~l~~l~~L~~L~L~~N~l~~~~~~- 427 (848)
... .+..+++|+.|++++|++++.+|..++.+++|++|+|++|++++ .+|..+..+++|++|++++|.+++.+|.
T Consensus 316 ~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~ 393 (520)
T 2z7x_B 316 HML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKG 393 (520)
T ss_dssp CCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGC
T ss_pred ccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccc
Confidence 543 12688999999999999999899999999999999999999996 5667899999999999999999985665
Q ss_pred ccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCChhHHhhhcccceecccCcccCcCCCcc-ccCCCC
Q 038003 428 EFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQ-VCNMGS 506 (848)
Q Consensus 428 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~ 506 (848)
.+..+++|++|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++ +|.. +..+++
T Consensus 394 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~ 469 (520)
T 2z7x_B 394 DCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTS 469 (520)
T ss_dssp SCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTT
T ss_pred hhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCc
Confidence 488899999999999999988877765 79999999999999 678878899999999999999985 5554 999999
Q ss_pred CccccCCCCcccCCCc
Q 038003 507 LEKLNLSHNNLSDFIP 522 (848)
Q Consensus 507 L~~L~Ls~N~l~~~~~ 522 (848)
|++|++++|++++..+
T Consensus 470 L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 470 LQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CCEEECCSSCBCCCHH
T ss_pred ccEEECcCCCCcccCC
Confidence 9999999999988644
No 21
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.3e-46 Score=444.35 Aligned_cols=458 Identities=22% Similarity=0.241 Sum_probs=332.6
Q ss_pred CCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcC
Q 038003 80 HLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALC 159 (848)
Q Consensus 80 ~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 159 (848)
++++|||++|.+++..|.+|+++++|++|||++|+|+++.|.+|++|++|++|+|++|+|++..|..|+++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 56666666666665555566666666666666666666555566666666666666666665555556666666666666
Q ss_pred CCcCCCCCCCcccCccccceEEeecccccC-CCcccccccccccccccccccccccCcccccCCcccc----eeeccccC
Q 038003 160 HNNLHGSIPSSLGNLSNLAVLYLYKNSLSG-SIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLT----MMSLFNNS 234 (848)
Q Consensus 160 ~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~l~~n~ 234 (848)
+|++++..+..|+++++|++|+|++|++++ .+|..++.+++|++|+|++|++++..|..+..+.+++ .++++.|.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 666665444556666666666666666654 2455666666666666666666665565555444333 35555565
Q ss_pred CCCCCCCcccCccccccccccccccc------------------------------------------------------
Q 038003 235 LSGSIPPILGNLKSLSALGLHINQLN------------------------------------------------------ 260 (848)
Q Consensus 235 l~~~~p~~l~~l~~L~~L~l~~N~l~------------------------------------------------------ 260 (848)
++...+..+ ....+..+++.+|...
T Consensus 213 l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~ 291 (635)
T 4g8a_A 213 MNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 291 (635)
T ss_dssp CCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECC
T ss_pred ccccCcccc-cchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhh
Confidence 553222222 2222333333332111
Q ss_pred ----CcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCC---ccceeeccccCCCCcccccc
Q 038003 261 ----GFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPH---SIERVLLNQNNLSGKMYEAF 333 (848)
Q Consensus 261 ----~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~---~l~~l~L~~n~l~~~~~~~~ 333 (848)
...+..+..+.+++.+++.+|.+... ..+.....|+.|++.+|.+.+..+. .++.+.+..|.+.... .+
T Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~--~~ 367 (635)
T 4g8a_A 292 DYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAF--SE 367 (635)
T ss_dssp CSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBC--CC
T ss_pred cccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCc--cc
Confidence 01122234455666777777766543 2355667888888888888765443 4566677777765443 34
Q ss_pred CCCCCccEEEccCCccccc--cCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCc-cccccccc
Q 038003 334 GDHPNLTFLDLSNNNFCGE--ISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIP-VQLEMLSS 410 (848)
Q Consensus 334 ~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~ 410 (848)
..+++|+.|++++|.+... .+..+..+.+|+.+++..|.+.. .+..+..+++|+.++++.|......+ ..+..+++
T Consensus 368 ~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~ 446 (635)
T 4g8a_A 368 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN 446 (635)
T ss_dssp CBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTT
T ss_pred ccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccc
Confidence 5688999999999998643 44556678899999999998874 56678889999999999988875544 56789999
Q ss_pred ccEEEccCCcCCCCCCcccCCCCccCeEeccCccc-CCCCCCcccCccccceeccccCcCCCCChhHHhhhcccceeccc
Q 038003 411 LNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKL-SSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLS 489 (848)
Q Consensus 411 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 489 (848)
++.++++.|.+.+..+..+..+++|+.|++++|++ .+..|..|..+++|++|+|++|+|++.+|..|.++++|++|+|+
T Consensus 447 l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls 526 (635)
T 4g8a_A 447 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMS 526 (635)
T ss_dssp CCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred cccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECC
Confidence 99999999999999999999999999999999974 45688899999999999999999999999999999999999999
Q ss_pred CcccCcCCCccccCCCCCccccCCCCcccCCCcchhccc-cCceeecCCCCccCC
Q 038003 490 HNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEM-RSLSCIDISYNELHG 543 (848)
Q Consensus 490 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~l~ls~N~l~~ 543 (848)
+|+|++..|..|..+++|++|+|++|+|++..|..|..+ ++|+.|++++|+++.
T Consensus 527 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 527 HNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp TSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 999999989999999999999999999999999999998 689999999999975
No 22
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2e-47 Score=408.66 Aligned_cols=204 Identities=22% Similarity=0.360 Sum_probs=176.5
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||+||+|++ .+|+.||||++++... .....+.+.+|++++++++|||||++++++.+.+..|+
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yi 100 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM--SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYI 100 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC--CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence 36899999999999999999965 4799999999977643 23456789999999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||++||+|.++++.. ....+++.++..|+.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+...
T Consensus 101 VmEy~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 176 (350)
T 4b9d_A 101 VMDYCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176 (350)
T ss_dssp EEECCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred EEeCCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeec
Confidence 99999999999999654 234678899999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.........+||+.|||||++.+..|+.++||||+||++|||+||+.||..
T Consensus 177 ~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~ 227 (350)
T 4b9d_A 177 STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227 (350)
T ss_dssp HHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 433333557899999999999999999999999999999999999999864
No 23
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.1e-46 Score=439.71 Aligned_cols=458 Identities=20% Similarity=0.176 Sum_probs=364.0
Q ss_pred EEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecc
Q 038003 57 ISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDM 136 (848)
Q Consensus 57 ~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 136 (848)
..++++++++++ +|.. + .++|++|+|++|.+++..|.+|+++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 34 ~~l~ls~~~L~~-ip~~-~--~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKD-L--PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-CCTT-S--CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-CCCC-C--CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 557788888875 5542 2 28899999999999988888999999999999999999988899999999999999999
Q ss_pred cCcCCCCCccccCcCCccEEEcCCCcCCC-CCCCcccCccccceEEeecccccCCCcccccccccc--cccccccccc--
Q 038003 137 NQLHGTIPPEIGQLSLIDKLALCHNNLHG-SIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSL--LQLDLSENQF-- 211 (848)
Q Consensus 137 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l-- 211 (848)
|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++. .+..+++| ++|+|++|++
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 9998 67766 89999999999999986 4568899999999999999999863 45555555 9999999999
Q ss_pred cccCcccccCCc-ccceeeccccCCCCCCCC-cccCccccccccccccc-----ccCcCCCcccCCCCCceEEccCcccc
Q 038003 212 SGSIPLSLGNLS-SLTMMSLFNNSLSGSIPP-ILGNLKSLSALGLHINQ-----LNGFIPPSIGNLSSLRVLYLYNNGLY 284 (848)
Q Consensus 212 ~~~~p~~l~~l~-~L~~L~l~~n~l~~~~p~-~l~~l~~L~~L~l~~N~-----l~~~~p~~l~~l~~L~~L~Ls~N~l~ 284 (848)
++..|..+..+. ....+++++|.+.+.++. .+..+++|+.|++++|+ +.+.+ ..+..+++|+.|+++++.+.
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~-~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFL-SELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHH-HHHHSCSSCEEEEEEEEEEC
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHH-HHHhccCcceEEEecCCcCc
Confidence 888888888765 223668899998887665 56688999999999985 33322 35677888888888888776
Q ss_pred ccC----cccccCCCCCccccccccccccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccC-ccccC
Q 038003 285 GFV----PEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEIS-FNWGN 359 (848)
Q Consensus 285 ~~~----p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~ 359 (848)
+.. +..+ ...+|++|++++|.++|.+|..+-.. ....++.|+.++++.|.+ ..| ..+..
T Consensus 263 ~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~-------------~~~~L~~L~~~~~~~~~~--~~p~~~~~~ 326 (562)
T 3a79_B 263 WKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTY-------------SETALKSLMIEHVKNQVF--LFSKEALYS 326 (562)
T ss_dssp HHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCC-------------CSCSCCEEEEEEEEECCC--SSCHHHHHH
T ss_pred HHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhc-------------ccccchheehhhccccee--ecChhhhhh
Confidence 432 2222 23589999999999988877643110 124566777777777776 222 12221
Q ss_pred ---cccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCC--CcccCCCCc
Q 038003 360 ---FSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGV--PLEFGSLTK 434 (848)
Q Consensus 360 ---l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~ 434 (848)
..+|+.|++++|.+.... ....+++|++|++++|++++..|..+..+++|++|++++|++++.. |..|..+++
T Consensus 327 ~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~ 404 (562)
T 3a79_B 327 VFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSS 404 (562)
T ss_dssp HHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTT
T ss_pred hhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCC
Confidence 256899999999876322 1267889999999999999889999999999999999999998633 467899999
Q ss_pred cCeEeccCcccCCCCC-CcccCccccceeccccCcCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCC
Q 038003 435 LQYLDLSTNKLSSSIP-KSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLS 513 (848)
Q Consensus 435 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 513 (848)
|++|++++|++++.+| ..+..+++|++|+|++|++++.+|..+. ++|++|+|++|+|+ .+|..+..+++|++|+|+
T Consensus 405 L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~ 481 (562)
T 3a79_B 405 LETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVA 481 (562)
T ss_dssp CCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECC
T ss_pred CCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECC
Confidence 9999999999998444 4588899999999999999877666554 68999999999997 677777799999999999
Q ss_pred CCcccCCCcchhccccCceeecCCCCccCCCCC
Q 038003 514 HNNLSDFIPRCFEEMRSLSCIDISYNELHGPIP 546 (848)
Q Consensus 514 ~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 546 (848)
+|+|++..+..|..+++|+.+++++|++++..+
T Consensus 482 ~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 482 SNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp SSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 999997544459999999999999999987554
No 24
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7.8e-47 Score=403.48 Aligned_cols=198 Identities=30% Similarity=0.468 Sum_probs=180.8
Q ss_pred cCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
++|+..+.||+|+||+||+|.++ +|+.||||+++... ....+.+.+|++++++++|||||+++++|.+.+..|+|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~----~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv 149 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 149 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG----CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc----hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 56999999999999999999664 79999999997653 23345678999999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||++||+|.++++. ..+++..+..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 150 mEy~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 150 MEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp ECCCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 999999999999864 3589999999999999999999999 999999999999999999999999999998866
Q ss_pred CCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 758 HSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 758 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
........+||+.|||||++.+..|+.++||||+||++|||+||+.||..
T Consensus 223 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 272 (346)
T 4fih_A 223 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 272 (346)
T ss_dssp SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 55556778999999999999999999999999999999999999999853
No 25
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.1e-47 Score=400.38 Aligned_cols=202 Identities=23% Similarity=0.365 Sum_probs=182.4
Q ss_pred cCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
++|++.+.||+|+||+||+|+. .+++.||||++.+.... .....+.+.+|++++++++|||||+++++|++.+..|+|
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 5799999999999999999965 57999999999876433 234467789999999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||++||+|.++++.. +.+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+..
T Consensus 111 mEy~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp ECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 9999999999999754 5799999999999999999999999 999999999999999999999999999998754
Q ss_pred CC--CCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 758 HS--SNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 758 ~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||..
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 236 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 32 234567999999999999999999999999999999999999999864
No 26
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=8.8e-46 Score=405.13 Aligned_cols=198 Identities=30% Similarity=0.468 Sum_probs=181.0
Q ss_pred cCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
++|+..+.||+|+||+||+|.++ +|+.||||++.... ....+.+.+|+++|++++|||||+++++|.+.+.+|+|
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~----~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT----CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc----hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 56999999999999999999664 79999999997653 23345688999999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
||||+||+|.++++. ..+++..+..|+.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 227 mEy~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 227 MEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EECCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 999999999999854 3589999999999999999999999 999999999999999999999999999998876
Q ss_pred CCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 758 HSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 758 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
........+||+.|||||++.+..|+.++|||||||++|||+||+.||..
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 349 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 349 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 55566778999999999999999999999999999999999999999853
No 27
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3e-45 Score=427.46 Aligned_cols=437 Identities=21% Similarity=0.202 Sum_probs=358.5
Q ss_pred CceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEE
Q 038003 54 SRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLY 133 (848)
Q Consensus 54 ~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 133 (848)
.+++.|+++++.+.+.. +.+|..+++|++|+|++|.+++..|.+|+++++|++|||++|+++ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELR-MPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCC-GGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccccC-hhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 46889999999988654 447999999999999999999988999999999999999999999 56766 899999999
Q ss_pred ecccCcCC-CCCccccCcCCccEEEcCCCcCCCCCCCcccCcccc--ceEEeecccc--cCCCcccccccc-cccccccc
Q 038003 134 LDMNQLHG-TIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNL--AVLYLYKNSL--SGSIPSIIGKLK-SLLQLDLS 207 (848)
Q Consensus 134 L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L--~~L~l~~N~l--~~~~p~~~~~l~-~L~~L~L~ 207 (848)
|++|++++ .+|..|+.+++|++|+|++|++++. .+..+++| ++|++++|++ ++..|..+..+. ....++++
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~ 204 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFH 204 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEEC
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEec
Confidence 99999997 4578999999999999999999863 45566666 9999999999 888898888765 22366899
Q ss_pred cccccccCcc-cccCCcccceeeccccCC-----CCCCCCcccCcccccccccccccccCcC----CCcccCCCCCceEE
Q 038003 208 ENQFSGSIPL-SLGNLSSLTMMSLFNNSL-----SGSIPPILGNLKSLSALGLHINQLNGFI----PPSIGNLSSLRVLY 277 (848)
Q Consensus 208 ~N~l~~~~p~-~l~~l~~L~~L~l~~n~l-----~~~~p~~l~~l~~L~~L~l~~N~l~~~~----p~~l~~l~~L~~L~ 277 (848)
+|.+.+.++. .+..+++|+.|++++|+. .+ .+..+..+++|+.|+++++.+.+.. +..+ ..++|++|+
T Consensus 205 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~ 282 (562)
T 3a79_B 205 PNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLN 282 (562)
T ss_dssp SSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEE
T ss_pred CccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEE
Confidence 9999887665 567899999999999962 21 2235677888888888887765431 2222 235999999
Q ss_pred ccCccccccCcccc-----cCCCCCccccccccccccccCC-ccceeeccccCCCCccccccCCCCCccEEEccCCcccc
Q 038003 278 LYNNGLYGFVPEEI-----GYLKSLSELELCTNLLRGVIPH-SIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCG 351 (848)
Q Consensus 278 Ls~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p~-~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 351 (848)
+++|.+++.+|..+ ..++.|+.+++..|.+ .+|. .+. .+-...+|+.|++++|.+..
T Consensus 283 l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~---------------~~~~~~~L~~L~l~~n~~~~ 345 (562)
T 3a79_B 283 IYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALY---------------SVFAEMNIKMLSISDTPFIH 345 (562)
T ss_dssp EEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHH---------------HHHHTCCCSEEEEESSCCCC
T ss_pred EeccEeeccccchhhhcccccchheehhhccccee--ecChhhhh---------------hhhccCcceEEEccCCCccc
Confidence 99999999999887 6667777667666665 2331 110 01112578999999999864
Q ss_pred ccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCC--CcccccccccccEEEccCCcCCCCCC-cc
Q 038003 352 EISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGK--IPVQLEMLSSLNKLILNLNQLSGGVP-LE 428 (848)
Q Consensus 352 ~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~~~~l~~l~~L~~L~L~~N~l~~~~~-~~ 428 (848)
.. ....+++|+.|++++|++++.+|..++.+++|++|+|++|++++. +|..+..+++|+.|++++|++++.+| ..
T Consensus 346 ~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 423 (562)
T 3a79_B 346 MV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRT 423 (562)
T ss_dssp CC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCC
T ss_pred cc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhh
Confidence 32 126789999999999999998999999999999999999999964 35678999999999999999998444 45
Q ss_pred cCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCChhHHhhhcccceecccCcccCcCCCcc-ccCCCCC
Q 038003 429 FGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQ-VCNMGSL 507 (848)
Q Consensus 429 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L 507 (848)
+..+++|++|++++|++++..|..+. ++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++ +|.. +..+++|
T Consensus 424 ~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L 499 (562)
T 3a79_B 424 CAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSL 499 (562)
T ss_dssp CCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTC
T ss_pred hcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCC
Confidence 88999999999999999987777665 79999999999998 577766799999999999999985 5555 9999999
Q ss_pred ccccCCCCcccCCCc
Q 038003 508 EKLNLSHNNLSDFIP 522 (848)
Q Consensus 508 ~~L~Ls~N~l~~~~~ 522 (848)
+.|++++|++++..+
T Consensus 500 ~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 500 QYIWLHDNPWDCTCP 514 (562)
T ss_dssp CCEECCSCCBCCCHH
T ss_pred CEEEecCCCcCCCcc
Confidence 999999999987654
No 28
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.4e-46 Score=395.69 Aligned_cols=201 Identities=28% Similarity=0.365 Sum_probs=173.0
Q ss_pred cCCcccceeccCCceeEEEEEcC----CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCee
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELP----SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 674 (848)
++|++.+.||+|+||+||+|+.. +++.||||++++..... ....++.+|++++++++|||||++++++.+.+..
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV--RDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE--EECC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh--HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence 57999999999999999999652 57899999998764332 2234678899999999999999999999999999
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccc
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~ 754 (848)
|+||||++||+|.++++.. +.+++.++..++.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+.
T Consensus 102 ~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 9999999999999999754 5789999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 755 VGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 755 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
...........+||+.|||||++.+..|+.++||||+||++|||+||+.||..
T Consensus 176 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~ 228 (304)
T 3ubd_A 176 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC
Confidence 65555555678999999999999999999999999999999999999999864
No 29
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.2e-45 Score=383.20 Aligned_cols=200 Identities=24% Similarity=0.381 Sum_probs=163.4
Q ss_pred cCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
++|++.+.||+|+||+||+|... +++.||||++++.... .....+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcC-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 57999999999999999999764 7999999999876433 234467789999999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||+ +|+|.+++... +.+++..+..++.||+.||+|||++ ||+||||||+|||+++++.+||+|||+|+...+
T Consensus 92 mEy~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred EeCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 9999 67999988654 5699999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCcccccccccccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCcc
Q 038003 758 HSSNWTEFAGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 758 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
. ......+||+.|||||++.+..| ++++||||+||++|||+||+.||..
T Consensus 165 ~-~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~ 214 (275)
T 3hyh_A 165 G-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred C-CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC
Confidence 3 33456789999999999998876 5899999999999999999999864
No 30
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.9e-45 Score=393.89 Aligned_cols=295 Identities=31% Similarity=0.500 Sum_probs=275.6
Q ss_pred ChHHHHHHHHHHHhccCCCCCCcccCCCCCCCCCCCCCCCCc--cCceEEcCCC--CceEEEeccccCccc--cccCCcc
Q 038003 2 LNEEAYALLKWKTSLQNQNLNSSLLSSWTLYPANATKISPCS--WFGISCNHAG--SRVISITMSTLGLNG--TFHDFSF 75 (848)
Q Consensus 2 ~~~~~~all~~k~~~~~~~~~~~~l~sw~~~~~~~~~~~~c~--w~gv~C~~~~--~~v~~l~l~~~~l~g--~~~~~~~ 75 (848)
.++|++||++||+++.++ ..+++|. .+.|||. |.||+|+..+ ++|+.|+|+++++.| .+++ .+
T Consensus 4 ~~~~~~aL~~~k~~~~~~----~~l~~W~------~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l 72 (313)
T 1ogq_A 4 NPQDKQALLQIKKDLGNP----TTLSSWL------PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SL 72 (313)
T ss_dssp CHHHHHHHHHHHHHTTCC----GGGTTCC------TTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GG
T ss_pred CHHHHHHHHHHHHhcCCc----ccccCCC------CCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hH
Confidence 368999999999999643 3789996 2578998 9999998765 899999999999999 7775 79
Q ss_pred CCCCCCcEEeccC-CcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCcc
Q 038003 76 SSFPHLANLNLSF-NLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLID 154 (848)
Q Consensus 76 ~~l~~l~~L~l~~-n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 154 (848)
..+++|++|+|++ |.+.+.+|.+|+++++|++|+|++|++++.+|..|+++++|++|+|++|++++.+|..++.+++|+
T Consensus 73 ~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 152 (313)
T 1ogq_A 73 ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLV 152 (313)
T ss_dssp GGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCC
T ss_pred hCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCC
Confidence 9999999999995 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCcCCCCCCCcccCcc-ccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeecccc
Q 038003 155 KLALCHNNLHGSIPSSLGNLS-NLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNN 233 (848)
Q Consensus 155 ~L~L~~n~l~~~~p~~l~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n 233 (848)
+|+|++|++++.+|..+++++ +|++|++++|++++.+|..++.++ |++|+|++|++++.+|..+..+++|+.|++++|
T Consensus 153 ~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 231 (313)
T 1ogq_A 153 GITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN 231 (313)
T ss_dssp EEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSS
T ss_pred eEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCC
Confidence 999999999999999999998 999999999999999999999997 999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccc-cccc
Q 038003 234 SLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNL-LRGV 310 (848)
Q Consensus 234 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~ 310 (848)
++++.+|. +..+++|++|++++|++++.+|.++..+++|++|+|++|++++.+|.. ..+++|+.|++++|+ +.|.
T Consensus 232 ~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 232 SLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp EECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEEST
T ss_pred ceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCC
Confidence 99976665 888999999999999999999999999999999999999999999987 889999999999998 6654
No 31
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=7.4e-44 Score=422.80 Aligned_cols=487 Identities=25% Similarity=0.230 Sum_probs=389.4
Q ss_pred cccCCCCCCCCCCCCCCCCccC----ceEEcCC---------CCceEEEeccccCccccccCCccCCCCCCcEEeccCCc
Q 038003 24 SLLSSWTLYPANATKISPCSWF----GISCNHA---------GSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNL 90 (848)
Q Consensus 24 ~~l~sw~~~~~~~~~~~~c~w~----gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~ 90 (848)
..+++|.... ....++|.|. .|.|... ...++.|+|+++.+++ +++.+|.++++|++|||++|.
T Consensus 11 ~~~~~~~~~~--p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~-l~~~~f~~l~~L~~L~Ls~N~ 87 (635)
T 4g8a_A 11 DKLAAANSSI--PESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCE 87 (635)
T ss_dssp ----------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCC
T ss_pred chhhcccCCC--CCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCC-CCHHHHhCCCCCCEEECCCCc
Confidence 4567775321 1223567553 4678642 2368899999999875 566689999999999999999
Q ss_pred ccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCC-CCCC
Q 038003 91 FFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHG-SIPS 169 (848)
Q Consensus 91 ~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~ 169 (848)
+++..|.+|++|++|++|+|++|+|++..|..|+++++|++|+|++|++++..+..|+.+++|++|+|++|.+++ .+|.
T Consensus 88 i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~ 167 (635)
T 4g8a_A 88 IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 167 (635)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG
T ss_pred CCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCch
Confidence 998888899999999999999999998877889999999999999999998777789999999999999999986 4688
Q ss_pred cccCccccceEEeecccccCCCccccccccccc----ccccccccccccCcccccCCcccceeeccccCCCC--------
Q 038003 170 SLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLL----QLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSG-------- 237 (848)
Q Consensus 170 ~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~-------- 237 (848)
.++++++|++|++++|++++..|..|..+.+++ .++++.|.++...+..+ ....+..+++.+|..+.
T Consensus 168 ~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~ 246 (635)
T 4g8a_A 168 YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQ 246 (635)
T ss_dssp GGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHH
T ss_pred hhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhc
Confidence 899999999999999999988888888777655 57788888875443333 22334444444442210
Q ss_pred --------------------------------------------------CCCCcccCcccccccccccccccCcCCCcc
Q 038003 238 --------------------------------------------------SIPPILGNLKSLSALGLHINQLNGFIPPSI 267 (848)
Q Consensus 238 --------------------------------------------------~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l 267 (848)
.++..+..+.+++.+++..|.+.... .+
T Consensus 247 ~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~ 324 (635)
T 4g8a_A 247 GLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DF 324 (635)
T ss_dssp TTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GG
T ss_pred CCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--cc
Confidence 01122334456677777777776543 35
Q ss_pred cCCCCCceEEccCccccccCcccccCCCCCccccccccccccccC----CccceeeccccCCCCcc--ccccCCCCCccE
Q 038003 268 GNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIP----HSIERVLLNQNNLSGKM--YEAFGDHPNLTF 341 (848)
Q Consensus 268 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~l~L~~n~l~~~~--~~~~~~l~~L~~ 341 (848)
.....|+.|++++|.+.+..+. .+..|+.+++..|.+...++ +.++.+.+.+|.+.... ...+..+.+|+.
T Consensus 325 ~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~ 401 (635)
T 4g8a_A 325 SYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKY 401 (635)
T ss_dssp GSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCE
T ss_pred ccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhh
Confidence 6677899999999998765443 45678888888888765533 36788888888886533 344557789999
Q ss_pred EEccCCccccccCccccCcccccEeecccccccCCCC-CCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCc
Q 038003 342 LDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIP-PDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQ 420 (848)
Q Consensus 342 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~ 420 (848)
|+++.|.+... +..+..+++|+.+++..|+.....+ ..+..+++++.++++.|.+.+..+..+..+++|+.|++++|.
T Consensus 402 L~~~~~~~~~~-~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~ 480 (635)
T 4g8a_A 402 LDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 480 (635)
T ss_dssp EECCSCSEEEE-CSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCE
T ss_pred hhccccccccc-cccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcc
Confidence 99999998754 4567889999999999888776554 457889999999999999999999999999999999999998
Q ss_pred C-CCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCChhHHhhhcccceecccCcccCcCCCc
Q 038003 421 L-SGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPP 499 (848)
Q Consensus 421 l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 499 (848)
+ .+..|..|..+++|++|+|++|+|++..|..|+++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|.
T Consensus 481 ~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 560 (635)
T 4g8a_A 481 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ 560 (635)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSS
T ss_pred cccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHH
Confidence 5 456788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCC-CCCccccCCCCcccCC
Q 038003 500 QVCNM-GSLEKLNLSHNNLSDF 520 (848)
Q Consensus 500 ~~~~l-~~L~~L~Ls~N~l~~~ 520 (848)
.+..+ ++|++|+|++|+++..
T Consensus 561 ~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 561 ELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CTTCCCTTCCEEECTTCCBCCS
T ss_pred HHHhhhCcCCEEEeeCCCCccc
Confidence 99988 6899999999999864
No 32
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.2e-45 Score=393.36 Aligned_cols=195 Identities=26% Similarity=0.372 Sum_probs=171.9
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|+..+.||+|+||+||+|++ .+|+.||||+++.+.. ..+|++++++++|||||++++++.+++..|+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45688889999999999999976 4799999999976532 1469999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC-CEEEeeccCcccc
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIAKFV 755 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~kl~DfG~~~~~ 755 (848)
||||++||+|.++++.. +.+++..+..|+.||+.||+|||++ +||||||||+|||++.+| .+||+|||+|+..
T Consensus 128 vmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~ 201 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL 201 (336)
T ss_dssp EECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred EEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence 99999999999999754 5699999999999999999999999 999999999999999988 6999999999987
Q ss_pred CCCCC-----CcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 756 GPHSS-----NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 756 ~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
..... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||..
T Consensus 202 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~ 258 (336)
T 4g3f_A 202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 258 (336)
T ss_dssp ------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred cCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence 54322 12346899999999999999999999999999999999999999864
No 33
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=6.1e-45 Score=381.45 Aligned_cols=195 Identities=26% Similarity=0.356 Sum_probs=170.5
Q ss_pred cccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeec----CCeeEE
Q 038003 602 DEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYN----GPHSFL 676 (848)
Q Consensus 602 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~----~~~~~l 676 (848)
.+.+.||+|+||+||+|.+. ++..||+|++..... .....+.+.+|++++++++|||||+++++|.+ .+..|+
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 56678999999999999654 789999999976542 23456779999999999999999999999865 346799
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEcCCCCCCeeeCC-CCCEEEeeccCcc
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS--IIHRDISSKNVLLDS-NFEAHVSDFGIAK 753 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~--ivH~Dlk~~NIll~~-~~~~kl~DfG~~~ 753 (848)
||||++||+|.++++.. ..+++..+..|+.||+.||+|||++ + ||||||||+|||++. ++.+||+|||+|+
T Consensus 107 vmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 99999999999999754 5789999999999999999999998 7 999999999999984 7999999999998
Q ss_pred ccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 754 FVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 754 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.... ......+||+.|||||++.+ +|++++|||||||++|||+||+.||..
T Consensus 181 ~~~~--~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~ 231 (290)
T 3fpq_A 181 LKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp GCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eCCC--CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 6533 33456799999999999875 699999999999999999999999853
No 34
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2e-45 Score=387.88 Aligned_cols=200 Identities=28% Similarity=0.448 Sum_probs=170.0
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
.+++++.+.||+|+||+||+|++++ .||||+++... ......+.|.+|++++++++|||||++++++.+ +..++|
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~--~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iV 109 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEE
Confidence 4678889999999999999998753 59999987542 234556789999999999999999999998865 568999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||+++|+|.++++.. ...+++.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+....
T Consensus 110 mEy~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 110 TQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEcCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 9999999999999754 25699999999999999999999999 999999999999999999999999999987653
Q ss_pred CC--CCcccccccccccCcccccc---CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 758 HS--SNWTEFAGTFGYAAPEIAYT---MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 758 ~~--~~~~~~~g~~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.. ......+||+.|||||++.+ ..|+.++|||||||++|||+||+.||..
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~ 239 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH 239 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCC
Confidence 22 22345789999999999864 3589999999999999999999999864
No 35
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=8.1e-46 Score=391.19 Aligned_cols=203 Identities=26% Similarity=0.449 Sum_probs=176.3
Q ss_pred cCCcccceeccCCceeEEEEEcC------CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELP------SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 672 (848)
++|.+.+.||+|+||+||+|++. ++..||||+++.. .....++|.+|++++++++|||||+++|+|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC----ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence 56888999999999999999764 4778999998754 3455678999999999999999999999999999
Q ss_pred eeEEEEeccCCCCHHhHhcCCC----------CcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC
Q 038003 673 HSFLVCEYLDRGSLARILGDDV----------TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF 742 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 742 (848)
..++||||+++|+|.++++... ....+++.++..|+.|||+||+|||++ +||||||||+|||+++++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCC
Confidence 9999999999999999996531 235799999999999999999999999 999999999999999999
Q ss_pred CEEEeeccCccccCCCCCCc--ccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 743 EAHVSDFGIAKFVGPHSSNW--TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 743 ~~kl~DfG~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
.+||+|||+|+......... ....||+.|||||++.+..|++++|||||||++|||+| |+.||...
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~ 234 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 234 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999998764433221 23568999999999999999999999999999999999 99998643
No 36
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.3e-45 Score=391.99 Aligned_cols=202 Identities=27% Similarity=0.465 Sum_probs=171.0
Q ss_pred cCCcccceeccCCceeEEEEEcC------CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELP------SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 672 (848)
++|.+.+.||+|+||+||+|+++ ++..||||+++.. .....++|.+|++++++++|||||+++|+|.+.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence 56788899999999999999764 4788999999754 3455678999999999999999999999999999
Q ss_pred eeEEEEeccCCCCHHhHhcCCC------------CcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC
Q 038003 673 HSFLVCEYLDRGSLARILGDDV------------TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS 740 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~------------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~ 740 (848)
..++||||+++|+|.++++... ....+++.++..|+.|||+||+|||++ +||||||||+|||+++
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEET
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECC
Confidence 9999999999999999987542 234689999999999999999999999 9999999999999999
Q ss_pred CCCEEEeeccCccccCCCCC--CcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 741 NFEAHVSDFGIAKFVGPHSS--NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 741 ~~~~kl~DfG~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
++.+||+|||+|+....... .....+||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~ 263 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 263 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCC
Confidence 99999999999987644322 2234679999999999999999999999999999999999 9999864
No 37
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.9e-45 Score=388.62 Aligned_cols=203 Identities=22% Similarity=0.326 Sum_probs=175.9
Q ss_pred cCCcccceeccCCceeEEEEEcC------CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELP------SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 672 (848)
.++++.+.||+|+||+||+|.+. +++.||||+++... .....++|.+|+.++++++|||||+++|+|.+.+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA---EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C---CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc---ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence 34677889999999999999763 46789999997653 3345678999999999999999999999999999
Q ss_pred eeEEEEeccCCCCHHhHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeC
Q 038003 673 HSFLVCEYLDRGSLARILGDDV-------------TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD 739 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~ 739 (848)
..++||||+++|+|.++++... ....+++.++..|+.|||+||+|||++ +||||||||+|||++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVY 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEEC
Confidence 9999999999999999996431 124689999999999999999999999 999999999999999
Q ss_pred CCCCEEEeeccCccccCCCC--CCcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 740 SNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 740 ~~~~~kl~DfG~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
+++.+||+|||+|+...... ......+||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~ 250 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 250 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCC
Confidence 99999999999998764322 22345679999999999999999999999999999999999 8999864
No 38
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.6e-44 Score=405.71 Aligned_cols=386 Identities=25% Similarity=0.299 Sum_probs=217.5
Q ss_pred CCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccc-------------cEEEecccCcCCCC
Q 038003 77 SFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQL-------------RRLYLDMNQLHGTI 143 (848)
Q Consensus 77 ~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L-------------~~L~L~~n~l~~~~ 143 (848)
+.++|++|++++|.+ |.+|.+|++|++|++|++++|.++|.+|.+++++++| ++|++++|.+++ +
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-l 86 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-L 86 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-C
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-C
Confidence 457889999999999 8999999999999999999999999999999988876 666666666663 3
Q ss_pred CccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCc
Q 038003 144 PPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLS 223 (848)
Q Consensus 144 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 223 (848)
|.. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +| .+++++
T Consensus 87 p~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~ 153 (454)
T 1jl5_A 87 PEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSS 153 (454)
T ss_dssp CSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCT
T ss_pred CCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCC
Confidence 331 2456666666666664 5543 2556666666666663 2221 1456666666666664 55 466666
Q ss_pred ccceeeccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCcccccc
Q 038003 224 SLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELC 303 (848)
Q Consensus 224 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 303 (848)
+|++|++++|++++ +|..+ .+|++|++++|++++ +| .++++++|++|++++|.+++ +|... ++|++|+++
T Consensus 154 ~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~ 223 (454)
T 1jl5_A 154 FLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAG 223 (454)
T ss_dssp TCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECC
T ss_pred CCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECc
Confidence 66666666666663 44332 356666666666655 33 35666666666666666654 23221 345555555
Q ss_pred ccccccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCC
Q 038003 304 TNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGN 383 (848)
Q Consensus 304 ~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~ 383 (848)
+|.++ .++ .++.+++|++|++++|++++... .+++|+.|++++|++++ +|..
T Consensus 224 ~n~l~------------------~lp--~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~N~l~~-l~~~--- 275 (454)
T 1jl5_A 224 NNILE------------------ELP--ELQNLPFLTTIYADNNLLKTLPD----LPPSLEALNVRDNYLTD-LPEL--- 275 (454)
T ss_dssp SSCCS------------------SCC--CCTTCTTCCEEECCSSCCSSCCS----CCTTCCEEECCSSCCSC-CCCC---
T ss_pred CCcCC------------------ccc--ccCCCCCCCEEECCCCcCCcccc----cccccCEEECCCCcccc-cCcc---
Confidence 55444 332 26677888888888888876332 24778888888888875 4543
Q ss_pred CCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCC-CccCeEeccCcccCCCCCCcccCcccccee
Q 038003 384 SPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSL-TKLQYLDLSTNKLSSSIPKSIGNLLKLHYL 462 (848)
Q Consensus 384 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 462 (848)
.++|++|++++|++++. |.. .++|+.|++++|++++ ++ .+ ++|++|++++|++++ +|.. +++|++|
T Consensus 276 ~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L 342 (454)
T 1jl5_A 276 PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERL 342 (454)
T ss_dssp CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEE
T ss_pred cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEE
Confidence 36788888888888752 211 2578888888888874 22 22 478888888888885 4543 4778888
Q ss_pred ccccCcCCCCChhHHhhhcccceecccCcccCc--CCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCc
Q 038003 463 NLSNNQLSHKIPTEFEKLIHLSELDLSHNILQE--EIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNE 540 (848)
Q Consensus 463 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~ 540 (848)
++++|++++ +|. .+++|++|++++|++++ .+|..+..+ +.|.+.+.+|.. +++|+.|++++|+
T Consensus 343 ~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~~~---~~~L~~L~ls~N~ 407 (454)
T 1jl5_A 343 IASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEVPEL---PQNLKQLHVETNP 407 (454)
T ss_dssp ECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC------------------------
T ss_pred ECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcccccccccc---cCcCCEEECCCCc
Confidence 888888874 454 46778888888888877 566666554 123333333321 2455555555555
Q ss_pred cCC
Q 038003 541 LHG 543 (848)
Q Consensus 541 l~~ 543 (848)
+++
T Consensus 408 l~~ 410 (454)
T 1jl5_A 408 LRE 410 (454)
T ss_dssp ---
T ss_pred CCc
Confidence 554
No 39
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.4e-43 Score=402.83 Aligned_cols=364 Identities=22% Similarity=0.221 Sum_probs=243.8
Q ss_pred CCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCC-chhhhccccccEEEecccCcCCCCCccccCcCCccEEE
Q 038003 79 PHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLI-PPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLA 157 (848)
Q Consensus 79 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 157 (848)
++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|+.+++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 68999999999999888889999999999999999987655 56789999999999999999988888999999999999
Q ss_pred cCCCcCCCCCCCc--ccCccccceEEeecccccCCCccc-ccccccccccccccccccccCcccccCC--cccceeeccc
Q 038003 158 LCHNNLHGSIPSS--LGNLSNLAVLYLYKNSLSGSIPSI-IGKLKSLLQLDLSENQFSGSIPLSLGNL--SSLTMMSLFN 232 (848)
Q Consensus 158 L~~n~l~~~~p~~--l~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~l~~ 232 (848)
|++|++++.+|.. ++++++|++|+|++|++++..|.. ++++++|++|+|++|++++..|..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999998755554 888999999999999998777765 7888999999999999988888887766 6788888888
Q ss_pred cCCCCCCCCcc--------cCcccccccccccccccCcCCCcccCC---CCCceEEccCccccccCcccccCCCCCcccc
Q 038003 233 NSLSGSIPPIL--------GNLKSLSALGLHINQLNGFIPPSIGNL---SSLRVLYLYNNGLYGFVPEEIGYLKSLSELE 301 (848)
Q Consensus 233 n~l~~~~p~~l--------~~l~~L~~L~l~~N~l~~~~p~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 301 (848)
|.+.+..+..+ ..+++|++|++++|++++..|..+... ++|+.|++++|.+.+...
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~------------- 256 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF------------- 256 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT-------------
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc-------------
Confidence 88886544332 244556666666666655555544332 555556655555433210
Q ss_pred ccccccccccCCccceeeccccCCCCccccccC--CCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCC
Q 038003 302 LCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFG--DHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPP 379 (848)
Q Consensus 302 L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~ 379 (848)
..+.+. ......+. ..++|+.|++++|++++..+..+..+++|+.|++++|++.+..|.
T Consensus 257 -~~~~~~------------------~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 317 (455)
T 3v47_A 257 -GHTNFK------------------DPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDN 317 (455)
T ss_dssp -TCCSSC------------------CCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT
T ss_pred -chhhhc------------------cCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChh
Confidence 001111 11111111 124667777777777666555555555555555555555555555
Q ss_pred CCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCcccc
Q 038003 380 DIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKL 459 (848)
Q Consensus 380 ~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 459 (848)
.|+.+++|++|+|++|++++..+..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|
T Consensus 318 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 397 (455)
T 3v47_A 318 AFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSL 397 (455)
T ss_dssp TTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred HhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcc
Confidence 55555555555555555555555555555555555555555555555555555555555555555554444445555555
Q ss_pred ceeccccCcCCCCCh
Q 038003 460 HYLNLSNNQLSHKIP 474 (848)
Q Consensus 460 ~~L~Ls~N~l~~~~p 474 (848)
++|+|++|++++..|
T Consensus 398 ~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 398 QKIWLHTNPWDCSCP 412 (455)
T ss_dssp CEEECCSSCBCCCTT
T ss_pred cEEEccCCCcccCCC
Confidence 555555555554443
No 40
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.7e-43 Score=401.97 Aligned_cols=393 Identities=22% Similarity=0.196 Sum_probs=253.1
Q ss_pred cEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCC-CccccCcCCccEEEcCC
Q 038003 82 ANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTI-PPEIGQLSLIDKLALCH 160 (848)
Q Consensus 82 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~ 160 (848)
+.++.+++.++ .+|. + .++|++|||++|.+++..|..|+++++|++|+|++|.+.+.+ |..|..+++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 45677777775 5665 3 277888888888888777888888888888888888887555 45677777788888888
Q ss_pred CcCCCCCCCcccCccccceEEeecccccCCCccc--ccccccccccccccccccccCccc-ccCCcccceeeccccCCCC
Q 038003 161 NNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSI--IGKLKSLLQLDLSENQFSGSIPLS-LGNLSSLTMMSLFNNSLSG 237 (848)
Q Consensus 161 n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~l~~n~l~~ 237 (848)
|++++..|..|+++++|++|++++|++++.+|.. |+.+++|++|+|++|++++..|.. +..+++|++|++++|++++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 8777666777777777777777777777644443 667777777777777777665654 5666666666666666666
Q ss_pred CCCCcccCc--ccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCcc
Q 038003 238 SIPPILGNL--KSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSI 315 (848)
Q Consensus 238 ~~p~~l~~l--~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 315 (848)
..|..+..+ .+|+.|++++|.+.+..+..+.. .....+..+++|+.|++++|.+.+.+|..+
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 232 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRF 232 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHH
T ss_pred cChhhhhccccccccccccccCcccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhh
Confidence 555555544 44555555555554433222110 000001122233333333333332222111
Q ss_pred ceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCC
Q 038003 316 ERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSN 395 (848)
Q Consensus 316 ~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N 395 (848)
. .....++|+.|++++|.+.+.. +..+
T Consensus 233 ~---------------~~~~~~~L~~L~l~~~~~~~~~--------------------------------------~~~~ 259 (455)
T 3v47_A 233 F---------------DAIAGTKIQSLILSNSYNMGSS--------------------------------------FGHT 259 (455)
T ss_dssp H---------------HHTTTCCEEEEECTTCTTTSCC--------------------------------------TTCC
T ss_pred h---------------ccccccceeeEeeccccccccc--------------------------------------cchh
Confidence 0 0011245555555555543211 0111
Q ss_pred ccCCCCcccccc--cccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCC
Q 038003 396 HIVGKIPVQLEM--LSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKI 473 (848)
Q Consensus 396 ~l~~~~~~~l~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 473 (848)
.+.+..+..+.. .++|+.|++++|.+++..|..|+.+++|++|+|++|++++..|..|+++++|++|+|++|++++..
T Consensus 260 ~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 339 (455)
T 3v47_A 260 NFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSID 339 (455)
T ss_dssp SSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred hhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcC
Confidence 122122222222 256777777777777667777777777777777777777777777777888888888888887777
Q ss_pred hhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccCCCCCC
Q 038003 474 PTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIPN 547 (848)
Q Consensus 474 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~ 547 (848)
|..|.++++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|++++|++++..|.
T Consensus 340 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 340 SRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp GGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred hhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 77788888888888888888777777888888888888888888877777778888888888888888887774
No 41
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.3e-43 Score=375.19 Aligned_cols=200 Identities=23% Similarity=0.404 Sum_probs=165.3
Q ss_pred cCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC-----
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP----- 672 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----- 672 (848)
.+|++.+.||+|+||+||+|+++ +++.||||+++... .....+.+.+|++++++++|||||+++++|.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence 46999999999999999999654 79999999987542 3345677899999999999999999999987544
Q ss_pred -------eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEE
Q 038003 673 -------HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAH 745 (848)
Q Consensus 673 -------~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 745 (848)
..|+||||+++|+|.++++........++..+..|+.||+.||+|||++ |||||||||+|||++.++.+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEE
Confidence 3689999999999999998765555677788899999999999999999 999999999999999999999
Q ss_pred EeeccCccccCCCCC------------CcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 746 VSDFGIAKFVGPHSS------------NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 746 l~DfG~~~~~~~~~~------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
|+|||+|+....... ..+..+||+.|||||++.+..|+.++|||||||++|||++ ||..
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~ 229 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST 229 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC
Confidence 999999987754322 1234679999999999999999999999999999999996 7643
No 42
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=4.3e-42 Score=387.55 Aligned_cols=406 Identities=25% Similarity=0.277 Sum_probs=275.3
Q ss_pred CceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCC-------------cEEEccccCCCCCCc
Q 038003 54 SRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKL-------------QYLDLGSNQLSGLIP 120 (848)
Q Consensus 54 ~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L-------------~~L~Ls~n~l~~~~p 120 (848)
.++..+.++++.+ |.+|+ +++++++|++|++++|.+.|.+|.+++++++| ++|++++|++++ +|
T Consensus 11 ~~L~~L~l~~n~l-~~iP~-~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPV-EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred ccchhhhcccCch-hhCCh-hHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 3677888999999 89986 59999999999999999999999999999875 999999999996 45
Q ss_pred hhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCccccccccc
Q 038003 121 PEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKS 200 (848)
Q Consensus 121 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 200 (848)
.. .++|++|++++|++++ +|.. +++|++|++++|++++ +|... ++|++|++++|++++ +| .|+++++
T Consensus 88 ~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~~---~~L~~L~L~~n~l~~-lp-~~~~l~~ 154 (454)
T 1jl5_A 88 EL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDLP---PLLEYLGVSNNQLEK-LP-ELQNSSF 154 (454)
T ss_dssp SC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSCC---TTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred CC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCCC---CCCCEEECcCCCCCC-Cc-ccCCCCC
Confidence 42 4789999999999997 7754 4889999999999995 44422 689999999999996 77 5999999
Q ss_pred ccccccccccccccCcccccCCcccceeeccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccC
Q 038003 201 LLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYN 280 (848)
Q Consensus 201 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~ 280 (848)
|++|++++|++++ +|..+ ++|++|++++|++++ +| .++.+++|++|++++|++++ +|.. .++|++|++++
T Consensus 155 L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~ 224 (454)
T 1jl5_A 155 LKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGN 224 (454)
T ss_dssp CCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCS
T ss_pred CCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcC
Confidence 9999999999995 67554 589999999999996 66 69999999999999999997 4543 25899999999
Q ss_pred ccccccCcccccCCCCCccccccccccccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCc
Q 038003 281 NGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNF 360 (848)
Q Consensus 281 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 360 (848)
|.+. .+| .++.+++|++|++++|++++. |. ..++|+.|++++|++++.. . ..
T Consensus 225 n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l-~~---------------------~~~~L~~L~l~~N~l~~l~-~---~~ 276 (454)
T 1jl5_A 225 NILE-ELP-ELQNLPFLTTIYADNNLLKTL-PD---------------------LPPSLEALNVRDNYLTDLP-E---LP 276 (454)
T ss_dssp SCCS-SCC-CCTTCTTCCEEECCSSCCSSC-CS---------------------CCTTCCEEECCSSCCSCCC-C---CC
T ss_pred CcCC-ccc-ccCCCCCCCEEECCCCcCCcc-cc---------------------cccccCEEECCCCcccccC-c---cc
Confidence 9998 566 489999999999999999863 32 1257888888888887632 2 23
Q ss_pred ccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCccccccc-ccccEEEccCCcCCCCCCcccCCCCccCeEe
Q 038003 361 SKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEML-SSLNKLILNLNQLSGGVPLEFGSLTKLQYLD 439 (848)
Q Consensus 361 ~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 439 (848)
++|+.|++++|++++. |.. .++|+.|++++|++++ ++ .+ ++|+.|++++|++++ +|.. +++|++|+
T Consensus 277 ~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~ 343 (454)
T 1jl5_A 277 QSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLI 343 (454)
T ss_dssp TTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEE
T ss_pred CcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEE
Confidence 7788888888888752 221 2688999999999985 22 23 589999999999986 5544 57899999
Q ss_pred ccCcccCCCCCCcccCccccceeccccCcCCC--CChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcc
Q 038003 440 LSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSH--KIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNL 517 (848)
Q Consensus 440 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 517 (848)
+++|++++ +|. .+++|++|++++|++++ .+|.++.. |+.|.+.+.+|.. +++|++|++++|++
T Consensus 344 L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l 408 (454)
T 1jl5_A 344 ASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPL 408 (454)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-------------------------
T ss_pred CCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcC
Confidence 99999984 565 47889999999999998 56765543 3456777777763 57899999999999
Q ss_pred cC--CCcchhccccCceeecCCCCccCCCCCC
Q 038003 518 SD--FIPRCFEEMRSLSCIDISYNELHGPIPN 547 (848)
Q Consensus 518 ~~--~~~~~~~~l~~L~~l~ls~N~l~~~~~~ 547 (848)
++ .+|. +++.+.+.+|.+.+++|.
T Consensus 409 ~~~~~iP~------sl~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 409 REFPDIPE------SVEDLRMNSERVVDPYEF 434 (454)
T ss_dssp --------------------------------
T ss_pred Cccccchh------hHhheeCcCcccCCcccc
Confidence 87 4553 356677888888887764
No 43
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.3e-43 Score=378.54 Aligned_cols=207 Identities=26% Similarity=0.365 Sum_probs=177.0
Q ss_pred HhhcCCcccceeccCCceeEEEEEcCC------CCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCC-CcccceEEEe
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAELPS------GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH-RNNVKFHGFC 668 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~l~~~~ 668 (848)
...++|++.+.||+|+||+||+|.+.. ++.||||+++... .....+++.+|++++++++| ||||+++|+|
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~---~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~ 137 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGAC 137 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc---ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEE
Confidence 345789999999999999999997542 3579999987653 33456779999999999965 9999999998
Q ss_pred ecC-CeeEEEEeccCCCCHHhHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCC
Q 038003 669 YNG-PHSFLVCEYLDRGSLARILGDDV-------------TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSK 734 (848)
Q Consensus 669 ~~~-~~~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~ 734 (848)
.+. +..++|||||++|+|.++++... ....+++.++..|+.|||+||+|||++ +||||||||+
T Consensus 138 ~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~ 214 (353)
T 4ase_A 138 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 214 (353)
T ss_dssp CCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred EecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCcc
Confidence 764 56899999999999999996431 124589999999999999999999999 9999999999
Q ss_pred CeeeCCCCCEEEeeccCccccCCCCCC--cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 735 NVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 735 NIll~~~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
|||+++++.+||+|||+|+........ ....+||+.|||||++.+..|+.++|||||||++|||+| |+.||...
T Consensus 215 NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 215 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp GEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999876543322 234678999999999999999999999999999999998 99998643
No 44
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.9e-42 Score=365.07 Aligned_cols=199 Identities=27% Similarity=0.367 Sum_probs=164.1
Q ss_pred cCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC----ee
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP----HS 674 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----~~ 674 (848)
++|.+.+.||+|+||+||+|++ +|+.||||+++... .......+|+..+.+++|||||+++++|.+.+ ..
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~ 76 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEE
Confidence 5688889999999999999987 58999999986542 11222345666677889999999999998654 57
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCC-----CCCeEEcCCCCCCeeeCCCCCEEEeec
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC-----LPSIIHRDISSKNVLLDSNFEAHVSDF 749 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~-----~~~ivH~Dlk~~NIll~~~~~~kl~Df 749 (848)
|+||||+++|+|.++++. ..+++..+.+++.|+|+||+|||+++ .++||||||||+|||++.++.+||+||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEecCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 999999999999999964 35899999999999999999999762 348999999999999999999999999
Q ss_pred cCccccCCCCCC----cccccccccccCccccccC------CCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 750 GIAKFVGPHSSN----WTEFAGTFGYAAPEIAYTM------RATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 750 G~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
|+|+........ ....+||+.|||||++.+. .+++++|||||||++|||+||+.||+.
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~ 220 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCc
Confidence 999877543322 2346799999999998754 467899999999999999999988754
No 45
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=372.01 Aligned_cols=200 Identities=25% Similarity=0.387 Sum_probs=173.3
Q ss_pred cCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeec------C
Q 038003 599 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYN------G 671 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------~ 671 (848)
++|++.+.||+|+||+||+|.+ .+|+.||||+++.... .....+.+.+|+++|+.++|||||++++++.. .
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD--VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc--chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 5799999999999999999965 4899999999976532 23456778899999999999999999998764 3
Q ss_pred CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccC
Q 038003 672 PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGI 751 (848)
Q Consensus 672 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 751 (848)
+..|+||||++ |+|.+++... +.+++..+..+++||+.||+|||++ |||||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~---~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSS---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 57899999996 5799998754 6799999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC----CCCcccccccccccCccccccCC-CCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 752 AKFVGPH----SSNWTEFAGTFGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 752 ~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
|+.+... .......+||+.|||||++.+.. ++.++||||+|||+|||+||+.||..
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g 265 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCC
Confidence 9876432 22335679999999999988754 69999999999999999999999853
No 46
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1e-41 Score=389.06 Aligned_cols=201 Identities=21% Similarity=0.287 Sum_probs=175.2
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHH---HHHHHHhcCCCCcccceEEEeecCCe
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFL---NEVLALKEIRHRNNVKFHGFCYNGPH 673 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~---~E~~~l~~l~hp~iv~l~~~~~~~~~ 673 (848)
.++|++.+.||+|+||+||+|+.+ +|+.||||++++...... .....+. .++.+++.++|||||+++++|++.+.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~-~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT-TCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchh-hhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 467999999999999999999654 799999999977643321 2223333 34667788899999999999999999
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
+|+||||++||+|.++++.. +.+++..+..++.||+.||+|||++ |||||||||+|||++.+|++||+|||+|+
T Consensus 267 lylVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 99999999999999999754 5689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCcccccccccccCccccc-cCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 754 FVGPHSSNWTEFAGTFGYAAPEIAY-TMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 754 ~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
..... ...+.+||+.|||||++. +..|+.++||||+||++|||+||+.||..
T Consensus 341 ~~~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~ 393 (689)
T 3v5w_A 341 DFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393 (689)
T ss_dssp ECSSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCG
T ss_pred ecCCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 87543 235679999999999996 45799999999999999999999999864
No 47
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=7.1e-41 Score=377.95 Aligned_cols=317 Identities=20% Similarity=0.207 Sum_probs=186.5
Q ss_pred ccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCc
Q 038003 74 SFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLI 153 (848)
Q Consensus 74 ~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 153 (848)
+++.+++|++|++++|.+++. | .++.+++|++|+|++|++++. | ++.+++|++|+|++|++++. | ++.+++|
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L 108 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKL 108 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTC
T ss_pred ChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcC
Confidence 355667777777777777653 4 577777777777777777753 3 67777777777777777753 3 6677777
Q ss_pred cEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeecccc
Q 038003 154 DKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNN 233 (848)
Q Consensus 154 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n 233 (848)
++|++++|++++ +| ++++++|++|++++|++++. + ++.+++|++|++++|+..+.+ .++.+++|++|++++|
T Consensus 109 ~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n 180 (457)
T 3bz5_A 109 TYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFN 180 (457)
T ss_dssp CEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCC
Confidence 777777777774 33 66777777777777777653 2 666677777777777554444 3666667777777777
Q ss_pred CCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCC
Q 038003 234 SLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPH 313 (848)
Q Consensus 234 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 313 (848)
++++ +| ++.+++|+.|++++|++++. .++.+++|++|++++|++++ +| +..+++|+.|++++|++++..+
T Consensus 181 ~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~- 250 (457)
T 3bz5_A 181 KITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV- 250 (457)
T ss_dssp CCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC-
T ss_pred ccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH-
Confidence 7764 33 56666677777777766654 25666666666666666665 33 5566666666666666654321
Q ss_pred ccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEcc
Q 038003 314 SIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLS 393 (848)
Q Consensus 314 ~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls 393 (848)
+.+++|+.|++++|+ |+.|++++|.+.+.+| ++.+++|+.|+++
T Consensus 251 --------------------~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls 294 (457)
T 3bz5_A 251 --------------------STLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVT 294 (457)
T ss_dssp --------------------TTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCT
T ss_pred --------------------HHCCCCCEEeccCCC--------------CCEEECCCCccCCccc--ccccccCCEEECC
Confidence 234455555555543 2344455555444443 3344555555555
Q ss_pred CCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCC
Q 038003 394 SNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSH 471 (848)
Q Consensus 394 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 471 (848)
+|.+.+.+|. ...+|+.|++++| ++|++|++++|+|++. .++.+++|+.|++++|+|++
T Consensus 295 ~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 295 HNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp TCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC---CCTTCTTCSEEECCSSCCCB
T ss_pred CCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc---ccccCCcCcEEECCCCCCCC
Confidence 5554444442 1222333322222 3455555555555542 14445555555555555543
No 48
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1e-40 Score=376.73 Aligned_cols=367 Identities=20% Similarity=0.206 Sum_probs=301.4
Q ss_pred CCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCC
Q 038003 88 FNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSI 167 (848)
Q Consensus 88 ~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 167 (848)
.....+..+..++++++|++|+|++|.+++. | .++.+++|++|+|++|++++. | ++.+++|++|+|++|++++ +
T Consensus 27 ~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~ 100 (457)
T 3bz5_A 27 AFEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-L 100 (457)
T ss_dssp HTTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-C
T ss_pred hcCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-e
Confidence 3445566677899999999999999999975 5 799999999999999999964 4 8999999999999999996 4
Q ss_pred CCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCCCCCcccCcc
Q 038003 168 PSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLK 247 (848)
Q Consensus 168 p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~ 247 (848)
| ++++++|++|++++|++++ +| ++.+++|++|++++|++++ ++ ++.+++|++|++++|+..+.+ .++.++
T Consensus 101 ~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~ 170 (457)
T 3bz5_A 101 D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQT 170 (457)
T ss_dssp C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCT
T ss_pred e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCC
Confidence 4 8899999999999999996 44 8899999999999999996 33 888999999999999766666 478889
Q ss_pred cccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCccceeeccccCCCC
Q 038003 248 SLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSG 327 (848)
Q Consensus 248 ~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~ 327 (848)
+|++|++++|++++. | +..+++|++|++++|.+++. .++.+++|+.|++++|++++. |
T Consensus 171 ~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--------------- 228 (457)
T 3bz5_A 171 QLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--------------- 228 (457)
T ss_dssp TCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C---------------
T ss_pred cCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C---------------
Confidence 999999999999874 4 78888999999999998875 377888888888888887752 2
Q ss_pred ccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCcccccc
Q 038003 328 KMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEM 407 (848)
Q Consensus 328 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~ 407 (848)
+..+++|+.|++++|++++.. ++.+++|+.|+++.| +|+.|++++|.+.+.+| +..
T Consensus 229 -----~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~ 284 (457)
T 3bz5_A 229 -----VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEG 284 (457)
T ss_dssp -----CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTT
T ss_pred -----ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccc
Confidence 346678888888888888753 455677777777655 35667888888777666 467
Q ss_pred cccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCChhHHhhhcccceec
Q 038003 408 LSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELD 487 (848)
Q Consensus 408 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 487 (848)
+++|+.|++++|.+.+.+|. ...+|+.|++++| ++|++|+|++|+|++. + +..+++|+.|+
T Consensus 285 l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~ 345 (457)
T 3bz5_A 285 CRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLS 345 (457)
T ss_dssp CTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEE
T ss_pred cccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEE
Confidence 78888888888887766664 3455666666555 6899999999999985 3 88999999999
Q ss_pred ccCcccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccCCCCCCC
Q 038003 488 LSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIPNS 548 (848)
Q Consensus 488 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~ 548 (848)
+++|+|++ ++.|+.|++++|.++|. ..+..|..++++.|+++|.+|..
T Consensus 346 l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 346 CVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp CCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred CCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 99999976 36788899999999985 35677888999999999999975
No 49
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.8e-41 Score=364.65 Aligned_cols=197 Identities=24% Similarity=0.328 Sum_probs=170.2
Q ss_pred HhhcCCcccceeccCCceeEEEEEcC----CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeec
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAELP----SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYN 670 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~ 670 (848)
...++|++.+.||+|+||+||+|..+ +++.||||++... ....++.+|+++++.+ +|||||+++++|.+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~------~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT------SHPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT------SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc------cCHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 34578999999999999999999643 5678999998654 2345678999999988 69999999999999
Q ss_pred CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCC-CCEEEeec
Q 038003 671 GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSN-FEAHVSDF 749 (848)
Q Consensus 671 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~kl~Df 749 (848)
.+..|+||||+++|+|.++++ .+++.++..+++||+.||+|||++ |||||||||+|||++.+ +.+||+||
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DF 162 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDF 162 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred CCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcC
Confidence 999999999999999999983 488899999999999999999999 99999999999999876 79999999
Q ss_pred cCccccCCCCC----------------------------CcccccccccccCccccccC-CCCccchhhhHHHHHHHHHh
Q 038003 750 GIAKFVGPHSS----------------------------NWTEFAGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIK 800 (848)
Q Consensus 750 G~~~~~~~~~~----------------------------~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwSlG~il~ellt 800 (848)
|+|+...+... .....+||+.|+|||++.+. .|+.++||||+|||+|||+|
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~ 242 (361)
T 4f9c_A 163 GLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242 (361)
T ss_dssp TTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHH
Confidence 99986543211 12345799999999999876 48999999999999999999
Q ss_pred CCCCCcc
Q 038003 801 GNHPRDF 807 (848)
Q Consensus 801 g~~P~~~ 807 (848)
|+.||..
T Consensus 243 G~~Pf~~ 249 (361)
T 4f9c_A 243 GRYPFYK 249 (361)
T ss_dssp TCSSSSC
T ss_pred CCCCCCC
Confidence 9999843
No 50
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.5e-39 Score=370.06 Aligned_cols=345 Identities=29% Similarity=0.440 Sum_probs=174.5
Q ss_pred CCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEE
Q 038003 78 FPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLA 157 (848)
Q Consensus 78 l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 157 (848)
+++++.|+++++.+.. +| .+..+++|++|||++|.+++..| ++++++|++|+|++|++++..| ++.+++|++|+
T Consensus 45 l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 4566666666666542 44 25566666666666666664432 6666666666666666664333 56666666666
Q ss_pred cCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCC
Q 038003 158 LCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSG 237 (848)
Q Consensus 158 L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~ 237 (848)
|++|.+++. |. ++++++|++|++++|.+++ ++ .++.+++|++|+++ |.+.+.. .+.++++|++|++++|.+++
T Consensus 119 L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 119 LFNNQITDI-DP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CCSSCCCCC-GG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCC-hH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCC
Confidence 666666532 22 5556666666666666553 22 25555555555554 3333221 14455555555555555442
Q ss_pred CCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCccce
Q 038003 238 SIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIER 317 (848)
Q Consensus 238 ~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 317 (848)
. .. +..+++|++|++++|.+.+..| ++.+++|+.|++++|.+++.
T Consensus 192 ~--~~------------------------l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~------- 236 (466)
T 1o6v_A 192 I--SV------------------------LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI------- 236 (466)
T ss_dssp C--GG------------------------GGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-------
T ss_pred C--hh------------------------hccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc-------
Confidence 1 12 3444444444444444443322 33344444444444443321
Q ss_pred eeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCcc
Q 038003 318 VLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHI 397 (848)
Q Consensus 318 l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l 397 (848)
..+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++
T Consensus 237 -------------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l 299 (466)
T 1o6v_A 237 -------------GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL 299 (466)
T ss_dssp -------------GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCC
T ss_pred -------------hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcc
Confidence 113334555555555555554332 3344444444444444443222 44555555555555555
Q ss_pred CCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCChhHH
Q 038003 398 VGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEF 477 (848)
Q Consensus 398 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 477 (848)
++..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++..| +
T Consensus 300 ~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 371 (466)
T 1o6v_A 300 EDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--L 371 (466)
T ss_dssp SCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--G
T ss_pred cCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--h
Confidence 54332 4455555555555555554433 44555555555555555543 244555555555555555554443 4
Q ss_pred hhhcccceecccCcccCc
Q 038003 478 EKLIHLSELDLSHNILQE 495 (848)
Q Consensus 478 ~~l~~L~~L~Ls~N~l~~ 495 (848)
..+++|+.|++++|++++
T Consensus 372 ~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 372 ANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp TTCTTCCEEECCCEEEEC
T ss_pred hcCCCCCEEeccCCcccC
Confidence 555555555555555543
No 51
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3.8e-39 Score=366.74 Aligned_cols=343 Identities=29% Similarity=0.447 Sum_probs=267.4
Q ss_pred ceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEe
Q 038003 55 RVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYL 134 (848)
Q Consensus 55 ~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 134 (848)
+++.|++.++++.. ++ .+..+++|++|+|++|.+++..| ++++++|++|+|++|++++..| ++++++|++|+|
T Consensus 47 ~l~~L~l~~~~i~~-l~--~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 47 QVTTLQADRLGIKS-ID--GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp TCCEEECCSSCCCC-CT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred cccEEecCCCCCcc-Cc--chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 57888888887764 44 37889999999999999986544 9999999999999999997654 999999999999
Q ss_pred cccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCccccccccccccccccccccccc
Q 038003 135 DMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGS 214 (848)
Q Consensus 135 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 214 (848)
++|++++. |. ++.+++|++|++++|.+++ +| .++++++|++|+++ |.+.+..+ ++.+++|++|++++|.+++.
T Consensus 120 ~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~~ 192 (466)
T 1o6v_A 120 FNNQITDI-DP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSDI 192 (466)
T ss_dssp CSSCCCCC-GG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCC-hH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCCCC
Confidence 99999965 43 9999999999999999995 44 48999999999997 56664433 89999999999999999853
Q ss_pred CcccccCCcccceeeccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCC
Q 038003 215 IPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYL 294 (848)
Q Consensus 215 ~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 294 (848)
..+..+++|++|++++|.+++..| ++.+++|+.|++++|++++. ..+..+++|++|++++|.+.+..+ +..+
T Consensus 193 --~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 264 (466)
T 1o6v_A 193 --SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGL 264 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred --hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcC
Confidence 358899999999999999997655 77788899999999988764 357778888888888888876543 6666
Q ss_pred CCCccccccccccccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeeccccccc
Q 038003 295 KSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNIS 374 (848)
Q Consensus 295 ~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~ 374 (848)
++|+.|++++|.+++..| +..+++|+.|++++|++++.
T Consensus 265 ~~L~~L~l~~n~l~~~~~--------------------~~~l~~L~~L~L~~n~l~~~---------------------- 302 (466)
T 1o6v_A 265 TKLTELKLGANQISNISP--------------------LAGLTALTNLELNENQLEDI---------------------- 302 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--------------------GTTCTTCSEEECCSSCCSCC----------------------
T ss_pred CCCCEEECCCCccCcccc--------------------ccCCCccCeEEcCCCcccCc----------------------
Confidence 666666666666554321 33455666666666655532
Q ss_pred CCCCCCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCccc
Q 038003 375 GSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIG 454 (848)
Q Consensus 375 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 454 (848)
.+ +..+++|+.|++++|++++..| +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..| +.
T Consensus 303 --~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~ 372 (466)
T 1o6v_A 303 --SP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LA 372 (466)
T ss_dssp --GG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GT
T ss_pred --hh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hh
Confidence 22 5566777777777777776555 66777777777777777754 357777888888888888877666 77
Q ss_pred CccccceeccccCcCCC
Q 038003 455 NLLKLHYLNLSNNQLSH 471 (848)
Q Consensus 455 ~l~~L~~L~Ls~N~l~~ 471 (848)
.+++|+.|++++|++++
T Consensus 373 ~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 373 NLTRITQLGLNDQAWTN 389 (466)
T ss_dssp TCTTCCEEECCCEEEEC
T ss_pred cCCCCCEEeccCCcccC
Confidence 78888888888888875
No 52
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=7.3e-40 Score=377.77 Aligned_cols=199 Identities=22% Similarity=0.400 Sum_probs=179.4
Q ss_pred cCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
++|++.+.||+|+||+||+|.. .+|+.||+|++... .....+.+.+|+++|+.++|||||+++++|.+.+..|+|
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~----~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP----HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc----chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 6799999999999999999965 47999999998764 234567788999999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCC--CCEEEeeccCcccc
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSN--FEAHVSDFGIAKFV 755 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~--~~~kl~DfG~~~~~ 755 (848)
|||++||+|.+++... ...+++.++..+++||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 233 ~E~~~gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 233 YEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp EECCCCCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred EeecCCCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 9999999999998644 24688999999999999999999999 99999999999999854 89999999999988
Q ss_pred CCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 756 GPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 756 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||..
T Consensus 308 ~~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~ 358 (573)
T 3uto_A 308 DPK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 358 (573)
T ss_dssp CTT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cCC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 653 334567899999999999999999999999999999999999999853
No 53
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.4e-38 Score=357.19 Aligned_cols=302 Identities=23% Similarity=0.165 Sum_probs=171.5
Q ss_pred CCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEc
Q 038003 79 PHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158 (848)
Q Consensus 79 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 158 (848)
++++.|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..|+.+++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 46677777777777666667777777777777777777666777777777777777777777544455666667777777
Q ss_pred CCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCC
Q 038003 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGS 238 (848)
Q Consensus 159 ~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ 238 (848)
++|++++..|..|.++++|++|++++|.+++..|..|+.+++|++|+|++|++++..+..+..+++|+.|++++|.+.+.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 77766666666666666666666666666655555666666666666666666644444555555555555555555544
Q ss_pred CCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCcccee
Q 038003 239 IPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERV 318 (848)
Q Consensus 239 ~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 318 (848)
.+..+..+++|+.|++++|.+.+.+|.......+|++|++++|.+++..+
T Consensus 192 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~------------------------------ 241 (477)
T 2id5_A 192 RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPY------------------------------ 241 (477)
T ss_dssp CTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCH------------------------------
T ss_pred ChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCH------------------------------
Confidence 44444444444444444444433333333333334444444443332221
Q ss_pred eccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccC
Q 038003 319 LLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIV 398 (848)
Q Consensus 319 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~ 398 (848)
..|..+++|+.|+|++|++++..+ ..|..+++|+.|+|++|+++
T Consensus 242 ------------~~~~~l~~L~~L~Ls~n~l~~~~~------------------------~~~~~l~~L~~L~L~~n~l~ 285 (477)
T 2id5_A 242 ------------LAVRHLVYLRFLNLSYNPISTIEG------------------------SMLHELLRLQEIQLVGGQLA 285 (477)
T ss_dssp ------------HHHTTCTTCCEEECCSSCCCEECT------------------------TSCTTCTTCCEEECCSSCCS
T ss_pred ------------HHhcCccccCeeECCCCcCCccCh------------------------hhccccccCCEEECCCCccc
Confidence 223344455555555555544333 33444444555555555555
Q ss_pred CCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccC
Q 038003 399 GKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLS 446 (848)
Q Consensus 399 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 446 (848)
+..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 286 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 286 VVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp EECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred eECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 444445555555555555555555444444555555555555555554
No 54
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=355.63 Aligned_cols=321 Identities=21% Similarity=0.206 Sum_probs=212.2
Q ss_pred cEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccc
Q 038003 130 RRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSEN 209 (848)
Q Consensus 130 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 209 (848)
+.++.++++++ .+|..+. +++++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 56777777776 5665543 46677777777777666666777777777777777777666666777777777777777
Q ss_pred cccccCcccccCCcccceeeccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcc
Q 038003 210 QFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPE 289 (848)
Q Consensus 210 ~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 289 (848)
++++..+..|.++++|++|+|++|++++..|..+..+++|++|++++|++.+..+..|.++++|++|+|++|.+++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 77644444566666666666666666655566666666666666666666666566666666666666666666654444
Q ss_pred cccCCCCCccccccccccccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecc
Q 038003 290 EIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVS 369 (848)
Q Consensus 290 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 369 (848)
.+..+++|+.|++++|.+ .+..+..|..+++|+.|+++
T Consensus 171 ~l~~l~~L~~L~l~~n~i------------------------------------------~~~~~~~~~~l~~L~~L~l~ 208 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNI------------------------------------------NAIRDYSFKRLYRLKVLEIS 208 (477)
T ss_dssp HHTTCTTCCEEEEESCCC------------------------------------------CEECTTCSCSCTTCCEEEEE
T ss_pred HhcccCCCcEEeCCCCcC------------------------------------------cEeChhhcccCcccceeeCC
Confidence 455555555555554444 44444444444444444554
Q ss_pred cccccCCCCCCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCC
Q 038003 370 MNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSI 449 (848)
Q Consensus 370 ~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 449 (848)
+|.+.+.+|..+....+|++|+|++|++++..+..+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..
T Consensus 209 ~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 288 (477)
T 2id5_A 209 HWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVE 288 (477)
T ss_dssp CCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEEC
T ss_pred CCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceEC
Confidence 44444445555555557777777777777555566777777777777777777666667777777777777777777777
Q ss_pred CCcccCccccceeccccCcCCCCChhHHhhhcccceecccCcccCc
Q 038003 450 PKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQE 495 (848)
Q Consensus 450 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 495 (848)
|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 289 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 289 PYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp TTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred HHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 7777777777777777777777666677777777777777777754
No 55
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.5e-37 Score=331.48 Aligned_cols=238 Identities=26% Similarity=0.388 Sum_probs=199.0
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 94 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG----CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc----ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEE
Confidence 46799999999999999999975 579999999987653 2345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++|+|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 95 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp EEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 99999999999998643 588899999999999999999999 99999999999999999999999999998877
Q ss_pred CCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcccccc----------------ccccchhhh
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSIN----------------FSSFSNMII 820 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~----------------~~~~~~~~~ 820 (848)
..........||+.|+|||++.+..+++++|||||||++|||+||+.||...... ...+...+.
T Consensus 168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (297)
T 3fxz_A 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR 247 (297)
T ss_dssp STTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHH
T ss_pred CcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHH
Confidence 6555556678999999999999999999999999999999999999998543211 112233334
Q ss_pred hhhhhcCCCCCCCCCCcccccceeec
Q 038003 821 DVNKILDPRLPTPSPSVMDYGGCHFM 846 (848)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (848)
++...+-..-|..||.+.+.....|+
T Consensus 248 ~li~~~l~~dp~~Rps~~ell~h~~~ 273 (297)
T 3fxz_A 248 DFLNRCLEMDVEKRGSAKELLQHQFL 273 (297)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCGGG
T ss_pred HHHHHHccCChhHCcCHHHHhhChhh
Confidence 44444444556667776666665554
No 56
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.1e-37 Score=337.61 Aligned_cols=203 Identities=25% Similarity=0.329 Sum_probs=181.6
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||+||+|+.+ +++.||+|++++.... .....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 82 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence 467999999999999999999665 7999999999775322 12345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++|+|.+++... ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 83 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 83 VMEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999999999988654 5688999999999999999999999 99999999999999999999999999998755
Q ss_pred CCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.........+||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 157 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 207 (337)
T 1o6l_A 157 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207 (337)
T ss_dssp CTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC
Confidence 444455667899999999999999999999999999999999999999854
No 57
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=6.7e-38 Score=341.51 Aligned_cols=205 Identities=27% Similarity=0.373 Sum_probs=175.6
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCCee
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~ 674 (848)
..++|++.+.||+|+||+||+|+.+ +++.||||++++.... .....+.+.+|.++++.+ +||||+++++++.+.+..
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~-~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL-QDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhc-chhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 4578999999999999999999764 7899999999775322 223456788999999988 799999999999999999
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccc
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~ 754 (848)
|+||||+++|+|.++++.. ..+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++.
T Consensus 100 ~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence 9999999999999998654 5689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 755 VGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 755 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
...........+||+.|+|||++.+..++.++||||+||++|||+||+.||...
T Consensus 174 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 227 (353)
T 3txo_A 174 GICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227 (353)
T ss_dssp SCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC
Confidence 554444556678999999999999989999999999999999999999998643
No 58
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.9e-37 Score=333.26 Aligned_cols=202 Identities=26% Similarity=0.421 Sum_probs=180.2
Q ss_pred hhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
...+|++.+.||+|+||.||+|.+ .+|+.||||++..... .....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 346799999999999999999976 5899999999976532 3345677889999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||||+++|+|.+++... ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++...
T Consensus 91 lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 164 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF 164 (328)
T ss_dssp EEECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGG
T ss_pred EEEECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceec
Confidence 999999999999998654 5688999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCcccccccccccCccccccCCCC-ccchhhhHHHHHHHHHhCCCCCcc
Q 038003 756 GPHSSNWTEFAGTFGYAAPEIAYTMRAT-EKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 756 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~~P~~~ 807 (848)
... ......+||+.|+|||++.+..+. +++||||+||++|||+||+.||..
T Consensus 165 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 216 (328)
T 3fe3_A 165 TVG-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216 (328)
T ss_dssp SSS-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCC-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence 543 334567899999999999888764 789999999999999999999864
No 59
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.3e-37 Score=343.06 Aligned_cols=204 Identities=29% Similarity=0.394 Sum_probs=179.9
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCCee
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~ 674 (848)
..++|++.+.||+|+||+||+|+.+ +++.||+|++++.... .....+.+.+|..++.++ +||||+++++++.+.+..
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~-~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 128 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 128 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEE
Confidence 3567999999999999999999765 6889999999876433 223345678899998877 899999999999999999
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccc
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~ 754 (848)
++||||+++|+|.++++.. ..+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++.
T Consensus 129 ~lV~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 129 FFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 9999999999999998754 5689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 755 VGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 755 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
...........+||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 203 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~ 255 (396)
T 4dc2_A 203 GLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255 (396)
T ss_dssp CCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred cccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 54444555678999999999999999999999999999999999999999953
No 60
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.1e-37 Score=336.17 Aligned_cols=205 Identities=26% Similarity=0.375 Sum_probs=180.4
Q ss_pred HhhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCCe
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPH 673 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~ 673 (848)
...++|++.+.||+|+||.||+|+.+ +++.||||++++.... .....+.+.+|.++++.+ +||||+++++++.+.+.
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhh-hhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 45678999999999999999999765 6899999999775322 123456678899998876 99999999999999999
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
.|+||||+++|+|.++++.. ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 99999999999999998654 5688999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 754 FVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 754 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
............+||+.|+|||++.+..++.++||||+||++|||+||+.||..
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 220 (345)
T 1xjd_A 167 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 220 (345)
T ss_dssp CCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred hcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC
Confidence 754444445667899999999999999999999999999999999999999864
No 61
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-36 Score=337.40 Aligned_cols=310 Identities=20% Similarity=0.201 Sum_probs=153.4
Q ss_pred CCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEE
Q 038003 78 FPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLA 157 (848)
Q Consensus 78 l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 157 (848)
+++++.|++++|.++..-+..+..+++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..++.+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 45566666666665432222345566666666666666655555666666666666666666655555555666666666
Q ss_pred cCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCC
Q 038003 158 LCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSG 237 (848)
Q Consensus 158 L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~ 237 (848)
|++|+++...+..|+++++|++|++++|++++..|..|+.+++|++|++++|++++. .+..+++|+.|++++|.++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~- 199 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS- 199 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS-
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc-
Confidence 666665522222345555555555555555554455555555555555555555532 1333444444444444443
Q ss_pred CCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCccce
Q 038003 238 SIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIER 317 (848)
Q Consensus 238 ~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 317 (848)
+. ...++|++|++++|.+... |.. ..++|+.|++++|.+++.
T Consensus 200 -----------------------~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~------- 241 (390)
T 3o6n_A 200 -----------------------TL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT------- 241 (390)
T ss_dssp -----------------------EE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC-------
T ss_pred -----------------------cc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc-------
Confidence 21 1123444444444444322 111 112333333333333211
Q ss_pred eeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCcc
Q 038003 318 VLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHI 397 (848)
Q Consensus 318 l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l 397 (848)
..+..+++|++|++++|.+++. .|..+..+++|++|+|++|++
T Consensus 242 -------------~~l~~l~~L~~L~Ls~n~l~~~------------------------~~~~~~~l~~L~~L~L~~n~l 284 (390)
T 3o6n_A 242 -------------AWLLNYPGLVEVDLSYNELEKI------------------------MYHPFVKMQRLERLYISNNRL 284 (390)
T ss_dssp -------------GGGGGCTTCSEEECCSSCCCEE------------------------ESGGGTTCSSCCEEECCSSCC
T ss_pred -------------HHHcCCCCccEEECCCCcCCCc------------------------ChhHccccccCCEEECCCCcC
Confidence 1122334444444444444433 334444444455555555544
Q ss_pred CCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCC
Q 038003 398 VGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSH 471 (848)
Q Consensus 398 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 471 (848)
++ +|..+..+++|++|++++|+++ .+|..+..+++|+.|++++|+++.. + +..+++|+.|++++|+++.
T Consensus 285 ~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 285 VA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred cc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 42 3333344455555555555554 3344445555566666666665533 1 4555666666666666654
No 62
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=8.8e-37 Score=333.50 Aligned_cols=243 Identities=22% Similarity=0.286 Sum_probs=197.3
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCC--chhHHHHHHHHHHHhcCCCCcccceEEEeecCCe
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGN--MADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPH 673 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 673 (848)
..++|++.+.||+|+||+||+|... +|+.||+|++++...... ....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3467999999999999999999665 799999999987643221 1245778999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC----CEEEeec
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF----EAHVSDF 749 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~Df 749 (848)
.++||||+++|+|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+||+++.++ .+||+||
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 99999999999999999654 5689999999999999999999999 999999999999998877 7999999
Q ss_pred cCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcccccc-----------------c
Q 038003 750 GIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSIN-----------------F 812 (848)
Q Consensus 750 G~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~-----------------~ 812 (848)
|+++..... ......+||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .
T Consensus 164 G~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 242 (361)
T 2yab_A 164 GLAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFF 242 (361)
T ss_dssp SSCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHH
T ss_pred CCceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhc
Confidence 999887543 2335578999999999999989999999999999999999999998542210 0
Q ss_pred cccchhhhhhhhhcCCCCCCCCCCcccccceeec
Q 038003 813 SSFSNMIIDVNKILDPRLPTPSPSVMDYGGCHFM 846 (848)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (848)
..+...+.++...+-..-|..+|...+...+.|+
T Consensus 243 ~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 276 (361)
T 2yab_A 243 SQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276 (361)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTT
T ss_pred cCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCc
Confidence 1223333444444444445556666555555554
No 63
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=8.2e-38 Score=349.24 Aligned_cols=209 Identities=24% Similarity=0.292 Sum_probs=180.4
Q ss_pred HHHHhhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC
Q 038003 593 EIIKATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG 671 (848)
Q Consensus 593 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~ 671 (848)
++....++|++.+.||+|+||+||+|+.+ +++.||+|++++..... ....+.+.+|+.++..++||||++++++|.+.
T Consensus 68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 146 (437)
T 4aw2_A 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK-RAETACFREERDVLVNGDSKWITTLHYAFQDD 146 (437)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH-TTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhh-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC
Confidence 44455789999999999999999999765 57899999997643221 12234478899999999999999999999999
Q ss_pred CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccC
Q 038003 672 PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGI 751 (848)
Q Consensus 672 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 751 (848)
+..|+||||+++|+|.++++.. ...+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+
T Consensus 147 ~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 147 NNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp SEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhh
Confidence 9999999999999999999763 25689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC-cccccccccccCccccc-----cCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 752 AKFVGPHSSN-WTEFAGTFGYAAPEIAY-----TMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 752 ~~~~~~~~~~-~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
++........ ....+||+.|+|||++. +..++.++|||||||++|||+||+.||..
T Consensus 222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~ 283 (437)
T 4aw2_A 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA 283 (437)
T ss_dssp CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC
Confidence 9876543332 23468999999999987 45689999999999999999999999854
No 64
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.2e-37 Score=333.77 Aligned_cols=203 Identities=30% Similarity=0.396 Sum_probs=181.3
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCCeeE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~ 675 (848)
.++|++.+.||+|+||.||+|+.+ +++.||+|++++.... .....+.+.+|+.+++++ +||||+++++++.+.+..|
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 86 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 86 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSC-SHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhc-chHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence 367999999999999999999765 6889999999876433 334566788999999887 8999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||||+++|+|.++++.. ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 87 lv~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp EEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 999999999999998654 4689999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 756 GPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 756 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
..........+||+.|+|||++.+..++.++||||+||++|||+||+.||..
T Consensus 161 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 161 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 4444445667899999999999999999999999999999999999999964
No 65
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2e-36 Score=326.56 Aligned_cols=196 Identities=29% Similarity=0.454 Sum_probs=177.3
Q ss_pred CcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEEEe
Q 038003 601 FDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCE 679 (848)
Q Consensus 601 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV~e 679 (848)
|+..+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 122 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLME 122 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT----CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc----hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 677789999999999999765 79999999986542 3446778899999999999999999999999999999999
Q ss_pred ccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCCCC
Q 038003 680 YLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHS 759 (848)
Q Consensus 680 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~~~ 759 (848)
|+++++|.+++.. ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++.......
T Consensus 123 ~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 195 (321)
T 2c30_A 123 FLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV 195 (321)
T ss_dssp CCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred cCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCc
Confidence 9999999999854 3589999999999999999999999 99999999999999999999999999998876554
Q ss_pred CCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 760 SNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 760 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.......||+.|+|||++.+..+++++||||||+++|||+||+.||..
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~ 243 (321)
T 2c30_A 196 PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS 243 (321)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 445567899999999999998999999999999999999999999854
No 66
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=7.1e-38 Score=347.09 Aligned_cols=207 Identities=21% Similarity=0.298 Sum_probs=179.0
Q ss_pred HHHHhhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC
Q 038003 593 EIIKATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG 671 (848)
Q Consensus 593 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~ 671 (848)
+.....++|++.+.||+|+||+||+|+.+ +++.||+|++++..... ....+.+.+|+.+++.++||||++++++|.+.
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~-~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh-hHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 34455678999999999999999999765 68999999987643221 12234578899999999999999999999999
Q ss_pred CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccC
Q 038003 672 PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGI 751 (848)
Q Consensus 672 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 751 (848)
+..|+||||++||+|.++++. ..+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccce
Confidence 999999999999999999864 3588899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-CcccccccccccCccccccCC----CCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 752 AKFVGPHSS-NWTEFAGTFGYAAPEIAYTMR----ATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 752 ~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~----~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
++....... .....+||+.|+|||++.+.. ++.++|||||||++|||+||+.||..
T Consensus 215 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 275 (410)
T 3v8s_A 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275 (410)
T ss_dssp CEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred eEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence 987754332 224578999999999998655 78899999999999999999999854
No 67
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.4e-37 Score=334.67 Aligned_cols=204 Identities=26% Similarity=0.395 Sum_probs=168.4
Q ss_pred hcCCcccceeccCCceeEEEEEc----CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCe
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL----PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPH 673 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 673 (848)
.++|++.+.||+|+||.||+|+. .+++.||+|++++............+.+|+++++.++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999976 47899999999876543334455667899999999999999999999999999
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
.|+||||+++++|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 99999999999999998654 4688899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 754 FVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 754 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
............+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 223 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC
Confidence 654444444567899999999999998899999999999999999999999864
No 68
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=335.44 Aligned_cols=202 Identities=26% Similarity=0.402 Sum_probs=170.1
Q ss_pred hhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|++.+.||+|+||+||+|.+ .+++.||||++...... ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~---~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~ 84 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG---SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIF 84 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 357899999999999999999965 58999999998775432 23456789999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||||+++|+|.+++... ..+++..+..++.||+.||+|||++ ||+||||||+||++++++.+||+|||++...
T Consensus 85 lv~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~ 158 (347)
T 3zgw_A 85 MVLEYCPGGELFDYIISQ---DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKP 158 (347)
T ss_dssp EEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-
T ss_pred EEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccc
Confidence 999999999999998654 5689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCC-CCcccccccccccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCcc
Q 038003 756 GPHS-SNWTEFAGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 756 ~~~~-~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.... ......+||+.|+|||++.+..+ +.++||||+||++|||+||+.||+.
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 212 (347)
T 3zgw_A 159 KGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD 212 (347)
T ss_dssp -------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 4332 22345689999999999998775 8899999999999999999999864
No 69
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1e-36 Score=327.59 Aligned_cols=200 Identities=28% Similarity=0.429 Sum_probs=179.0
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||+||+|+.. +++.||+|++++.... .....+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence 467999999999999999999664 7999999999775432 12345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++|+|.++++.. ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 84 v~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 84 IMDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp EECCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 99999999999999754 5688999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.. ....+||+.|+|||++.+..++.++||||+||++|||+||+.||..
T Consensus 158 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 205 (318)
T 1fot_A 158 DV---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 205 (318)
T ss_dssp SC---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred Cc---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 32 3456899999999999999999999999999999999999999854
No 70
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.8e-36 Score=353.60 Aligned_cols=310 Identities=21% Similarity=0.246 Sum_probs=186.8
Q ss_pred CCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEE
Q 038003 77 SFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKL 156 (848)
Q Consensus 77 ~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 156 (848)
.+++++.|++++|.+.+..+..++.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+.+++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 35667777777777765444456677777777777777777666677777777777777777776666667777777777
Q ss_pred EcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCC
Q 038003 157 ALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLS 236 (848)
Q Consensus 157 ~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~ 236 (848)
+|++|.+++..+..|+++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++. .++.+++|+.|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCccc
Confidence 7777777744444456777777777777777766666677777777777777776643 2444556666666666655
Q ss_pred CCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCccc
Q 038003 237 GSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIE 316 (848)
Q Consensus 237 ~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 316 (848)
+ +....+|+.|++++|.+....+.. .++|+.|+|++|.+++ +..
T Consensus 206 ~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~-------------------------- 249 (597)
T 3oja_B 206 T-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAW-------------------------- 249 (597)
T ss_dssp E-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGG--------------------------
T ss_pred c-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--Chh--------------------------
Confidence 3 122234555555555554322211 1344444444444443 122
Q ss_pred eeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCc
Q 038003 317 RVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNH 396 (848)
Q Consensus 317 ~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~ 396 (848)
+..+++|+.|+|++|.+++..+..|+.+++|+.|++++|.+++ +|..+..+++|+.|+|++|.
T Consensus 250 ----------------l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~ 312 (597)
T 3oja_B 250 ----------------LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNH 312 (597)
T ss_dssp ----------------GGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSC
T ss_pred ----------------hccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCC
Confidence 3445566666666666665555555555555555555555543 34455556677777777777
Q ss_pred cCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccC
Q 038003 397 IVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLS 446 (848)
Q Consensus 397 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 446 (848)
++ .+|..+..+++|+.|+|++|.+++.. +..+++|+.|++++|.++
T Consensus 313 l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~ 358 (597)
T 3oja_B 313 LL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWD 358 (597)
T ss_dssp CC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEE
T ss_pred CC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCC
Confidence 76 45555666666666666666665331 344455555555555544
No 71
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.3e-37 Score=336.15 Aligned_cols=281 Identities=22% Similarity=0.256 Sum_probs=234.7
Q ss_pred ChHHHHHHHHHHHhccCCCCCCcccCCCCCCCCCCCCCCCCccCceEEcCCCCceEEEeccccCccccccCCccCCCCCC
Q 038003 2 LNEEAYALLKWKTSLQNQNLNSSLLSSWTLYPANATKISPCSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHL 81 (848)
Q Consensus 2 ~~~~~~all~~k~~~~~~~~~~~~l~sw~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l 81 (848)
+.+|++||++||+++..++ .+++++|... .....++|.|.||+|+.....+ .-...+++
T Consensus 25 ~~~~~~aLl~~k~~~~~~~--~~~~~~w~~~--~~~~~~~~~~~g~~~~~~~~~l-----------------~~~~~~~l 83 (328)
T 4fcg_A 25 LRPYHDVLSQWQRHYNADR--NRWHSAWRQA--NSNNPQIETRTGRALKATADLL-----------------EDATQPGR 83 (328)
T ss_dssp CCCHHHHHHHHHHHHHHCC--TTHHHHHHHH--TTTCTTSCCSHHHHHHHHHHHH-----------------HHHTSTTC
T ss_pred CchHHHHHHHHHHhccCCc--hhhhhhhccc--ccccccccccCCcchhhhHHHH-----------------hcccccce
Confidence 4679999999999997654 4678899421 1135789999999996321100 01234567
Q ss_pred cEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCC
Q 038003 82 ANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161 (848)
Q Consensus 82 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 161 (848)
+.|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++.+++|++|+|++|
T Consensus 84 ~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n 160 (328)
T 4fcg_A 84 VALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRAC 160 (328)
T ss_dssp CEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEE
T ss_pred eEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCC
Confidence 78888888887 78888888888888888888888 77888888888888888888888 77888888888888888888
Q ss_pred cCCCCCCCcccC---------ccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccc
Q 038003 162 NLHGSIPSSLGN---------LSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFN 232 (848)
Q Consensus 162 ~l~~~~p~~l~~---------l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~ 232 (848)
++.+.+|..++. +++|++|++++|+++ .+|..++.+++|++|+|++|+++ .+|..++.+++|++|++++
T Consensus 161 ~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~ 238 (328)
T 4fcg_A 161 PELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRG 238 (328)
T ss_dssp TTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTT
T ss_pred CCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcC
Confidence 888888877664 899999999999998 78888999999999999999999 4677899999999999999
Q ss_pred cCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccc
Q 038003 233 NSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLR 308 (848)
Q Consensus 233 n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 308 (848)
|.+.+.+|..++.+++|++|+|++|.+.+.+|..+.++++|++|+|++|++.+.+|+.++.+++|+.+++..|.+.
T Consensus 239 n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 239 CTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998877665
No 72
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6.8e-37 Score=336.18 Aligned_cols=202 Identities=27% Similarity=0.387 Sum_probs=179.2
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||.||+|... +++.||+|++.+.... .....+.+.+|+++++.++||||++++++|.+.+..|+
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV-ERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcc-cHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 367999999999999999999654 6899999999765432 22345778899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+.+|+|.++++.. ..+++..+..++.||+.||.|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 93 v~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQN---VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp EECCCTTEEHHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 99999999999999764 5689999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCCcccccccccccCcccccc---CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYT---MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.. ......+||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 167 ~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~ 219 (384)
T 4fr4_A 167 RE-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI 219 (384)
T ss_dssp TT-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CC-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCC
Confidence 43 33456789999999999874 4588999999999999999999999863
No 73
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=8e-37 Score=342.61 Aligned_cols=204 Identities=23% Similarity=0.358 Sum_probs=179.8
Q ss_pred HhhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCee
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 674 (848)
...++|++.+.||+|+||+||+|.. .+++.+|+|++..... .....+.+.+|+++++.++||||+++++++.+.+..
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 85 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL--SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHH 85 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC--HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEE
Confidence 3457799999999999999999955 5789999999876532 234456788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeC---CCCCEEEeeccC
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD---SNFEAHVSDFGI 751 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~kl~DfG~ 751 (848)
++||||+++|+|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+||+++ .++.+||+|||+
T Consensus 86 ~lv~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~ 159 (444)
T 3soa_A 86 YLIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGL 159 (444)
T ss_dssp EEEECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred EEEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCce
Confidence 9999999999999988654 5689999999999999999999999 999999999999998 467899999999
Q ss_pred ccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 752 AKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 752 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+..............||+.|+|||++.+..+++++||||+||++|+|++|+.||..
T Consensus 160 a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~ 215 (444)
T 3soa_A 160 AIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD 215 (444)
T ss_dssp CBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred eEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence 98876655555667899999999999998999999999999999999999999843
No 74
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=6.1e-37 Score=333.70 Aligned_cols=204 Identities=25% Similarity=0.336 Sum_probs=180.9
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCCee
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~ 674 (848)
..++|++.+.||+|+||+||+|+.+ +++.||||++++.... .....+.+.+|.+++..+ +||+|+++++++.+.+..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-cchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 3568999999999999999999765 5789999999775432 123456788999999988 899999999999999999
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccc
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~ 754 (848)
|+||||++||+|.++++.. ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++.
T Consensus 97 ~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 9999999999999998654 4689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 755 VGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 755 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
...........+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 223 (353)
T 2i0e_A 171 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223 (353)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC
Confidence 54444445667899999999999999999999999999999999999999864
No 75
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=324.90 Aligned_cols=203 Identities=28% Similarity=0.486 Sum_probs=178.6
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|.+.+.||+|+||+||+|.+. +++.||+|++... +....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 84 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF----DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNF 84 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEE
Confidence 467999999999999999999664 7899999988543 34567789999999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++++|.++++.. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 85 ITEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp EEECCTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred EEEecCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 99999999999999753 35689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCc--------------ccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcccc
Q 038003 757 PHSSNW--------------TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFS 809 (848)
Q Consensus 757 ~~~~~~--------------~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~ 809 (848)
...... ....||+.|+|||++.+..+++++||||||+++|||++|..||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~ 226 (310)
T 3s95_A 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYL 226 (310)
T ss_dssp --------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTS
T ss_pred cccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchh
Confidence 432211 14679999999999999999999999999999999999999986543
No 76
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2e-36 Score=324.97 Aligned_cols=203 Identities=24% Similarity=0.373 Sum_probs=175.0
Q ss_pred hhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
..++|++.+.||+|+||+||+|.+.+++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 96 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL 96 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC--------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc--cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence 3477999999999999999999888899999999876532 23345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++ ++.+++... ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 97 v~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 97 VFEFMEK-DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp EEECCSE-EHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred EEcCCCC-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 9999986 787777654 24588999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCCcccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
..........||+.|+|||++.+ ..++.++||||+||++|||+||+.||..
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 222 (311)
T 3niz_A 171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222 (311)
T ss_dssp SCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCC
Confidence 55455556788999999999876 4589999999999999999999999854
No 77
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=343.98 Aligned_cols=210 Identities=24% Similarity=0.288 Sum_probs=180.7
Q ss_pred HHHHHhhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeec
Q 038003 592 EEIIKATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYN 670 (848)
Q Consensus 592 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~ 670 (848)
.+.....++|++.+.||+|+||+||+|+.+ +++.||||++++.... .....+.+.+|..++..++||||+++++++.+
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~-~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDML-KRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 344456788999999999999999999764 7999999999764321 11233457889999999999999999999999
Q ss_pred CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 671 GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 671 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
.+..|+||||+++|+|.++++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeech
Confidence 99999999999999999999653 24688999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCC-cccccccccccCccccc-------cCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSSN-WTEFAGTFGYAAPEIAY-------TMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~~-~~~~~g~~~y~aPE~~~-------~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+++........ ....+||+.|+|||++. +..++.++|||||||++|||+||+.||..
T Consensus 208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 272 (412)
T 2vd5_A 208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA 272 (412)
T ss_dssp TCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred hheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC
Confidence 99887554332 23468999999999987 35689999999999999999999999854
No 78
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5e-37 Score=336.73 Aligned_cols=203 Identities=28% Similarity=0.360 Sum_probs=171.5
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHH-HhcCCCCcccceEEEeecCCeeE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLA-LKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~-l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
.++|++.+.||+|+||+||+|+.+ +++.||||++++..... ....+.+.+|..+ ++.++||||+++++++.+.+..|
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~-~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK-KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh-hHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 467999999999999999999765 68899999998765432 2334556777776 57789999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||||++||+|.++++.. ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 116 lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 999999999999998654 4688899999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 756 GPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 756 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
..........+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 241 (373)
T 2r5t_A 190 IEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 241 (373)
T ss_dssp BCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 4444445667899999999999999999999999999999999999999854
No 79
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5.3e-37 Score=328.96 Aligned_cols=207 Identities=36% Similarity=0.529 Sum_probs=172.5
Q ss_pred HhhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
....+|++.+.||+|+||+||+|++ +++.||||++..... .....+++.+|++++++++||||+++++++.+.+..+
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF--HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceE
Confidence 4456899999999999999999977 588899999876532 2344567899999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS--IIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
+||||+++|+|.+++........+++..+..++.||+.||+|||++ | |+||||||+||+++.++.+||+|||+++
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 9999999999999997764344589999999999999999999999 8 9999999999999999999999999998
Q ss_pred ccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 754 FVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 754 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
.............||+.|+|||++.+..+++++|||||||++|||+||+.||...
T Consensus 188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~ 242 (309)
T 3p86_A 188 LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL 242 (309)
T ss_dssp --------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred cccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 7655444445678999999999999999999999999999999999999998643
No 80
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.5e-37 Score=328.26 Aligned_cols=204 Identities=27% Similarity=0.373 Sum_probs=174.9
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||.||+|.. .++..||+|++...... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPRE-KEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSC-CHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccc-cHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 46799999999999999999965 47899999998654322 34456778999999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++++|.++++.. ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 89 v~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999999999998654 4689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 757 PHSS-NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 757 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
.... ......||+.|+|||++.+..+++++||||+|+++|||+||+.||...
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~ 215 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE 215 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 4332 223467899999999999999999999999999999999999998643
No 81
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.3e-36 Score=328.20 Aligned_cols=240 Identities=25% Similarity=0.340 Sum_probs=191.6
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||+||+|... +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc---cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 468999999999999999999665 899999999865532 2234567899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++++|.++++.. ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++.+.
T Consensus 83 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 83 FLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp EEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 99999999999998655 5689999999999999999999999 99999999999999999999999999998664
Q ss_pred CCC--CCcccccccccccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCccccccc----------------cccch
Q 038003 757 PHS--SNWTEFAGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINF----------------SSFSN 817 (848)
Q Consensus 757 ~~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~P~~~~~~~~----------------~~~~~ 817 (848)
... ......+||+.|+|||++.+..+ +.++|||||||++|||+||+.||....... ..+..
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCH
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCH
Confidence 222 22345689999999999987775 778999999999999999999996543321 12222
Q ss_pred hhhhhhhhcCCCCCCCCCCcccccceeec
Q 038003 818 MIIDVNKILDPRLPTPSPSVMDYGGCHFM 846 (848)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (848)
.+.++...+-..-|..||.+.+.....|+
T Consensus 237 ~~~~li~~~L~~dP~~R~t~~eil~h~~~ 265 (323)
T 3tki_A 237 APLALLHKILVENPSARITIPDIKKDRWY 265 (323)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred HHHHHHHHHccCChhhCcCHHHHhhChhh
Confidence 33333333444445666666666555554
No 82
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.2e-36 Score=332.38 Aligned_cols=207 Identities=22% Similarity=0.284 Sum_probs=179.6
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccC-CchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSG-NMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
.++|++.+.||+|+||+||+|.. .+++.||||++....... .....+.+.+|+++++.++||||+++++++.+.+..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46799999999999999999965 478999999987643221 1234677899999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCC---EEEeeccC
Q 038003 676 LVCEYLDRGSLARILGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGI 751 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~DfG~ 751 (848)
+||||+++++|.+.+.... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999988775431 223588999999999999999999999 9999999999999986654 99999999
Q ss_pred ccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 752 AKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 752 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+.............+||+.|+|||++.+..++.++||||+||++|||+||+.||..
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG 235 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC
Confidence 98876654444567899999999999998999999999999999999999999854
No 83
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.1e-36 Score=329.55 Aligned_cols=200 Identities=26% Similarity=0.328 Sum_probs=179.4
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||.||+|... +++.||+|++.+.... .....+.+.+|+++++.++||||+++++++.+.+..|+
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhc-cHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 467999999999999999999765 7999999999765432 12345778899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++|+|.++++.. ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 119 v~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp EEECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceecc
Confidence 99999999999998754 4689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.. ....+||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 193 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 240 (350)
T 1rdq_E 193 GR---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240 (350)
T ss_dssp SC---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CC---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC
Confidence 42 2456899999999999999999999999999999999999999854
No 84
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.6e-36 Score=322.37 Aligned_cols=244 Identities=23% Similarity=0.305 Sum_probs=191.2
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCC----------------------chhHHHHHHHHHHHh
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGN----------------------MADHDEFLNEVLALK 654 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~----------------------~~~~~~~~~E~~~l~ 654 (848)
.++|++.+.||+|+||.||+|.. .+++.||||++........ ....+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46799999999999999999965 4788999999876532211 112356889999999
Q ss_pred cCCCCcccceEEEeec--CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCC
Q 038003 655 EIRHRNNVKFHGFCYN--GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDIS 732 (848)
Q Consensus 655 ~l~hp~iv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk 732 (848)
+++||||+++++++.+ .+..++||||+++++|.++.. ...+++..+..++.||+.||+|||++ +|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 9999999999999986 568899999999999987653 24689999999999999999999999 99999999
Q ss_pred CCCeeeCCCCCEEEeeccCccccCCCCCCcccccccccccCccccccCC---CCccchhhhHHHHHHHHHhCCCCCcccc
Q 038003 733 SKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMR---ATEKYDVYSFGVLVFEVIKGNHPRDFFS 809 (848)
Q Consensus 733 ~~NIll~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~DiwSlG~il~elltg~~P~~~~~ 809 (848)
|+||+++.++.+||+|||+++.............||+.|+|||++.+.. ++.++|||||||++|||+||+.||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999999988765444445678999999999998655 3778999999999999999999986432
Q ss_pred cc---------------ccccchhhhhhhhhcCCCCCCCCCCcccccceeeccC
Q 038003 810 IN---------------FSSFSNMIIDVNKILDPRLPTPSPSVMDYGGCHFMLR 848 (848)
Q Consensus 810 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (848)
.. ...+...+.++...+-..-|..+|.+.+...+.|+.|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~ 298 (298)
T 2zv2_A 245 IMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298 (298)
T ss_dssp HHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred HHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence 10 1123334444444444555667777777766666654
No 85
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.7e-36 Score=325.14 Aligned_cols=203 Identities=25% Similarity=0.350 Sum_probs=179.4
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCC--chhHHHHHHHHHHHhcCCCCcccceEEEeecCCee
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGN--MADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 674 (848)
.++|++.+.||+|+||.||+|... +++.||+|++........ ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356999999999999999999665 789999999977543211 12467789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC----CEEEeecc
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF----EAHVSDFG 750 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~DfG 750 (848)
++||||+++++|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 9999999999999999654 5689999999999999999999999 999999999999999887 89999999
Q ss_pred CccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+++...... ......||+.|+|||++.+..++.++|||||||++|+|+||+.||..
T Consensus 164 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 219 (326)
T 2y0a_A 164 LAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219 (326)
T ss_dssp TCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence 998875432 23456799999999999988999999999999999999999999853
No 86
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.2e-36 Score=330.04 Aligned_cols=202 Identities=25% Similarity=0.413 Sum_probs=178.7
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 3567999999999999999999654 789999999976532 2345577889999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC---CEEEeeccCc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF---EAHVSDFGIA 752 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~kl~DfG~~ 752 (848)
+||||+++|+|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+||+++.++ .+||+|||++
T Consensus 105 lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EEECCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 999999999999988654 5688999999999999999999999 999999999999998654 5999999999
Q ss_pred cccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 753 KFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 753 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
...... ......+||+.|+|||++.+..++.++|||||||++|+|+||+.||..
T Consensus 179 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~ 232 (362)
T 2bdw_A 179 IEVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232 (362)
T ss_dssp BCCTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eEecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 877543 333557899999999999998999999999999999999999999853
No 87
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-36 Score=325.98 Aligned_cols=199 Identities=22% Similarity=0.301 Sum_probs=177.8
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||.||+|... +++.+|+|++... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 78 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEE
Confidence 468999999999999999999665 6889999998643 2345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC--CCCEEEeeccCccc
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS--NFEAHVSDFGIAKF 754 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~--~~~~kl~DfG~~~~ 754 (848)
||||+++++|.+++... ...+++..+..++.||+.||.|||++ ||+||||||+||+++. ++.+||+|||+++.
T Consensus 79 v~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~ 153 (321)
T 1tki_A 79 IFEFISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp EECCCCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence 99999999999999654 24689999999999999999999999 9999999999999987 78999999999988
Q ss_pred cCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 755 VGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 755 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.... .......||+.|+|||++.+..+++++||||+||++|+|+||+.||..
T Consensus 154 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 205 (321)
T 1tki_A 154 LKPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA 205 (321)
T ss_dssp CCTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CCCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcC
Confidence 7543 333556799999999999988889999999999999999999999854
No 88
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.3e-36 Score=344.69 Aligned_cols=207 Identities=25% Similarity=0.331 Sum_probs=183.6
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|...+.||+|+||.||+|+.+ +|+.||+|++.+.... .....+.+.+|++++++++||||+++++++.+.+..|+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK-KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhh-hhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 467999999999999999999765 7999999999775432 12345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 677 VCEYLDRGSLARILGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
||||++||+|.+++.... ....+++..+..++.||+.||+|||++ ||+||||||+||+++.+|.+||+|||+++..
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 999999999999886542 234689999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 756 GPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 756 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
..........+||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 340 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 340 KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp CTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred cCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 65544445568999999999999999999999999999999999999998653
No 89
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.9e-36 Score=320.04 Aligned_cols=200 Identities=24% Similarity=0.394 Sum_probs=174.6
Q ss_pred cCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
++|++.+.||+|+||+||+|... +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS--STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC--cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEE
Confidence 57999999999999999999664 789999999976542 234457788999999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||+++ ++.+.+... ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.++....
T Consensus 80 ~e~~~~-~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EECCSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred EecCCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 999987 555444332 25689999999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCcccccccccccCccccccCC-CCccchhhhHHHHHHHHHhCCCCCc
Q 038003 758 HSSNWTEFAGTFGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRD 806 (848)
Q Consensus 758 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~P~~ 806 (848)
.........||+.|+|||++.+.. ++.++||||+||++|||+||+.||.
T Consensus 154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~ 203 (292)
T 3o0g_A 154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203 (292)
T ss_dssp CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSC
T ss_pred ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCc
Confidence 555556678899999999998766 7999999999999999999999863
No 90
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.2e-36 Score=321.24 Aligned_cols=201 Identities=26% Similarity=0.380 Sum_probs=172.0
Q ss_pred cCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVC 678 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV~ 678 (848)
++|++.+.||+|+||+||+|...+++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG--GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccc--ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 57999999999999999999888899999999876532 2233467889999999999999999999999999999999
Q ss_pred eccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCCC
Q 038003 679 EYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPH 758 (848)
Q Consensus 679 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~~ 758 (848)
||+++ +|.+++... ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||.++.....
T Consensus 80 e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 80 EHLDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp ECCSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred EecCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 99986 898888654 24688999999999999999999999 9999999999999999999999999999877544
Q ss_pred CCCcccccccccccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 759 SSNWTEFAGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 759 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
........||+.|+|||++.+. .++.++||||+||++|||+||+.||..
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 203 (288)
T 1ob3_A 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 4444556789999999998764 589999999999999999999999864
No 91
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-36 Score=327.55 Aligned_cols=201 Identities=26% Similarity=0.392 Sum_probs=176.2
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|.+.+.||+|+||.||+|.+ .+++.||+|++...... .....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLK-KSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHcc-chhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 35799999999999999999975 58899999998765322 12234578899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+ +|+|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 87 v~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp EECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EEECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 99999 67888887544 5689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCcccccccccccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCcc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
... .....+||+.|+|||++.+..+ ++++||||+||++|+|+||+.||+.
T Consensus 160 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~ 210 (336)
T 3h4j_B 160 DGN-FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD 210 (336)
T ss_dssp TSB-TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBC
T ss_pred CCc-ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCC
Confidence 432 3355689999999999998776 7899999999999999999999864
No 92
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.6e-36 Score=326.89 Aligned_cols=217 Identities=37% Similarity=0.663 Sum_probs=189.2
Q ss_pred CccHHHHHHhhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEE
Q 038003 588 KIMHEEIIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGF 667 (848)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~ 667 (848)
.+...++....++|++.+.||+|+||.||+|...+++.||||++...... .....+.+|+++++.++||||++++++
T Consensus 19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ---GGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc---hHHHHHHHHHHHHHhccCCCccceEEE
Confidence 35567888899999999999999999999998888999999999765422 222358899999999999999999999
Q ss_pred eecCCeeEEEEeccCCCCHHhHhcCCCC-cccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEE
Q 038003 668 CYNGPHSFLVCEYLDRGSLARILGDDVT-AKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHV 746 (848)
Q Consensus 668 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl 746 (848)
+.+.+..++||||+++|+|.++++.... ...+++..+..++.|++.||+|||+++.+||+||||||+||+++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 9999999999999999999999976532 345899999999999999999999987779999999999999999999999
Q ss_pred eeccCccccCCCCCC-cccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 747 SDFGIAKFVGPHSSN-WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 747 ~DfG~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+|||+++........ .....||+.|+|||++.+..+++++|||||||++|||+||+.||+.
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 237 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 237 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCH
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccc
Confidence 999999877543332 2345699999999999988899999999999999999999999863
No 93
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.8e-36 Score=326.35 Aligned_cols=204 Identities=21% Similarity=0.390 Sum_probs=176.5
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC---
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP--- 672 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--- 672 (848)
..++|++.+.||+|+||.||+|.+. +++.||||+++... .....+.+.+|++++++++||||++++++|.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 80 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEK 80 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS---TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC---chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccch
Confidence 3467999999999999999999765 89999999997543 3345678999999999999999999999986543
Q ss_pred ------------------------------------------------------eeEEEEeccCCCCHHhHhcCCCCccc
Q 038003 673 ------------------------------------------------------HSFLVCEYLDRGSLARILGDDVTAKE 698 (848)
Q Consensus 673 ------------------------------------------------------~~~lV~e~~~~gsL~~~l~~~~~~~~ 698 (848)
..++||||+++++|.++++.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~ 160 (332)
T 3qd2_B 81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160 (332)
T ss_dssp HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence 37999999999999999988766667
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCCCCC------------Cccccc
Q 038003 699 LGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSS------------NWTEFA 766 (848)
Q Consensus 699 l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~~~~------------~~~~~~ 766 (848)
.++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++....... ......
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 78888999999999999999999 999999999999999999999999999988765421 223457
Q ss_pred ccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCc
Q 038003 767 GTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRD 806 (848)
Q Consensus 767 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~ 806 (848)
||+.|+|||++.+..+++++|||||||++|||+||..|+.
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~ 277 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM 277 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh
Confidence 9999999999999999999999999999999999988853
No 94
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.4e-36 Score=323.38 Aligned_cols=204 Identities=23% Similarity=0.365 Sum_probs=163.1
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|++.+.||+|+||.||+|... +++.||+|+++... .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 79 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS---EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLT 79 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCS---TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc---ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEE
Confidence 3467999999999999999999765 68999999987653 2233466889999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCC---CCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCc
Q 038003 676 LVCEYLDRGSLARILGDD---VTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIA 752 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~ 752 (848)
+||||+++ +|.+++... .....+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 80 lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~ 155 (317)
T 2pmi_A 80 LVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLA 155 (317)
T ss_dssp EEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSC
T ss_pred EEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccc
Confidence 99999984 898887532 1224588999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 753 KFVGPHSSNWTEFAGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 753 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+.............||+.|+|||++.+. .+++++|||||||++|||+||+.||..
T Consensus 156 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 211 (317)
T 2pmi_A 156 RAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPG 211 (317)
T ss_dssp EETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred eecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8876544444566889999999998764 589999999999999999999999854
No 95
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2e-36 Score=341.96 Aligned_cols=203 Identities=24% Similarity=0.330 Sum_probs=169.9
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||.||+|.. .+++.||||+++..... .......+.+|+++++.++||||+++++++.+.+..++
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 46799999999999999999965 47899999999765332 23345667889999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHH-DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+ . ||+||||||+|||++.++.+||+|||+++..
T Consensus 226 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp EECCCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EEeeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 99999999999988654 568999999999999999999998 8 9999999999999999999999999999876
Q ss_pred CCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 756 GPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 756 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
..........+||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 300 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 351 (446)
T 4ejn_A 300 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 351 (446)
T ss_dssp CC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence 5544555668899999999999999999999999999999999999999854
No 96
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.7e-36 Score=343.50 Aligned_cols=206 Identities=26% Similarity=0.353 Sum_probs=182.1
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|++.+.||+|+||.||+|... +|+.||+|++.+.... .......+.+|+++++.++||||+++++++.+.+..|
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~ 260 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC 260 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh-hhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence 3567999999999999999999764 7999999999775432 1234567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||||++||+|.+++... ....+++..+..++.||+.||+|||++ |||||||||+||+++.++.+||+|||+++..
T Consensus 261 lVmEy~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 261 LVLTLMNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp EEECCCCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEcCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceec
Confidence 999999999999998764 234589999999999999999999999 9999999999999999999999999999887
Q ss_pred CCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 756 GPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 756 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
.... .....+||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 337 ~~~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~ 388 (576)
T 2acx_A 337 PEGQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388 (576)
T ss_dssp CTTC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCS
T ss_pred ccCc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence 5432 335568999999999999988999999999999999999999998653
No 97
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.4e-36 Score=323.54 Aligned_cols=208 Identities=38% Similarity=0.608 Sum_probs=183.4
Q ss_pred HHHHhhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC
Q 038003 593 EIIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 593 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 672 (848)
++....++|+..+.||+|+||.||+|.+++++.||||++... .....+.+.+|+++++.++||||+++++++.+.+
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE----SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC----CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc----ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 444567899999999999999999999888999999998664 2345677899999999999999999999999999
Q ss_pred eeEEEEeccCCCCHHhHhcCCCC-cccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccC
Q 038003 673 HSFLVCEYLDRGSLARILGDDVT-AKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGI 751 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 751 (848)
..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999999999999999865422 23689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC--CcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 752 AKFVGPHSS--NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 752 ~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
++....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~ 243 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ 243 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccc
Confidence 987543222 22345689999999999988999999999999999999999999864
No 98
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-35 Score=327.15 Aligned_cols=200 Identities=23% Similarity=0.340 Sum_probs=177.5
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+....++
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 125 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 125 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence 467999999999999999999654 78999999986542 3345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC--CCCEEEeeccCccc
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS--NFEAHVSDFGIAKF 754 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~--~~~~kl~DfG~~~~ 754 (848)
||||+++|+|.+++... ...+++..+..++.||+.||+|||++ ||+||||||+||+++. ++.+||+|||+++.
T Consensus 126 v~E~~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~ 200 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATK 200 (387)
T ss_dssp EEECCCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred EEEcCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEeccccee
Confidence 99999999999998654 34689999999999999999999999 9999999999999974 47899999999988
Q ss_pred cCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 755 VGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 755 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
..... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 201 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 252 (387)
T 1kob_A 201 LNPDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG 252 (387)
T ss_dssp CCTTS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cCCCc-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCC
Confidence 75433 33456799999999999998999999999999999999999999864
No 99
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=7.9e-36 Score=322.28 Aligned_cols=192 Identities=27% Similarity=0.407 Sum_probs=152.1
Q ss_pred cceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC-CCcccceEEEeecCCeeEEEEecc
Q 038003 604 KFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-HRNNVKFHGFCYNGPHSFLVCEYL 681 (848)
Q Consensus 604 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lV~e~~ 681 (848)
.+.||+|+||.||+|... +++.||||++... ....+.+|+++++.+. ||||+++++++.+....++||||+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 88 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELL 88 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEcc
Confidence 378999999999999664 7899999998543 3456778999999996 999999999999999999999999
Q ss_pred CCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC---CEEEeeccCccccCCC
Q 038003 682 DRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF---EAHVSDFGIAKFVGPH 758 (848)
Q Consensus 682 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~kl~DfG~~~~~~~~ 758 (848)
++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++ .+||+|||+++.....
T Consensus 89 ~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 89 NGGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CSCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 999999999754 5689999999999999999999999 999999999999997665 8999999999877665
Q ss_pred CCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 759 SSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 759 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
.......+||+.|+|||++.+..+++++||||+||++|||+||+.||...
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 212 (325)
T 3kn6_A 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH 212 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 55556678899999999999999999999999999999999999998653
No 100
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.1e-36 Score=329.61 Aligned_cols=204 Identities=26% Similarity=0.428 Sum_probs=177.1
Q ss_pred hcCCcccceeccCCceeEEEEEcC--------CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEe
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP--------SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFC 668 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~ 668 (848)
.++|++.+.||+|+||.||+|.+. ++..||||+++... .....+.+.+|+++++++ +||||+++++++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 156 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC---BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc---CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 467999999999999999999652 35679999997653 334567789999999999 899999999999
Q ss_pred ecCCeeEEEEeccCCCCHHhHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCC
Q 038003 669 YNGPHSFLVCEYLDRGSLARILGDDV-------------TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKN 735 (848)
Q Consensus 669 ~~~~~~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~N 735 (848)
.+.+..|+||||+++|+|.++++... ....+++.++..++.||+.||+|||++ ||+||||||+|
T Consensus 157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~N 233 (370)
T 2psq_A 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 233 (370)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccchhh
Confidence 99999999999999999999987542 123588999999999999999999999 99999999999
Q ss_pred eeeCCCCCEEEeeccCccccCCCCC--CcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 736 VLLDSNFEAHVSDFGIAKFVGPHSS--NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 736 Ill~~~~~~kl~DfG~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
|+++.++.+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 234 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~ 308 (370)
T 2psq_A 234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 308 (370)
T ss_dssp EEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred EEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999987654332 2233557889999999999999999999999999999999 9999864
No 101
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=319.67 Aligned_cols=205 Identities=24% Similarity=0.400 Sum_probs=178.3
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC--ee
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP--HS 674 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~ 674 (848)
.++|.+.+.||+|+||+||+|.+. +++.||||++..... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 84 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceE
Confidence 467999999999999999999665 689999999976542 234567789999999999999999999988755 77
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeee----CCCCCEEEeecc
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL----DSNFEAHVSDFG 750 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~kl~DfG 750 (848)
++||||+++++|.++++.......+++..+..++.||+.||+|||++ ||+||||||+||++ +.++.+||+|||
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp EEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 99999999999999998764444589999999999999999999999 99999999999999 788889999999
Q ss_pred CccccCCCCCCcccccccccccCccccc--------cCCCCccchhhhHHHHHHHHHhCCCCCcccc
Q 038003 751 IAKFVGPHSSNWTEFAGTFGYAAPEIAY--------TMRATEKYDVYSFGVLVFEVIKGNHPRDFFS 809 (848)
Q Consensus 751 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~~DiwSlG~il~elltg~~P~~~~~ 809 (848)
+++...... ......||+.|+|||++. +..++.++|||||||++|||+||+.||....
T Consensus 162 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 227 (319)
T 4euu_A 162 AARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227 (319)
T ss_dssp TCEECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTT
T ss_pred CceecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 998875533 334567999999999986 4678999999999999999999999986433
No 102
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=313.49 Aligned_cols=243 Identities=26% Similarity=0.376 Sum_probs=174.9
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||.||+|.. .+++.||+|++...... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY-KAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhh-hhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 46799999999999999999965 57999999998765322 12335678899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+....
T Consensus 89 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 99999999999998754 35689999999999999999999999 99999999999999999999999999998875
Q ss_pred CCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccccccc-------------cccchhhhhhh
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINF-------------SSFSNMIIDVN 823 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~-------------~~~~~~~~~~~ 823 (848)
..........|++.|+|||++.+..+++++||||||+++|||+||+.||....... ..+...+.++.
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 243 (278)
T 3cok_A 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLI 243 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHHHHHHH
T ss_pred CCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHHHHHHH
Confidence 44444445678999999999998889999999999999999999999986533210 01222233333
Q ss_pred hhcCCCCCCCCCCcccccceeec
Q 038003 824 KILDPRLPTPSPSVMDYGGCHFM 846 (848)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~ 846 (848)
..+-..-|..||.+.+...+.|+
T Consensus 244 ~~~l~~dp~~Rps~~~~l~h~~~ 266 (278)
T 3cok_A 244 HQLLRRNPADRLSLSSVLDHPFM 266 (278)
T ss_dssp HHHSCSSGGGSCCHHHHTTSTTT
T ss_pred HHHcccCHhhCCCHHHHhcCccc
Confidence 33334445566666666555554
No 103
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-35 Score=334.42 Aligned_cols=202 Identities=25% Similarity=0.406 Sum_probs=179.3
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|.+.+.||+|+||.||+|.+. +|+.||||++...... .....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l 93 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIR-SLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM 93 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHH-HTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 357999999999999999999765 8999999999765322 12345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++|+|.+++... +.+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 94 v~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 94 VMEYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EEECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 99999999999999754 5689999999999999999999999 99999999999999999999999999998875
Q ss_pred CCCCCcccccccccccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCcc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.. ......+||+.|+|||++.+..+ ++++||||+||++|||+||+.||+.
T Consensus 168 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~ 218 (476)
T 2y94_A 168 DG-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218 (476)
T ss_dssp TT-CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cc-ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC
Confidence 43 33355789999999999988765 7899999999999999999999864
No 104
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=8.1e-36 Score=325.45 Aligned_cols=198 Identities=24% Similarity=0.386 Sum_probs=160.9
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|++.+.||+|+||.||+|.+. +++.||||+++... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 124 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEIS 124 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch------hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEE
Confidence 4567999999999999999999765 68899999987542 3456788999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC---CCCEEEeeccCc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSDFGIA 752 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~DfG~~ 752 (848)
+||||+++++|.+++... ..+++.++..++.||+.||.|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 125 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a 198 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLS 198 (349)
T ss_dssp EEECCCCSCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred EEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccc
Confidence 999999999999998754 5689999999999999999999999 9999999999999975 889999999999
Q ss_pred cccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 753 KFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 753 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+..... .......||+.|+|||++.+..+++++|||||||++|||+||+.||..
T Consensus 199 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 252 (349)
T 2w4o_A 199 KIVEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252 (349)
T ss_dssp ---------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cccCcc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 876542 223456799999999999998999999999999999999999999854
No 105
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=7.8e-36 Score=328.31 Aligned_cols=203 Identities=18% Similarity=0.182 Sum_probs=174.4
Q ss_pred HhhcCCcccceeccCCceeEEEEE------cCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC---CCcccceEE
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAE------LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR---HRNNVKFHG 666 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~l~~ 666 (848)
...++|.+.+.||+|+||+||+|. ..+++.||||+++.. ...++.+|+++++.++ |++|+++++
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~~~~l~~~~~~~iv~~~~ 134 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-------NPWEFYIGTQLMERLKPSMQHMFMKFYS 134 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-------CHHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-------ChhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence 345779999999999999999993 447889999998653 2456777888877776 999999999
Q ss_pred EeecCCeeEEEEeccCCCCHHhHhcCC--CCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC----
Q 038003 667 FCYNGPHSFLVCEYLDRGSLARILGDD--VTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS---- 740 (848)
Q Consensus 667 ~~~~~~~~~lV~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---- 740 (848)
++...+..++||||+++|+|.++++.. .....+++..+..|+.||+.||+|||++ +||||||||+|||++.
T Consensus 135 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~ 211 (365)
T 3e7e_A 135 AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLE 211 (365)
T ss_dssp EEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTC
T ss_pred eeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccC
Confidence 999999999999999999999998642 1235699999999999999999999999 9999999999999998
Q ss_pred -------CCCEEEeeccCccccC--CCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 741 -------NFEAHVSDFGIAKFVG--PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 741 -------~~~~kl~DfG~~~~~~--~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
++.+||+|||+++.+. .........+||+.|+|||++.+..+++++|||||||++|||+||+.||...
T Consensus 212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 288 (365)
T 3e7e_A 212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN 288 (365)
T ss_dssp C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccC
Confidence 8999999999997653 2222335578999999999999999999999999999999999999998543
No 106
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.6e-35 Score=325.29 Aligned_cols=311 Identities=22% Similarity=0.235 Sum_probs=241.0
Q ss_pred CcCCccEEEcCCCcCCCCCCC-cccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccce
Q 038003 149 QLSLIDKLALCHNNLHGSIPS-SLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTM 227 (848)
Q Consensus 149 ~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 227 (848)
.++++++|++++|.++ .+|. .+.++++|++|++++|.+++..+..|+.+++|++|+|++|++++..|..++.+++|++
T Consensus 43 ~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 4677888899888888 4554 4678888899999888888776778888888888888888888777777888888888
Q ss_pred eeccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCcccccccccc
Q 038003 228 MSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLL 307 (848)
Q Consensus 228 L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 307 (848)
|++++|+++...+..+..+++|++|++++|++++..|..+..+++|++|++++|.+++. .+..+++|+.|++++|.+
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLL 198 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCC
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccc
Confidence 88888888844444467888888888888888877777788888888888888887754 244556666666666665
Q ss_pred ccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCc
Q 038003 308 RGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKL 387 (848)
Q Consensus 308 ~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L 387 (848)
++. ...++|+.|++++|.+... |.. ..++|
T Consensus 199 ~~~-----------------------~~~~~L~~L~l~~n~l~~~-------------------------~~~--~~~~L 228 (390)
T 3o6n_A 199 STL-----------------------AIPIAVEELDASHNSINVV-------------------------RGP--VNVEL 228 (390)
T ss_dssp SEE-----------------------ECCSSCSEEECCSSCCCEE-------------------------ECC--CCSSC
T ss_pred ccc-----------------------CCCCcceEEECCCCeeeec-------------------------ccc--ccccc
Confidence 532 1123556666666655432 221 13678
Q ss_pred cEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccC
Q 038003 388 QVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNN 467 (848)
Q Consensus 388 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 467 (848)
+.|++++|++++. ..+..+++|++|++++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|++|+|++|
T Consensus 229 ~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n 305 (390)
T 3o6n_A 229 TILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHN 305 (390)
T ss_dssp CEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSS
T ss_pred cEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCC
Confidence 8888888888854 568888899999999999988888889999999999999999984 5667778899999999999
Q ss_pred cCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccCC
Q 038003 468 QLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDF 520 (848)
Q Consensus 468 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 520 (848)
+++ .+|..+..+++|+.|+|++|+|+.. + +..+++|++|++++|+++..
T Consensus 306 ~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 306 HLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred cce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccch
Confidence 998 5677788899999999999999754 2 67788899999999988764
No 107
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.8e-35 Score=312.69 Aligned_cols=204 Identities=25% Similarity=0.402 Sum_probs=181.8
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|.+.+.||+|+||.||+|... +++.+|+|++...... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhcc-CHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 467999999999999999999765 6889999998765432 33456778899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++++|.+++... ..+++..+..++.|++.|++|||++ ||+||||||+||+++.++.+||+|||.+....
T Consensus 93 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 93 VLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EEECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999999999988654 4688999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
..........|++.|+|||++.+..++.++||||||+++|||+||+.||...
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 218 (294)
T 2rku_A 167 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218 (294)
T ss_dssp STTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred cCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 5444445677999999999999888999999999999999999999998653
No 108
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=316.58 Aligned_cols=202 Identities=24% Similarity=0.334 Sum_probs=171.3
Q ss_pred cCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
++|++.+.||+|+||+||+|... +++.||+|++.... ......+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE--DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC--C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc--cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 67999999999999999999765 68999999986653 2234456788999999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||++++++.++++.. ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~~~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp EECCSEEHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEeCCCchHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 9999999999888654 5688999999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCcccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 758 HSSNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 758 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
.........|++.|+|||++.+ ..++.++||||+|+++|+|+||+.||...
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 206 (311)
T 4agu_A 155 PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGK 206 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 4444456789999999999876 56799999999999999999999998543
No 109
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.9e-36 Score=322.81 Aligned_cols=243 Identities=20% Similarity=0.292 Sum_probs=194.6
Q ss_pred hhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCC----chhHHHHHHHHHHHhcCCCCcccceEEEeecC
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGN----MADHDEFLNEVLALKEIRHRNNVKFHGFCYNG 671 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~ 671 (848)
..++|++.+.||+|+||.||+|.. .+++.||||+++....... ....+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 356799999999999999999964 5789999999977643221 11234567899999999999999999999999
Q ss_pred CeeEEEEeccCCC-CHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 672 PHSFLVCEYLDRG-SLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 672 ~~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
+..++||||+.+| +|.++++.. ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRH---PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 999998765 4689999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCCcccccccccccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCcccccccc-------ccchhhhhh
Q 038003 751 IAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINFS-------SFSNMIIDV 822 (848)
Q Consensus 751 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~P~~~~~~~~~-------~~~~~~~~~ 822 (848)
+++...... ......||+.|+|||++.+..+ ++++|||||||++|||+||+.||........ .+...+.++
T Consensus 176 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~l~~l 254 (335)
T 3dls_A 176 SAAYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSL 254 (335)
T ss_dssp TCEECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTTCCCCSSCCCHHHHHH
T ss_pred cceECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhhccCCCcccCHHHHHH
Confidence 998875533 3345679999999999988776 8899999999999999999999865433211 123333444
Q ss_pred hhhcCCCCCCCCCCcccccceeec
Q 038003 823 NKILDPRLPTPSPSVMDYGGCHFM 846 (848)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~ 846 (848)
...+-..-|..||.+.+.....|+
T Consensus 255 i~~~L~~dP~~Rps~~ell~hp~~ 278 (335)
T 3dls_A 255 VSGLLQPVPERRTTLEKLVTDPWV 278 (335)
T ss_dssp HHHHTCSSGGGSCCHHHHHHCTTT
T ss_pred HHHHccCChhhCcCHHHHhcCccc
Confidence 444444445556666555554443
No 110
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=9.4e-36 Score=323.46 Aligned_cols=198 Identities=22% Similarity=0.323 Sum_probs=173.2
Q ss_pred HhhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCCe
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPH 673 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~ 673 (848)
...++|++.+.||+|+||+||+|..+ +++.||||++++... ...+|++++.++ +||||+++++++.+.+.
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~ 90 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------DPTEEIEILLRYGQHPNIITLKDVYDDGKY 90 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------CCHHHHHHHHHHTTSTTBCCEEEEEECSSE
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCE
Confidence 34567999999999999999999665 788999999876531 134688888777 79999999999999999
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCC----CCEEEeec
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSN----FEAHVSDF 749 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~----~~~kl~Df 749 (848)
.|+||||+++|+|.+++... +.+++..+..++.||+.||+|||++ ||+||||||+||++..+ +.+||+||
T Consensus 91 ~~lv~E~~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Df 164 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDF 164 (342)
T ss_dssp EEEEECCCCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCC
T ss_pred EEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEEC
Confidence 99999999999999998765 5689999999999999999999999 99999999999998543 35999999
Q ss_pred cCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 750 GIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 750 G~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
|+++............+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 165 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 222 (342)
T 2qr7_A 165 GFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN 222 (342)
T ss_dssp TTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred CCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCC
Confidence 9999876555555667899999999999988899999999999999999999999864
No 111
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=7.6e-35 Score=312.49 Aligned_cols=216 Identities=35% Similarity=0.542 Sum_probs=186.6
Q ss_pred ccHHHHHHhhcCCccc------ceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCccc
Q 038003 589 IMHEEIIKATDDFDEK------FCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNV 662 (848)
Q Consensus 589 ~~~~~~~~~~~~~~~~------~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv 662 (848)
+...++..++++|... +.||+|+||.||+|.. +++.||||++............+.+.+|++++++++||||+
T Consensus 15 ~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~ 93 (307)
T 2nru_A 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93 (307)
T ss_dssp CCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBC
T ss_pred ccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeE
Confidence 4567778888888777 8999999999999987 58899999987654333345567889999999999999999
Q ss_pred ceEEEeecCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC
Q 038003 663 KFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF 742 (848)
Q Consensus 663 ~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 742 (848)
++++++.+.+..++||||+++++|.+++........+++..+..++.||+.||+|||++ ||+||||||+||+++.++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~ 170 (307)
T 2nru_A 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAF 170 (307)
T ss_dssp CEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTC
T ss_pred EEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCC
Confidence 99999999999999999999999999987654445689999999999999999999999 999999999999999999
Q ss_pred CEEEeeccCccccCCCCCC--cccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcccc
Q 038003 743 EAHVSDFGIAKFVGPHSSN--WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFS 809 (848)
Q Consensus 743 ~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~ 809 (848)
.+||+|||.++........ .....|++.|+|||++.+ .++.++||||||+++|+|+||+.||....
T Consensus 171 ~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 238 (307)
T 2nru_A 171 TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR 238 (307)
T ss_dssp CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred cEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCc
Confidence 9999999999876543222 234578999999998875 47889999999999999999999986543
No 112
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=318.49 Aligned_cols=202 Identities=27% Similarity=0.461 Sum_probs=173.8
Q ss_pred hcCCcccceeccCCceeEEEEEcC----CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCe
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP----SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPH 673 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 673 (848)
.++|++.+.||+|+||.||+|.+. .+..||||+++... .....+.+.+|++++++++||||+++++++.+.+.
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY---TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 467999999999999999999764 34469999987643 33456778999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
.++||||+++++|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred cEEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999999999654 34689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCc---ccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 754 FVGPHSSNW---TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 754 ~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
......... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~ 257 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWN 257 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCccc
Confidence 875433221 22345778999999998899999999999999999999 9999854
No 113
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.8e-35 Score=318.74 Aligned_cols=204 Identities=25% Similarity=0.408 Sum_probs=182.3
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|.+.+.||+|+||.||+|.+. +++.||+|++...... .....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 117 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF 117 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE
Confidence 3467999999999999999999665 6889999998765432 3445677889999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||||+++++|.+++... ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++...
T Consensus 118 lv~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 118 VVLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp EEECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 999999999999988654 5688999999999999999999999 9999999999999999999999999999887
Q ss_pred CCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 756 GPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 756 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
...........|++.|+|||++.+..++.++||||||+++|||+||+.||..
T Consensus 192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 243 (335)
T 2owb_A 192 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 243 (335)
T ss_dssp CSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC
Confidence 6544445567899999999999998899999999999999999999999865
No 114
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.2e-35 Score=316.50 Aligned_cols=203 Identities=24% Similarity=0.342 Sum_probs=179.5
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCC--chhHHHHHHHHHHHhcCCCCcccceEEEeecCCee
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGN--MADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 674 (848)
.++|++.+.||+|+||.||+|... +++.||+|++........ ....+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467999999999999999999765 789999999977543221 12467789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC----CEEEeecc
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF----EAHVSDFG 750 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~DfG 750 (848)
++||||+++++|.+++... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 9999999999999999754 5688999999999999999999999 999999999999999888 79999999
Q ss_pred CccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
++....... ......|++.|+|||++.+..++.++||||||+++|+|+||+.||..
T Consensus 165 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 220 (321)
T 2a2a_A 165 LAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (321)
T ss_dssp TCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC
Confidence 998775432 23456799999999999998999999999999999999999999854
No 115
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.6e-35 Score=347.45 Aligned_cols=205 Identities=25% Similarity=0.328 Sum_probs=181.7
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCCee
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~ 674 (848)
..++|++.+.||+|+||+||+|... +++.||||++++.... .....+.+..|.+++..+ +||+|+++++++.+.+..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~-~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHH-HTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 4568999999999999999999765 6889999999875332 123456678899999988 799999999999999999
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccc
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~ 754 (848)
|+||||+++|+|.++++.. ..+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+++.
T Consensus 418 ~lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 9999999999999999754 5689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 755 VGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 755 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
...........+||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 492 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~ 545 (674)
T 3pfq_A 492 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 545 (674)
T ss_dssp CCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC
Confidence 554455556788999999999999999999999999999999999999998643
No 116
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=324.72 Aligned_cols=197 Identities=25% Similarity=0.341 Sum_probs=168.5
Q ss_pred CcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEEEe
Q 038003 601 FDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCE 679 (848)
Q Consensus 601 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV~e 679 (848)
|...+.||+|+||.||+|.. .+++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E 166 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVME 166 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 34467899999999999965 579999999987642 3456778999999999999999999999999999999999
Q ss_pred ccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeee--CCCCCEEEeeccCccccCC
Q 038003 680 YLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL--DSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 680 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll--~~~~~~kl~DfG~~~~~~~ 757 (848)
|+++++|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++.+..
T Consensus 167 ~~~~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~ 241 (373)
T 2x4f_A 167 YVDGGELFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241 (373)
T ss_dssp CCTTCEEHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT
T ss_pred CCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCC
Confidence 99999999888643 24688999999999999999999999 99999999999999 6778999999999998754
Q ss_pred CCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 758 HSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 758 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 242 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 290 (373)
T 2x4f_A 242 RE-KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG 290 (373)
T ss_dssp TC-BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cc-ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 33 23446799999999999988899999999999999999999999854
No 117
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.5e-35 Score=324.72 Aligned_cols=200 Identities=27% Similarity=0.357 Sum_probs=165.8
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|++.+.||+|+||+||+|... +++.||||++.... ...+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 92 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-----AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLA 92 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-----TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-----cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEE
Confidence 3568999999999999999999765 89999999986542 22356789999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCC--EEEeeccCcc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE--AHVSDFGIAK 753 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~--~kl~DfG~~~ 753 (848)
+||||+++|+|.+++... +.+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||+++
T Consensus 93 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~ 166 (361)
T 3uc3_A 93 IIMEYASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK 166 (361)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-
T ss_pred EEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccc
Confidence 999999999999998644 4689999999999999999999999 9999999999999987765 9999999997
Q ss_pred ccCCCCCCcccccccccccCccccccCCCCcc-chhhhHHHHHHHHHhCCCCCccc
Q 038003 754 FVGPHSSNWTEFAGTFGYAAPEIAYTMRATEK-YDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 754 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~DiwSlG~il~elltg~~P~~~~ 808 (848)
..... ......+||+.|+|||++.+..++.+ +||||+||++|+|+||+.||...
T Consensus 167 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 221 (361)
T 3uc3_A 167 SSVLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDP 221 (361)
T ss_dssp ---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC--
T ss_pred ccccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCC
Confidence 54332 22345679999999999988877655 89999999999999999998643
No 118
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.9e-35 Score=309.56 Aligned_cols=202 Identities=25% Similarity=0.414 Sum_probs=178.1
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 81 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEE
Confidence 3578999999999999999999654 689999999876542 2345577889999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCC---EEEeeccCc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGIA 752 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~DfG~~ 752 (848)
+||||+++++|.+.+... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||.+
T Consensus 82 ~v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~ 155 (284)
T 3kk8_A 82 LVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 155 (284)
T ss_dssp EEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceee
Confidence 999999999998888654 5688999999999999999999999 9999999999999986655 999999999
Q ss_pred cccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 753 KFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 753 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
...... .......|++.|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 156 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 209 (284)
T 3kk8_A 156 IEVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209 (284)
T ss_dssp EECCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEcccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC
Confidence 877543 333456799999999999999999999999999999999999999843
No 119
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=6.1e-35 Score=324.13 Aligned_cols=205 Identities=20% Similarity=0.265 Sum_probs=178.1
Q ss_pred hhcCCcccceeccC--CceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCe
Q 038003 597 ATDDFDEKFCIGKG--GQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPH 673 (848)
Q Consensus 597 ~~~~~~~~~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 673 (848)
..++|++.+.||+| +||.||+|... +++.||||+++.... .....+.+.+|+++++.++||||+++++++.+.+.
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 100 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC--SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE 100 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc--ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence 35679999999999 99999999765 799999999977542 23456778899999999999999999999999999
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
.++||||+++|+|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+.
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~ 176 (389)
T 3gni_B 101 LWVVTSFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 176 (389)
T ss_dssp EEEEEECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEEccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccce
Confidence 99999999999999998654 234589999999999999999999999 99999999999999999999999999886
Q ss_pred ccCCCC-------CCcccccccccccCcccccc--CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 754 FVGPHS-------SNWTEFAGTFGYAAPEIAYT--MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 754 ~~~~~~-------~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
...... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 239 (389)
T 3gni_B 177 SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 239 (389)
T ss_dssp ECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 542211 11233478999999999987 5789999999999999999999999864
No 120
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.9e-36 Score=322.26 Aligned_cols=203 Identities=27% Similarity=0.385 Sum_probs=169.7
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCe---
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPH--- 673 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~--- 673 (848)
.++|++.+.||+|+||.||+|.+ .+++.||||+++..... .....+.+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTT-SHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccC-CHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 46799999999999999999975 57899999999775322 34456678999999999999999999999876543
Q ss_pred -eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCc
Q 038003 674 -SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIA 752 (848)
Q Consensus 674 -~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~ 752 (848)
.|+||||+++++|.++++.. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred ccEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 49999999999999998654 4689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC---CcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 753 KFVGPHSS---NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 753 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~ 221 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 87654322 12345689999999999999999999999999999999999999864
No 121
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.5e-35 Score=309.75 Aligned_cols=201 Identities=23% Similarity=0.362 Sum_probs=153.7
Q ss_pred cCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
++|++.+.||+|+||.||+|.+ .+++.||+|++...... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcc-hHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 5799999999999999999975 47899999999775433 234466788999999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||+ ++++.+++... ..+++..+..++.|++.||.|||++ ||+||||||+||+++.++.+||+|||.+.....
T Consensus 92 ~e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred ehhc-CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 9999 56787777654 4689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCcccccccccccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCccc
Q 038003 758 HSSNWTEFAGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 758 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
.. ......||+.|+|||++.+..+ ++++||||+|+++|||+||+.||...
T Consensus 165 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 215 (275)
T 2eue_A 165 GN-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 215 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cc-cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 32 2345678999999999987765 78999999999999999999998653
No 122
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-35 Score=322.08 Aligned_cols=211 Identities=28% Similarity=0.324 Sum_probs=174.2
Q ss_pred HHHhhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccC-CchhHHHHHHHHHHHhcCCCCcccceEEEeecC
Q 038003 594 IIKATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSG-NMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG 671 (848)
Q Consensus 594 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~ 671 (848)
+....++|++.+.||+|+||+||+|.. .++..||+|++....... .....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 445667899999999999999999965 478899999987653321 234567889999999999999999999999999
Q ss_pred CeeEEEEeccCCCCHHhHhcCCC-------------------------------------CcccCCHHHHHHHHHHHHHH
Q 038003 672 PHSFLVCEYLDRGSLARILGDDV-------------------------------------TAKELGWNRRINVIKGVANA 714 (848)
Q Consensus 672 ~~~~lV~e~~~~gsL~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~qia~~ 714 (848)
+..++||||+++|+|.++++... ....+++..+..++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 99999999999999999885210 01224567788999999999
Q ss_pred HHHHhhCCCCCeEEcCCCCCCeeeCCCC--CEEEeeccCccccCCCCC----CcccccccccccCcccccc--CCCCccc
Q 038003 715 LSYLHHDCLPSIIHRDISSKNVLLDSNF--EAHVSDFGIAKFVGPHSS----NWTEFAGTFGYAAPEIAYT--MRATEKY 786 (848)
Q Consensus 715 L~~LH~~~~~~ivH~Dlk~~NIll~~~~--~~kl~DfG~~~~~~~~~~----~~~~~~g~~~y~aPE~~~~--~~~~~~~ 786 (848)
|+|||++ +|+||||||+||+++.++ .+||+|||+++.+..... ......||+.|+|||++.+ ..+++++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 899999999986533221 2245679999999999875 6788999
Q ss_pred hhhhHHHHHHHHHhCCCCCcc
Q 038003 787 DVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 787 DiwSlG~il~elltg~~P~~~ 807 (848)
|||||||++|||+||+.||..
T Consensus 258 DiwslG~il~el~~g~~pf~~ 278 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPG 278 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCC
T ss_pred HHHHHHHHHHHHHHCCCCCCC
Confidence 999999999999999999854
No 123
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.4e-35 Score=308.07 Aligned_cols=238 Identities=21% Similarity=0.279 Sum_probs=194.1
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|++.+.||+|+||.||+|... ++..+|+|++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF----VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIY 82 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG----CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc----cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEE
Confidence 3567999999999999999999665 67899999987653 234677899999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeee---CCCCCEEEeeccCc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL---DSNFEAHVSDFGIA 752 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfG~~ 752 (848)
+||||+++++|.+++... ..+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||.+
T Consensus 83 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~ 156 (277)
T 3f3z_A 83 LVMELCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156 (277)
T ss_dssp EEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence 999999999999988654 5688999999999999999999999 99999999999999 78899999999999
Q ss_pred cccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcccccc-----------------cccc
Q 038003 753 KFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSIN-----------------FSSF 815 (848)
Q Consensus 753 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~-----------------~~~~ 815 (848)
....... ......||+.|+|||++.+. +++++||||||+++|||+||+.||...... ...+
T Consensus 157 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (277)
T 3f3z_A 157 ARFKPGK-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNV 234 (277)
T ss_dssp EECCTTS-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTS
T ss_pred eeccCcc-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcC
Confidence 8775433 33456799999999998764 899999999999999999999998643221 0022
Q ss_pred chhhhhhhhhcCCCCCCCCCCcccccceeec
Q 038003 816 SNMIIDVNKILDPRLPTPSPSVMDYGGCHFM 846 (848)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (848)
...+.++...+-..-|..||...+.....|+
T Consensus 235 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 265 (277)
T 3f3z_A 235 SPQAESLIRRLLTKSPKQRITSLQALEHEWF 265 (277)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCHHH
Confidence 3334444444444556666666665555443
No 124
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.5e-35 Score=313.67 Aligned_cols=205 Identities=26% Similarity=0.365 Sum_probs=171.9
Q ss_pred hhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccC-CchhHHHHHHHHHHHhcC---CCCcccceEEEeecC
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSG-NMADHDEFLNEVLALKEI---RHRNNVKFHGFCYNG 671 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~E~~~l~~l---~hp~iv~l~~~~~~~ 671 (848)
..++|++.+.||+|+||+||+|.+ .+++.||||++....... .......+.+|+++++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457899999999999999999976 578999999987543211 112234566777777766 499999999999876
Q ss_pred C-----eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEE
Q 038003 672 P-----HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHV 746 (848)
Q Consensus 672 ~-----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl 746 (848)
. ..++||||+.+ +|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVDQ-DLRTYLDKA-PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCCC-BHHHHHHTC-CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhhc-CHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 5 57999999975 999998765 234489999999999999999999999 9999999999999999999999
Q ss_pred eeccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 747 SDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 747 ~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+|||.++...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 162 ~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 221 (308)
T 3g33_A 162 ADFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG 221 (308)
T ss_dssp CSCSCTTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCC
T ss_pred eeCccccccCCCc-ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999998775433 33557899999999999999999999999999999999999999854
No 125
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.2e-34 Score=305.76 Aligned_cols=241 Identities=25% Similarity=0.337 Sum_probs=195.4
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|++.+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 81 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG---CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc---chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEE
Confidence 3467999999999999999999765 78999999987653 2244577899999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||||+++++|.+++... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+...
T Consensus 82 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 155 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVF 155 (276)
T ss_dssp EEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence 999999999999998654 5688999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCC--CCcccccccccccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCccccccc----------------cccc
Q 038003 756 GPHS--SNWTEFAGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINF----------------SSFS 816 (848)
Q Consensus 756 ~~~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~P~~~~~~~~----------------~~~~ 816 (848)
.... .......|++.|+|||++.+..+ +.++||||||+++|||+||+.||....... ..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (276)
T 2yex_A 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 235 (276)
T ss_dssp EETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSC
T ss_pred CCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcC
Confidence 4322 22344678999999999987765 778999999999999999999996543211 1222
Q ss_pred hhhhhhhhhcCCCCCCCCCCcccccceeec
Q 038003 817 NMIIDVNKILDPRLPTPSPSVMDYGGCHFM 846 (848)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (848)
..+.++...+-..-|..||.+.+...+.|+
T Consensus 236 ~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 265 (276)
T 2yex_A 236 SAPLALLHKILVENPSARITIPDIKKDRWY 265 (276)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred HHHHHHHHHHCCCCchhCCCHHHHhcCccc
Confidence 333333444444456667776666655554
No 126
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2e-34 Score=314.91 Aligned_cols=306 Identities=25% Similarity=0.383 Sum_probs=149.1
Q ss_pred ccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccc
Q 038003 147 IGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLT 226 (848)
Q Consensus 147 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 226 (848)
+..+++|++|++++|.++ .+|. +..+++|++|++++|++++. +. +..+++|++|+|++|.+++ +| .+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence 445666777777777766 3443 66667777777777776643 33 6666666666666666663 32 455666666
Q ss_pred eeeccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccc
Q 038003 227 MMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNL 306 (848)
Q Consensus 227 ~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 306 (848)
+|++++|.+++. +. +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..
T Consensus 114 ~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~------------- 175 (347)
T 4fmz_A 114 ELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IAN------------- 175 (347)
T ss_dssp EEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGG-------------
T ss_pred EEECcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hcc-------------
Confidence 666666666532 22 4555555555555553332222 24444555555555554443211 333
Q ss_pred cccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCC
Q 038003 307 LRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPK 386 (848)
Q Consensus 307 l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~ 386 (848)
+++|+.|++++|.+.+..+ +..+++
T Consensus 176 -----------------------------l~~L~~L~l~~n~l~~~~~--------------------------~~~l~~ 200 (347)
T 4fmz_A 176 -----------------------------LTDLYSLSLNYNQIEDISP--------------------------LASLTS 200 (347)
T ss_dssp -----------------------------CTTCSEEECTTSCCCCCGG--------------------------GGGCTT
T ss_pred -----------------------------CCCCCEEEccCCccccccc--------------------------ccCCCc
Confidence 3444444444444432211 223333
Q ss_pred ccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceecccc
Q 038003 387 LQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSN 466 (848)
Q Consensus 387 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 466 (848)
|+.|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|++|++++|++++. ..+..+++|++|++++
T Consensus 201 L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~ 274 (347)
T 4fmz_A 201 LHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGS 274 (347)
T ss_dssp CCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCS
T ss_pred cceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccC
Confidence 4444444444432222 3344444444444444442222 44444444444444444432 2344444444444444
Q ss_pred CcCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCcc
Q 038003 467 NQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNEL 541 (848)
Q Consensus 467 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l 541 (848)
|++++. ..+..+++|+.|++++|++++..|..+..+++|++|++++|++++..| +..+++|+.+++++|++
T Consensus 275 n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 275 NQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVI 345 (347)
T ss_dssp SCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC--
T ss_pred CccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhcc
Confidence 444432 234444455555555555544444445555555555555555554333 44555555555555554
No 127
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=8.8e-35 Score=340.88 Aligned_cols=311 Identities=22% Similarity=0.216 Sum_probs=250.9
Q ss_pred cCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceee
Q 038003 150 LSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMS 229 (848)
Q Consensus 150 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 229 (848)
+.+++.|++++|.+....+..++++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 56788899999998854444578889999999999999987778889999999999999999988788888899999999
Q ss_pred ccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCcccccccccccc
Q 038003 230 LFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRG 309 (848)
Q Consensus 230 l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 309 (848)
|++|.+++..+..|+.+++|++|+|++|.+++..|..|..+++|++|+|++|.+++.. +..+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 9999988655556788888888888888888888888888888888888888887642 4556667777777776654
Q ss_pred ccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccE
Q 038003 310 VIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQV 389 (848)
Q Consensus 310 ~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~ 389 (848)
. ...++|+.|++++|.++... ..+ .++|+.
T Consensus 207 l-----------------------~~~~~L~~L~ls~n~l~~~~-------------------------~~~--~~~L~~ 236 (597)
T 3oja_B 207 L-----------------------AIPIAVEELDASHNSINVVR-------------------------GPV--NVELTI 236 (597)
T ss_dssp E-----------------------ECCTTCSEEECCSSCCCEEE-------------------------CSC--CSCCCE
T ss_pred c-----------------------cCCchhheeeccCCcccccc-------------------------ccc--CCCCCE
Confidence 2 12245666666666665321 111 257888
Q ss_pred EEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcC
Q 038003 390 LDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQL 469 (848)
Q Consensus 390 L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 469 (848)
|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.+
T Consensus 237 L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l 313 (597)
T 3oja_B 237 LKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHL 313 (597)
T ss_dssp EECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCC
T ss_pred EECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCC
Confidence 8999998885 3678889999999999999998888899999999999999999985 577778899999999999999
Q ss_pred CCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccCC
Q 038003 470 SHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDF 520 (848)
Q Consensus 470 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 520 (848)
+ .+|..+..+++|+.|+|++|.|++. | +..+++|+.|+|++|++++.
T Consensus 314 ~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 314 L-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp C-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred C-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCCh
Confidence 8 5788889999999999999999764 2 67788999999999999864
No 128
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.8e-35 Score=309.46 Aligned_cols=200 Identities=28% Similarity=0.434 Sum_probs=177.2
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
.++|++.+.||+|+||.||+|.+.+++.||+|++.... ...+++.+|++++++++||||+++++++.+.+..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 83 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-----cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEE
Confidence 46799999999999999999998889999999987642 2346789999999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||+++++|.++++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp EECCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EEeCCCCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccc
Confidence 9999999999999654 24688999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 758 HSS-NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 758 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
... ......+++.|+|||++.+..+++++||||+|+++|||+| |+.||..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~ 210 (269)
T 4hcu_A 159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210 (269)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC
Confidence 221 1233456788999999998899999999999999999999 9999864
No 129
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=8.3e-35 Score=319.51 Aligned_cols=251 Identities=24% Similarity=0.340 Sum_probs=201.3
Q ss_pred HHHHHHhhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCc----hhHHHHHHHHHHHhcC-CCCcccce
Q 038003 591 HEEIIKATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNM----ADHDEFLNEVLALKEI-RHRNNVKF 664 (848)
Q Consensus 591 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~----~~~~~~~~E~~~l~~l-~hp~iv~l 664 (848)
........++|++.+.||+|+||.||+|.+. +|+.||||++......... ...+.+.+|+.+++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444556678999999999999999999775 7999999998765321111 2245678899999999 89999999
Q ss_pred EEEeecCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCE
Q 038003 665 HGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEA 744 (848)
Q Consensus 665 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 744 (848)
++++...+..++||||+++++|.+++... ..+++..+..++.||+.||.|||+. ||+||||||+||+++.++.+
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~i 239 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQI 239 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCE
Confidence 99999999999999999999999998643 5689999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccCCCCCCcccccccccccCcccccc------CCCCccchhhhHHHHHHHHHhCCCCCcccccc-------
Q 038003 745 HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT------MRATEKYDVYSFGVLVFEVIKGNHPRDFFSIN------- 811 (848)
Q Consensus 745 kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~P~~~~~~~------- 811 (848)
||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||......
T Consensus 240 kl~DfG~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~ 318 (365)
T 2y7j_A 240 RLSDFGFSCHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM 318 (365)
T ss_dssp EECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred EEEecCcccccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 999999998876433 3355789999999999863 35788999999999999999999998542210
Q ss_pred ----------ccccchhhhhhhhhcCCCCCCCCCCcccccceeeccC
Q 038003 812 ----------FSSFSNMIIDVNKILDPRLPTPSPSVMDYGGCHFMLR 848 (848)
Q Consensus 812 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (848)
.......+.++...+-..-|..+|...+...+.|+.|
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r 365 (365)
T 2y7j_A 319 EGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365 (365)
T ss_dssp HTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred hCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence 0122222344444444555777788777777777654
No 130
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.6e-35 Score=323.05 Aligned_cols=202 Identities=24% Similarity=0.443 Sum_probs=165.2
Q ss_pred hcCCcccceeccCCceeEEEEEcC----CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCe
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP----SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPH 673 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 673 (848)
.++|++.+.||+|+||.||+|.+. ++..||||+++... .....+.+.+|++++++++||||+++++++.+.+.
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 120 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY---TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCc
Confidence 357999999999999999999764 57789999987642 33456779999999999999999999999999999
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
.++||||+++|+|.++++.. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 121 VMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 99999999999999999754 34689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCc---ccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 754 FVGPHSSNW---TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 754 ~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
......... ....+++.|+|||++.+..+++++|||||||++|||++ |+.||..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~ 253 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTT
T ss_pred ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCC
Confidence 775432211 22345678999999999999999999999999999998 9999854
No 131
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.3e-35 Score=310.61 Aligned_cols=202 Identities=32% Similarity=0.477 Sum_probs=174.4
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
+.++|++.+.||+|+||.||+|... ++..||+|++...... .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY 85 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccc-hhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEE
Confidence 3567999999999999999999654 6789999998665322 1233567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||||+++++|.+++... ..+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++...
T Consensus 86 lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 86 LILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 999999999999988654 5688999999999999999999999 9999999999999999999999999998665
Q ss_pred CCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 756 GPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 756 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus 160 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 209 (279)
T 3fdn_A 160 PSS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209 (279)
T ss_dssp ----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred Ccc--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC
Confidence 432 23456789999999999998899999999999999999999999864
No 132
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.1e-34 Score=310.65 Aligned_cols=200 Identities=28% Similarity=0.446 Sum_probs=168.8
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
.++|.+.+.||+|+||.||+|.+. ..+|+|+++... ......+.+.+|++++++++||||+++++++. .+..++|
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv 109 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIV 109 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCC--CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEE
Confidence 467999999999999999999865 458999886542 23455678899999999999999999999875 4568999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||+++++|.+++... ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 110 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred EecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 9999999999998654 35689999999999999999999999 999999999999999999999999999986543
Q ss_pred C--CCCcccccccccccCccccc---cCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 758 H--SSNWTEFAGTFGYAAPEIAY---TMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 758 ~--~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
. ........||+.|+|||++. +..++.++|||||||++|||+||+.||..
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~ 239 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH 239 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 2 22234567999999999986 56688899999999999999999999864
No 133
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=4.6e-35 Score=325.24 Aligned_cols=195 Identities=26% Similarity=0.339 Sum_probs=161.0
Q ss_pred cCCccc-ceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHH-hcCCCCcccceEEEeec----C
Q 038003 599 DDFDEK-FCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLAL-KEIRHRNNVKFHGFCYN----G 671 (848)
Q Consensus 599 ~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l-~~l~hp~iv~l~~~~~~----~ 671 (848)
++|.+. +.||+|+||+||+|... +++.||||+++.. ..+.+|++++ +..+||||+++++++.. .
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~ 131 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 131 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc---------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence 457766 68999999999999654 7899999998532 3456788876 44589999999999875 5
Q ss_pred CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC---CCCEEEee
Q 038003 672 PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSD 748 (848)
Q Consensus 672 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~D 748 (848)
...|+||||+++|+|.+++... ....+++..+..|+.||+.||.|||+. +|+||||||+||+++. ++.+||+|
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred cEEEEEEEeCCCCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEe
Confidence 5789999999999999999764 234689999999999999999999999 9999999999999997 78999999
Q ss_pred ccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 749 FGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 749 fG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
||+++..... ......+||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 208 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 265 (400)
T 1nxk_A 208 FGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 265 (400)
T ss_dssp CTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCC
Confidence 9999876542 233557889999999999999999999999999999999999999864
No 134
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.9e-35 Score=313.17 Aligned_cols=239 Identities=21% Similarity=0.218 Sum_probs=186.9
Q ss_pred cCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCCeeEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~l 676 (848)
++|++.+.||+|+||+||+|.+. +++.||||++..... ..........|+..+.++ +||||++++++|.+.+..++
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR--GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC--SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc--ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 57999999999999999999765 799999999765431 223344555666665555 99999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+ +++|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 135 v~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 99999 66888887654 24689999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccccc-c-----------ccccchhhhhhhh
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSI-N-----------FSSFSNMIIDVNK 824 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~-~-----------~~~~~~~~~~~~~ 824 (848)
... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... . ...+...+.++..
T Consensus 209 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 286 (311)
T 3p1a_A 209 TAG-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLV 286 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHH
T ss_pred cCC-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHH
Confidence 432 2345679999999999876 789999999999999999999665432111 0 1123344444555
Q ss_pred hcCCCCCCCCCCcccccceeecc
Q 038003 825 ILDPRLPTPSPSVMDYGGCHFML 847 (848)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~ 847 (848)
.+-..-|..||...+.....|+.
T Consensus 287 ~~L~~dP~~Rpt~~ell~hp~~~ 309 (311)
T 3p1a_A 287 MMLEPDPKLRATAEALLALPVLR 309 (311)
T ss_dssp HHSCSSTTTSCCHHHHHTSGGGS
T ss_pred HHcCCChhhCcCHHHHHhCcccc
Confidence 55555677778877777776664
No 135
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.4e-34 Score=314.26 Aligned_cols=176 Identities=26% Similarity=0.401 Sum_probs=148.3
Q ss_pred CcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeE
Q 038003 359 NFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYL 438 (848)
Q Consensus 359 ~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 438 (848)
.+++|+.|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.+++..+ +..+++|++|
T Consensus 153 ~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L 226 (347)
T 4fmz_A 153 NMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSL 226 (347)
T ss_dssp TCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEE
T ss_pred hCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEE
Confidence 33344444444444433222 6678899999999999985544 8899999999999999996655 8899999999
Q ss_pred eccCcccCCCCCCcccCccccceeccccCcCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCccc
Q 038003 439 DLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLS 518 (848)
Q Consensus 439 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 518 (848)
++++|++++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|++++. +.+..+++|++|++++|+++
T Consensus 227 ~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 227 KIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred EccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCC
Confidence 999999996654 89999999999999999864 5789999999999999999875 56899999999999999999
Q ss_pred CCCcchhccccCceeecCCCCccCCCCC
Q 038003 519 DFIPRCFEEMRSLSCIDISYNELHGPIP 546 (848)
Q Consensus 519 ~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 546 (848)
+..+..|..+++|+.|++++|++++..|
T Consensus 301 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 301 NEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp GGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred CcChhHhhccccCCEEEccCCccccccC
Confidence 9999999999999999999999998666
No 136
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=5e-35 Score=307.28 Aligned_cols=201 Identities=27% Similarity=0.465 Sum_probs=177.7
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
.++|++.+.||+|+||.||+|+++++..||+|+++... ...+++.+|++++++++||||+++++++.+....++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-----MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-----BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-----CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEE
Confidence 46799999999999999999998888899999987642 2356789999999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||+++++|.++++.. ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+.....
T Consensus 82 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 82 TEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp EECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred EEccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 9999999999998654 34589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCC-cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 758 HSSN-WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 758 ~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
.... .....+++.|+|||++.+..+++++||||+|+++|||+| |+.||+..
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 209 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY 209 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcccc
Confidence 3321 123456778999999998889999999999999999999 99998643
No 137
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=7e-35 Score=309.08 Aligned_cols=242 Identities=25% Similarity=0.336 Sum_probs=189.8
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|.+.+.||+|+||.||+|.. .++..+|+|++.... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 97 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR---SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYI 97 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG---CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc---cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEE
Confidence 35699999999999999999965 478999999987754 23446778999999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeee---CCCCCEEEeeccCc
Q 038003 677 VCEYLDRGSLARILGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL---DSNFEAHVSDFGIA 752 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfG~~ 752 (848)
||||+++++|.+++.... ....+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||++
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 999999999998875431 235689999999999999999999999 99999999999999 45678999999999
Q ss_pred cccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcccccc----------------ccccc
Q 038003 753 KFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSIN----------------FSSFS 816 (848)
Q Consensus 753 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~----------------~~~~~ 816 (848)
....... ......|++.|+|||++. ..++.++||||||+++|||+||+.||...... ...+.
T Consensus 175 ~~~~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (285)
T 3is5_A 175 ELFKSDE-HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLT 252 (285)
T ss_dssp CC-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCC
T ss_pred eecCCcc-cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCC
Confidence 8765432 234567899999999876 46889999999999999999999998543211 01123
Q ss_pred hhhhhhhhhcCCCCCCCCCCcccccceeecc
Q 038003 817 NMIIDVNKILDPRLPTPSPSVMDYGGCHFML 847 (848)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (848)
..+.++...+-..-|..||...+.....|+.
T Consensus 253 ~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~ 283 (285)
T 3is5_A 253 PQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283 (285)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHHTSGGGG
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCHHhh
Confidence 3334444444445566677777766666654
No 138
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=319.40 Aligned_cols=200 Identities=23% Similarity=0.376 Sum_probs=164.7
Q ss_pred cCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
++|.+.+.||+|+||+||+|... +++.||+|++...... .....+.+|++++++++||||+++++++.+.+..++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEE
Confidence 57999999999999999999765 7899999998654311 1112345799999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||+++ +|.+++... ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 79 FEYLDK-DLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp EECCSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred eccccc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 999985 888887654 34688999999999999999999999 999999999999999999999999999987665
Q ss_pred CCCCcccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 758 HSSNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 758 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.........||+.|+|||++.+ ..++.++||||+||++|||+||+.||..
T Consensus 153 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 203 (324)
T 3mtl_A 153 PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPG 203 (324)
T ss_dssp ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 4444456678999999999876 5679999999999999999999999864
No 139
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=7e-35 Score=316.18 Aligned_cols=203 Identities=26% Similarity=0.372 Sum_probs=171.8
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD--DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS--SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC--CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 467999999999999999999665 68999999986543 223445667899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||++++++.++.... ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||.++...
T Consensus 102 v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 102 VFEFVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp EEECCSEEHHHHHHHST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEecCCcchHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 99999999998886544 4689999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCcccccccccccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
..........|++.|+|||++.+. .++.++||||+||++|||+||+.||...
T Consensus 176 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (331)
T 4aaa_A 176 APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 544444567899999999998875 6899999999999999999999998643
No 140
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.7e-35 Score=317.81 Aligned_cols=249 Identities=33% Similarity=0.502 Sum_probs=227.9
Q ss_pred CCCcEEeccCCcccc--cccccccCCCCCcEEEccc-cCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccE
Q 038003 79 PHLANLNLSFNLFFG--NIPLQIGNLSKLQYLDLGS-NQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDK 155 (848)
Q Consensus 79 ~~l~~L~l~~n~~~~--~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 155 (848)
.+++.|+|++|.++| .+|..|+++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|+.+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578999999999999 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccc-cccccccccccccccCcccccCCcccceeeccccC
Q 038003 156 LALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLK-SLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNS 234 (848)
Q Consensus 156 L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~ 234 (848)
|+|++|.+++.+|..++++++|++|++++|++++.+|..++.++ +|++|+|++|++++.+|..+..++ |+.|++++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999999999999999999999999999999999999998 999999999999999999999987 9999999999
Q ss_pred CCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCc
Q 038003 235 LSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHS 314 (848)
Q Consensus 235 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 314 (848)
+++.+|..+..+++|+.|++++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|++++|+++|.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9988899999999999999999999877665 788899999999999999889999998888988888888888877742
Q ss_pred cceeeccccCCCCccccccCCCCCccEEEccCCc
Q 038003 315 IERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNN 348 (848)
Q Consensus 315 l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 348 (848)
..+++|+.|++++|+
T Consensus 288 -------------------~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 288 -------------------GNLQRFDVSAYANNK 302 (313)
T ss_dssp -------------------TTGGGSCGGGTCSSS
T ss_pred -------------------ccccccChHHhcCCC
Confidence 345677777777777
No 141
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.3e-36 Score=325.93 Aligned_cols=204 Identities=25% Similarity=0.378 Sum_probs=174.7
Q ss_pred hcCCcccceeccCCceeEEEEEc----CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCC
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL----PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGP 672 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~ 672 (848)
.++|++.+.||+|+||.||+|+. .+++.||||+++...........+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46799999999999999999976 478999999997654322233445567899999999 6999999999999999
Q ss_pred eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCc
Q 038003 673 HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIA 752 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~ 752 (848)
..++||||+++++|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 999999999999999998654 4688999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC-CCcccccccccccCcccccc--CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 753 KFVGPHS-SNWTEFAGTFGYAAPEIAYT--MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 753 ~~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+.+.... ......+||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~ 264 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV 264 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 8764322 22234679999999999985 3478899999999999999999999864
No 142
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.3e-35 Score=313.33 Aligned_cols=203 Identities=26% Similarity=0.428 Sum_probs=172.0
Q ss_pred hcCCcccceeccCCceeEEEEEc-----CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC-
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-----PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG- 671 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~- 671 (848)
.++|++.+.||+|+||+||+|++ .+++.||||++... .....+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 84 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 46799999999999999999973 36889999998754 345567789999999999999999999998653
Q ss_pred -CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 672 -PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 672 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
...++||||+++++|.++++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 85 RRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp HTSCEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred CCceEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCc
Confidence 4689999999999999999754 24589999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCC---CcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcccc
Q 038003 751 IAKFVGPHSS---NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFS 809 (848)
Q Consensus 751 ~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~ 809 (848)
+++....... ......+++.|+|||++.+..+++++||||||+++|||+||..||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~ 221 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 221 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCCh
Confidence 9987754322 1223456778999999999999999999999999999999999986543
No 143
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.6e-35 Score=326.87 Aligned_cols=204 Identities=26% Similarity=0.410 Sum_probs=176.0
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|.+.+.||+|+||.||+|.+. +++.||||+++... .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 188 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL---PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY 188 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS---CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcE
Confidence 3467999999999999999999775 78999999987542 2334556889999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||||+++|+|.++++.. ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 189 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~ 263 (377)
T 3cbl_A 189 IVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREE 263 (377)
T ss_dssp EEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceec
Confidence 999999999999998643 34688999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCCc--ccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 756 GPHSSNW--TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 756 ~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
....... ....+++.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 264 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~ 319 (377)
T 3cbl_A 264 ADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL 319 (377)
T ss_dssp TTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred CCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 4321111 11235678999999998889999999999999999999 99998643
No 144
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.9e-35 Score=318.04 Aligned_cols=199 Identities=18% Similarity=0.223 Sum_probs=174.6
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCCeeE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~ 675 (848)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++++ +||||+++++++...+..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 81 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS------RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA 81 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC------SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc------chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE
Confidence 46799999999999999999965 578999999986542 123477899999999 9999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCC-----EEEeecc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE-----AHVSDFG 750 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-----~kl~DfG 750 (848)
+||||+ +++|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||
T Consensus 82 lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg 155 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155 (330)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred EEEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence 999999 89999998754 35789999999999999999999999 9999999999999998887 9999999
Q ss_pred CccccCCCCCC-------cccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 751 IAKFVGPHSSN-------WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 751 ~~~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
+++.+...... .....||+.|+|||++.+..+++++|||||||++|||+||+.||...
T Consensus 156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~ 220 (330)
T 2izr_A 156 LAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGL 220 (330)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred cceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccc
Confidence 99876443221 24568999999999999999999999999999999999999998753
No 145
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.6e-35 Score=322.31 Aligned_cols=201 Identities=26% Similarity=0.424 Sum_probs=162.9
Q ss_pred hhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC-CCcccceEEEeecCC--
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-HRNNVKFHGFCYNGP-- 672 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~-- 672 (848)
..++|++.+.||+|+||.||+|.+ .+++.||||++.... ......+.+.+|+.+++.+. ||||+++++++...+
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF--QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC----CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc--cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 357899999999999999999965 579999999986542 23455677889999999997 999999999997544
Q ss_pred eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCc
Q 038003 673 HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIA 752 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~ 752 (848)
..|+||||+++ +|.++++. ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||++
T Consensus 85 ~~~lv~e~~~~-~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 85 DVYLVFDYMET-DLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp CEEEEEECCSE-EHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecccCc-CHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 78999999985 89888854 3588899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCC---------------------CCCcccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 753 KFVGPH---------------------SSNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 753 ~~~~~~---------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+.+... .......+||+.|+|||++.+ ..++.++||||+||++|||+||+.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 233 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence 875321 112244689999999999886 5689999999999999999999999853
No 146
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.4e-35 Score=316.31 Aligned_cols=202 Identities=32% Similarity=0.454 Sum_probs=171.7
Q ss_pred hhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC----
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP---- 672 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~---- 672 (848)
..++|++.+.||+|+||+||+|++. ++.||||++.... .......+|+.++++++||||+++++++.+..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDV 95 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCc
Confidence 4568999999999999999999875 7899999986542 33445667899999999999999999998754
Q ss_pred eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCC-------CCCeEEcCCCCCCeeeCCCCCEE
Q 038003 673 HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC-------LPSIIHRDISSKNVLLDSNFEAH 745 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~-------~~~ivH~Dlk~~NIll~~~~~~k 745 (848)
..++||||+++|+|.++++.. .+++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+|
T Consensus 96 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k 171 (322)
T 3soc_A 96 DLWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171 (322)
T ss_dssp EEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred eEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence 469999999999999999643 4899999999999999999999761 23899999999999999999999
Q ss_pred EeeccCccccCCCCC--CcccccccccccCcccccc-----CCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 746 VSDFGIAKFVGPHSS--NWTEFAGTFGYAAPEIAYT-----MRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 746 l~DfG~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
|+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~ 241 (322)
T 3soc_A 172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241 (322)
T ss_dssp ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSC
T ss_pred EccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence 999999987654332 2234679999999999886 35677899999999999999999998643
No 147
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=8.3e-35 Score=306.16 Aligned_cols=204 Identities=29% Similarity=0.464 Sum_probs=163.6
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
.++|++.+.||+|+||.||+|.+. ++.||||+++...........+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 467999999999999999999875 8899999987764333344567789999999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC--------CCCEEEeec
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS--------NFEAHVSDF 749 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~--------~~~~kl~Df 749 (848)
|||+++++|.++++. ..+++..+..++.|++.||+|||++..++|+||||||+||+++. ++.+||+||
T Consensus 85 ~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999999853 46889999999999999999999991112999999999999986 678999999
Q ss_pred cCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 750 GIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 750 G~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
|.++....... ....|++.|+|||++.+..+++++||||||+++|+|+||+.||...
T Consensus 161 g~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 217 (271)
T 3dtc_A 161 GLAREWHRTTK--MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI 217 (271)
T ss_dssp CC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred Ccccccccccc--cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99987654322 3457899999999999988999999999999999999999998643
No 148
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.5e-34 Score=309.55 Aligned_cols=200 Identities=27% Similarity=0.420 Sum_probs=179.6
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|+..+.||+|+||.||+|.. .+++.||+|++.... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 97 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWI 97 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT---CSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccc---cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence 35699999999999999999965 578999999987653 23456778999999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++++|.++++. ..+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||+|||.+....
T Consensus 98 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 98 IMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp EEECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred EEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecC
Confidence 9999999999999854 4688999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
..........|++.|+|||++.+..++.++||||||+++|||+||+.||..
T Consensus 171 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 221 (303)
T 3a7i_A 171 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 221 (303)
T ss_dssp TTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCC
Confidence 544444567799999999999998999999999999999999999999864
No 149
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3.7e-35 Score=317.89 Aligned_cols=203 Identities=23% Similarity=0.345 Sum_probs=165.1
Q ss_pred HhhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCee
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 674 (848)
...++|++.+.||+|+||+||+|.. .+++.||||+++.... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE--EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc--ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 3456899999999999999999964 4789999999976532 223345678999999999999999999999999999
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeee-----CCCCCEEEeec
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL-----DSNFEAHVSDF 749 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll-----~~~~~~kl~Df 749 (848)
++||||+++ +|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||++ +.++.+||+||
T Consensus 109 ~lv~e~~~~-~L~~~~~~~---~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df 181 (329)
T 3gbz_A 109 HLIFEYAEN-DLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDF 181 (329)
T ss_dssp EEEEECCSE-EHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred EEEEecCCC-CHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcC
Confidence 999999985 999988655 4588999999999999999999999 99999999999999 45556999999
Q ss_pred cCccccCCCCCCcccccccccccCccccccCC-CCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 750 GIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 750 G~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
|+++.............||+.|+|||++.+.. ++.++|||||||++|||+||+.||..
T Consensus 182 g~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 240 (329)
T 3gbz_A 182 GLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPG 240 (329)
T ss_dssp THHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 99988765444455667899999999998754 79999999999999999999999854
No 150
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.6e-34 Score=312.56 Aligned_cols=210 Identities=22% Similarity=0.324 Sum_probs=177.5
Q ss_pred HHHHHHhhcCCccc-ceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEE
Q 038003 591 HEEIIKATDDFDEK-FCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGF 667 (848)
Q Consensus 591 ~~~~~~~~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~ 667 (848)
........++|.+. +.||+|+||.||+|... +++.||+|++..... .......+.+|+.+++.+ +||||++++++
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR--GQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET--TEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 33444556678877 88999999999999655 799999999977542 234467789999999999 56999999999
Q ss_pred eecCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC---CCCE
Q 038003 668 CYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS---NFEA 744 (848)
Q Consensus 668 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~ 744 (848)
+.+.+..++||||+++|+|.+++... ....+++..+..++.|++.||+|||++ ||+||||||+||+++. ++.+
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~ 173 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDI 173 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCE
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcE
Confidence 99999999999999999999998654 335689999999999999999999999 9999999999999998 7899
Q ss_pred EEeeccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 745 HVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 745 kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
||+|||+++...... ......|++.|+|||++.+..+++++|||||||++|||+||+.||..
T Consensus 174 kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (327)
T 3lm5_A 174 KIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVG 235 (327)
T ss_dssp EECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999998875432 23456799999999999999999999999999999999999999854
No 151
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=6.3e-35 Score=317.94 Aligned_cols=198 Identities=30% Similarity=0.450 Sum_probs=171.9
Q ss_pred cCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
++|+..+.||+|+||+||+|.. .+++.||||++...... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEcccccc-chHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 4589999999999999999965 57899999998764321 223456788999999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||+. |++.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99998 4787777532 25688999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCcccccccccccCccccc---cCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 758 HSSNWTEFAGTFGYAAPEIAY---TMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 758 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
. ....||+.|+|||++. +..++.++|||||||++|||+||+.||..
T Consensus 207 ~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 255 (348)
T 1u5q_A 207 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 255 (348)
T ss_dssp B----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred C----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2 3457999999999985 46689999999999999999999999854
No 152
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=8e-35 Score=308.41 Aligned_cols=202 Identities=25% Similarity=0.437 Sum_probs=175.1
Q ss_pred hhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
..++|++.+.||+|+||+||+|.+.++..||+|+++... ...+++.+|++++++++||||+++++++.+.+..++
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-----MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-----CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEE
Confidence 346799999999999999999999888899999987642 234678999999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.++...
T Consensus 97 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 97 ITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp EECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred EEeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 99999999999999763 34689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-CcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 757 PHSS-NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 757 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
.... ......+++.|+|||++.+..+++++||||+|+++|||+| |+.||...
T Consensus 172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~ 225 (283)
T 3gen_A 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 225 (283)
T ss_dssp CHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred ccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 3221 1123456788999999998899999999999999999999 99998643
No 153
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.4e-34 Score=323.67 Aligned_cols=242 Identities=24% Similarity=0.306 Sum_probs=182.6
Q ss_pred hhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCC----chhHHHHHHHHHHHhcCCCCcccceEEEeecC
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGN----MADHDEFLNEVLALKEIRHRNNVKFHGFCYNG 671 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~ 671 (848)
..++|.+.+.||+|+||.||+|.. .+++.||||++........ ......+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 457899999999999999999965 4789999999976543211 1122347899999999999999999999754
Q ss_pred CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC---CEEEee
Q 038003 672 PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF---EAHVSD 748 (848)
Q Consensus 672 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~kl~D 748 (848)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred CceEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 5689999999999999988654 5689999999999999999999999 999999999999997544 599999
Q ss_pred ccCccccCCCCCCcccccccccccCcccccc---CCCCccchhhhHHHHHHHHHhCCCCCccccccc-------------
Q 038003 749 FGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT---MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINF------------- 812 (848)
Q Consensus 749 fG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~------------- 812 (848)
||+++..... ......+||+.|+|||++.+ ..++.++|||||||++|||+||+.||.......
T Consensus 286 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~ 364 (419)
T 3i6u_A 286 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 364 (419)
T ss_dssp SSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCC
T ss_pred cccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCC
Confidence 9999887543 23355789999999999863 567889999999999999999999986432211
Q ss_pred -----cccchhhhhhhhhcCCCCCCCCCCcccccceeec
Q 038003 813 -----SSFSNMIIDVNKILDPRLPTPSPSVMDYGGCHFM 846 (848)
Q Consensus 813 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (848)
..+...+.++...+-..-|..+|...+...+.|+
T Consensus 365 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~ 403 (419)
T 3i6u_A 365 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 403 (419)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred CchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCccc
Confidence 1122333334444444456666666666655554
No 154
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.4e-34 Score=306.67 Aligned_cols=201 Identities=25% Similarity=0.364 Sum_probs=171.5
Q ss_pred CCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEEE
Q 038003 600 DFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVC 678 (848)
Q Consensus 600 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV~ 678 (848)
+|.....||+|+||.||+|.+ .++..||||++... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 98 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER----DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM 98 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC----CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC----chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEE
Confidence 455566899999999999965 57889999998664 2344577899999999999999999999999999999999
Q ss_pred eccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC-CCCEEEeeccCccccCC
Q 038003 679 EYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS-NFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 679 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~kl~DfG~~~~~~~ 757 (848)
||+++++|.++++.......+++..+..++.||+.||+|||++ ||+||||||+||+++. ++.+||+|||.+.....
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 99 EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp ECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred EeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999999997654445677888999999999999999999 9999999999999987 89999999999988765
Q ss_pred CCCCcccccccccccCccccccCC--CCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 758 HSSNWTEFAGTFGYAAPEIAYTMR--ATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 758 ~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.........|++.|+|||++.+.. ++.++||||||+++|||+||+.||..
T Consensus 176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 227 (295)
T 2clq_A 176 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227 (295)
T ss_dssp -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred CCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence 444345567899999999987643 78899999999999999999999864
No 155
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.1e-34 Score=312.54 Aligned_cols=200 Identities=23% Similarity=0.340 Sum_probs=168.0
Q ss_pred hcCCccc-ceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCCee
Q 038003 598 TDDFDEK-FCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 598 ~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~ 674 (848)
.++|++. +.||+|+||.||+|... +++.||||++... .....+.+.+|++++.++ +||||+++++++.+.+..
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~ 86 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ----PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRF 86 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC----SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC----cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 4568874 78999999999999754 7899999998764 234467788999999885 799999999999999999
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCC---EEEeeccC
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDFGI 751 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~DfG~ 751 (848)
++||||+++++|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 160 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDL 160 (316)
T ss_dssp EEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred EEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence 9999999999999998654 4688999999999999999999999 9999999999999998776 99999999
Q ss_pred ccccCCCCC-------CcccccccccccCcccccc-----CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 752 AKFVGPHSS-------NWTEFAGTFGYAAPEIAYT-----MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 752 ~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+........ .....+||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 228 (316)
T 2ac3_A 161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228 (316)
T ss_dssp CC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcc
Confidence 976542211 1223568999999999875 5578999999999999999999999864
No 156
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=9.3e-35 Score=308.06 Aligned_cols=201 Identities=28% Similarity=0.434 Sum_probs=177.4
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||.||+|... ++..||+|++...... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE-KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccc-hHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 367999999999999999999665 6788999998765322 12335678899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++++|.+++... ..+++..+..++.|++.||.|||++ ||+||||||+||+++.++.+||+|||.+....
T Consensus 92 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp EECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 99999999999998654 4688999999999999999999999 99999999999999999999999999997664
Q ss_pred CCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.. ......|++.|+|||++.+..++.++||||||+++|+|+||+.||..
T Consensus 166 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 214 (284)
T 2vgo_A 166 SL--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214 (284)
T ss_dssp SS--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cc--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCC
Confidence 32 23456789999999999998899999999999999999999999864
No 157
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=8.4e-35 Score=328.97 Aligned_cols=198 Identities=25% Similarity=0.360 Sum_probs=166.6
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC-----
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG----- 671 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~----- 671 (848)
.++|++.+.||+|+||+||+|.. .+++.||||++.... ......+++.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG--GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc--cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 57899999999999999999965 478999999997652 1334567788999999999999999999999654
Q ss_pred -CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 672 -PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 672 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
...|+||||++++ +.+.+.. .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~~-l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDAN-LCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSEE-HHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCCC-HHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 4579999999874 6666643 388899999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+++..... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 210 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g 265 (464)
T 3ttj_A 210 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265 (464)
T ss_dssp CC-----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eeeecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99877543 234557899999999999999999999999999999999999999854
No 158
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.4e-35 Score=312.67 Aligned_cols=205 Identities=24% Similarity=0.349 Sum_probs=168.6
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|++.+.||+|+||.||+|... +++.||+|++...... .....+.+.+|+.++++++||||+++++++...+..+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSS-DPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGG-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCccccc-CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 3578999999999999999999764 7889999999765422 3344577899999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||||+++++|.++++.. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 111 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 999999999999998654 4688999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC-CcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 756 GPHSS-NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 756 ~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
..... ......|++.|+|||++.+..++.++||||||+++|||+||+.||...
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 238 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD 238 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc
Confidence 54321 223467899999999999988999999999999999999999998653
No 159
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.4e-35 Score=318.01 Aligned_cols=201 Identities=22% Similarity=0.331 Sum_probs=169.9
Q ss_pred hhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCC--CcccceEEEeecCCee
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH--RNNVKFHGFCYNGPHS 674 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--p~iv~l~~~~~~~~~~ 674 (848)
..++|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|++++++++| |||+++++++.+....
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 84 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 84 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc--chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEE
Confidence 3467999999999999999999888899999999876532 33455778999999999976 9999999999999999
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccc
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~ 754 (848)
++||| +.+++|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+||+++ ++.+||+|||+++.
T Consensus 85 ~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~ 156 (343)
T 3dbq_A 85 YMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQ 156 (343)
T ss_dssp EEEEC-CCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred EEEEe-CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccc
Confidence 99999 5677999999754 5688999999999999999999999 999999999999997 67899999999987
Q ss_pred cCCCCC--CcccccccccccCcccccc-----------CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 755 VGPHSS--NWTEFAGTFGYAAPEIAYT-----------MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 755 ~~~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
...... .....+||+.|+|||++.+ ..+++++|||||||++|||+||+.||..
T Consensus 157 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 222 (343)
T 3dbq_A 157 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222 (343)
T ss_dssp C------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence 754332 1235679999999999865 5688899999999999999999999864
No 160
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=319.94 Aligned_cols=204 Identities=27% Similarity=0.412 Sum_probs=177.3
Q ss_pred hcCCcccceeccCCceeEEEEEcC--------CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEe
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP--------SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFC 668 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~ 668 (848)
.++|.+.+.||+|+||.||+|.+. .+..||||+++... .....+.+.+|+++++++ +||||+++++++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc---CHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 467999999999999999999652 33579999987653 344567789999999999 999999999999
Q ss_pred ecCCeeEEEEeccCCCCHHhHhcCCCC-------------cccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCC
Q 038003 669 YNGPHSFLVCEYLDRGSLARILGDDVT-------------AKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKN 735 (848)
Q Consensus 669 ~~~~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~N 735 (848)
.+.+..++||||+++|+|.++++.... ...+++..+..++.||+.||+|||++ +|+||||||+|
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 221 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARN 221 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcce
Confidence 999999999999999999999865421 24589999999999999999999999 99999999999
Q ss_pred eeeCCCCCEEEeeccCccccCCCCC--CcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 736 VLLDSNFEAHVSDFGIAKFVGPHSS--NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 736 Ill~~~~~~kl~DfG~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
|+++.++.+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~ 296 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999987654322 2234567889999999999999999999999999999999 9999864
No 161
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.7e-34 Score=305.83 Aligned_cols=203 Identities=26% Similarity=0.388 Sum_probs=175.6
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCC--chhHHHHHHHHHHHhcCCCCcccceEEEeecCCee
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGN--MADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 674 (848)
.++|++.+.||+|+||.||+|... +++.||+|+++....... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 356999999999999999999765 789999999877543221 12467889999999999999999999999999999
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC----CEEEeecc
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF----EAHVSDFG 750 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~DfG 750 (848)
++||||+++++|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 9999999999999998643 4689999999999999999999999 999999999999998877 89999999
Q ss_pred CccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.+....... ......|++.|+|||++.+..++.++||||||+++|+|+||+.||..
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 213 (283)
T 3bhy_A 158 IAHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 213 (283)
T ss_dssp TCEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCC
Confidence 998775432 23456789999999999988899999999999999999999999864
No 162
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=9.3e-35 Score=332.22 Aligned_cols=201 Identities=27% Similarity=0.439 Sum_probs=178.5
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||.||+|... +++.||||++...... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-BSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcc-cchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 467999999999999999999765 8999999999765432 23456788999999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeee---CCCCCEEEeeccCcc
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL---DSNFEAHVSDFGIAK 753 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfG~~~ 753 (848)
||||+.+|+|.+++... ..+++..+..++.||+.||+|||++ ||+||||||+||++ +.++.+||+|||+++
T Consensus 104 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EECCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 99999999999988655 5689999999999999999999999 99999999999999 567899999999998
Q ss_pred ccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 754 FVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 754 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.+.... .....+||+.|+|||++.+ .+++++||||+||++|+|+||+.||..
T Consensus 178 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~ 229 (484)
T 3nyv_A 178 HFEASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG 229 (484)
T ss_dssp HBCCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred Eccccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCC
Confidence 875433 3455689999999999876 689999999999999999999999864
No 163
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-34 Score=316.09 Aligned_cols=206 Identities=25% Similarity=0.322 Sum_probs=169.6
Q ss_pred HhhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCC-chhHHHHHHHHHHHhcCCCCcccceEEEeecCCe
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGN-MADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPH 673 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 673 (848)
...++|++.+.||+|+||.||+|... +++.||||++........ ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999775 689999999976432211 1112467899999999999999999999999999
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
.++||||+++ ++.+++... ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eEEEEEcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 9999999987 888888654 24578888999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCcccccccccccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 754 FVGPHSSNWTEFAGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 754 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.............||+.|+|||++.+. .++.++|||||||++|||++|..||..
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~ 215 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG 215 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 876555455567899999999998764 478999999999999999999999754
No 164
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.2e-34 Score=316.19 Aligned_cols=199 Identities=26% Similarity=0.283 Sum_probs=175.2
Q ss_pred HhhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC-----CCcccceEEEee
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-----HRNNVKFHGFCY 669 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----hp~iv~l~~~~~ 669 (848)
...++|++.+.||+|+||+||+|.+ .+++.||||+++.. ....+.+..|+++++.++ ||||+++++++.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~ 106 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM 106 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence 3457899999999999999999966 47899999998643 244566778999999886 999999999999
Q ss_pred cCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC---------
Q 038003 670 NGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS--------- 740 (848)
Q Consensus 670 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~--------- 740 (848)
..+..++||||+ +++|.+++... ....+++..+..++.||+.||+|||++ ||+||||||+||+++.
T Consensus 107 ~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~ 181 (360)
T 3llt_A 107 YYDHMCLIFEPL-GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLIT 181 (360)
T ss_dssp ETTEEEEEECCC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEE
T ss_pred ECCeeEEEEcCC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccc
Confidence 999999999999 88999998755 224588999999999999999999999 9999999999999975
Q ss_pred ----------------CCCEEEeeccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCC
Q 038003 741 ----------------NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804 (848)
Q Consensus 741 ----------------~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P 804 (848)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p 258 (360)
T 3llt_A 182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLL 258 (360)
T ss_dssp EECTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred hhcccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCC
Confidence 789999999999875432 2446789999999999999999999999999999999999999
Q ss_pred Ccc
Q 038003 805 RDF 807 (848)
Q Consensus 805 ~~~ 807 (848)
|..
T Consensus 259 f~~ 261 (360)
T 3llt_A 259 FRT 261 (360)
T ss_dssp CCC
T ss_pred CCC
Confidence 854
No 165
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.3e-35 Score=323.84 Aligned_cols=205 Identities=24% Similarity=0.400 Sum_probs=177.4
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC--ee
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP--HS 674 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~ 674 (848)
.++|.+.+.||+|+||+||+|.+. +++.||||++..... ....+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence 467999999999999999999665 689999999976542 234567789999999999999999999998755 77
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeee----CCCCCEEEeecc
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL----DSNFEAHVSDFG 750 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~kl~DfG 750 (848)
++||||+++|+|.++++.......+++..+..++.||+.||+|||++ ||+||||||+||++ +.++.+||+|||
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 99999999999999998764444589999999999999999999999 99999999999999 778889999999
Q ss_pred CccccCCCCCCcccccccccccCcccccc--------CCCCccchhhhHHHHHHHHHhCCCCCcccc
Q 038003 751 IAKFVGPHSSNWTEFAGTFGYAAPEIAYT--------MRATEKYDVYSFGVLVFEVIKGNHPRDFFS 809 (848)
Q Consensus 751 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~DiwSlG~il~elltg~~P~~~~~ 809 (848)
+++...... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||....
T Consensus 162 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~ 227 (396)
T 4eut_A 162 AARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227 (396)
T ss_dssp GCEECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTT
T ss_pred CceEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 998775432 2345679999999999865 567889999999999999999999986433
No 166
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.9e-34 Score=306.21 Aligned_cols=202 Identities=32% Similarity=0.523 Sum_probs=171.8
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchh---HHHHHHHHHHHhcCCCCcccceEEEeecCCe
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMAD---HDEFLNEVLALKEIRHRNNVKFHGFCYNGPH 673 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 673 (848)
.++|++.+.||+|+||+||+|.+ .+++.||+|++........... .+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 46799999999999999999966 4789999999876543222111 167889999999999999999999997665
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEcCCCCCCeeeCCCCC-----EEE
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS--IIHRDISSKNVLLDSNFE-----AHV 746 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~-----~kl 746 (848)
++||||+++++|.+++... ...+++..+..++.|++.||+|||++ + |+||||||+||+++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 6999999999998888654 34689999999999999999999999 8 999999999999988776 999
Q ss_pred eeccCccccCCCCCCcccccccccccCccccc--cCCCCccchhhhHHHHHHHHHhCCCCCcccc
Q 038003 747 SDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY--TMRATEKYDVYSFGVLVFEVIKGNHPRDFFS 809 (848)
Q Consensus 747 ~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~DiwSlG~il~elltg~~P~~~~~ 809 (848)
+|||+++.... ......|++.|+|||++. ...+++++||||+||++|||+||+.||....
T Consensus 171 ~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 232 (287)
T 4f0f_A 171 ADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232 (287)
T ss_dssp CCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred CCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence 99999985433 334567999999999984 4557889999999999999999999986433
No 167
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=8.1e-35 Score=317.51 Aligned_cols=206 Identities=25% Similarity=0.432 Sum_probs=177.2
Q ss_pred HhhcCCcccceeccCCceeEEEEEcC------CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEee
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAELP------SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCY 669 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~ 669 (848)
...++|++.+.||+|+||.||+|.+. +++.||||+++... .....+.+.+|++++++++||||+++++++.
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 34578999999999999999999764 34789999997653 3345677899999999999999999999999
Q ss_pred cCCeeEEEEeccCCCCHHhHhcCCCC---------------------cccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEE
Q 038003 670 NGPHSFLVCEYLDRGSLARILGDDVT---------------------AKELGWNRRINVIKGVANALSYLHHDCLPSIIH 728 (848)
Q Consensus 670 ~~~~~~lV~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH 728 (848)
+.+..++||||+++|+|.++++.... ...+++.++..++.||+.||.|||++ +|+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 99999999999999999999865311 25689999999999999999999999 9999
Q ss_pred cCCCCCCeeeCCCCCEEEeeccCccccCCCC--CCcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCC
Q 038003 729 RDISSKNVLLDSNFEAHVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPR 805 (848)
Q Consensus 729 ~Dlk~~NIll~~~~~~kl~DfG~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~ 805 (848)
|||||+||+++.++.+||+|||+++...... .......+++.|+|||++.+..++.++||||||+++|||+| |+.||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 9999999999999999999999998764322 12234567899999999998899999999999999999999 99998
Q ss_pred cc
Q 038003 806 DF 807 (848)
Q Consensus 806 ~~ 807 (848)
..
T Consensus 278 ~~ 279 (343)
T 1luf_A 278 YG 279 (343)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 168
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.4e-34 Score=321.97 Aligned_cols=200 Identities=24% Similarity=0.373 Sum_probs=169.3
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC-----
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG----- 671 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~----- 671 (848)
.++|++.+.||+|+||.||+|.+. +++.||||++.... ......+++.+|++++++++||||+++++++...
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT--TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh--cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 467999999999999999999654 68899999997642 2345567889999999999999999999999776
Q ss_pred CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccC
Q 038003 672 PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGI 751 (848)
Q Consensus 672 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 751 (848)
...|+||||+++ +|.++++.. ..+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~-~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 103 DELYIVLEIADS-DLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp CCEEEEEECCSE-EHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEecCCc-CHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCC
Confidence 578999999875 999998754 5689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC----------------------CcccccccccccCcccc-ccCCCCccchhhhHHHHHHHHHhCCCCCc
Q 038003 752 AKFVGPHSS----------------------NWTEFAGTFGYAAPEIA-YTMRATEKYDVYSFGVLVFEVIKGNHPRD 806 (848)
Q Consensus 752 ~~~~~~~~~----------------------~~~~~~g~~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltg~~P~~ 806 (848)
++....... .....+||+.|+|||++ .+..++.++||||+||++|||+||..||.
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 987754321 23567899999999986 56668999999999999999998766553
No 169
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-34 Score=326.67 Aligned_cols=195 Identities=25% Similarity=0.373 Sum_probs=156.1
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeec-----C
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYN-----G 671 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-----~ 671 (848)
.++|++.+.||+|+||+||+|.+. +++.||||++.... ......+++.+|+++++.++||||+++++++.. .
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 129 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF--EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKF 129 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh--cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccC
Confidence 468999999999999999999654 78999999986542 234556788999999999999999999999944 3
Q ss_pred CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccC
Q 038003 672 PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGI 751 (848)
Q Consensus 672 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 751 (848)
...|+||||+. ++|.++++.. ..+++..+..++.||+.||+|||++ |||||||||+|||++.++.+||+|||+
T Consensus 130 ~~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 130 DELYVVLEIAD-SDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp CCEEEEECCCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccc-cchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeeccccc
Confidence 57899999985 5899988654 5689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCC---------------------------CCcccccccccccCcccc-ccCCCCccchhhhHHHHHHHHHhC
Q 038003 752 AKFVGPHS---------------------------SNWTEFAGTFGYAAPEIA-YTMRATEKYDVYSFGVLVFEVIKG 801 (848)
Q Consensus 752 ~~~~~~~~---------------------------~~~~~~~g~~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltg 801 (848)
++...... ......+||+.|+|||++ .+..++.++|||||||++|||+||
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 98764321 123456789999999986 466799999999999999999994
No 170
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.5e-34 Score=330.29 Aligned_cols=200 Identities=27% Similarity=0.425 Sum_probs=174.6
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||+||+|... +++.||||++...... ......+.+|++++++++||||+++++++.+....++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc--chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 467999999999999999999665 7999999998765432 2346778999999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeC---CCCCEEEeeccCcc
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD---SNFEAHVSDFGIAK 753 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~kl~DfG~~~ 753 (848)
||||+++|+|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+||+++ .++.+||+|||+++
T Consensus 99 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 99999999999888654 5689999999999999999999999 999999999999995 45679999999998
Q ss_pred ccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 754 FVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 754 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
...... .....+||+.|+|||++.+ .+++++||||+||++|+|+||+.||..
T Consensus 173 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~ 224 (486)
T 3mwu_A 173 CFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG 224 (486)
T ss_dssp TBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ECCCCC-ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 775432 3355689999999999876 589999999999999999999999853
No 171
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.9e-34 Score=308.97 Aligned_cols=239 Identities=26% Similarity=0.377 Sum_probs=190.5
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|++.+.||+|+||.||+|... +++.||+|++.... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW 100 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence 4567999999999999999999665 68999999986542 3456889999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||||+++++|.+++... ...+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||+|||.+...
T Consensus 101 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 175 (314)
T 3com_A 101 IVMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175 (314)
T ss_dssp EEEECCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence 999999999999998632 35688999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcccccc----------------ccccchhh
Q 038003 756 GPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSIN----------------FSSFSNMI 819 (848)
Q Consensus 756 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~----------------~~~~~~~~ 819 (848)
...........|++.|+|||++.+..++.++||||||+++|+|+||+.||...... ...+...+
T Consensus 176 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 255 (314)
T 3com_A 176 TDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNF 255 (314)
T ss_dssp BTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHH
T ss_pred hhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHH
Confidence 65444445567899999999999988999999999999999999999998643211 01122333
Q ss_pred hhhhhhcCCCCCCCCCCcccccceeec
Q 038003 820 IDVNKILDPRLPTPSPSVMDYGGCHFM 846 (848)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (848)
.++...+-..-|..+|.+.+...+.|+
T Consensus 256 ~~li~~~l~~dp~~Rpt~~~ll~~~~~ 282 (314)
T 3com_A 256 TDFVKQCLVKSPEQRATATQLLQHPFV 282 (314)
T ss_dssp HHHHHHHTCSCTTTSCCHHHHTTSHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHhCHHH
Confidence 444444444456666666665555443
No 172
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.6e-34 Score=329.84 Aligned_cols=242 Identities=22% Similarity=0.347 Sum_probs=190.7
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCC---------chhHHHHHHHHHHHhcCCCCcccceEE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGN---------MADHDEFLNEVLALKEIRHRNNVKFHG 666 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~---------~~~~~~~~~E~~~l~~l~hp~iv~l~~ 666 (848)
..++|.+.+.||+|+||+||+|... +++.||+|++........ ....+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3577999999999999999999664 688999999976543211 134567889999999999999999999
Q ss_pred EeecCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC---C
Q 038003 667 FCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF---E 743 (848)
Q Consensus 667 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~ 743 (848)
++.+....++||||+++|+|.+++... ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++ .
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 999999999999999999999988654 5689999999999999999999999 999999999999998776 6
Q ss_pred EEEeeccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcccccc------------
Q 038003 744 AHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSIN------------ 811 (848)
Q Consensus 744 ~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~------------ 811 (848)
+||+|||+++..... ......+||+.|+|||++.+ .+++++||||+||++|+|++|+.||......
T Consensus 188 ~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~ 265 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYY 265 (504)
T ss_dssp EEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred EEEEECCCCEEcCCC-CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC
Confidence 999999999887543 33455689999999999874 6899999999999999999999998643211
Q ss_pred -----ccccchhhhhhhhhcCCCCCCCCCCcccccceeec
Q 038003 812 -----FSSFSNMIIDVNKILDPRLPTPSPSVMDYGGCHFM 846 (848)
Q Consensus 812 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (848)
...+...+.++...+-..-|..||...+.....|+
T Consensus 266 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~ 305 (504)
T 3q5i_A 266 FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWI 305 (504)
T ss_dssp CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred CCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhh
Confidence 11233334444444444445566666555555444
No 173
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.3e-35 Score=321.15 Aligned_cols=200 Identities=27% Similarity=0.388 Sum_probs=175.8
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||.||+|.+. ++..||+|++.... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 108 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 108 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEE
Confidence 467999999999999999999665 78999999987653 34456778999999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++++|.++++.. ..+++..+..++.|++.||+|||+.+ ||+||||||+||+++.++.+||+|||++....
T Consensus 109 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 109 CMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp EECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EEECCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 99999999999998654 46889999999999999999999832 89999999999999999999999999997653
Q ss_pred CCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.. ......|++.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 184 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 184 DS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp HH--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred cc--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 22 22346789999999999999999999999999999999999999864
No 174
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.1e-35 Score=311.98 Aligned_cols=199 Identities=30% Similarity=0.452 Sum_probs=166.3
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
.++|++.+.||+|+||+||+|.+. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++|
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv 77 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLV 77 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEE
Confidence 357899999999999999999875 788999998543 345778999999999999999999999874 47999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCC-EEEeeccCccccC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE-AHVSDFGIAKFVG 756 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-~kl~DfG~~~~~~ 756 (848)
|||+++++|.++++.......+++..+..++.|+++||+|||+.+..||+||||||+||+++.++. +||+|||.+....
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~ 157 (307)
T 2eva_A 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 157 (307)
T ss_dssp EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----
T ss_pred EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccc
Confidence 999999999999987644456888999999999999999999932129999999999999998886 7999999997654
Q ss_pred CCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
.. .....|++.|+|||++.+..+++++||||||+++|||+||+.||+..
T Consensus 158 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 206 (307)
T 2eva_A 158 TH---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred cc---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence 32 23456899999999999989999999999999999999999998643
No 175
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.6e-35 Score=325.43 Aligned_cols=239 Identities=14% Similarity=0.140 Sum_probs=180.1
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHH---HHHhcCCCCcccceE-------E
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEV---LALKEIRHRNNVKFH-------G 666 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~---~~l~~l~hp~iv~l~-------~ 666 (848)
.++|++.+.||+|+||+||+|.+ .+++.||||++...... .....+.+.+|+ +++++++|||||+++ +
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C-CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeecccc-chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 46799999999999999999976 47999999999765322 234567789999 556666899999998 6
Q ss_pred EeecCC-----------------eeEEEEeccCCCCHHhHhcCCC----CcccCCHHHHHHHHHHHHHHHHHHhhCCCCC
Q 038003 667 FCYNGP-----------------HSFLVCEYLDRGSLARILGDDV----TAKELGWNRRINVIKGVANALSYLHHDCLPS 725 (848)
Q Consensus 667 ~~~~~~-----------------~~~lV~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ 725 (848)
++.+.+ ..|+||||+ +|+|.++++... ....+++..+..|+.||+.||+|||++ |
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 665543 278999999 579999986431 112344578889999999999999999 9
Q ss_pred eEEcCCCCCCeeeCCCCCEEEeeccCccccCCCCCCcccccccccccCccccccC-----------CCCccchhhhHHHH
Q 038003 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTM-----------RATEKYDVYSFGVL 794 (848)
Q Consensus 726 ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~DiwSlG~i 794 (848)
|+||||||+|||++.++.+||+|||+++.... .....+| +.|+|||++.+. .+++++|||||||+
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 99999999999999999999999999986433 3345677 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCcccccc---------ccccchhhhhhhhhcCCCCCCCCCCcccccceee
Q 038003 795 VFEVIKGNHPRDFFSIN---------FSSFSNMIIDVNKILDPRLPTPSPSVMDYGGCHF 845 (848)
Q Consensus 795 l~elltg~~P~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (848)
+|||+||+.||...... ...+...+.++...+-..-|..+|...+.....|
T Consensus 303 l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 362 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPE 362 (377)
T ss_dssp HHHHHHSSCCC------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHH
T ss_pred HHHHHHCCCCCcccccccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChH
Confidence 99999999998643321 1122233333333344444555565555544443
No 176
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.5e-35 Score=319.67 Aligned_cols=204 Identities=27% Similarity=0.384 Sum_probs=174.2
Q ss_pred hcCCcccceeccCCceeEEEEEcC------CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP------SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG 671 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~ 671 (848)
.++|++.+.||+|+||+||+|.+. ++..||||+++... .......+.+|+.++++++||||+++++++.+.
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc---ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 467999999999999999999743 46689999986542 334556788999999999999999999999999
Q ss_pred CeeEEEEeccCCCCHHhHhcCCC----CcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC---CE
Q 038003 672 PHSFLVCEYLDRGSLARILGDDV----TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF---EA 744 (848)
Q Consensus 672 ~~~~lV~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~ 744 (848)
...++||||+++|+|.++++... ....+++.++..++.||+.||+|||++ ||+||||||+||+++.++ .+
T Consensus 147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceE
Confidence 99999999999999999986432 224689999999999999999999999 999999999999999555 59
Q ss_pred EEeeccCccccCCCC--CCcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 745 HVSDFGIAKFVGPHS--SNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 745 kl~DfG~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
||+|||+++...... .......||+.|+|||++.+..+++++|||||||++|||+| |+.||..
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~ 289 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 289 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999997552211 22234567899999999999899999999999999999998 9999864
No 177
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.4e-34 Score=320.28 Aligned_cols=200 Identities=22% Similarity=0.327 Sum_probs=170.4
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC--CCcccceEEEeecCCeeE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR--HRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~l~~~~~~~~~~~ 675 (848)
.++|++.+.||+|+||+||+|...+++.||||++..... .....+.+.+|++++++++ ||||+++++++...+..+
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~ 132 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 132 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc--cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEE
Confidence 356999999999999999999888899999999876532 3445678899999999996 599999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||| +.+++|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+|||++ ++.+||+|||+++.+
T Consensus 133 lv~E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~ 204 (390)
T 2zmd_A 133 MVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 204 (390)
T ss_dssp EEEE-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC
T ss_pred EEEe-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccc
Confidence 9999 5678999998755 4688889999999999999999999 999999999999995 589999999999877
Q ss_pred CCCCC--CcccccccccccCcccccc-----------CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 756 GPHSS--NWTEFAGTFGYAAPEIAYT-----------MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 756 ~~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
..... .....+||+.|+|||++.+ ..+++++|||||||++|||+||+.||..
T Consensus 205 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 269 (390)
T 2zmd_A 205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269 (390)
T ss_dssp ---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence 54332 1245679999999999865 3688899999999999999999999864
No 178
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=5.4e-35 Score=321.08 Aligned_cols=210 Identities=25% Similarity=0.372 Sum_probs=177.6
Q ss_pred HHHHhhcCCcccceeccCCceeEEEEEc------CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceE
Q 038003 593 EIIKATDDFDEKFCIGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFH 665 (848)
Q Consensus 593 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~ 665 (848)
......++|++.+.||+|+||.||+|.+ .+++.||||+++... .....+.+.+|+++++++ +||||++++
T Consensus 16 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 16 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC---CHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 3444568899999999999999999963 356889999997643 334557789999999999 899999999
Q ss_pred EEeecCC-eeEEEEeccCCCCHHhHhcCCCC-------------------------------------------------
Q 038003 666 GFCYNGP-HSFLVCEYLDRGSLARILGDDVT------------------------------------------------- 695 (848)
Q Consensus 666 ~~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------- 695 (848)
+++.+.+ ..++||||+++|+|.++++....
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 9998755 48999999999999999875421
Q ss_pred --------------cccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCCCCC-
Q 038003 696 --------------AKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSS- 760 (848)
Q Consensus 696 --------------~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~~~~- 760 (848)
...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 11288999999999999999999999 999999999999999999999999999987644332
Q ss_pred -CcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 761 -NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 761 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
......||+.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 299 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 299 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence 2234567899999999999999999999999999999999 99998643
No 179
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.2e-34 Score=306.38 Aligned_cols=202 Identities=25% Similarity=0.389 Sum_probs=173.1
Q ss_pred cCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
++|++.+.||+|+||.||+|... +++.||||+++.... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc--chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence 57999999999999999999765 789999999876532 123346788999999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||++ ++|.+++... ....+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp EECCS-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred EEccc-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 99998 5999988654 224588899999999999999999999 999999999999999999999999999987755
Q ss_pred CCCCcccccccccccCccccccCC-CCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 758 HSSNWTEFAGTFGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 758 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.........+++.|+|||++.+.. ++.++|||||||++|||+||+.||..
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 206 (299)
T 2r3i_A 156 PVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPG 206 (299)
T ss_dssp CSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 444445567899999999998765 78999999999999999999999864
No 180
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.5e-34 Score=327.81 Aligned_cols=200 Identities=28% Similarity=0.402 Sum_probs=170.2
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||+||+|... ++..||+|++...... ....+.+.+|+++++.++||||+++++++.+....++
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS--TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC--chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 456999999999999999999765 7899999999775432 2335678899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCC---CCEEEeeccCcc
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSN---FEAHVSDFGIAK 753 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~kl~DfG~~~ 753 (848)
||||+++|+|.+++... ..+++..+..++.||+.||+|||++ ||+||||||+||+++.. +.+||+|||+++
T Consensus 114 v~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 114 VMECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 99999999999888654 5688999999999999999999999 99999999999999764 559999999998
Q ss_pred ccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 754 FVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 754 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
...... .....+||+.|+|||++.+ .+++++||||+||++|+|++|+.||..
T Consensus 188 ~~~~~~-~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~ 239 (494)
T 3lij_A 188 VFENQK-KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGG 239 (494)
T ss_dssp ECBTTB-CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ECCCCc-cccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 775432 3355689999999999864 689999999999999999999999854
No 181
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=7.5e-35 Score=329.50 Aligned_cols=201 Identities=24% Similarity=0.423 Sum_probs=175.5
Q ss_pred hhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
..++|++.+.||+|+||.||+|.++++..||||+++... ...+.+.+|++++++++||||+++++++. .+..++
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l 259 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI 259 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-----ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence 356789999999999999999998888999999987642 34678999999999999999999999986 567899
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++|+|.++++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 260 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp EECCCTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred EEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 99999999999999754 224688899999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-CcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 757 PHSS-NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 757 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
.... ......+++.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~ 388 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 388 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC
Confidence 3211 1123446789999999998899999999999999999999 9999864
No 182
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.3e-34 Score=309.69 Aligned_cols=205 Identities=26% Similarity=0.404 Sum_probs=177.4
Q ss_pred hhcCCcccceeccCCceeEEEEEc------CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeec
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYN 670 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~ 670 (848)
..++|.+.+.||+|+||.||+|.. .++..||||+++... .....+.+.+|++++++++||||+++++++.+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 97 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ 97 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCceeeEEEEEec
Confidence 356799999999999999999965 245789999987543 34556778999999999999999999999999
Q ss_pred CCeeEEEEeccCCCCHHhHhcCCCC---------------------cccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEc
Q 038003 671 GPHSFLVCEYLDRGSLARILGDDVT---------------------AKELGWNRRINVIKGVANALSYLHHDCLPSIIHR 729 (848)
Q Consensus 671 ~~~~~lV~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~ 729 (848)
.+..++||||+++++|.+++..... ...+++..+..++.||+.||+|||++ +|+||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~ 174 (314)
T 2ivs_A 98 DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHR 174 (314)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECC
T ss_pred CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccc
Confidence 9999999999999999999875422 23488999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCCEEEeeccCccccCCCCCC--cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCc
Q 038003 730 DISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRD 806 (848)
Q Consensus 730 Dlk~~NIll~~~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~ 806 (848)
||||+||+++.++.+||+|||+++........ .....+++.|+|||++.+..+++++|||||||++|||+| |+.||.
T Consensus 175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 254 (314)
T 2ivs_A 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254 (314)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999877543322 233456789999999998889999999999999999999 999986
Q ss_pred c
Q 038003 807 F 807 (848)
Q Consensus 807 ~ 807 (848)
.
T Consensus 255 ~ 255 (314)
T 2ivs_A 255 G 255 (314)
T ss_dssp T
T ss_pred C
Confidence 4
No 183
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.3e-35 Score=324.39 Aligned_cols=205 Identities=20% Similarity=0.304 Sum_probs=168.8
Q ss_pred hhcCCcccceeccCCceeEEEEEcCC------CCEEEEEEcccccccCC-------chhHHHHHHHHHHHhcCCCCcccc
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELPS------GDIVAVKKFNSQLLSGN-------MADHDEFLNEVLALKEIRHRNNVK 663 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~-------~~~~~~~~~E~~~l~~l~hp~iv~ 663 (848)
..++|++.+.||+|+||.||+|.+.. ++.||||++........ ......+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 45689999999999999999997754 47899999865421100 001123445667788889999999
Q ss_pred eEEEeecC----CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeC
Q 038003 664 FHGFCYNG----PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD 739 (848)
Q Consensus 664 l~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~ 739 (848)
+++++... ...++||||+ +++|.+++... ...+++..+..|+.||+.||+|||++ +|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 99998764 4589999999 99999998653 35689999999999999999999999 999999999999999
Q ss_pred --CCCCEEEeeccCccccCCCCC-------CcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 740 --SNFEAHVSDFGIAKFVGPHSS-------NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 740 --~~~~~kl~DfG~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.++.+||+|||+++.+..... ......||+.|+|||++.+..+++++|||||||++|||+||+.||..
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~ 263 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED 263 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 889999999999987643221 11335699999999999999999999999999999999999999974
No 184
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-34 Score=314.89 Aligned_cols=206 Identities=24% Similarity=0.391 Sum_probs=174.4
Q ss_pred hhcCCcccceeccCCceeEEEEEc------CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEee
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCY 669 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~ 669 (848)
..++|++.+.||+|+||.||+|.+ .++..||||++.... .....+.+.+|+++++++ +||||+++++++.
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 457899999999999999999975 245689999997543 233456789999999999 8999999999999
Q ss_pred cCCeeEEEEeccCCCCHHhHhcCCCC--------------------cccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEc
Q 038003 670 NGPHSFLVCEYLDRGSLARILGDDVT--------------------AKELGWNRRINVIKGVANALSYLHHDCLPSIIHR 729 (848)
Q Consensus 670 ~~~~~~lV~e~~~~gsL~~~l~~~~~--------------------~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~ 729 (848)
..+..++||||+++|+|.+++..... ...+++..+..++.||+.||+|||++ ||+||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~ 196 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHR 196 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 99999999999999999999976422 13478999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCCEEEeeccCccccCCCCCC--cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCc
Q 038003 730 DISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRD 806 (848)
Q Consensus 730 Dlk~~NIll~~~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~ 806 (848)
||||+||+++.++.+||+|||++......... .....||+.|+|||++.+..+++++|||||||++|||+| |+.||.
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 99999999999999999999999876543322 233557889999999998899999999999999999998 999986
Q ss_pred cc
Q 038003 807 FF 808 (848)
Q Consensus 807 ~~ 808 (848)
..
T Consensus 277 ~~ 278 (344)
T 1rjb_A 277 GI 278 (344)
T ss_dssp TC
T ss_pred cC
Confidence 53
No 185
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-34 Score=313.99 Aligned_cols=197 Identities=26% Similarity=0.403 Sum_probs=166.9
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC----
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP---- 672 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~---- 672 (848)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+++.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 101 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 101 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence 46799999999999999999965 579999999986642 13345677889999999999999999999997653
Q ss_pred --eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 673 --HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 673 --~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
..|+||||+ +++|.++++. ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeee
Confidence 469999999 7899998864 3588899999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCCcccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSSNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+++..... ....++|+.|+|||++.+ ..++.++||||+||++|||+||+.||..
T Consensus 174 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 228 (367)
T 1cm8_A 174 LARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228 (367)
T ss_dssp TCEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccccccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 99876432 345678999999999887 6789999999999999999999999864
No 186
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.3e-34 Score=312.94 Aligned_cols=206 Identities=25% Similarity=0.396 Sum_probs=160.1
Q ss_pred hhcCCcccceeccCCceeEEEEEcCCCC----EEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELPSGD----IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 672 (848)
..++|++.+.||+|+||.||+|.+.... .||||+++.... .....+.+.+|++++++++||||+++++++....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII--ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc--CHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 4567999999999999999999765432 799999976532 2345678999999999999999999999998776
Q ss_pred ee------EEEEeccCCCCHHhHhcCCC---CcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCC
Q 038003 673 HS------FLVCEYLDRGSLARILGDDV---TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE 743 (848)
Q Consensus 673 ~~------~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 743 (848)
.. ++||||+++|+|.+++.... ....+++..+..++.||+.||+|||++ ||+||||||+||+++.++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCC
Confidence 55 99999999999999885431 122589999999999999999999999 9999999999999999999
Q ss_pred EEEeeccCccccCCCCCC--cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 744 AHVSDFGIAKFVGPHSSN--WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 744 ~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
+||+|||+++........ .....+++.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~ 242 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG 242 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence 999999999876443221 223456789999999999999999999999999999999 9999864
No 187
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.1e-34 Score=303.98 Aligned_cols=202 Identities=26% Similarity=0.402 Sum_probs=169.4
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||.||+|.+. +++.||||++...... .....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIR-SLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecccccc-chhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 467999999999999999999765 7999999998765322 22345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++++|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+||+++.++.+||+|||.+....
T Consensus 89 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 99999999999998654 4688999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCcccccccccccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCcc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
... ......|++.|+|||++.+..+ ++++||||||+++|+|+||+.||+.
T Consensus 163 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 213 (276)
T 2h6d_A 163 DGE-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213 (276)
T ss_dssp C--------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCc-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 432 2344678999999999988765 6899999999999999999999864
No 188
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.5e-34 Score=307.94 Aligned_cols=199 Identities=26% Similarity=0.390 Sum_probs=173.7
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|.+.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP----AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYY 82 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc----ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEE
Confidence 3467999999999999999999764 79999999987642 223456889999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeee---CCCCCEEEeeccCc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL---DSNFEAHVSDFGIA 752 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfG~~ 752 (848)
+||||+++++|.+++... ..+++..+..++.|++.||.|||++ ||+||||||+||++ +.++.+||+|||.+
T Consensus 83 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~ 156 (304)
T 2jam_A 83 LVMQLVSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLS 156 (304)
T ss_dssp EEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred EEEEcCCCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence 999999999999988654 4688999999999999999999999 99999999999999 78899999999999
Q ss_pred cccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 753 KFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 753 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
...... ......|++.|+|||++.+..+++++||||+|+++|||+||+.||..
T Consensus 157 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 209 (304)
T 2jam_A 157 KMEQNG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE 209 (304)
T ss_dssp CCCCCB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eecCCC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 765432 23445789999999999998999999999999999999999999854
No 189
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4.6e-34 Score=310.16 Aligned_cols=204 Identities=26% Similarity=0.429 Sum_probs=175.7
Q ss_pred hcCCcccceeccCCceeEEEEEcC--------CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEe
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP--------SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFC 668 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~ 668 (848)
.++|++.+.||+|+||.||+|.+. ++..||||+++... .....+.+.+|+++++++ +||||+++++++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC---cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 467999999999999999999753 56789999987653 334567789999999999 899999999999
Q ss_pred ecCCeeEEEEeccCCCCHHhHhcCCCC-------------cccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCC
Q 038003 669 YNGPHSFLVCEYLDRGSLARILGDDVT-------------AKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKN 735 (848)
Q Consensus 669 ~~~~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~N 735 (848)
.+.+..++||||+++|+|.+++..... ...+++..+..++.||+.||+|||++ ||+||||||+|
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 187 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 187 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccce
Confidence 999999999999999999999976421 23488999999999999999999999 99999999999
Q ss_pred eeeCCCCCEEEeeccCccccCCCCCC--cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 736 VLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 736 Ill~~~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
|+++.++.+||+|||+++........ .....+++.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 188 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 262 (334)
T 2pvf_A 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262 (334)
T ss_dssp EEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred EEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCc
Confidence 99999999999999999876543321 233456789999999998889999999999999999999 9999864
No 190
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.9e-34 Score=310.34 Aligned_cols=206 Identities=24% Similarity=0.392 Sum_probs=178.1
Q ss_pred hhcCCcccceeccCCceeEEEEEc------CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEee
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCY 669 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~ 669 (848)
..++|++.+.||+|+||.||+|.+ .+++.||+|+++... .....+.+.+|+++++++ +||||+++++++.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch---hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence 346799999999999999999964 356789999987653 234567789999999999 9999999999999
Q ss_pred cCCeeEEEEeccCCCCHHhHhcCCCC---------------cccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCC
Q 038003 670 NGPHSFLVCEYLDRGSLARILGDDVT---------------AKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSK 734 (848)
Q Consensus 670 ~~~~~~lV~e~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~ 734 (848)
+.+..++||||+++|+|.+++..... ...+++..+..++.||+.||+|||++ ||+||||||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~ 174 (313)
T 1t46_A 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAAR 174 (313)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccc
Confidence 99999999999999999999865421 12589999999999999999999999 9999999999
Q ss_pred CeeeCCCCCEEEeeccCccccCCCCCC--cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 735 NVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 735 NIll~~~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
||+++.++.+||+|||.++........ .....+++.|+|||++.+..+++++||||||+++|||+| |+.||...
T Consensus 175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 251 (313)
T 1t46_A 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251 (313)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 999999999999999999877554332 123456789999999999899999999999999999999 99998653
No 191
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1e-33 Score=300.99 Aligned_cols=198 Identities=25% Similarity=0.341 Sum_probs=171.7
Q ss_pred cCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeec----CCe
Q 038003 599 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYN----GPH 673 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~----~~~ 673 (848)
+.|.+.+.||+|+||.||+|.+ .++..||+|++..... .....+.+.+|+.++++++||||+++++++.. ...
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh--CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCce
Confidence 4578888999999999999965 4788999999876532 23456778999999999999999999998865 356
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEcCCCCCCeeeC-CCCCEEEeecc
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS--IIHRDISSKNVLLD-SNFEAHVSDFG 750 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~--ivH~Dlk~~NIll~-~~~~~kl~DfG 750 (848)
.++||||+++++|.++++.. ..+++..+..++.||+.||.|||+. + |+||||||+||+++ .++.+||+|||
T Consensus 104 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg 177 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp EEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred EEEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence 89999999999999999654 5688999999999999999999999 8 99999999999997 78999999999
Q ss_pred CccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
++...... ......|++.|+|||++.+ .++.++||||+|+++|+|+||+.||..
T Consensus 178 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~ 231 (290)
T 1t4h_A 178 LATLKRAS--FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp GGGGCCTT--SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred Cccccccc--ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence 99765432 3345679999999998874 589999999999999999999999864
No 192
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=5e-34 Score=305.16 Aligned_cols=189 Identities=29% Similarity=0.484 Sum_probs=160.9
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhc--CCCCcccceEEEeec----C
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE--IRHRNNVKFHGFCYN----G 671 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~--l~hp~iv~l~~~~~~----~ 671 (848)
.++|++.+.||+|+||+||+|.+ +++.||||++... ..+.+.+|.+++.. ++||||+++++++.. .
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~ 78 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSS 78 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC
Confidence 46899999999999999999987 6899999998543 23445566666555 799999999998654 3
Q ss_pred CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEEcCCCCCCeeeCCCCC
Q 038003 672 PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH--------HDCLPSIIHRDISSKNVLLDSNFE 743 (848)
Q Consensus 672 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH--------~~~~~~ivH~Dlk~~NIll~~~~~ 743 (848)
...++||||+++|+|.++++. ..+++..+..++.||+.||+||| +. +|+||||||+||+++.++.
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSC
T ss_pred ceeEEehhhccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCC
Confidence 468999999999999999954 36899999999999999999999 77 9999999999999999999
Q ss_pred EEEeeccCccccCCCCCC----cccccccccccCccccccC------CCCccchhhhHHHHHHHHHhC
Q 038003 744 AHVSDFGIAKFVGPHSSN----WTEFAGTFGYAAPEIAYTM------RATEKYDVYSFGVLVFEVIKG 801 (848)
Q Consensus 744 ~kl~DfG~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltg 801 (848)
+||+|||+++........ .....||+.|+|||++.+. .+++++|||||||++|||+||
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg 219 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence 999999999876543322 1234799999999999876 456799999999999999999
No 193
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.1e-34 Score=325.34 Aligned_cols=197 Identities=29% Similarity=0.462 Sum_probs=171.2
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC-eeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP-HSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-~~~l 676 (848)
.++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 467899999999999999999875 7899999987542 3467899999999999999999999987665 7899
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++|+|.++++.. ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 265 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EEECCTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 99999999999999754 223478899999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
.. .....+++.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 341 ~~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~ 390 (450)
T 1k9a_A 341 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 390 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTS
T ss_pred cc---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 32 123367889999999999999999999999999999999 99998643
No 194
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.5e-34 Score=310.91 Aligned_cols=201 Identities=27% Similarity=0.434 Sum_probs=168.3
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCE----EEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDI----VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 672 (848)
.++|++.+.||+|+||+||+|.+. +++. ||+|++.... .....+.+.+|+.++++++||||+++++++. .+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~ 87 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS---GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GS 87 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT---SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BS
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc---cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CC
Confidence 357999999999999999999754 4554 7777765432 1223345678999999999999999999986 45
Q ss_pred eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCc
Q 038003 673 HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIA 752 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~ 752 (848)
..++||||+++|+|.+++... ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 88 ~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a 162 (325)
T 3kex_A 88 SLQLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVA 162 (325)
T ss_dssp SEEEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGG
T ss_pred ccEEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcc
Confidence 689999999999999998754 34688899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC--CcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 753 KFVGPHSS--NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 753 ~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
+....... ......|++.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 220 (325)
T 3kex_A 163 DLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG 220 (325)
T ss_dssp GGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccc
Confidence 98754332 2244567889999999998899999999999999999999 9999864
No 195
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4.7e-34 Score=308.45 Aligned_cols=241 Identities=25% Similarity=0.318 Sum_probs=185.2
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccC----CchhHHHHHHHHHHHhcCCCCcccceEEEeecCC
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSG----NMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 672 (848)
.++|.+.+.||+|+||.||+|... +++.||||++....... .......+.+|++++++++||||+++++++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 467999999999999999999654 68899999987653211 1122345789999999999999999999987665
Q ss_pred eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCC---EEEeec
Q 038003 673 HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE---AHVSDF 749 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~Df 749 (848)
.++||||+++++|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+||+++.++. +||+||
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred -eEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 89999999999999988654 5688999999999999999999999 9999999999999987664 999999
Q ss_pred cCccccCCCCCCcccccccccccCccccc---cCCCCccchhhhHHHHHHHHHhCCCCCccccccc--------------
Q 038003 750 GIAKFVGPHSSNWTEFAGTFGYAAPEIAY---TMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINF-------------- 812 (848)
Q Consensus 750 G~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~-------------- 812 (848)
|+++..... .......|++.|+|||++. +..++.++|||||||++|+|+||+.||.......
T Consensus 162 g~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 240 (322)
T 2ycf_A 162 GHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240 (322)
T ss_dssp TTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCC
T ss_pred ccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccC
Confidence 999877542 2223467899999999974 4568899999999999999999999986433211
Q ss_pred ----cccchhhhhhhhhcCCCCCCCCCCcccccceeec
Q 038003 813 ----SSFSNMIIDVNKILDPRLPTPSPSVMDYGGCHFM 846 (848)
Q Consensus 813 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (848)
..+...+.++...+-..-|..+|...+...+.|+
T Consensus 241 ~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~ 278 (322)
T 2ycf_A 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278 (322)
T ss_dssp HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCc
Confidence 1122233333333444445666666665555554
No 196
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2e-34 Score=308.43 Aligned_cols=203 Identities=24% Similarity=0.383 Sum_probs=170.4
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|++.+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 92 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 92 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC----CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEE
Confidence 3567999999999999999999765 6899999998664 2345678899999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||||+++++|.+++... ...+++..+..++.||+.||.|||+. ||+||||||+||+++.++.+||+|||++...
T Consensus 93 lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp EEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred EEEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 999999999999987643 24588999999999999999999999 9999999999999999999999999987643
Q ss_pred CCCCCCcccccccccccCccccc-----cCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 756 GPHSSNWTEFAGTFGYAAPEIAY-----TMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 756 ~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
...........|++.|+|||++. +..++.++||||||+++|+|+||+.||...
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 225 (302)
T 2j7t_A 168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225 (302)
T ss_dssp HHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC
Confidence 22111223457899999999983 566889999999999999999999998653
No 197
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.8e-34 Score=303.56 Aligned_cols=201 Identities=24% Similarity=0.421 Sum_probs=175.0
Q ss_pred hhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
..++|++.+.||+|+||.||+|...++..||+|++.... ...+.+.+|++++++++||||+++++++.+ +..++
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 84 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI 84 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-----ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEE
Confidence 456799999999999999999998888899999986542 345678999999999999999999999864 46899
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++++|.+++... ....+++..+..++.|++.||+|||++ ||+||||||+||++++++.+||+|||.+....
T Consensus 85 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 160 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 160 (279)
T ss_dssp EEECCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEecCCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccccccc
Confidence 99999999999999654 223689999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCC-cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 757 PHSSN-WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 757 ~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
..... .....+++.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 213 (279)
T 1qpc_A 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213 (279)
T ss_dssp SSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred CcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcc
Confidence 43221 233456789999999998889999999999999999999 9999864
No 198
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.6e-34 Score=303.04 Aligned_cols=202 Identities=26% Similarity=0.380 Sum_probs=162.8
Q ss_pred hhcCCcccceeccCCceeEEEEEcCC----CCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELPS----GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 672 (848)
..++|++.+.||+|+||.||+|.+.. +..||+|+++... .....+.+.+|+.++++++||||+++++++. .+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~ 88 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SS
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cC
Confidence 34679999999999999999997642 4569999986542 3345677899999999999999999999985 45
Q ss_pred eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCc
Q 038003 673 HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIA 752 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~ 752 (848)
..++||||+++++|.++++.. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 163 (281)
T 1mp8_A 89 PVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLS 163 (281)
T ss_dssp SCEEEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----
T ss_pred ccEEEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccc
Confidence 789999999999999998654 24688999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC-cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 753 KFVGPHSSN-WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 753 ~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
+........ .....+++.|+|||++.+..++.++||||||+++|||+| |..||..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~ 220 (281)
T 1mp8_A 164 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 220 (281)
T ss_dssp ---------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCc
Confidence 877543221 223456789999999998899999999999999999997 9999864
No 199
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.8e-34 Score=307.44 Aligned_cols=206 Identities=24% Similarity=0.327 Sum_probs=166.6
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||.||+|.. .+++.||+|++...... +....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLM-DAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhcc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 45799999999999999999965 57999999998764322 34456778999999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 677 VCEYLDRGSLARILGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
||||+++++|.+++.... ....+++..+..++.||+.||.|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999886421 234688999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 756 GPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 756 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
...........|++.|+|||++.+..++.++||||||+++|||+||+.||..
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 238 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 5544444556789999999999998899999999999999999999999854
No 200
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.4e-34 Score=304.54 Aligned_cols=195 Identities=23% Similarity=0.372 Sum_probs=169.8
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CC-------CEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEee
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SG-------DIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCY 669 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~ 669 (848)
.++|++.+.||+|+||+||+|... ++ ..||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 82 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA----HRNYSESFFEAASMMSKLSHKHLVLNYGVCV 82 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG----GGGGHHHHHHHHHHHHTSCCTTBCCEEEEEC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc----cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE
Confidence 467999999999999999999654 33 46999998654 2345678899999999999999999999999
Q ss_pred cCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCC------
Q 038003 670 NGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE------ 743 (848)
Q Consensus 670 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~------ 743 (848)
+.+..++||||+++++|.++++.. ...+++..+..++.||+.||.|||++ +|+||||||+||+++.++.
T Consensus 83 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 83 CGDENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp CTTCCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred eCCCCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccc
Confidence 999999999999999999999754 24488999999999999999999999 9999999999999998887
Q ss_pred --EEEeeccCccccCCCCCCcccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCC
Q 038003 744 --AHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPR 805 (848)
Q Consensus 744 --~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~ 805 (848)
+||+|||.+..... .....|++.|+|||++.+ ..+++++|||||||++|||+||..|+
T Consensus 158 ~~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~ 218 (289)
T 4fvq_A 158 PFIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP 218 (289)
T ss_dssp CEEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred ceeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence 99999999876532 234568899999999987 67899999999999999999965553
No 201
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.4e-34 Score=330.40 Aligned_cols=202 Identities=27% Similarity=0.469 Sum_probs=176.7
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
..+|++.+.||+|+||.||+|.++ ++..||||+++... ...+++.+|++++++++||||++++++|.+.+..++
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-----cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 456889999999999999999776 48899999987542 346789999999999999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++|+|.++++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 294 v~E~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 294 ITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999999999754 235688999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCC-cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 757 PHSSN-WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 757 ~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
..... .....+++.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~ 423 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence 33211 123445789999999998889999999999999999999 99998643
No 202
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=303.41 Aligned_cols=205 Identities=23% Similarity=0.348 Sum_probs=172.2
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEee--cCCee
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCY--NGPHS 674 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--~~~~~ 674 (848)
.++|++.+.||+|+||.||+|... +++.||+|+++...........+.+.+|++++++++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999764 789999999977644333445678899999999999999999999984 45688
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccc
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~ 754 (848)
++||||++++ +.+++... ....+++..+..++.||+.||.|||++ +|+||||||+||+++.++.+||+|||.+..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999986 66666543 235689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC--CCcccccccccccCccccccCC--CCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 755 VGPHS--SNWTEFAGTFGYAAPEIAYTMR--ATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 755 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
..... .......|++.|+|||++.+.. ++.++||||||+++|||+||+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence 65322 2223467899999999987644 37899999999999999999999864
No 203
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=6e-34 Score=302.39 Aligned_cols=201 Identities=23% Similarity=0.325 Sum_probs=172.1
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCCee
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~ 674 (848)
..++|++.+.||+|+||+||+|... +++.||+|++..... .......+.+|+..+..+ +||||+++++++.+.+..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~ 86 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA--GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM 86 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT--TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc--ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence 3467999999999999999999765 899999999876532 234456788999999999 999999999999999999
Q ss_pred EEEEeccCCCCHHhHhcCCCC-cccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCC------------
Q 038003 675 FLVCEYLDRGSLARILGDDVT-AKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSN------------ 741 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~------------ 741 (848)
++||||+++++|.++++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~ 163 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDE 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccc
Confidence 999999999999999865321 24589999999999999999999999 99999999999999844
Q ss_pred -------CCEEEeeccCccccCCCCCCcccccccccccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCc
Q 038003 742 -------FEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRD 806 (848)
Q Consensus 742 -------~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~ 806 (848)
..+||+|||.+...... ....|++.|+|||++.+. .+++++|||||||++|+|++|..|+.
T Consensus 164 ~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 232 (289)
T 1x8b_A 164 DDWASNKVMFKIGDLGHVTRISSP----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR 232 (289)
T ss_dssp ------CCCEEECCCTTCEETTCS----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred ccccCCceEEEEcccccccccCCc----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence 47999999999877543 234589999999998865 56789999999999999999998754
No 204
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.6e-34 Score=306.46 Aligned_cols=202 Identities=23% Similarity=0.389 Sum_probs=173.3
Q ss_pred hcCCcccceeccCCceeEEEEEc-----CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC-
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-----PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG- 671 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~- 671 (848)
.++|++.+.||+|+||.||+|.+ .+++.||+|++.... .....+.+.+|++++++++||||+++++++.+.
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc---cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC
Confidence 35588999999999999999973 468999999987653 234567789999999999999999999999876
Q ss_pred -CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 672 -PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 672 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
...++||||+++++|.++++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 171 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFG 171 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCT
T ss_pred CceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccc
Confidence 6689999999999999998543 24588999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCC---CcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSS---NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.+........ ......||+.|+|||++.+..++.++||||+|+++|||+||+.|+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 231 (302)
T 4e5w_A 172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSS 231 (302)
T ss_dssp TCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcc
Confidence 9988765432 12345678889999999998899999999999999999999999643
No 205
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.2e-34 Score=300.97 Aligned_cols=200 Identities=28% Similarity=0.434 Sum_probs=176.5
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
.++|++.+.||+|+||.||+|.+.+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEE
Confidence 46799999999999999999988888999999987653 2346789999999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||+++++|.++++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+.....
T Consensus 82 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp ECCCTTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EeCCCCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccc
Confidence 9999999999998654 24588999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 758 HSS-NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 758 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
... ......+++.|+|||++.+..+++++||||||+++|||+| |+.||..
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 208 (267)
T 3t9t_A 157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208 (267)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCC
Confidence 211 1123456789999999998889999999999999999999 8999864
No 206
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.5e-33 Score=308.41 Aligned_cols=202 Identities=24% Similarity=0.354 Sum_probs=171.4
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeec------
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYN------ 670 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------ 670 (848)
.++|++.+.||+|+||+||+|.. .+++.||||++...... ......+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS--SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc--ccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 46799999999999999999976 57999999998765322 2334567899999999999999999999987
Q ss_pred --CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEee
Q 038003 671 --GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSD 748 (848)
Q Consensus 671 --~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~D 748 (848)
.+..++||||+++ ++.+.+... ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred cCCceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEcc
Confidence 3468999999986 676666543 24589999999999999999999999 999999999999999999999999
Q ss_pred ccCccccCCCC----CCcccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 749 FGIAKFVGPHS----SNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 749 fG~~~~~~~~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
||+++.+.... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 231 (351)
T 3mi9_A 168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 231 (351)
T ss_dssp CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCC
Confidence 99998765221 22345678999999999876 4579999999999999999999999864
No 207
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.5e-34 Score=305.64 Aligned_cols=206 Identities=28% Similarity=0.458 Sum_probs=175.2
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEee--cCCee
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCY--NGPHS 674 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--~~~~~ 674 (848)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|++++++++||||+++++++. .....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence 467999999999999999999665 789999999876532 2345677899999999999999999999874 46689
Q ss_pred EEEEeccCCCCHHhHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHhhCCCCC-----eEEcCCCCCCeeeCCCCCEEEee
Q 038003 675 FLVCEYLDRGSLARILGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPS-----IIHRDISSKNVLLDSNFEAHVSD 748 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~-----ivH~Dlk~~NIll~~~~~~kl~D 748 (848)
++||||+++++|.+++.... ....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~d 159 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGD 159 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECC
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEec
Confidence 99999999999999986431 123589999999999999999999999 8 99999999999999999999999
Q ss_pred ccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 749 FGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 749 fG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
||.++.............|++.|+|||++.+..++.++||||||+++|+|+||+.||...
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 219 (279)
T 2w5a_A 160 FGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF 219 (279)
T ss_dssp CCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc
Confidence 999987755433334567899999999999888999999999999999999999998653
No 208
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.2e-33 Score=306.40 Aligned_cols=193 Identities=21% Similarity=0.330 Sum_probs=170.4
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC-CCcccceEEEeec--CCe
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-HRNNVKFHGFCYN--GPH 673 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~--~~~ 673 (848)
.++|++.+.||+|+||.||+|.. .+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ...
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 107 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 107 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc
Confidence 36799999999999999999964 57899999998643 3467889999999997 9999999999987 667
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC-CEEEeeccCc
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF-EAHVSDFGIA 752 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~kl~DfG~~ 752 (848)
.++||||+++++|.++++ .+++..+..++.||+.||+|||++ ||+||||||+||+++.++ .+||+|||++
T Consensus 108 ~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a 178 (330)
T 3nsz_A 108 PALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178 (330)
T ss_dssp EEEEEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eEEEEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCc
Confidence 899999999999999873 478889999999999999999999 999999999999999777 8999999999
Q ss_pred cccCCCCCCcccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 753 KFVGPHSSNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 753 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+...... ......|++.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 179 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~ 233 (330)
T 3nsz_A 179 EFYHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233 (330)
T ss_dssp EECCTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred eEcCCCC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 8775433 3345678999999999887 5689999999999999999999999843
No 209
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.5e-34 Score=311.13 Aligned_cols=201 Identities=24% Similarity=0.451 Sum_probs=166.3
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCE----EEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDI----VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 672 (848)
.++|++.+.||+|+||+||+|.+. +++. ||+|.+.... .....+++.+|++++++++||||+++++++.+..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC
Confidence 357999999999999999999754 4554 5777775432 2345678899999999999999999999998764
Q ss_pred eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCc
Q 038003 673 HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIA 752 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~ 752 (848)
.++|+||+++|+|.+++... ...+++..+..|+.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a 164 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHH
T ss_pred -eEEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcce
Confidence 78999999999999998754 25689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC--cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 753 KFVGPHSSN--WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 753 ~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
+........ .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||+.
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 222 (327)
T 3poz_A 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222 (327)
T ss_dssp HHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred eEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccC
Confidence 877543332 233456889999999999999999999999999999999 9999864
No 210
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=6.3e-34 Score=303.90 Aligned_cols=198 Identities=20% Similarity=0.263 Sum_probs=174.0
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCCeeE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~ 675 (848)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++.+ +|++++++++++.+....+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 82 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS------DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 82 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT------TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC------ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeE
Confidence 46799999999999999999975 578999999986542 223477899999999 8999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCC-----EEEeecc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE-----AHVSDFG 750 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-----~kl~DfG 750 (848)
+||||+ +++|.++++.. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++. +||+|||
T Consensus 83 lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 83 LVIDLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred EEEEec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 999999 99999999754 24589999999999999999999999 9999999999999987776 9999999
Q ss_pred CccccCCCCC-------CcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSS-------NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+++....... ......||+.|+|||++.+..+++++|||||||++|||+||+.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 220 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 220 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred cccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcch
Confidence 9987754322 12456799999999999999999999999999999999999999865
No 211
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.8e-34 Score=306.47 Aligned_cols=202 Identities=28% Similarity=0.472 Sum_probs=178.3
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|++.+.||+|+||.||+|.+. ++..||+|++... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-----STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence 4577999999999999999999765 5888999998653 345677899999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||||+++++|.++++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+...
T Consensus 86 ~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EEEECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEEEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 999999999999999754 235689999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCC-cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 756 GPHSSN-WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 756 ~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
...... .....+++.|+|||++.+..+++++||||||+++|+|+| |..||..
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~ 215 (288)
T 3kfa_A 162 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215 (288)
T ss_dssp CSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 543322 233456789999999998899999999999999999999 9999864
No 212
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.4e-34 Score=307.92 Aligned_cols=206 Identities=27% Similarity=0.412 Sum_probs=158.2
Q ss_pred HhhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCee
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~ 674 (848)
...++|++.+.||+|+||.||+|... +++.||||++..... ....+++.+|++++++++||||+++++++...+..
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 88 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL 88 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-------------------CCCCCCCTTBCCEEEEEESSSCE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCc
Confidence 34578999999999999999999764 789999999866432 23456788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHhHhcCC-----CCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeec
Q 038003 675 FLVCEYLDRGSLARILGDD-----VTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDF 749 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Df 749 (848)
++||||+++++|.+++... .....+++..+..++.||+.||.|||++ ||+||||||+||+++.++.+||+||
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 165 (303)
T 2vwi_A 89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADF 165 (303)
T ss_dssp EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCC
T ss_pred EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEec
Confidence 9999999999999988531 1235689999999999999999999999 9999999999999999999999999
Q ss_pred cCccccCCCCC-----CcccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 750 GIAKFVGPHSS-----NWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 750 G~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
|.+........ ......|++.|+|||++.+ ..++.++||||||+++|||+||+.||..
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 229 (303)
T 2vwi_A 166 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229 (303)
T ss_dssp HHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 99987643221 1234578999999999876 5689999999999999999999999865
No 213
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.5e-34 Score=312.43 Aligned_cols=203 Identities=19% Similarity=0.240 Sum_probs=166.3
Q ss_pred hcCCcccceeccCCceeEEEEEcC----CCCEEEEEEcccccccCC-------chhHHHHHHHHHHHhcCCCCcccceEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP----SGDIVAVKKFNSQLLSGN-------MADHDEFLNEVLALKEIRHRNNVKFHG 666 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~-------~~~~~~~~~E~~~l~~l~hp~iv~l~~ 666 (848)
.++|++.+.||+|+||.||+|.+. ++..+|||++........ ......+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467999999999999999999765 578899999876421100 001234667889999999999999999
Q ss_pred Eeec----CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC
Q 038003 667 FCYN----GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF 742 (848)
Q Consensus 667 ~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 742 (848)
++.. ....++||||+ +++|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 9987 67899999999 99999999765 3789999999999999999999999 999999999999998877
Q ss_pred --CEEEeeccCccccCCCC-------CCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 743 --EAHVSDFGIAKFVGPHS-------SNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 743 --~~kl~DfG~~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.+||+|||+++.+.... .......||+.|+|||++.+..+++++|||||||++|||+||+.||..
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 262 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ 262 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 99999999998764321 112446799999999999998999999999999999999999999954
No 214
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=9.6e-34 Score=305.34 Aligned_cols=198 Identities=26% Similarity=0.413 Sum_probs=172.7
Q ss_pred CcccceeccCCceeEEEEEcC-----CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC--Ce
Q 038003 601 FDEKFCIGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG--PH 673 (848)
Q Consensus 601 ~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~ 673 (848)
|++.+.||+|+||+||++.+. +++.||||+++... .....+.+.+|++++++++||||+++++++.+. ..
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA---GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc---ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 489999999999999988542 68889999997652 345567789999999999999999999999874 57
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
.++||||+++++|.+++... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||.+.
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccc
Confidence 89999999999999999654 488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---cccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 754 FVGPHSSN---WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 754 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
........ .....+++.|+|||++.+..++.++||||||+++|||+||+.||...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~ 240 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 240 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccccc
Confidence 87654321 23456788899999999988999999999999999999999998654
No 215
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.7e-34 Score=299.09 Aligned_cols=198 Identities=20% Similarity=0.310 Sum_probs=172.6
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC--CeeE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG--PHSF 675 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--~~~~ 675 (848)
.++|++.+.||+|+||.||+|.+. ++.||||+++.... .....+.+.+|++++++++||||+++++++.+. +..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDW--STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTC--CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence 467999999999999999999875 88999999876532 234557789999999999999999999999887 7889
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS--IIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
+||||+++|+|.++++.. ....+++..+..++.||+.||+|||++ + |+||||||+||+++.++.++|+|||++.
T Consensus 86 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKF 161 (271)
T ss_dssp EEEECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred eeecccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEecccee
Confidence 999999999999999765 223589999999999999999999998 8 9999999999999999999999999876
Q ss_pred ccCCCCCCcccccccccccCccccccCCCCc---cchhhhHHHHHHHHHhCCCCCcc
Q 038003 754 FVGPHSSNWTEFAGTFGYAAPEIAYTMRATE---KYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 754 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~~DiwSlG~il~elltg~~P~~~ 807 (848)
.... ....||+.|+|||++.+..++. ++||||||+++|||+||+.||..
T Consensus 162 ~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 213 (271)
T 3kmu_A 162 SFQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD 213 (271)
T ss_dssp TTSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTT
T ss_pred eecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 5332 3356899999999998765544 79999999999999999999864
No 216
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.9e-34 Score=325.83 Aligned_cols=200 Identities=27% Similarity=0.450 Sum_probs=169.7
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
.++|++.+.||+|+||.||+|.+..+..||||+++... ...+++.+|++++++++||||+++++++.+ +..++|
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv 256 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence 46788999999999999999998888889999987642 235678999999999999999999999876 678999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||+++|+|.++++.. ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 257 ~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp ECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred ehhhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 9999999999999643 234588999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-CcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 758 HSS-NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 758 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
... ......+++.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~ 384 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 384 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCC
Confidence 322 1233456789999999998899999999999999999999 9999864
No 217
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=9.3e-34 Score=311.54 Aligned_cols=210 Identities=21% Similarity=0.281 Sum_probs=170.6
Q ss_pred HHHHHHhhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccC-------CchhHHHHHHHHHHHhcCCCCcccc
Q 038003 591 HEEIIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSG-------NMADHDEFLNEVLALKEIRHRNNVK 663 (848)
Q Consensus 591 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~~~~E~~~l~~l~hp~iv~ 663 (848)
..++....++|++.+.||+|+||.||+|...++..||||++....... +....+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 346667789999999999999999999988889999999986653221 1223477899999999999999999
Q ss_pred eEEEeec-----CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeee
Q 038003 664 FHGFCYN-----GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL 738 (848)
Q Consensus 664 l~~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll 738 (848)
+++++.. ....++||||+++ ++.+++... ...+++..+..++.||+.||.|||++ ||+||||||+||++
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILL 167 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEE
T ss_pred eeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEE
Confidence 9999854 3468999999984 787777643 34689999999999999999999999 99999999999999
Q ss_pred CCCCCEEEeeccCccccCCCCCCcccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 739 DSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 739 ~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+.++.+||+|||.+....... ......|++.|+|||++.+ ..++.++||||+||++|+|+||+.||..
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 236 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236 (362)
T ss_dssp CTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cCCCCEEEEecCccccccccc-ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCC
Confidence 999999999999998654332 2345678999999999876 6689999999999999999999999864
No 218
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=4.9e-33 Score=301.73 Aligned_cols=176 Identities=24% Similarity=0.317 Sum_probs=78.7
Q ss_pred CCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEe
Q 038003 103 SKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYL 182 (848)
Q Consensus 103 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l 182 (848)
++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 34444555544444444444444445555555554444444444444444444444444444 3443333 44555555
Q ss_pred ecccccCCCccccccccccccccccccccc--ccCcccccCCcccceeeccccCCCCCCCCcccCccccccccccccccc
Q 038003 183 YKNSLSGSIPSIIGKLKSLLQLDLSENQFS--GSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLN 260 (848)
Q Consensus 183 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~ 260 (848)
++|++++..+..|+.+++|++|++++|.++ +..|..+..+ +|+.|++++|++++ +|..+. ++|++|++++|+++
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~ 206 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQ 206 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCC
Confidence 555554333334444555555555555443 2333334433 44444444444442 332222 33444444444444
Q ss_pred CcCCCcccCCCCCceEEccCccccc
Q 038003 261 GFIPPSIGNLSSLRVLYLYNNGLYG 285 (848)
Q Consensus 261 ~~~p~~l~~l~~L~~L~Ls~N~l~~ 285 (848)
+..+..+..+++|++|++++|.+++
T Consensus 207 ~~~~~~l~~l~~L~~L~L~~N~l~~ 231 (332)
T 2ft3_A 207 AIELEDLLRYSKLYRLGLGHNQIRM 231 (332)
T ss_dssp CCCTTSSTTCTTCSCCBCCSSCCCC
T ss_pred ccCHHHhcCCCCCCEEECCCCcCCc
Confidence 4333344444444444444444433
No 219
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=7.4e-34 Score=310.56 Aligned_cols=204 Identities=23% Similarity=0.413 Sum_probs=177.6
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCc-------------hhHHHHHHHHHHHhcCCCCcccce
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNM-------------ADHDEFLNEVLALKEIRHRNNVKF 664 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~-------------~~~~~~~~E~~~l~~l~hp~iv~l 664 (848)
.++|++.+.||+|+||.||+|.. +++.||+|++......... ...+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999999999988 8999999999766433211 112778999999999999999999
Q ss_pred EEEeecCCeeEEEEeccCCCCHHhH------hcCCCCcccCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEEcCCCCCCee
Q 038003 665 HGFCYNGPHSFLVCEYLDRGSLARI------LGDDVTAKELGWNRRINVIKGVANALSYLHH-DCLPSIIHRDISSKNVL 737 (848)
Q Consensus 665 ~~~~~~~~~~~lV~e~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~ivH~Dlk~~NIl 737 (848)
++++.+.+..++||||+++++|.++ +... ....+++..+..++.||+.||.|||+ . ||+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 9999999999999999999999998 5432 24678999999999999999999999 8 9999999999999
Q ss_pred eCCCCCEEEeeccCccccCCCCCCcccccccccccCccccccC-CCCc-cchhhhHHHHHHHHHhCCCCCccc
Q 038003 738 LDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTM-RATE-KYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 738 l~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~~DiwSlG~il~elltg~~P~~~~ 808 (848)
++.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||||+++|||+||+.||...
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 255 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999876443 33456789999999999877 5665 999999999999999999998643
No 220
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6.7e-34 Score=307.95 Aligned_cols=203 Identities=26% Similarity=0.383 Sum_probs=176.3
Q ss_pred hcCCcccceeccCCceeEEEEEc-----CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEee--c
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-----PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCY--N 670 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--~ 670 (848)
.++|++.+.||+|+||.||+|.+ .+++.||||++... .....+.+.+|++++++++||||+++++++. +
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 97 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPG 97 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC----CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC
Confidence 46799999999999999999973 46889999998764 3445677899999999999999999999886 4
Q ss_pred CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 671 GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 671 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
....++||||+++++|.++++.. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 172 (327)
T 3lxl_A 98 RQSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFG 172 (327)
T ss_dssp SCEEEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGG
T ss_pred CceEEEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccc
Confidence 56789999999999999998653 24589999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCC---cccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcccc
Q 038003 751 IAKFVGPHSSN---WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFS 809 (848)
Q Consensus 751 ~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~ 809 (848)
.+......... .....|++.|+|||++.+..+++++||||||+++|+|+||+.||....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~ 234 (327)
T 3lxl_A 173 LAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 234 (327)
T ss_dssp GCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH
T ss_pred cceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcccc
Confidence 99877543321 233457888999999999889999999999999999999999985443
No 221
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.6e-34 Score=307.96 Aligned_cols=203 Identities=27% Similarity=0.424 Sum_probs=168.1
Q ss_pred HhhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeec---
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYN--- 670 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~--- 670 (848)
...++|++.+.||+|+||.||+|.+ .+++.||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-----ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 3567899999999999999999976 478999999986542 2346788999999998 89999999999976
Q ss_pred ---CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEe
Q 038003 671 ---GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVS 747 (848)
Q Consensus 671 ---~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~ 747 (848)
.+..++||||+++++|.+++... ....+++..+..++.||+.||.|||+. ||+||||||+||+++.++.+||+
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEe
Confidence 46889999999999999998754 235688999999999999999999999 99999999999999999999999
Q ss_pred eccCccccCCCCCCcccccccccccCccccc-----cCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 748 DFGIAKFVGPHSSNWTEFAGTFGYAAPEIAY-----TMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 748 DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
|||++..............|++.|+|||++. +..+++++|||||||++|+|+||+.||..
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 236 (326)
T 2x7f_A 172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236 (326)
T ss_dssp CCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 9999987754433345567899999999987 55688999999999999999999999854
No 222
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=7.9e-34 Score=301.65 Aligned_cols=201 Identities=29% Similarity=0.489 Sum_probs=162.3
Q ss_pred hhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
..++|++.+.||+|+||+||+|.+. ..+|+|+++.... .....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l 96 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI 96 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCC--CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence 3567999999999999999999865 3599999876532 344567789999999999999999999965 4557899
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 97 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp EEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred EEEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccc
Confidence 99999999999998654 35689999999999999999999999 99999999999999999999999999998664
Q ss_pred CCC--CCcccccccccccCccccc---cCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 757 PHS--SNWTEFAGTFGYAAPEIAY---TMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 757 ~~~--~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
... .......|++.|+|||++. +..++.++||||||+++|||+||+.||..
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 227 (289)
T 3og7_A 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccc
Confidence 322 2224467899999999986 56678899999999999999999999864
No 223
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=5.1e-34 Score=316.50 Aligned_cols=198 Identities=25% Similarity=0.301 Sum_probs=164.6
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC-----
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP----- 672 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----- 672 (848)
..+|++.+.||+|+||+||+|....+..+|+|++..... ...+|+++++.++||||+++++++....
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~--------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~ 110 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR--------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDE 110 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT--------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSC
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc--------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCc
Confidence 357999999999999999999887777799998755321 1236999999999999999999986543
Q ss_pred -eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeC-CCCCEEEeecc
Q 038003 673 -HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD-SNFEAHVSDFG 750 (848)
Q Consensus 673 -~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~kl~DfG 750 (848)
..++||||++++.+............+++..+..++.||++||+|||++ ||+||||||+||+++ .++.+||+|||
T Consensus 111 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 111 VFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 3789999998854443332221235688999999999999999999999 999999999999999 79999999999
Q ss_pred CccccCCCCCCcccccccccccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSSNWTEFAGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+++...... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 188 ~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 244 (394)
T 4e7w_A 188 SAKILIAGE-PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPG 244 (394)
T ss_dssp TCEECCTTC-CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CcccccCCC-CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 998775433 23456789999999998765 589999999999999999999999864
No 224
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-33 Score=299.54 Aligned_cols=202 Identities=26% Similarity=0.408 Sum_probs=173.5
Q ss_pred hcCCcccc-eeccCCceeEEEEEcC---CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCe
Q 038003 598 TDDFDEKF-CIGKGGQGSVYKAELP---SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPH 673 (848)
Q Consensus 598 ~~~~~~~~-~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 673 (848)
.++|.+.. .||+|+||.||+|.+. ++..||||+++... .....+.+.+|++++++++||||+++++++ ..+.
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~ 83 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 83 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSS
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc---chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCC
Confidence 35566666 8999999999999653 57789999987652 345567789999999999999999999999 4567
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
.++||||+++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 158 (287)
T 1u59_A 84 LMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSK 158 (287)
T ss_dssp EEEEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred cEEEEEeCCCCCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECccccee
Confidence 89999999999999998644 35689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 754 FVGPHSSN---WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 754 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
........ .....+++.|+|||++.+..+++++||||||+++|||+| |+.||...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 217 (287)
T 1u59_A 159 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217 (287)
T ss_dssp ECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred eeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 77543321 123456889999999998889999999999999999999 99998643
No 225
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.4e-33 Score=299.41 Aligned_cols=205 Identities=23% Similarity=0.374 Sum_probs=176.2
Q ss_pred HhhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccC-----CchhHHHHHHHHHHHhcCC-CCcccceEEEe
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSG-----NMADHDEFLNEVLALKEIR-HRNNVKFHGFC 668 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~ 668 (848)
...++|++.+.||+|+||.||+|... +++.||||+++...... .....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34578999999999999999999765 78999999987643111 0123456789999999995 99999999999
Q ss_pred ecCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEee
Q 038003 669 YNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSD 748 (848)
Q Consensus 669 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~D 748 (848)
.+.+..++||||+++++|.++++.. ..+++..+..++.||+.||.|||++ ||+||||||+||+++.++.+||+|
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred ccCCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEec
Confidence 9999999999999999999998654 5688999999999999999999999 999999999999999999999999
Q ss_pred ccCccccCCCCCCcccccccccccCccccc------cCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 749 FGIAKFVGPHSSNWTEFAGTFGYAAPEIAY------TMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 749 fG~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
||.+....... ......|++.|+|||++. ...++.++||||||+++|||++|+.||..
T Consensus 168 fg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 231 (298)
T 1phk_A 168 FGFSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231 (298)
T ss_dssp CTTCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccchhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcC
Confidence 99998775433 334567899999999985 34578899999999999999999999854
No 226
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=6.8e-33 Score=300.58 Aligned_cols=267 Identities=25% Similarity=0.282 Sum_probs=140.8
Q ss_pred ccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCCCCCcccCcccccccccc
Q 038003 176 NLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLH 255 (848)
Q Consensus 176 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~ 255 (848)
+|++|++++|.+++..|..|+++++|++|+|++|++++..|..++.+++|++|++++|+++ .+|..+. ++|++|+++
T Consensus 55 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~ 131 (332)
T 2ft3_A 55 DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIH 131 (332)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECC
T ss_pred CCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECC
Confidence 4444444444444333344444444444444444444444444444445555555555444 3333333 455555555
Q ss_pred cccccCcCCCcccCCCCCceEEccCcccc--ccCcccccCCCCCccccccccccccccCCccceeeccccCCCCcccccc
Q 038003 256 INQLNGFIPPSIGNLSSLRVLYLYNNGLY--GFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAF 333 (848)
Q Consensus 256 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~ 333 (848)
+|++++..+..+.++++|++|++++|.++ +..+..+..+ +|+.|++++|.+++. |..+
T Consensus 132 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l-~~~~------------------ 191 (332)
T 2ft3_A 132 DNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGI-PKDL------------------ 191 (332)
T ss_dssp SSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSC-CSSS------------------
T ss_pred CCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCcc-Cccc------------------
Confidence 55555544445566666666666666664 2445555555 555566655555432 2110
Q ss_pred CCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCcccccccccccE
Q 038003 334 GDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNK 413 (848)
Q Consensus 334 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 413 (848)
.++|++|++++|.+++ ..+..+..+++|++|+|++|++++..+..+..+++|++
T Consensus 192 --~~~L~~L~l~~n~i~~------------------------~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 245 (332)
T 2ft3_A 192 --PETLNELHLDHNKIQA------------------------IELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRE 245 (332)
T ss_dssp --CSSCSCCBCCSSCCCC------------------------CCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCE
T ss_pred --cCCCCEEECCCCcCCc------------------------cCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCE
Confidence 1344555555555443 33444555555555555555555555555555555666
Q ss_pred EEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccC------ccccceeccccCcCC--CCChhHHhhhcccce
Q 038003 414 LILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGN------LLKLHYLNLSNNQLS--HKIPTEFEKLIHLSE 485 (848)
Q Consensus 414 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~ 485 (848)
|++++|+++ .+|..+..+++|++|++++|++++..+..|.. ...|+.|++++|.+. +..|..|..+++|+.
T Consensus 246 L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~ 324 (332)
T 2ft3_A 246 LHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLA 324 (332)
T ss_dssp EECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTT
T ss_pred EECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhh
Confidence 666666555 44555556666666666666666555555443 245667777777766 556666777777777
Q ss_pred ecccCcc
Q 038003 486 LDLSHNI 492 (848)
Q Consensus 486 L~Ls~N~ 492 (848)
|++++|+
T Consensus 325 l~l~~n~ 331 (332)
T 2ft3_A 325 IQFGNYK 331 (332)
T ss_dssp EEC----
T ss_pred hhccccc
Confidence 7777663
No 227
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=7.9e-33 Score=299.91 Aligned_cols=178 Identities=21% Similarity=0.327 Sum_probs=100.9
Q ss_pred CCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEe
Q 038003 103 SKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYL 182 (848)
Q Consensus 103 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l 182 (848)
+.|++|+|++|++++..+..|+++++|++|+|++|++++..|..|+.+++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 45666666666666555555666666666666666666555666666666666666666665 4555443 56666666
Q ss_pred ecccccCCCcccccccccccccccccccccc--cCcccccCCcccceeeccccCCCCCCCCcccCccccccccccccccc
Q 038003 183 YKNSLSGSIPSIIGKLKSLLQLDLSENQFSG--SIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLN 260 (848)
Q Consensus 183 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~ 260 (848)
++|++++..+..|+++++|++|++++|+++. ..+..+..+++|++|++++|.++ .+|..+. ++|++|++++|+++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKIT 205 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCC
Confidence 6666665555556666666666666666642 44555566666666666666655 2333322 34444444444444
Q ss_pred CcCCCcccCCCCCceEEccCcccccc
Q 038003 261 GFIPPSIGNLSSLRVLYLYNNGLYGF 286 (848)
Q Consensus 261 ~~~p~~l~~l~~L~~L~Ls~N~l~~~ 286 (848)
+..|..+..+++|++|++++|.+++.
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~ 231 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAV 231 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEE
T ss_pred ccCHHHhcCCCCCCEEECCCCcCcee
Confidence 44444444444444444444444433
No 228
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.3e-34 Score=310.92 Aligned_cols=207 Identities=24% Similarity=0.384 Sum_probs=177.0
Q ss_pred HHhhcCCcccceeccCCceeEEEEEcC------CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEe
Q 038003 595 IKATDDFDEKFCIGKGGQGSVYKAELP------SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFC 668 (848)
Q Consensus 595 ~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~ 668 (848)
....++|++.+.||+|+||.||+|.+. ++..||+|++.... .......+.+|++++++++||||+++++++
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---CHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 345678999999999999999999654 46789999987542 334556788999999999999999999999
Q ss_pred ecCCeeEEEEeccCCCCHHhHhcCCC-------CcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCC
Q 038003 669 YNGPHSFLVCEYLDRGSLARILGDDV-------TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSN 741 (848)
Q Consensus 669 ~~~~~~~lV~e~~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~ 741 (848)
.+.+..++||||+++|+|.++++... ....+++..+..++.||+.||.|||++ ||+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCC
Confidence 99999999999999999999986421 124568899999999999999999999 99999999999999999
Q ss_pred CCEEEeeccCccccCCCCCC--cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 742 FEAHVSDFGIAKFVGPHSSN--WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 742 ~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
+.+||+|||+++........ .....+++.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 243 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 243 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc
Confidence 99999999999866432221 123456889999999998889999999999999999999 8999864
No 229
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.2e-33 Score=316.72 Aligned_cols=198 Identities=22% Similarity=0.255 Sum_probs=171.4
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC------CCCcccceEEEeec
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI------RHRNNVKFHGFCYN 670 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l------~hp~iv~l~~~~~~ 670 (848)
..+|++.+.||+|+||+||+|.. .+++.||||++... ....+.+.+|+++++.+ +|+||+++++++..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~ 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF 170 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc
Confidence 45799999999999999999955 46899999998653 23455677788877766 67899999999999
Q ss_pred CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCC--EEEee
Q 038003 671 GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE--AHVSD 748 (848)
Q Consensus 671 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~--~kl~D 748 (848)
....++||||+. ++|.+++... ....+++..+..++.||+.||+|||++ +||||||||+|||++.++. +||+|
T Consensus 171 ~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~D 245 (429)
T 3kvw_A 171 RNHICMTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245 (429)
T ss_dssp TTEEEEEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECC
T ss_pred CCeEEEEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEee
Confidence 999999999996 5898888654 234589999999999999999999999 9999999999999999887 99999
Q ss_pred ccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 749 FGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 749 fG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
||+++..... ....+||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 246 FG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 246 FGSSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CTTCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 9999875432 24467899999999999999999999999999999999999998543
No 230
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.7e-33 Score=309.44 Aligned_cols=200 Identities=24% Similarity=0.373 Sum_probs=171.5
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC----
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG---- 671 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~---- 671 (848)
...+|++.+.||+|+||.||+|... ++..||||++.... .....+.+.+|++++++++||||+++++++...
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 101 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE---HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT---CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTT
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc---CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccc
Confidence 3468999999999999999999654 78899999987532 334457788999999999999999999998754
Q ss_pred -CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 672 -PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 672 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
...++||||+++ +|.++++. ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~iv~e~~~~-~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 173 (364)
T 3qyz_A 102 MKDVYIVQDLMET-DLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFG 173 (364)
T ss_dssp CCCEEEEEECCSE-EHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred cceEEEEEcccCc-CHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCc
Confidence 368999999985 89888854 3588999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCC---CcccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSS---NWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.++....... .....+||+.|+|||++.+ ..+++++||||+||++|||+||+.||..
T Consensus 174 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 234 (364)
T 3qyz_A 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234 (364)
T ss_dssp TCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCC
Confidence 9987654322 1244689999999998764 4589999999999999999999999854
No 231
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-33 Score=305.92 Aligned_cols=202 Identities=26% Similarity=0.463 Sum_probs=167.9
Q ss_pred hcCCcccceeccCCceeEEEEEcCC-----CCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPS-----GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 672 (848)
..+|+..+.||+|+||.||+|.+.. +..||||+++... .......+.+|++++++++||||+++++++.+.+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 119 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC
Confidence 3568888999999999999996542 2359999987543 3345567899999999999999999999999999
Q ss_pred eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCc
Q 038003 673 HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIA 752 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~ 752 (848)
..++||||+++++|.++++.. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||.+
T Consensus 120 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 194 (333)
T 1mqb_A 120 PMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLS 194 (333)
T ss_dssp SEEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred CcEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcc
Confidence 999999999999999998653 35689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC---cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 753 KFVGPHSSN---WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 753 ~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
+........ .....+++.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~ 253 (333)
T 1mqb_A 195 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE 253 (333)
T ss_dssp ----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred hhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCccc
Confidence 876543221 122345788999999998899999999999999999999 9999854
No 232
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.9e-33 Score=311.28 Aligned_cols=199 Identities=24% Similarity=0.290 Sum_probs=165.4
Q ss_pred HhhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC---
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG--- 671 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--- 671 (848)
...++|++.+.||+|+||+||+|.. .+++.||||++..... ...+|+++++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 75 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--------YKNRELDIMKVLDHVNIIKLVDYFYTTGDE 75 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHTTCCCTTBCCEEEEEEEC---
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--------hHHHHHHHHHHcCCCCccchhheeeecCcc
Confidence 3467899999999999999999965 5899999999865421 123699999999999999999998443
Q ss_pred -----------------------------------CeeEEEEeccCCCCHHhHhcCC-CCcccCCHHHHHHHHHHHHHHH
Q 038003 672 -----------------------------------PHSFLVCEYLDRGSLARILGDD-VTAKELGWNRRINVIKGVANAL 715 (848)
Q Consensus 672 -----------------------------------~~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~~L 715 (848)
...++||||+++ +|.+.+... .....+++..+..++.||++||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL 154 (383)
T 3eb0_A 76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV 154 (383)
T ss_dssp ----------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 347899999985 777666431 1235689999999999999999
Q ss_pred HHHhhCCCCCeEEcCCCCCCeeeC-CCCCEEEeeccCccccCCCCCCcccccccccccCccccccCC-CCccchhhhHHH
Q 038003 716 SYLHHDCLPSIIHRDISSKNVLLD-SNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMR-ATEKYDVYSFGV 793 (848)
Q Consensus 716 ~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwSlG~ 793 (848)
+|||++ ||+||||||+||+++ .++.+||+|||.++...... ......||+.|+|||++.+.. ++.++||||+||
T Consensus 155 ~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 155 GFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp HHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred HHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 999999 999999999999997 68899999999998775433 334567899999999988754 899999999999
Q ss_pred HHHHHHhCCCCCcc
Q 038003 794 LVFEVIKGNHPRDF 807 (848)
Q Consensus 794 il~elltg~~P~~~ 807 (848)
++|||++|+.||..
T Consensus 231 il~ell~g~~pf~~ 244 (383)
T 3eb0_A 231 VFGELILGKPLFSG 244 (383)
T ss_dssp HHHHHHHSSCSSCC
T ss_pred HHHHHHhCCCCCCC
Confidence 99999999999864
No 233
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-34 Score=314.20 Aligned_cols=201 Identities=28% Similarity=0.443 Sum_probs=160.9
Q ss_pred cCCcccceeccCCceeEEEEEcC--CC--CEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeec-CCe
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELP--SG--DIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYN-GPH 673 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~ 673 (848)
..|++.+.||+|+||.||+|.+. ++ ..||+|+++... .....+++.+|+.++++++||||+++++++.+ .+.
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~ 165 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 165 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS---CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCC
Confidence 35777889999999999999653 22 358999986532 34566789999999999999999999998754 457
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
.++||||+++|+|.++++.. ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 240 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 240 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eEEEEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccc
Confidence 89999999999999999754 34578899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC----CcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 754 FVGPHSS----NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 754 ~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
....... ......+++.|+|||++.+..+++++|||||||++|||+| |..||..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~ 299 (373)
T 3c1x_A 241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 299 (373)
T ss_dssp -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT
T ss_pred cccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCC
Confidence 6643221 1133457789999999999999999999999999999999 6677653
No 234
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=5.8e-34 Score=307.06 Aligned_cols=204 Identities=22% Similarity=0.369 Sum_probs=171.3
Q ss_pred hhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeec----C
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYN----G 671 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~----~ 671 (848)
..++|++.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+++++.++||||+++++++.. .
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH----EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAK 102 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC----CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCC
Confidence 346799999999999999999976 57999999998653 34556778999999999999999999999872 3
Q ss_pred CeeEEEEeccCCCCHHhHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 672 PHSFLVCEYLDRGSLARILGDDV-TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 672 ~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
...++||||+++|+|.+++.... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg 179 (317)
T 2buj_A 103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLG 179 (317)
T ss_dssp EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCS
T ss_pred ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecC
Confidence 47899999999999999886421 235689999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCC---------cccccccccccCccccccCC---CCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSSN---------WTEFAGTFGYAAPEIAYTMR---ATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~~---------~~~~~g~~~y~aPE~~~~~~---~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.+......... .....|++.|+|||++.+.. +++++||||||+++|||+||+.||+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 248 (317)
T 2buj_A 180 SMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248 (317)
T ss_dssp SCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHH
T ss_pred cchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhh
Confidence 98765421111 12345799999999987554 68899999999999999999999864
No 235
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=7.4e-34 Score=311.66 Aligned_cols=197 Identities=25% Similarity=0.392 Sum_probs=154.8
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC-----
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG----- 671 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~----- 671 (848)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+++++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 47899999999999999999964 578999999987642 1334567788999999999999999999998654
Q ss_pred -CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 672 -PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 672 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
...++|||++ +++|.++++. ..+++..+..++.||++||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecc
Confidence 5679999999 6788888754 4689999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCCcccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSSNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+++..... .....||+.|+|||++.+ ..++.++||||+||++|||+||+.||..
T Consensus 178 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 232 (367)
T 2fst_X 178 LARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99876432 345678999999999887 6789999999999999999999999854
No 236
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.9e-34 Score=315.39 Aligned_cols=200 Identities=11% Similarity=0.080 Sum_probs=153.7
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHH---HHhcCCCCcccceE-------E
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVL---ALKEIRHRNNVKFH-------G 666 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~---~l~~l~hp~iv~l~-------~ 666 (848)
..+|+..+.||+|+||+||+|.+. +++.||||++...... .....+.+.+|++ .++. +||||++++ +
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d 138 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-SRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSD 138 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-HHHHHHHHHHHHHHHHHHHC-----------CBCCCCE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc-cccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeeh
Confidence 456999999999999999999754 7899999999875321 2344566777854 5555 799988755 4
Q ss_pred EeecC-----------------CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHH------HHHHHHHHHHHHHHhhCCC
Q 038003 667 FCYNG-----------------PHSFLVCEYLDRGSLARILGDDVTAKELGWNRR------INVIKGVANALSYLHHDCL 723 (848)
Q Consensus 667 ~~~~~-----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~qia~~L~~LH~~~~ 723 (848)
++... ...++||||++ |+|.++++.. ...+++..+ ..++.||+.||+|||++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~-- 213 (371)
T 3q60_A 139 AVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQSK-- 213 (371)
T ss_dssp EEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred heecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC--
Confidence 44332 33799999999 7999998753 123344445 67789999999999999
Q ss_pred CCeEEcCCCCCCeeeCCCCCEEEeeccCccccCCCCCCcccccccccccCcccccc--CCCCccchhhhHHHHHHHHHhC
Q 038003 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT--MRATEKYDVYSFGVLVFEVIKG 801 (848)
Q Consensus 724 ~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg 801 (848)
||+||||||+|||++.++.+||+|||+++..... .....+++.|+|||++.+ ..++.++|||||||++|||+||
T Consensus 214 -~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 214 -GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp -TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred -CCccCcCCHHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999876432 224567799999999987 6789999999999999999999
Q ss_pred CCCCccc
Q 038003 802 NHPRDFF 808 (848)
Q Consensus 802 ~~P~~~~ 808 (848)
+.||...
T Consensus 290 ~~Pf~~~ 296 (371)
T 3q60_A 290 FLPFGLV 296 (371)
T ss_dssp SCSTTBC
T ss_pred CCCCCCc
Confidence 9998765
No 237
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.6e-33 Score=310.22 Aligned_cols=198 Identities=26% Similarity=0.369 Sum_probs=163.3
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC----
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP---- 672 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~---- 672 (848)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc--CChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 46799999999999999999965 478999999987642 13345677889999999999999999999997654
Q ss_pred --eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 673 --HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 673 --~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
..++||||+++ ++.+.++. .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 102 FQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp CCEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEee
Confidence 78999999986 78877753 478899999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+++..... .......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 173 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 228 (371)
T 2xrw_A 173 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 228 (371)
T ss_dssp C-----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 99876542 223456799999999999998999999999999999999999999864
No 238
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-34 Score=315.97 Aligned_cols=198 Identities=19% Similarity=0.268 Sum_probs=170.1
Q ss_pred hcCCcccceeccCCceeEEEEEcCC---------CCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccc-----
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPS---------GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVK----- 663 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~----- 663 (848)
.++|++.+.||+|+||.||+|.... ++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~ 111 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQNFFQRAAKPLQVNKWKKL 111 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHHHHHHHhcccchhhhhhhh
Confidence 3679999999999999999997653 788999998643 34778999999999999987
Q ss_pred ----------eEEEeec-CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCC
Q 038003 664 ----------FHGFCYN-GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDIS 732 (848)
Q Consensus 664 ----------l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk 732 (848)
+++++.. ....++||||+ +++|.+++... ....+++..+..++.||+.||+|||++ +|+|||||
T Consensus 112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dik 186 (352)
T 2jii_A 112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVT 186 (352)
T ss_dssp TTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCC
T ss_pred ccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCC
Confidence 6677765 67889999999 99999999754 235789999999999999999999999 99999999
Q ss_pred CCCeeeCCCC--CEEEeeccCccccCCCCC-------CcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCC
Q 038003 733 SKNVLLDSNF--EAHVSDFGIAKFVGPHSS-------NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNH 803 (848)
Q Consensus 733 ~~NIll~~~~--~~kl~DfG~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~ 803 (848)
|+||+++.++ .+||+|||+++.+..... ......||+.|+|||++.+..+++++|||||||++|||+||+.
T Consensus 187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 266 (352)
T 2jii_A 187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL 266 (352)
T ss_dssp GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999998 999999999987643221 1234578999999999999899999999999999999999999
Q ss_pred CCcccc
Q 038003 804 PRDFFS 809 (848)
Q Consensus 804 P~~~~~ 809 (848)
||....
T Consensus 267 pf~~~~ 272 (352)
T 2jii_A 267 PWTNCL 272 (352)
T ss_dssp TTGGGT
T ss_pred CcccCC
Confidence 997654
No 239
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=305.96 Aligned_cols=202 Identities=24% Similarity=0.451 Sum_probs=165.4
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCE----EEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDI----VAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 672 (848)
.++|++.+.||+|+||.||+|.+. +++. ||+|.+.... .....+.+.+|+.++++++||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS---SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC
Confidence 467999999999999999999754 5554 4666654432 3345678899999999999999999999998765
Q ss_pred eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCc
Q 038003 673 HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIA 752 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~ 752 (848)
.++|+||+++|+|.+++... ...+++..+..++.||+.||.|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a 164 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-
T ss_pred -ceEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcce
Confidence 78999999999999998654 24688999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC--cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 753 KFVGPHSSN--WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 753 ~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
+........ .....+++.|+|||++.+..+++++|||||||++|||+| |+.||...
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 223 (327)
T 3lzb_A 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223 (327)
T ss_dssp ---------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred eEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 877543322 233456789999999999999999999999999999999 99998643
No 240
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.9e-33 Score=300.16 Aligned_cols=201 Identities=28% Similarity=0.437 Sum_probs=168.3
Q ss_pred hcCCcccceeccCCceeEEEEEcCC----CCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEee-cCC
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPS----GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCY-NGP 672 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~-~~~ 672 (848)
..+|++.+.||+|+||.||+|.+.+ ...+|+|++.... .....+.+.+|++++++++||||+++++++. ..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 100 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC---CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC
Confidence 4568889999999999999997542 2358999886532 3455677899999999999999999999864 456
Q ss_pred eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCc
Q 038003 673 HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIA 752 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~ 752 (848)
..++||||+++|+|.++++.. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a 175 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLA 175 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred ceEEEEeCCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccc
Confidence 789999999999999999754 35678999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC----CCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhC-CCCCc
Q 038003 753 KFVGPHS----SNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKG-NHPRD 806 (848)
Q Consensus 753 ~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg-~~P~~ 806 (848)
+...... .......+++.|+|||.+.+..+++++||||+|+++|||+|| ..||.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~ 234 (298)
T 3f66_A 176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 234 (298)
T ss_dssp CCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCc
Confidence 8764322 112345678899999999998999999999999999999995 55543
No 241
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.2e-33 Score=300.63 Aligned_cols=203 Identities=27% Similarity=0.416 Sum_probs=171.5
Q ss_pred hhcCCcccc-eeccCCceeEEEEEc---CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC
Q 038003 597 ATDDFDEKF-CIGKGGQGSVYKAEL---PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 597 ~~~~~~~~~-~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 672 (848)
..++|.+.+ .||+|+||.||+|.+ .+++.||||+++.... .....+.+.+|++++++++||||+++++++ ..+
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~ 90 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 90 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESS
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCC
Confidence 346788887 999999999999944 2468899999876531 234467889999999999999999999999 566
Q ss_pred eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCc
Q 038003 673 HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIA 752 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~ 752 (848)
..++||||+++++|.++++.. ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 164 (291)
T 1xbb_A 91 SWMLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS 164 (291)
T ss_dssp SEEEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred CcEEEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcc
Confidence 789999999999999999754 4588999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCc---ccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 753 KFVGPHSSNW---TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 753 ~~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
.......... ....+++.|+|||++.+..+++++||||||+++|||+| |+.||...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 224 (291)
T 1xbb_A 165 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 224 (291)
T ss_dssp EECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred eeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 8775433221 22345788999999998889999999999999999999 99998653
No 242
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.7e-33 Score=304.80 Aligned_cols=204 Identities=24% Similarity=0.355 Sum_probs=171.6
Q ss_pred HhhcCCcccceeccCCceeEEEEEc--CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC---CCCcccceEEEee-
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAEL--PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI---RHRNNVKFHGFCY- 669 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l---~hp~iv~l~~~~~- 669 (848)
...++|++.+.||+|+||.||+|.. .+++.||+|+++...... .....+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~ 85 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV 85 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT--SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc--cCCchhhHHHHHHHhhhccCCCCeEeeeeeeee
Confidence 4567899999999999999999976 467899999987654221 1223455677776655 8999999999987
Q ss_pred ----cCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEE
Q 038003 670 ----NGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAH 745 (848)
Q Consensus 670 ----~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 745 (848)
.....++||||++ |+|.+++... ....+++..+..++.||+.||.|||++ ||+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 86 SRTDRETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp EECSSEEEEEEEEECCS-CBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCceEEEEEecCC-CCHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEE
Confidence 4567899999998 5999988654 224588999999999999999999999 999999999999999999999
Q ss_pred EeeccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 746 VSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 746 l~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
|+|||.++..... .......|++.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 161 l~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 221 (326)
T 1blx_A 161 LADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 221 (326)
T ss_dssp ECSCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred EecCcccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence 9999999876432 223456789999999999998999999999999999999999999864
No 243
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.6e-33 Score=297.97 Aligned_cols=202 Identities=23% Similarity=0.378 Sum_probs=170.5
Q ss_pred hhcCCcccceeccCCceeEEEEEcCC----CCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELPS----GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 672 (848)
..++|.+.+.||+|+||.||+|.+.. +..||+|++.... .....+.+.+|++++++++||||+++++++.++
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 85 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC---TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE- 85 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS---CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc---CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-
Confidence 35679999999999999999996542 3469999987653 334567789999999999999999999998754
Q ss_pred eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCc
Q 038003 673 HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIA 752 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~ 752 (848)
..++||||+++++|.++++.. ...+++..+..++.|++.||.|||++ ||+||||||+||+++.++.+||+|||.+
T Consensus 86 ~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 160 (281)
T 3cc6_A 86 PTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLS 160 (281)
T ss_dssp SCEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGG
T ss_pred CCEEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCC
Confidence 568999999999999998653 24588999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC-CcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 753 KFVGPHSS-NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 753 ~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
........ ......+++.|+|||++.+..+++++||||||+++|||+| |+.||..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~ 217 (281)
T 3cc6_A 161 RYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 217 (281)
T ss_dssp GCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred cccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCccc
Confidence 87654322 1233456889999999998889999999999999999998 9999854
No 244
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.7e-33 Score=302.76 Aligned_cols=208 Identities=23% Similarity=0.356 Sum_probs=165.5
Q ss_pred HHhhcCCcccceeccCCceeEEEEEcC----CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeec
Q 038003 595 IKATDDFDEKFCIGKGGQGSVYKAELP----SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYN 670 (848)
Q Consensus 595 ~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~ 670 (848)
....++|.+.+.||+|+||.||+|... ++..||+|+++.... .....+.+.+|++++++++||||+++++++.+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 107 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS--SQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc--chhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence 345678999999999999999999653 345899999876532 23455778999999999999999999999987
Q ss_pred CC-----eeEEEEeccCCCCHHhHhcCC---CCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC
Q 038003 671 GP-----HSFLVCEYLDRGSLARILGDD---VTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF 742 (848)
Q Consensus 671 ~~-----~~~lV~e~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 742 (848)
.+ ..++||||+++++|.+++... .....+++..+..++.||+.||.|||++ +|+||||||+||+++.++
T Consensus 108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTS
T ss_pred ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCC
Confidence 55 359999999999999988432 1235689999999999999999999999 999999999999999999
Q ss_pred CEEEeeccCccccCCCCC--CcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 743 EAHVSDFGIAKFVGPHSS--NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 743 ~~kl~DfG~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
.+||+|||+++....... ......+++.|+|||++.+..+++++||||||+++|||+| |..||..
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 252 (313)
T 3brb_A 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252 (313)
T ss_dssp CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCcc
Confidence 999999999987644321 1233456889999999999899999999999999999999 8899864
No 245
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.8e-33 Score=307.27 Aligned_cols=196 Identities=24% Similarity=0.419 Sum_probs=167.4
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCee--
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHS-- 674 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~-- 674 (848)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 118 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ--SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 118 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc--chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence 46799999999999999999965 4789999999876431 234467788999999999999999999999877654
Q ss_pred ----EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 675 ----FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 675 ----~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
++||||+. ++|.+++. ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 119 ~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 119 FYDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999998 48888774 3488999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCCcccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSSNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.++..... .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 190 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 244 (371)
T 4exu_A 190 LARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244 (371)
T ss_dssp CC-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 99876432 345678999999999887 6789999999999999999999999864
No 246
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.6e-33 Score=298.81 Aligned_cols=200 Identities=21% Similarity=0.308 Sum_probs=167.5
Q ss_pred hhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEe-ecCCee
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFC-YNGPHS 674 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-~~~~~~ 674 (848)
..++|++.+.||+|+||.||+|.. .+++.||||++..... .+.+.+|+++++.++|++++..+.++ .+.+..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc------chHHHHHHHHHHHhcCCCCCCeeeeecCCCCce
Confidence 457899999999999999999965 5789999998655421 23477899999999988877766665 567788
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeee---CCCCCEEEeeccC
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL---DSNFEAHVSDFGI 751 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfG~ 751 (848)
++||||+ +++|.+++... ...+++..+..++.||+.||.|||++ +|+||||||+||++ +.++.+||+|||+
T Consensus 81 ~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~ 154 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEEEECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEEEcc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcc
Confidence 9999999 88999998643 24689999999999999999999999 99999999999999 7889999999999
Q ss_pred ccccCCCCC-------CcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 752 AKFVGPHSS-------NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 752 ~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
++....... ......||+.|+|||++.+..+++++|||||||++|||+||+.||...
T Consensus 155 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 218 (296)
T 4hgt_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL 218 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred ceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCccc
Confidence 987654322 123467899999999999999999999999999999999999998653
No 247
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=1.7e-37 Score=353.33 Aligned_cols=135 Identities=22% Similarity=0.179 Sum_probs=75.7
Q ss_pred CCCcEEeccCCccccccccc-ccCCCCCcEEEccccCCCC----CCchhhhccccccEEEecccCcCCCCCcccc-CcC-
Q 038003 79 PHLANLNLSFNLFFGNIPLQ-IGNLSKLQYLDLGSNQLSG----LIPPEIGKLNQLRRLYLDMNQLHGTIPPEIG-QLS- 151 (848)
Q Consensus 79 ~~l~~L~l~~n~~~~~~p~~-~~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~- 151 (848)
++|++|||++|.++...... +..+++|++|+|++|++++ .+|..+..+++|++|+|++|++++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 46677777777776443332 6667777777777777764 2455666667777777777776643333332 233
Q ss_pred ---CccEEEcCCCcCCC----CCCCcccCccccceEEeecccccCCCcccccc-----cccccccccccccccc
Q 038003 152 ---LIDKLALCHNNLHG----SIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGK-----LKSLLQLDLSENQFSG 213 (848)
Q Consensus 152 ---~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~ 213 (848)
+|++|+|++|+++. .+|..+..+++|++|++++|.+++..+..+.. .++|++|+|++|++++
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~ 156 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSA 156 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBG
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCH
Confidence 46666666666552 33555555556666666665554332222221 2345555555554443
No 248
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7.1e-34 Score=308.65 Aligned_cols=206 Identities=25% Similarity=0.398 Sum_probs=175.9
Q ss_pred HhhcCCcccceeccCCceeEEEEEcC-CC-----CEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEe
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAELP-SG-----DIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFC 668 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~-----~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~ 668 (848)
...++|++.+.||+|+||.||+|.+. ++ ..||+|++.... .....+.+.+|+++++++ +||||+++++++
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA---HADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc---ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 34578999999999999999999754 22 479999987653 334567789999999999 899999999999
Q ss_pred ecCCeeEEEEeccCCCCHHhHhcCCC-----------CcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCee
Q 038003 669 YNGPHSFLVCEYLDRGSLARILGDDV-----------TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVL 737 (848)
Q Consensus 669 ~~~~~~~lV~e~~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIl 737 (848)
.+.+..++||||+++|+|.+++.... ....+++..+..++.||+.||+|||++ ||+||||||+||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence 99999999999999999999886431 124578999999999999999999999 9999999999999
Q ss_pred eCCCCCEEEeeccCccccCCCCCC--cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 738 LDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 738 l~~~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
++.++.+||+|||+++........ .....+++.|+|||++.+..++.++|||||||++|||+| |..||..
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 269 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcc
Confidence 999999999999999876433221 123456789999999998899999999999999999999 9999864
No 249
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.2e-33 Score=304.35 Aligned_cols=209 Identities=25% Similarity=0.369 Sum_probs=177.4
Q ss_pred HHHhhcCCcccceeccCCceeEEEEEc------CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEE
Q 038003 594 IIKATDDFDEKFCIGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHG 666 (848)
Q Consensus 594 ~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~ 666 (848)
.....++|++.+.||+|+||.||+|.+ .+++.||||+++... .....+.+.+|+++++++ +||||+++++
T Consensus 22 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 22 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred eecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC---CcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 334567899999999999999999963 356889999987653 334556789999999999 7999999999
Q ss_pred EeecCC-eeEEEEeccCCCCHHhHhcCCCC-------------cccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCC
Q 038003 667 FCYNGP-HSFLVCEYLDRGSLARILGDDVT-------------AKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDIS 732 (848)
Q Consensus 667 ~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk 732 (848)
++...+ ..++||||+++++|.+++..... ...+++..+..++.||+.||.|||++ +|+|||||
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dik 175 (316)
T 2xir_A 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLA 175 (316)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCc
Confidence 987754 58999999999999999976522 12278899999999999999999999 99999999
Q ss_pred CCCeeeCCCCCEEEeeccCccccCCCCCC--cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 733 SKNVLLDSNFEAHVSDFGIAKFVGPHSSN--WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 733 ~~NIll~~~~~~kl~DfG~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
|+||+++.++.+||+|||+++........ .....|++.|+|||++.+..++.++||||||+++|||+| |+.||...
T Consensus 176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999999999876543322 233567889999999999899999999999999999998 99998643
No 250
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.4e-33 Score=297.87 Aligned_cols=199 Identities=21% Similarity=0.310 Sum_probs=170.8
Q ss_pred hhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEe-ecCCee
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFC-YNGPHS 674 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-~~~~~~ 674 (848)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++.++|++++..+.++ .+.+..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN 80 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS------SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc------chhHHHHHHHHHHHhhcCCCCCccccccCCCCce
Confidence 356899999999999999999975 589999999986542 123578999999999988877666655 566788
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeee---CCCCCEEEeeccC
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL---DSNFEAHVSDFGI 751 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfG~ 751 (848)
++||||+ +++|.++++.. ...+++..+..++.||+.||+|||++ +|+||||||+||++ +.++.+||+|||.
T Consensus 81 ~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 154 (296)
T 3uzp_A 81 VMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEEEec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCC
Confidence 9999999 88999998643 24689999999999999999999999 99999999999999 4888999999999
Q ss_pred ccccCCCCC-------CcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 752 AKFVGPHSS-------NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 752 ~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
++....... ......|++.|+|||++.+..+++++|||||||++|||+||+.||..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 217 (296)
T 3uzp_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG 217 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred cccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 987754332 12456789999999999999999999999999999999999999875
No 251
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-33 Score=298.56 Aligned_cols=198 Identities=27% Similarity=0.408 Sum_probs=168.9
Q ss_pred CCcccceeccCCceeEEEEEcC-CC---CEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCee-
Q 038003 600 DFDEKFCIGKGGQGSVYKAELP-SG---DIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHS- 674 (848)
Q Consensus 600 ~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~- 674 (848)
.|...+.||+|+||+||+|.+. ++ ..+|+|++.... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT---EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc---cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCc
Confidence 4667789999999999999653 22 379999986532 344567889999999999999999999999876655
Q ss_pred EEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccc
Q 038003 675 FLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~ 754 (848)
++||||+.+++|.++++.. ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.
T Consensus 99 ~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EEEECCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEEEecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 9999999999999999764 35678899999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC----CCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCC
Q 038003 755 VGPHS----SNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPR 805 (848)
Q Consensus 755 ~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~ 805 (848)
..... .......+++.|+|||.+.+..+++++||||||+++|+|+||+.|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~ 228 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCC
Confidence 54321 2223456789999999999999999999999999999999966664
No 252
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-33 Score=326.95 Aligned_cols=200 Identities=25% Similarity=0.405 Sum_probs=167.4
Q ss_pred CCcccc-eeccCCceeEEEEEcC---CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 600 DFDEKF-CIGKGGQGSVYKAELP---SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 600 ~~~~~~-~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
++.+.. .||+|+||.||+|.++ ++..||||+++... .....+++.+|++++++++|||||++++++.. +..+
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~ 411 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALM 411 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC---SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeE
Confidence 344444 7999999999999653 45679999997652 33456789999999999999999999999976 5689
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||||+++|+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 412 lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 412 LVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp EEEECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred EEEEeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 999999999999999654 35689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCc---ccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 756 GPHSSNW---TEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 756 ~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
....... ....+++.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 543 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 5432211 22345689999999998899999999999999999998 99998643
No 253
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.4e-33 Score=313.69 Aligned_cols=197 Identities=27% Similarity=0.354 Sum_probs=163.1
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC----C
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG----P 672 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~----~ 672 (848)
..+|+..+.||+|+||+||+|.+. +++.||||++.... +...+|+++++.++||||++++++|... +
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~--------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~ 124 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD 124 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT--------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTT
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc--------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCc
Confidence 356999999999999999999765 69999999986532 1123699999999999999999998542 2
Q ss_pred --eeEEEEeccCCCCHHhHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCC-CCEEEee
Q 038003 673 --HSFLVCEYLDRGSLARILGDD-VTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSN-FEAHVSD 748 (848)
Q Consensus 673 --~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~kl~D 748 (848)
..++||||+++ ++.+.+... .....+++..+..++.||++||+|||++ ||+||||||+|||++.+ +.+||+|
T Consensus 125 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~D 200 (420)
T 1j1b_A 125 EVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCD 200 (420)
T ss_dssp EEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECC
T ss_pred ceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEecc
Confidence 36799999987 565554321 1235689999999999999999999999 99999999999999965 5789999
Q ss_pred ccCccccCCCCCCcccccccccccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 749 FGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 749 fG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
||+++...... ......||+.|+|||++.+. .++.++|||||||++|||+||+.||..
T Consensus 201 FG~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~ 259 (420)
T 1j1b_A 201 FGSAKQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 259 (420)
T ss_dssp CTTCEECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred chhhhhcccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 99998765433 23456789999999998765 689999999999999999999999864
No 254
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.1e-33 Score=297.56 Aligned_cols=197 Identities=24% Similarity=0.422 Sum_probs=172.7
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeec-----
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYN----- 670 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~----- 670 (848)
...+|++.+.||+|+||.||+|.+. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence 3467999999999999999999765 79999999986542 245689999999999999999998854
Q ss_pred -----------CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeC
Q 038003 671 -----------GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD 739 (848)
Q Consensus 671 -----------~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~ 739 (848)
....++||||+++++|.++++.. ....+++..+..++.||+.||.|||++ +|+||||||+||+++
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLV 156 (284)
T ss_dssp --------CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred ccccccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEc
Confidence 34579999999999999999654 235688999999999999999999999 999999999999999
Q ss_pred CCCCEEEeeccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCc
Q 038003 740 SNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRD 806 (848)
Q Consensus 740 ~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~ 806 (848)
.++.+||+|||.+....... ......|++.|+|||++.+..++.++||||||+++|||+||..|+.
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 222 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF 222 (284)
T ss_dssp ETTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred CCCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence 99999999999998775433 2345678999999999999889999999999999999999999964
No 255
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.6e-33 Score=305.09 Aligned_cols=205 Identities=26% Similarity=0.395 Sum_probs=170.8
Q ss_pred hhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHH-HhcCCCCcccceEEEeecCCee
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLA-LKEIRHRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~-l~~l~hp~iv~l~~~~~~~~~~ 674 (848)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ......++..|+.+ ++.++||||+++++++.+.+..
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 125 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV---NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 125 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCC---CCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEecccc---CcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcE
Confidence 456799999999999999999975 578999999987653 22334555566665 7888999999999999999999
Q ss_pred EEEEeccCCCCHHhHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 675 FLVCEYLDRGSLARILGDD-VTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 675 ~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
++||||+++ +|.+++... .....+++..+..++.||+.||+|||++. ||+||||||+||+++.++.+||+|||+++
T Consensus 126 ~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 126 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp EEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred EEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 999999986 888877531 12357899999999999999999999732 89999999999999999999999999998
Q ss_pred ccCCCCCCcccccccccccCccccc----cCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 754 FVGPHSSNWTEFAGTFGYAAPEIAY----TMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 754 ~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
..... .......||+.|+|||++. +..+++++|||||||++|||+||+.||+..
T Consensus 203 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~ 260 (340)
T 3an0_A 203 YLVDS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 260 (340)
T ss_dssp HHSCH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCC
T ss_pred ecccc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccc
Confidence 76432 1223357999999999964 346889999999999999999999998753
No 256
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=3e-32 Score=295.29 Aligned_cols=289 Identities=23% Similarity=0.248 Sum_probs=146.9
Q ss_pred cccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccc
Q 038003 128 QLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLS 207 (848)
Q Consensus 128 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 207 (848)
+|+.++++++.++ .+|..+. +.|++|+|++|++++..+..|+++++|++|++++|++++..|..|+.+++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 5666666666665 4444432 345555555555554444455555555555555555554445555555555555555
Q ss_pred cccccccCcccccCCcccceeeccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccc--
Q 038003 208 ENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYG-- 285 (848)
Q Consensus 208 ~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-- 285 (848)
+|+++ .+|..+. + +|++|++++|++++..+..+.++++|++|++++|.+..
T Consensus 109 ~n~l~-~l~~~~~--~------------------------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 161 (330)
T 1xku_A 109 KNQLK-ELPEKMP--K------------------------TLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG 161 (330)
T ss_dssp SSCCS-BCCSSCC--T------------------------TCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGG
T ss_pred CCcCC-ccChhhc--c------------------------cccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccC
Confidence 55554 3333322 3 44444444444444434444444455555555554431
Q ss_pred cCcccccCCCCCccccccccccccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccE
Q 038003 286 FVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLST 365 (848)
Q Consensus 286 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 365 (848)
..+..+..+++|+.|++++|.++.. |.. -.++|++|++++|++++.
T Consensus 162 ~~~~~~~~l~~L~~L~l~~n~l~~l-~~~--------------------~~~~L~~L~l~~n~l~~~------------- 207 (330)
T 1xku_A 162 IENGAFQGMKKLSYIRIADTNITTI-PQG--------------------LPPSLTELHLDGNKITKV------------- 207 (330)
T ss_dssp BCTTGGGGCTTCCEEECCSSCCCSC-CSS--------------------CCTTCSEEECTTSCCCEE-------------
T ss_pred cChhhccCCCCcCEEECCCCccccC-Ccc--------------------ccccCCEEECCCCcCCcc-------------
Confidence 3334444444444444444444321 110 013445555555554433
Q ss_pred eecccccccCCCCCCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCccc
Q 038003 366 FIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKL 445 (848)
Q Consensus 366 L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 445 (848)
.|..+..+++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|+|
T Consensus 208 -----------~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i 275 (330)
T 1xku_A 208 -----------DAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNI 275 (330)
T ss_dssp -----------CTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCC
T ss_pred -----------CHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcC
Confidence 3344444555555555555555444445555555555555555555 4455555566666666666666
Q ss_pred CCCCCCcccC------ccccceeccccCcCCC--CChhHHhhhcccceecccCcc
Q 038003 446 SSSIPKSIGN------LLKLHYLNLSNNQLSH--KIPTEFEKLIHLSELDLSHNI 492 (848)
Q Consensus 446 ~~~~p~~~~~------l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~ 492 (848)
++..+..|.. ...|+.|++++|.+.. ..|..|..+.+|+.++|++|+
T Consensus 276 ~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 276 SAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 6555554433 2556667777776652 456667777777777777764
No 257
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.8e-34 Score=315.97 Aligned_cols=199 Identities=21% Similarity=0.357 Sum_probs=153.6
Q ss_pred cCCcc-cceeccCCceeEEEEEcC---CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEee--cCC
Q 038003 599 DDFDE-KFCIGKGGQGSVYKAELP---SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCY--NGP 672 (848)
Q Consensus 599 ~~~~~-~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--~~~ 672 (848)
+.|++ .+.||+|+||+||+|.++ +++.||||++.... ..+.+.+|++++++++||||+++++++. ...
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS------CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC------CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 44666 457999999999999765 57889999986542 2246789999999999999999999995 467
Q ss_pred eeEEEEeccCCCCHHhHhcCC------CCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeee----CCCC
Q 038003 673 HSFLVCEYLDRGSLARILGDD------VTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL----DSNF 742 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~------~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~ 742 (848)
..++||||+.+ +|.+++... .....+++..+..|+.||+.||+|||++ +|+||||||+|||+ +.++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 89999999975 777766421 1223589999999999999999999999 99999999999999 6788
Q ss_pred CEEEeeccCccccCCCC---CCcccccccccccCccccccC-CCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 743 EAHVSDFGIAKFVGPHS---SNWTEFAGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 743 ~~kl~DfG~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.+||+|||+++...... ......+||+.|+|||++.+. .++.++|||||||++|||+||+.||..
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 99999999998765322 222456789999999999874 489999999999999999999999853
No 258
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.7e-34 Score=328.35 Aligned_cols=200 Identities=27% Similarity=0.450 Sum_probs=174.2
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
.++|++.+.||+|+||.||+|.+..+..||||+++... ...+++.+|++++++++||||+++++++.+ +..++|
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv 339 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence 46788999999999999999998888889999987642 235679999999999999999999999876 678999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||+++|+|.++++.. ....+++..+..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 340 ~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp ECCCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred eehhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 9999999999999643 224588999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 758 HSS-NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 758 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
... ......+++.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~ 467 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 467 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTT
T ss_pred CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 211 1123456789999999998899999999999999999999 9999864
No 259
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2e-33 Score=308.62 Aligned_cols=206 Identities=24% Similarity=0.273 Sum_probs=159.4
Q ss_pred HHHHHhhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeec
Q 038003 592 EEIIKATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYN 670 (848)
Q Consensus 592 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~ 670 (848)
.+.....++|++.+.||+|+||.||+|... +++.||||++.... .......+|++.++.++||||+++++++..
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~l~~l~h~niv~~~~~~~~ 90 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-----RFRNRELQIMQDLAVLHHPNIVQLQSYFYT 90 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-----TCCCHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-----cccHHHHHHHHHHHhcCCCCcccHHHhhhc
Confidence 455567789999999999999999999764 78999999985542 223345678888888999999999999865
Q ss_pred CCe-------eEEEEeccCCCCHHhHhcC-CCCcccCCHHHHHHHHHHHHHHHHHHh--hCCCCCeEEcCCCCCCeeeCC
Q 038003 671 GPH-------SFLVCEYLDRGSLARILGD-DVTAKELGWNRRINVIKGVANALSYLH--HDCLPSIIHRDISSKNVLLDS 740 (848)
Q Consensus 671 ~~~-------~~lV~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~qia~~L~~LH--~~~~~~ivH~Dlk~~NIll~~ 740 (848)
.+. .++||||++++ +.+.+.. ......+++..+..++.|++.|+.||| +. ||+||||||+||+++.
T Consensus 91 ~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~ 166 (360)
T 3e3p_A 91 LGERDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNE 166 (360)
T ss_dssp ECSSCTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEET
T ss_pred cccccccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeC
Confidence 433 78999999874 4433321 112356888999999999999999999 88 9999999999999997
Q ss_pred -CCCEEEeeccCccccCCCCCCcccccccccccCccccccCC-CCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 741 -NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 741 -~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
++.+||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|||+||+.||..
T Consensus 167 ~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 234 (360)
T 3e3p_A 167 ADGTLKLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRG 234 (360)
T ss_dssp TTTEEEECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCcEEEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCC
Confidence 8999999999998775433 234567899999999987654 89999999999999999999999864
No 260
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=4.6e-33 Score=304.91 Aligned_cols=200 Identities=27% Similarity=0.401 Sum_probs=170.0
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC-----
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG----- 671 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~----- 671 (848)
.++|++.+.||+|+||.||+|.+. +++.||||++.... .......+.+|++++++++||||+++++++...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 86 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENF 86 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc---cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence 568999999999999999999765 78999999986432 334556788999999999999999999988754
Q ss_pred CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccC
Q 038003 672 PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGI 751 (848)
Q Consensus 672 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 751 (848)
...++||||+.+ +|.+++.. ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~~-~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQT-DLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCSE-EHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccCc-cHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 678999999974 89888854 3588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC----------cccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 752 AKFVGPHSSN----------WTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 752 ~~~~~~~~~~----------~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
++........ ....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9876532211 123578999999998764 67899999999999999999999998643
No 261
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.1e-33 Score=298.64 Aligned_cols=205 Identities=24% Similarity=0.376 Sum_probs=158.6
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||.||+|.. .+++.||+|+++.... .....+.+.++...++.++||||+++++++.+.+..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C--HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC--cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 46799999999999999999965 5789999999876531 12223334555556888999999999999999999999
Q ss_pred EEeccCCCCHHhHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 677 VCEYLDRGSLARILGDD-VTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
||||+++ ++.+++... .....+++..+..++.|++.||+|||+++ ||+||||||+||+++.++.+||+|||.++..
T Consensus 84 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 84 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred EEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9999985 887766431 12356899999999999999999999842 8999999999999999999999999999876
Q ss_pred CCCCCCcccccccccccCcccc----ccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 756 GPHSSNWTEFAGTFGYAAPEIA----YTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 756 ~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
.... ......|++.|+|||++ .+..+++++||||+||++|||+||+.||+..
T Consensus 161 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 216 (290)
T 3fme_A 161 VDDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 216 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCC
T ss_pred cccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCcccc
Confidence 5432 22445789999999996 5567899999999999999999999998743
No 262
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.8e-33 Score=301.81 Aligned_cols=202 Identities=26% Similarity=0.429 Sum_probs=174.4
Q ss_pred hcCCcccceeccCCceeEEEEEc-----CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-----PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 672 (848)
.++|++.+.||+|+||.||+|.+ .+++.||||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 115 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC----CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC--
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC
Confidence 45689999999999999999973 36889999998764 3455678899999999999999999999987654
Q ss_pred --eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 673 --HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 673 --~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
..++||||+++++|.++++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 116 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 116 RRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred CCceEEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCc
Confidence 789999999999999999754 24588999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCC---cccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 751 IAKFVGPHSSN---WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 751 ~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
+++........ .....++..|+|||++.+..++.++||||||+++|||+||..||...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~ 251 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 251 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSH
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCC
Confidence 99887544321 12345677899999999888999999999999999999999997643
No 263
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=3.2e-33 Score=302.62 Aligned_cols=203 Identities=28% Similarity=0.424 Sum_probs=170.3
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEE--EEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCCe
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIV--AVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPH 673 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~v--avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~ 673 (848)
.++|++.+.||+|+||.||+|... ++..+ |+|+++... .....+.+.+|+++++++ +||||+++++++.+.+.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 100 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc---chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCc
Confidence 367999999999999999999664 55544 999886532 233456688999999999 99999999999999999
Q ss_pred eEEEEeccCCCCHHhHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC
Q 038003 674 SFLVCEYLDRGSLARILGDDV-------------TAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS 740 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~ 740 (848)
.++||||+++++|.+++.... ....+++..+..++.||+.||+|||++ ||+||||||+||+++.
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~ 177 (327)
T 1fvr_A 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGE 177 (327)
T ss_dssp EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECG
T ss_pred eEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcC
Confidence 999999999999999997642 234689999999999999999999999 9999999999999999
Q ss_pred CCCEEEeeccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 741 NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 741 ~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
++.+||+|||+++..... .......+++.|+|||++.+..+++++|||||||++|||+| |+.||..
T Consensus 178 ~~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~ 244 (327)
T 1fvr_A 178 NYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 244 (327)
T ss_dssp GGCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CCeEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCC
Confidence 999999999999754322 12233456889999999998889999999999999999998 9999854
No 264
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4e-33 Score=295.92 Aligned_cols=201 Identities=27% Similarity=0.419 Sum_probs=175.1
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
..++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS--SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc--hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 4568999999999999999999765 7899999998765422 345677899999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCC---CCEEEeeccCc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSN---FEAHVSDFGIA 752 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~kl~DfG~~ 752 (848)
+||||+++++|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+||+++.+ +.+||+|||.+
T Consensus 98 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 999999999999888644 4688999999999999999999999 99999999999999754 47999999999
Q ss_pred cccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 753 KFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 753 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
....... ......|++.|+|||++.+. ++.++||||||+++|+|+||+.||..
T Consensus 172 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~ 224 (287)
T 2wei_A 172 TCFQQNT-KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYG 224 (287)
T ss_dssp GTBCCCS-SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eeecCCC-ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCC
Confidence 8765432 22445689999999998764 88999999999999999999999854
No 265
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.2e-33 Score=296.52 Aligned_cols=196 Identities=30% Similarity=0.472 Sum_probs=164.1
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC-CeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG-PHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-~~~~l 676 (848)
.++|++.+.||+|+||.||+|... ++.||||+++.. ...+.+.+|++++++++||||+++++++.+. +..++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC------C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch------hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 467999999999999999999875 889999998653 2456788999999999999999999997654 47899
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccC
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVG 756 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~ 756 (848)
||||+++++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+....
T Consensus 93 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp EECCCTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred EEecCCCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 99999999999998654 123478899999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 757 PHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 757 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
... ....+++.|+|||++.+..+++++||||||+++|||+| |+.||..
T Consensus 169 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 217 (278)
T 1byg_A 169 STQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 217 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT
T ss_pred ccc---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCC
Confidence 322 23467889999999998889999999999999999998 9999864
No 266
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.7e-33 Score=311.94 Aligned_cols=198 Identities=26% Similarity=0.328 Sum_probs=168.5
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC--------CCcccceEEEe
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR--------HRNNVKFHGFC 668 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--------hp~iv~l~~~~ 668 (848)
.++|++.+.||+|+||+||+|.. .+++.||||+++.. ....+.+.+|+++++.++ ||||+++++++
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence 46799999999999999999965 57889999998643 344567889999999885 78899999998
Q ss_pred e----cCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC--
Q 038003 669 Y----NGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF-- 742 (848)
Q Consensus 669 ~----~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-- 742 (848)
. +....++||||+. +++.+.+... ....+++..+..++.||+.||+|||+++ ||+||||||+|||++.++
T Consensus 111 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 111 KISGVNGTHICMVFEVLG-HHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp EEEETTEEEEEEEECCCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred eecCCCCceEEEEEeccC-ccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 7 5568899999995 4565555433 2246899999999999999999999964 899999999999999775
Q ss_pred -----------------------------------------------CEEEeeccCccccCCCCCCcccccccccccCcc
Q 038003 743 -----------------------------------------------EAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775 (848)
Q Consensus 743 -----------------------------------------------~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE 775 (848)
.+||+|||.++..... .....||+.|+|||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE 263 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLE 263 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHH
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCCh
Confidence 7999999999876542 34457899999999
Q ss_pred ccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 776 IAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 776 ~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
++.+..++.++|||||||++|||+||+.||..
T Consensus 264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 295 (397)
T 1wak_A 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEP 295 (397)
T ss_dssp HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCC
Confidence 99999999999999999999999999999864
No 267
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.8e-33 Score=300.21 Aligned_cols=199 Identities=23% Similarity=0.355 Sum_probs=163.6
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEee-------
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCY------- 669 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~------- 669 (848)
.++|++.+.||+|+||.||+|... +++.||+|++... +....+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 85 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT----DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT 85 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC----ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc
Confidence 467999999999999999999765 5899999998654 3455678899999999999999999999874
Q ss_pred -------cCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeC-CC
Q 038003 670 -------NGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD-SN 741 (848)
Q Consensus 670 -------~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~ 741 (848)
+....++||||++ |+|.++++. ..+++..+..++.||+.||+|||++ ||+||||||+||+++ ++
T Consensus 86 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 157 (320)
T 2i6l_A 86 DDVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTED 157 (320)
T ss_dssp C----CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTT
T ss_pred cccccccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCC
Confidence 3467899999998 599998854 4588899999999999999999999 999999999999997 56
Q ss_pred CCEEEeeccCccccCCCC---CCcccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 742 FEAHVSDFGIAKFVGPHS---SNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 742 ~~~kl~DfG~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
+.+||+|||.++...... .......+++.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 228 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA 228 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCC
Confidence 799999999998764321 12234567899999998865 67899999999999999999999998643
No 268
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=8.6e-33 Score=302.58 Aligned_cols=196 Identities=24% Similarity=0.414 Sum_probs=166.7
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCe---
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPH--- 673 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~--- 673 (848)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 100 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 100 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccc
Confidence 46799999999999999999965 478999999987643 123446778899999999999999999999987654
Q ss_pred ---eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 674 ---SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 674 ---~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
.++||||++ ++|.+++. ..+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 101 FYDFYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CCCCEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecc
Confidence 499999998 48887764 2488999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCCcccccccccccCcccccc-CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSSNWTEFAGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.++..... .....|++.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 172 ~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 226 (353)
T 3coi_A 172 LARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 226 (353)
T ss_dssp CTTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBS
T ss_pred cccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99875432 244678999999999876 6789999999999999999999999864
No 269
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=7e-33 Score=301.48 Aligned_cols=198 Identities=21% Similarity=0.303 Sum_probs=172.1
Q ss_pred hcCCcccceeccCCceeEEEEEc--CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCC------cccceEEEee
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL--PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR------NNVKFHGFCY 669 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp------~iv~l~~~~~ 669 (848)
.++|++.+.||+|+||+||+|.. .+++.||||+++.. ....+.+.+|+++++.++|+ +++++++++.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~ 87 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE 87 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence 46799999999999999999965 36889999998643 24456788899998888665 4999999999
Q ss_pred cCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC---------
Q 038003 670 NGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS--------- 740 (848)
Q Consensus 670 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~--------- 740 (848)
+.+..++||||+ +++|.+++... ....+++..+..++.||+.||+|||++ ||+||||||+||+++.
T Consensus 88 ~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~ 162 (339)
T 1z57_A 88 HHGHICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNP 162 (339)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC-
T ss_pred cCCcEEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCC
Confidence 999999999999 78999988655 224688999999999999999999999 9999999999999987
Q ss_pred ----------CCCEEEeeccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 741 ----------NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 741 ----------~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
++.+||+|||.++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 163 KIKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp ---CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 678999999999875432 24467899999999999989999999999999999999999998643
No 270
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.1e-33 Score=303.08 Aligned_cols=203 Identities=24% Similarity=0.338 Sum_probs=157.9
Q ss_pred hhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC-CCcccceEEEee-----
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-HRNNVKFHGFCY----- 669 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~----- 669 (848)
...+|++.+.||+|+||.||+|.+ .+++.||||++... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~ 101 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN----EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEE 101 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES----SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTT
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC----chHHHHHHHHHHHHHHHhccCCChhhccccccccccc
Confidence 345799999999999999999975 47899999998554 3455677889999999995 999999999984
Q ss_pred ---cCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEcCCCCCCeeeCCCCCE
Q 038003 670 ---NGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPS--IIHRDISSKNVLLDSNFEA 744 (848)
Q Consensus 670 ---~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~ 744 (848)
.....++||||+. |+|.+++........+++..+..++.||+.||+|||++ + |+||||||+||+++.++.+
T Consensus 102 ~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~ 177 (337)
T 3ll6_A 102 SDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTI 177 (337)
T ss_dssp STTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCE
T ss_pred cccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCE
Confidence 3345799999996 58988876533345699999999999999999999999 8 9999999999999999999
Q ss_pred EEeeccCccccCCCCCC------------cccccccccccCcccc---ccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 745 HVSDFGIAKFVGPHSSN------------WTEFAGTFGYAAPEIA---YTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 745 kl~DfG~~~~~~~~~~~------------~~~~~g~~~y~aPE~~---~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
||+|||+++........ .....|++.|+|||++ .+..+++++|||||||++|||+||+.||..
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 255 (337)
T 3ll6_A 178 KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255 (337)
T ss_dssp EBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred EEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 99999999877543221 1135689999999998 566788999999999999999999999864
No 271
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=3.9e-37 Score=350.29 Aligned_cols=111 Identities=23% Similarity=0.120 Sum_probs=64.2
Q ss_pred CCccEEEccCCccCCC----CcccccccccccEEEccCCcCCCCCCcccCC-----CCccCeEeccCcccCC----CCCC
Q 038003 385 PKLQVLDLSSNHIVGK----IPVQLEMLSSLNKLILNLNQLSGGVPLEFGS-----LTKLQYLDLSTNKLSS----SIPK 451 (848)
Q Consensus 385 ~~L~~L~Ls~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~----~~p~ 451 (848)
++|++|++++|.+++. ++..+..+++|++|++++|.+++..+..+.. .++|++|++++|++++ .+|.
T Consensus 313 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 392 (461)
T 1z7x_W 313 CQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA 392 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred ccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHH
Confidence 4566666666666544 3444555666666666666665443333322 4567777777777764 5566
Q ss_pred cccCccccceeccccCcCCCCChhHHhh-----hcccceecccCcccCc
Q 038003 452 SIGNLLKLHYLNLSNNQLSHKIPTEFEK-----LIHLSELDLSHNILQE 495 (848)
Q Consensus 452 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~ 495 (848)
.+..+++|++|+|++|++++.....+.+ ..+|+.|++.++.+..
T Consensus 393 ~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 393 TLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp HHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred HHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCH
Confidence 6666777777777777776543333321 1245566655555543
No 272
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=5.8e-33 Score=298.66 Aligned_cols=202 Identities=22% Similarity=0.329 Sum_probs=169.0
Q ss_pred HhhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC--CCcccceEEEeecCCe
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR--HRNNVKFHGFCYNGPH 673 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~l~~~~~~~~~ 673 (848)
...++|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|++++++++ ||||+++++++.+.+.
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc--cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence 34577999999999999999999888899999999876432 3345677899999999997 5999999999999999
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
.++||| +.+++|.+++... ..+++..+..++.||+.||.|||++ +|+||||||+||+++ ++.+||+|||+++
T Consensus 103 ~~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~ 174 (313)
T 3cek_A 103 IYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIAN 174 (313)
T ss_dssp EEEEEC-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred EEEEEe-cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeeccccc
Confidence 999999 5678999998754 4688899999999999999999999 999999999999996 4899999999998
Q ss_pred ccCCCCCC--cccccccccccCcccccc-----------CCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 754 FVGPHSSN--WTEFAGTFGYAAPEIAYT-----------MRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 754 ~~~~~~~~--~~~~~g~~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
........ .....|++.|+|||++.+ ..++.++||||||+++|||+||+.||..
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 241 (313)
T 3cek_A 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241 (313)
T ss_dssp C--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhh
Confidence 76543221 234578999999999875 4678899999999999999999999864
No 273
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=9.1e-33 Score=312.19 Aligned_cols=199 Identities=23% Similarity=0.340 Sum_probs=170.7
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCC-CcccceEEEeecCCeeE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH-RNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~l~~~~~~~~~~~ 675 (848)
.++|++.+.||+|+||.||+|.+ .+++.||||++..... .+++.+|+++++.++| +++..+..++.+.+..+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~------~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK------HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS------SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc------cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEE
Confidence 46799999999999999999975 5799999998765431 2347789999999977 55666667777888999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeee---CCCCCEEEeeccCc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL---DSNFEAHVSDFGIA 752 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfG~~ 752 (848)
+||||+ +++|.++++.. ...+++..+..|+.||+.||+|||++ +||||||||+|||+ +.++.+||+|||++
T Consensus 80 lvme~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (483)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEECC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcc
Confidence 999999 88999998643 35689999999999999999999999 99999999999999 58899999999999
Q ss_pred cccCCCCCC-------cccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 753 KFVGPHSSN-------WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 753 ~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
+.+...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~ 216 (483)
T 3sv0_A 154 KKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL 216 (483)
T ss_dssp EECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred eeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence 877543321 12567999999999999999999999999999999999999998653
No 274
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5e-33 Score=301.91 Aligned_cols=198 Identities=21% Similarity=0.287 Sum_probs=146.5
Q ss_pred hhcCCcccc-eeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeec----
Q 038003 597 ATDDFDEKF-CIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYN---- 670 (848)
Q Consensus 597 ~~~~~~~~~-~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~---- 670 (848)
..++|.+.+ .||+|+||+||+|... +++.||||++... .... ......++.++||||+++++++..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 97 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKAR---QEVDHHWQASGGPHIVCILDVYENMHHG 97 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHH---HHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHH---HHHHHHHHhcCCCChHHHHHHHhhccCC
Confidence 356788854 6999999999999665 7999999998543 1111 222233566799999999999876
Q ss_pred CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC---CCCEEEe
Q 038003 671 GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS---NFEAHVS 747 (848)
Q Consensus 671 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~ 747 (848)
....++||||+++|+|.+++... ....+++..+..++.||+.||.|||++ ||+||||||+||+++. ++.+||+
T Consensus 98 ~~~~~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 98 KRCLLIIMECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred CceEEEEEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEe
Confidence 44589999999999999999765 234689999999999999999999999 9999999999999976 4559999
Q ss_pred eccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 748 DFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 748 DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
|||+++..... ......||+.|+|||++.+..+++++|||||||++|+|+||+.||...
T Consensus 174 Dfg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 232 (336)
T 3fhr_A 174 DFGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN 232 (336)
T ss_dssp CCTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred ccccceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 99999876532 234567899999999998888999999999999999999999998543
No 275
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=4.1e-33 Score=296.48 Aligned_cols=204 Identities=27% Similarity=0.405 Sum_probs=164.3
Q ss_pred hcCCcccceeccCCceeEEEEEcC--CCC--EEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCe
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP--SGD--IVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPH 673 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~ 673 (848)
.++|++.+.||+|+||.||+|.+. +++ .||||+++..... .....+.+.+|++++++++||||+++++++.+..
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS-QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence 467999999999999999999753 333 6899998765332 2345678899999999999999999999998765
Q ss_pred eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 674 SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 674 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
.++||||+++++|.+++... ...+++..+..++.||+.||.|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred ceeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 88999999999999998653 24688999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 754 FVGPHSSN---WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 754 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
........ .....+++.|+|||++.+..+++++||||||+++|||+| |+.||...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 228 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 228 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC
Confidence 87543322 123457789999999998889999999999999999999 99998643
No 276
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.2e-33 Score=301.71 Aligned_cols=204 Identities=28% Similarity=0.402 Sum_probs=170.6
Q ss_pred hcCCcccceeccCCceeEEEEEc------CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecC
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNG 671 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~ 671 (848)
.++|++.+.||+|+||.||+|.+ .++..||||++.... ......++.+|+.++++++||||+++++++.+.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc---chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence 46799999999999999999974 357789999986542 334566788999999999999999999999999
Q ss_pred CeeEEEEeccCCCCHHhHhcCCCC----cccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC---CCCE
Q 038003 672 PHSFLVCEYLDRGSLARILGDDVT----AKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS---NFEA 744 (848)
Q Consensus 672 ~~~~lV~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~ 744 (848)
+..++||||+++++|.++++.... ...+++..+..++.||+.||.|||++ ||+||||||+||+++. +..+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceE
Confidence 999999999999999999875421 24588999999999999999999999 9999999999999984 4469
Q ss_pred EEeeccCccccCCCCC--CcccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 745 HVSDFGIAKFVGPHSS--NWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 745 kl~DfG~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
||+|||.+........ ......|++.|+|||++.+..+++++||||||+++|||+| |+.||..
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 248 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999976533221 1233567899999999998889999999999999999999 9999864
No 277
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.9e-33 Score=297.62 Aligned_cols=194 Identities=29% Similarity=0.474 Sum_probs=162.5
Q ss_pred hhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeec-----
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYN----- 670 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~----- 670 (848)
..++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchh
Confidence 356799999999999999999975 47999999998543 2445778899999999999999999998865
Q ss_pred --------CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCC
Q 038003 671 --------GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNF 742 (848)
Q Consensus 671 --------~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 742 (848)
.+..++||||+++++|.++++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~ 153 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESR 153 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTS
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCC
Confidence 35679999999999999999754 24577889999999999999999999 999999999999999999
Q ss_pred CEEEeeccCccccCCCC--------------CCcccccccccccCccccccC-CCCccchhhhHHHHHHHHHh
Q 038003 743 EAHVSDFGIAKFVGPHS--------------SNWTEFAGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIK 800 (848)
Q Consensus 743 ~~kl~DfG~~~~~~~~~--------------~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwSlG~il~ellt 800 (848)
.+||+|||.+....... .......|++.|+|||++.+. .++.++|||||||++|||+|
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 99999999998764321 122345789999999998864 68999999999999999998
No 278
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.3e-34 Score=306.79 Aligned_cols=189 Identities=28% Similarity=0.431 Sum_probs=149.6
Q ss_pred hcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhc--CCCCcccceEEEeecCC---
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE--IRHRNNVKFHGFCYNGP--- 672 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~--l~hp~iv~l~~~~~~~~--- 672 (848)
.++|++.+.||+|+||.||+|.+. ++.||||++... ....+.+|.+++.. ++||||+++++++....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 73 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSS
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCcc
Confidence 367999999999999999999875 889999998543 34567778888877 79999999999998776
Q ss_pred -eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEEcCCCCCCeeeCCCCC
Q 038003 673 -HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH--------HDCLPSIIHRDISSKNVLLDSNFE 743 (848)
Q Consensus 673 -~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH--------~~~~~~ivH~Dlk~~NIll~~~~~ 743 (848)
..++||||+++|+|.++++.. .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.
T Consensus 74 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~ 146 (303)
T 3gxj_A 74 TQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT 146 (303)
T ss_dssp EEEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCC
T ss_pred ceeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCC
Confidence 789999999999999999543 4677888999999999999999 77 9999999999999999999
Q ss_pred EEEeeccCccccCCCCCC----cccccccccccCccccccC------CCCccchhhhHHHHHHHHHhC
Q 038003 744 AHVSDFGIAKFVGPHSSN----WTEFAGTFGYAAPEIAYTM------RATEKYDVYSFGVLVFEVIKG 801 (848)
Q Consensus 744 ~kl~DfG~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltg 801 (848)
+||+|||+++........ .....||+.|+|||++.+. .+++++|||||||++|||+||
T Consensus 147 ~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g 214 (303)
T 3gxj_A 147 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214 (303)
T ss_dssp C-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGG
T ss_pred EEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhc
Confidence 999999999776543322 1234799999999998766 445789999999999999999
No 279
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=6e-33 Score=325.07 Aligned_cols=195 Identities=28% Similarity=0.423 Sum_probs=165.4
Q ss_pred ceeccCCceeEEEEEcC---CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEEEecc
Q 038003 605 FCIGKGGQGSVYKAELP---SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLVCEYL 681 (848)
Q Consensus 605 ~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV~e~~ 681 (848)
+.||+|+||+||+|.+. .++.||||+++.... .....+++.+|++++++++|||||++++++.. +..++||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG--CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEcc
Confidence 47999999999999542 567899999976532 33456789999999999999999999999965 4688999999
Q ss_pred CCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCCCCCC
Q 038003 682 DRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSN 761 (848)
Q Consensus 682 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~~~~~ 761 (848)
++|+|.++++.. ..+++..+..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+++.+......
T Consensus 452 ~~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 452 ELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp TTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 999999999654 5689999999999999999999999 9999999999999999999999999999877543321
Q ss_pred ---cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCccc
Q 038003 762 ---WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFF 808 (848)
Q Consensus 762 ---~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~~ 808 (848)
.....+++.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 576 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 576 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 223456789999999999999999999999999999999 99998643
No 280
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.2e-33 Score=302.79 Aligned_cols=243 Identities=21% Similarity=0.288 Sum_probs=192.1
Q ss_pred HhhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCc--hhHHHHHHHHHHHhcCC--CCcccceEEEeec
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNM--ADHDEFLNEVLALKEIR--HRNNVKFHGFCYN 670 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~--~~~~~~~~E~~~l~~l~--hp~iv~l~~~~~~ 670 (848)
...++|++.+.||+|+||.||+|.. .+++.||||++......... ...+.+.+|+.++++++ ||||+++++++.+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 4467899999999999999999965 57899999999776432110 12244667999999996 5999999999999
Q ss_pred CCeeEEEEeccCC-CCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeC-CCCCEEEee
Q 038003 671 GPHSFLVCEYLDR-GSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD-SNFEAHVSD 748 (848)
Q Consensus 671 ~~~~~lV~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~kl~D 748 (848)
.+..++|||++.+ ++|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++ +++.+||+|
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~D 193 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLID 193 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred CCcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEee
Confidence 9999999999986 8999998654 5688999999999999999999999 999999999999999 789999999
Q ss_pred ccCccccCCCCCCcccccccccccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCccccccc-------cccchhhh
Q 038003 749 FGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINF-------SSFSNMII 820 (848)
Q Consensus 749 fG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~P~~~~~~~~-------~~~~~~~~ 820 (848)
||+++..... ......||+.|+|||++.+..+ ++++||||||+++|||+||+.||....... ..+...+.
T Consensus 194 fg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 271 (320)
T 3a99_A 194 FGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 271 (320)
T ss_dssp CTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHH
T ss_pred Cccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcccccccccCCHHHH
Confidence 9999877542 2345679999999999887665 688999999999999999999986533211 12333444
Q ss_pred hhhhhcCCCCCCCCCCcccccceeec
Q 038003 821 DVNKILDPRLPTPSPSVMDYGGCHFM 846 (848)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (848)
++...+-..-|..||.+.+.....|+
T Consensus 272 ~li~~~l~~dp~~Rps~~~ll~hp~~ 297 (320)
T 3a99_A 272 HLIRWCLALRPSDRPTFEEIQNHPWM 297 (320)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred HHHHHHccCChhhCcCHHHHhcCHhh
Confidence 44444444555666666665555544
No 281
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.98 E-value=7.3e-33 Score=319.06 Aligned_cols=203 Identities=29% Similarity=0.428 Sum_probs=175.8
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeec------
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYN------ 670 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------ 670 (848)
.++|++.+.||+|+||.||+|.+ .+++.||||+++... .....+.+.+|++++++++||||+++++++..
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~---~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL---SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC---CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 36899999999999999999966 478999999987642 34556778999999999999999999999765
Q ss_pred CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCC---EEEe
Q 038003 671 GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFE---AHVS 747 (848)
Q Consensus 671 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~ 747 (848)
.+..++||||+++|+|.+++........+++..+..++.|++.||+|||+. ||+||||||+||+++.++. +||+
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 667899999999999999998764445688899999999999999999999 9999999999999997765 9999
Q ss_pred eccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 748 DFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 748 DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
|||.+....... ......|++.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 167 DFG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 167 DLGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp SCCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 999998875433 33556899999999999999999999999999999999999999853
No 282
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.98 E-value=3.7e-33 Score=300.01 Aligned_cols=244 Identities=22% Similarity=0.274 Sum_probs=182.3
Q ss_pred HHhhcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCc--hhHHHHHHHHHHHhcC----CCCcccceEEE
Q 038003 595 IKATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNM--ADHDEFLNEVLALKEI----RHRNNVKFHGF 667 (848)
Q Consensus 595 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~--~~~~~~~~E~~~l~~l----~hp~iv~l~~~ 667 (848)
....++|++.+.||+|+||.||+|.. .+++.||||+++........ .....+.+|+.+++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34567899999999999999999966 47899999999765322111 1223355788888888 89999999999
Q ss_pred eecCCeeEEEEec-cCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeC-CCCCEE
Q 038003 668 CYNGPHSFLVCEY-LDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD-SNFEAH 745 (848)
Q Consensus 668 ~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~k 745 (848)
+...+..++|||| +.+++|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++ .++.+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEE
Confidence 9999999999999 7899999998654 4689999999999999999999999 999999999999999 889999
Q ss_pred EeeccCccccCCCCCCcccccccccccCccccccCCC-CccchhhhHHHHHHHHHhCCCCCccccccc-------cccch
Q 038003 746 VSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINF-------SSFSN 817 (848)
Q Consensus 746 l~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~P~~~~~~~~-------~~~~~ 817 (848)
|+|||.++..... ......|++.|+|||++.+..+ +.++||||||+++|||+||+.||....... ..+..
T Consensus 181 l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 258 (312)
T 2iwi_A 181 LIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSP 258 (312)
T ss_dssp ECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHTCCCCCTTSCH
T ss_pred EEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhhccCCcccCCH
Confidence 9999999877543 2345678999999999887666 458999999999999999999986432210 12233
Q ss_pred hhhhhhhhcCCCCCCCCCCcccccceeec
Q 038003 818 MIIDVNKILDPRLPTPSPSVMDYGGCHFM 846 (848)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (848)
.+.++...+-..-|..||...+...+.|+
T Consensus 259 ~~~~li~~~l~~~p~~Rps~~e~l~~~~~ 287 (312)
T 2iwi_A 259 DCCALIRRCLAPKPSSRPSLEEILLDPWM 287 (312)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHSTTT
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 33444444444455666666655554444
No 283
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.98 E-value=6.4e-33 Score=301.54 Aligned_cols=198 Identities=29% Similarity=0.420 Sum_probs=160.8
Q ss_pred hhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHH--HhcCCCCcccceEEEeec----
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLA--LKEIRHRNNVKFHGFCYN---- 670 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~--l~~l~hp~iv~l~~~~~~---- 670 (848)
..++|++.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++..
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 82 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTAD 82 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-------hhhHHHHHHHHHHHhccCcchhhheecccccccC
Confidence 346899999999999999999976 58999999986532 2334444444 556899999999985432
Q ss_pred -CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCC------CCCeEEcCCCCCCeeeCCCCC
Q 038003 671 -GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC------LPSIIHRDISSKNVLLDSNFE 743 (848)
Q Consensus 671 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~------~~~ivH~Dlk~~NIll~~~~~ 743 (848)
....++||||+++|+|.++++.. ..++..+..++.||+.||+|||+.+ .++|+||||||+||+++.++.
T Consensus 83 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 158 (336)
T 3g2f_A 83 GRMEYLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGT 158 (336)
T ss_dssp SCEEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSC
T ss_pred CCceEEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCc
Confidence 23678999999999999999644 3478899999999999999999863 238999999999999999999
Q ss_pred EEEeeccCccccCCCC--------CCcccccccccccCcccccc-------CCCCccchhhhHHHHHHHHHhCCCCCc
Q 038003 744 AHVSDFGIAKFVGPHS--------SNWTEFAGTFGYAAPEIAYT-------MRATEKYDVYSFGVLVFEVIKGNHPRD 806 (848)
Q Consensus 744 ~kl~DfG~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~-------~~~~~~~DiwSlG~il~elltg~~P~~ 806 (848)
+||+|||+++.+.... .......||+.|+|||++.+ ..+++++|||||||++|||+||+.||.
T Consensus 159 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~ 236 (336)
T 3g2f_A 159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLF 236 (336)
T ss_dssp EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGS
T ss_pred EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCC
Confidence 9999999998764321 11234579999999999886 456788999999999999999988864
No 284
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=3.3e-32 Score=296.01 Aligned_cols=195 Identities=27% Similarity=0.432 Sum_probs=161.5
Q ss_pred HhhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC--CCCcccceEEEeecC--
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI--RHRNNVKFHGFCYNG-- 671 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l--~hp~iv~l~~~~~~~-- 671 (848)
...++|++.+.||+|+||.||+|.+. ++.||||++... ....+.+|.+++... +||||+++++++...
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-------EEASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 34568999999999999999999875 899999998543 233445566665554 999999999999887
Q ss_pred --CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCC-----CCCeEEcCCCCCCeeeCCCCCE
Q 038003 672 --PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC-----LPSIIHRDISSKNVLLDSNFEA 744 (848)
Q Consensus 672 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~-----~~~ivH~Dlk~~NIll~~~~~~ 744 (848)
...++||||+++|+|.++++.. .+++..+..++.|++.||+|||+++ .++|+||||||+||+++.++.+
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 6889999999999999999543 5889999999999999999999752 2389999999999999999999
Q ss_pred EEeeccCccccCCCCCCc----ccccccccccCccccccCCCCcc------chhhhHHHHHHHHHhCC
Q 038003 745 HVSDFGIAKFVGPHSSNW----TEFAGTFGYAAPEIAYTMRATEK------YDVYSFGVLVFEVIKGN 802 (848)
Q Consensus 745 kl~DfG~~~~~~~~~~~~----~~~~g~~~y~aPE~~~~~~~~~~------~DiwSlG~il~elltg~ 802 (848)
||+|||+++.+....... ....||+.|+|||++.+..++.+ +|||||||++|||+||.
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~ 249 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRC 249 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTB
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhcc
Confidence 999999998765433221 24579999999999987766554 99999999999999993
No 285
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.98 E-value=1.6e-32 Score=297.19 Aligned_cols=204 Identities=26% Similarity=0.361 Sum_probs=151.9
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHH-HHhcCCCCcccceEEEeecCCeeE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVL-ALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
.++|+..+.||+|+||.||+|... +++.||||+++... ......++..|+. +++.++||||+++++++.+.+..+
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~ 97 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV---DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCW 97 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC---CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc---CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceE
Confidence 367999999999999999999764 78999999987653 2334455666666 678889999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCC--CCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 676 LVCEYLDRGSLARILGDD--VTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
+||||+++ +|.+++... .....+++..+..++.|++.||.|||+.. ||+||||||+||+++.++.+||+|||+++
T Consensus 98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 174 (327)
T 3aln_A 98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISG 174 (327)
T ss_dssp EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence 99999986 777766421 11356889999999999999999999852 89999999999999999999999999998
Q ss_pred ccCCCCCCcccccccccccCcccc----ccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 754 FVGPHSSNWTEFAGTFGYAAPEIA----YTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 754 ~~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
...... ......|++.|+|||++ .+..++.++|||||||++|||+||+.||...
T Consensus 175 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 232 (327)
T 3aln_A 175 QLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW 232 (327)
T ss_dssp C-------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC
T ss_pred eccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 765432 22345789999999998 4566899999999999999999999998653
No 286
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.98 E-value=2.6e-32 Score=301.97 Aligned_cols=198 Identities=25% Similarity=0.294 Sum_probs=169.9
Q ss_pred hhcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC-CC-----cccceEEEee
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-HR-----NNVKFHGFCY 669 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp-----~iv~l~~~~~ 669 (848)
..++|++.+.||+|+||+||+|... +++.||||+++.. ....+++.+|+++++.++ |+ +|+++++++.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 4578999999999999999999654 7889999998643 234566778888888774 44 4999999999
Q ss_pred cCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhh--CCCCCeEEcCCCCCCeeeC--CCCCEE
Q 038003 670 NGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHH--DCLPSIIHRDISSKNVLLD--SNFEAH 745 (848)
Q Consensus 670 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~--~~~~~ivH~Dlk~~NIll~--~~~~~k 745 (848)
..+..++||||+++ +|.+++... ....+++..+..++.|++.||.|||. . |||||||||+||+++ .++.+|
T Consensus 127 ~~~~~~lv~e~~~~-~L~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~~---~ivHrDlkp~NIll~~~~~~~~k 201 (382)
T 2vx3_A 127 FRNHLCLVFEMLSY-NLYDLLRNT-NFRGVSLNLTRKFAQQMCTALLFLATPEL---SIIHCDLKPENILLCNPKRSAIK 201 (382)
T ss_dssp ETTEEEEEEECCCC-BHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHTSTTT---CEECCCCSGGGEEESSTTSCCEE
T ss_pred cCCceEEEEecCCC-CHHHHHhhc-CcCCCCHHHHHHHHHHHHHHHHHhccCCC---CEEcCCCCcccEEEecCCCCcEE
Confidence 99999999999965 999988654 22458999999999999999999994 5 899999999999994 578899
Q ss_pred EeeccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 746 VSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 746 l~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
|+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 202 L~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 202 IVDFGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp ECCCTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEeccCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999887542 2456789999999999999999999999999999999999999864
No 287
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.98 E-value=3e-32 Score=297.03 Aligned_cols=198 Identities=27% Similarity=0.404 Sum_probs=169.7
Q ss_pred HHhhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhc--CCCCcccceEEEeecCC
Q 038003 595 IKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKE--IRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 595 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~--l~hp~iv~l~~~~~~~~ 672 (848)
....++|++.+.||+|+||.||+|.+ +++.||||++... ..+.+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 34457899999999999999999987 4899999998543 34567788888877 79999999999998876
Q ss_pred ----eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEEcCCCCCCeeeCC
Q 038003 673 ----HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLH--------HDCLPSIIHRDISSKNVLLDS 740 (848)
Q Consensus 673 ----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH--------~~~~~~ivH~Dlk~~NIll~~ 740 (848)
..++||||+++|+|.++++. ..+++..+..++.|++.||+||| +. +|+||||||+||+++.
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~ 182 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKK 182 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECT
T ss_pred CccceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECC
Confidence 78999999999999999964 35889999999999999999999 77 9999999999999999
Q ss_pred CCCEEEeeccCccccCCCCCC----cccccccccccCccccccC------CCCccchhhhHHHHHHHHHhC---------
Q 038003 741 NFEAHVSDFGIAKFVGPHSSN----WTEFAGTFGYAAPEIAYTM------RATEKYDVYSFGVLVFEVIKG--------- 801 (848)
Q Consensus 741 ~~~~kl~DfG~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltg--------- 801 (848)
++.+||+|||++......... .....||+.|+|||++.+. .+++++|||||||++|||+||
T Consensus 183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~ 262 (342)
T 1b6c_B 183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 262 (342)
T ss_dssp TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccc
Confidence 999999999999877543321 2345789999999998765 334789999999999999999
Q ss_pred -CCCCcc
Q 038003 802 -NHPRDF 807 (848)
Q Consensus 802 -~~P~~~ 807 (848)
+.||..
T Consensus 263 ~~~p~~~ 269 (342)
T 1b6c_B 263 YQLPYYD 269 (342)
T ss_dssp CCCTTTT
T ss_pred cccCccc
Confidence 778754
No 288
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.98 E-value=4e-32 Score=297.59 Aligned_cols=197 Identities=23% Similarity=0.327 Sum_probs=168.9
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CC-CEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCc------ccceEEEee
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SG-DIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN------NVKFHGFCY 669 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~------iv~l~~~~~ 669 (848)
.++|++.+.||+|+||+||+|... ++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 92 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN 92 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence 468999999999999999999764 44 68999998643 244567788999999887665 899999999
Q ss_pred cCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeee-----------
Q 038003 670 NGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL----------- 738 (848)
Q Consensus 670 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll----------- 738 (848)
..+..++||||+ ++++.+++... ....+++..+..++.||+.||+|||++ ||+||||||+||++
T Consensus 93 ~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 93 FHGHMCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECC
T ss_pred eCCeEEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccc
Confidence 999999999999 55666666543 224689999999999999999999999 99999999999999
Q ss_pred --------CCCCCEEEeeccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 739 --------DSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 739 --------~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 241 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 241 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 56789999999999875432 2446799999999999999999999999999999999999999864
No 289
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=1.7e-32 Score=302.89 Aligned_cols=199 Identities=22% Similarity=0.296 Sum_probs=168.9
Q ss_pred hcCCcccceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC-----------CCcccceE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-----------HRNNVKFH 665 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------hp~iv~l~ 665 (848)
.++|++.+.||+|+||+||+|.. .+++.||||++... ....+.+.+|++++++++ ||||++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~ 92 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 92 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCC
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHH
Confidence 46799999999999999999965 57899999998643 234567788999988886 89999999
Q ss_pred EEeecCC----eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeC--
Q 038003 666 GFCYNGP----HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD-- 739 (848)
Q Consensus 666 ~~~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~-- 739 (848)
+++...+ ..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+++ ||+||||||+||+++
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 93 DHFNHKGPNGVHVVMVFEVL-GENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EEEEEEETTEEEEEEEECCC-CEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEE
T ss_pred HHhhccCCCCceEEEEEecC-CCCHHHHHHHh-hccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEecc
Confidence 9987654 789999999 88999988654 2345889999999999999999999953 899999999999994
Q ss_pred ----CCCCEEEeeccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 740 ----SNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 740 ----~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 238 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred CCCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 4458999999999876542 23457899999999999999999999999999999999999998643
No 290
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=1.4e-32 Score=308.76 Aligned_cols=198 Identities=25% Similarity=0.369 Sum_probs=157.2
Q ss_pred cCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCCeeEEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lV 677 (848)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv 87 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIA 87 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEE
Confidence 345556889999999998877678999999998543 235678899999876 899999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCccc----CCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCC------------
Q 038003 678 CEYLDRGSLARILGDDVTAKE----LGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSN------------ 741 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~----l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~------------ 741 (848)
|||+. |+|.+++........ ..+..+..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 88 ~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~ 163 (434)
T 2rio_A 88 LELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAE 163 (434)
T ss_dssp ECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCC
T ss_pred EecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCC
Confidence 99996 599999976422111 12334578999999999999999 99999999999999654
Q ss_pred -CCEEEeeccCccccCCCCCC----cccccccccccCcccccc-------CCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 742 -FEAHVSDFGIAKFVGPHSSN----WTEFAGTFGYAAPEIAYT-------MRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 742 -~~~kl~DfG~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~-------~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
+.+||+|||+++........ ....+||+.|+|||++.+ ..++.++|||||||++|||+| |+.||+.
T Consensus 164 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 242 (434)
T 2rio_A 164 NLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242 (434)
T ss_dssp SCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred ceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence 48999999999987543321 234679999999999875 568999999999999999999 9999864
No 291
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=6.9e-33 Score=298.96 Aligned_cols=203 Identities=26% Similarity=0.414 Sum_probs=168.3
Q ss_pred HhhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeE
Q 038003 596 KATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 596 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 675 (848)
...++|++.+.||+|+||.||+|.+.. .+|+|+++.... .....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 105 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERD--NEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSC--CCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCC--CHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence 345789999999999999999998753 499999876532 2233455778999999999999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
+||||+++++|.++++.. ...+++..+..++.||+.||+|||++ ||+||||||+||+++ ++.+||+|||+++..
T Consensus 106 iv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 106 IITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp EECBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred EEeecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 999999999999999764 34688899999999999999999999 999999999999998 689999999998765
Q ss_pred CCC-----CCCcccccccccccCcccccc---------CCCCccchhhhHHHHHHHHHhCCCCCccc
Q 038003 756 GPH-----SSNWTEFAGTFGYAAPEIAYT---------MRATEKYDVYSFGVLVFEVIKGNHPRDFF 808 (848)
Q Consensus 756 ~~~-----~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~DiwSlG~il~elltg~~P~~~~ 808 (848)
... ........|++.|+|||++.+ ..++.++||||||+++|||+||+.||...
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 246 (319)
T 2y4i_B 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ 246 (319)
T ss_dssp --------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC
T ss_pred ccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 321 122234568999999999874 34788999999999999999999998643
No 292
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=3.2e-32 Score=293.54 Aligned_cols=201 Identities=22% Similarity=0.318 Sum_probs=151.8
Q ss_pred hcCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEE
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 676 (848)
.++|++.+.||+|+||.||+|.+. +++.||||++..... .....+.+..+..+++.++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN--KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence 467999999999999999999765 789999999876531 11223334455567888899999999999999999999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHH-DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
||||+ ++.+..+.... ...+++..+..++.||+.||.|||+ . ||+||||||+||+++.++.+||+|||++...
T Consensus 102 v~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp EECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EEecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 99999 55665555322 2468899999999999999999998 6 8999999999999999999999999999876
Q ss_pred CCCCCCcccccccccccCccccc-----cCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 756 GPHSSNWTEFAGTFGYAAPEIAY-----TMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 756 ~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
.... ......|++.|+|||++. +..+++++|||||||++|||+||+.||..
T Consensus 176 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (318)
T 2dyl_A 176 VDDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCC
Confidence 5432 234457899999999984 45678899999999999999999999865
No 293
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=2.2e-32 Score=306.17 Aligned_cols=198 Identities=25% Similarity=0.352 Sum_probs=159.2
Q ss_pred hhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~ 675 (848)
...+|+..+.||+|+||+||.....+++.||||++..... +.+.+|+++++.+ +|||||++++++.+....|
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~ 94 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQY 94 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEE
Confidence 3457899999999999997766666899999999865432 1245799999999 8999999999999999999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC-----CCCEEEeecc
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS-----NFEAHVSDFG 750 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~-----~~~~kl~DfG 750 (848)
+||||+.+ +|.+++.... .......+..++.||+.||+|||++ +|+||||||+||+++. ...+||+|||
T Consensus 95 lv~E~~~g-~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG 168 (432)
T 3p23_A 95 IAIELCAA-TLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFG 168 (432)
T ss_dssp EEEECCSE-EHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTT
T ss_pred EEEECCCC-CHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEeccc
Confidence 99999975 9999987552 2233445678999999999999999 9999999999999953 3368899999
Q ss_pred CccccCCCC---CCcccccccccccCccccc---cCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 751 IAKFVGPHS---SNWTEFAGTFGYAAPEIAY---TMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~---~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
+++...... ......+||+.|+|||++. +..++.++|||||||++|||+| |..||+.
T Consensus 169 ~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~ 232 (432)
T 3p23_A 169 LCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK 232 (432)
T ss_dssp EEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred ceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence 998775432 2234567999999999987 4567889999999999999999 9999854
No 294
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.97 E-value=2.5e-32 Score=320.98 Aligned_cols=202 Identities=26% Similarity=0.380 Sum_probs=170.3
Q ss_pred hhcCCcccceeccCCceeEEEEEcC----CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCC
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELP----SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGP 672 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~ 672 (848)
..++|++.+.||+|+||.||+|.+. .+..||||+++... .....+.+.+|+.++++++||||+++++++.+ +
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~ 463 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 463 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-C
Confidence 4567999999999999999999764 24579999986542 33455778999999999999999999999854 5
Q ss_pred eeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCc
Q 038003 673 HSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIA 752 (848)
Q Consensus 673 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~ 752 (848)
..++||||+++|+|.++++.. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 464 ~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 464 PVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp SCEEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred ceEEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCC
Confidence 689999999999999999754 24588999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC-cccccccccccCccccccCCCCccchhhhHHHHHHHHHh-CCCCCcc
Q 038003 753 KFVGPHSSN-WTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDF 807 (848)
Q Consensus 753 ~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~P~~~ 807 (848)
+........ .....+++.|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 595 (656)
T 2j0j_A 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595 (656)
T ss_dssp CSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred eecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 877543221 223456789999999998899999999999999999997 9999864
No 295
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=2.7e-33 Score=304.33 Aligned_cols=196 Identities=16% Similarity=0.175 Sum_probs=162.1
Q ss_pred hhcCCcccceeccCCceeEEEEEcCCCCEEEEEEccccccc----CCchhHHHHHHHHHHHhcCC---------CCcccc
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLS----GNMADHDEFLNEVLALKEIR---------HRNNVK 663 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~~E~~~l~~l~---------hp~iv~ 663 (848)
..++|++.+.||+|+||+||+|.+ +++.||||++...... ......+.+.+|+++++.++ ||||++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 346799999999999999999987 6899999999876422 12334577889999988885 555555
Q ss_pred eEEE-----------------eec-------------CCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHH
Q 038003 664 FHGF-----------------CYN-------------GPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVAN 713 (848)
Q Consensus 664 l~~~-----------------~~~-------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~ 713 (848)
+.++ +.+ .+..|+||||+++|++.+.+.. ..+++..+..++.||+.
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHH
Confidence 5554 443 6789999999999976666533 45789999999999999
Q ss_pred HHHHHh-hCCCCCeEEcCCCCCCeeeCCCC--------------------CEEEeeccCccccCCCCCCccccccccccc
Q 038003 714 ALSYLH-HDCLPSIIHRDISSKNVLLDSNF--------------------EAHVSDFGIAKFVGPHSSNWTEFAGTFGYA 772 (848)
Q Consensus 714 ~L~~LH-~~~~~~ivH~Dlk~~NIll~~~~--------------------~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~ 772 (848)
||+||| ++ +|+||||||+|||++.++ .+||+|||+|+.... ...+||+.|+
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-----~~~~gt~~y~ 244 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-----GIVVFCDVSM 244 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-----TEEECCCCTT
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-----CcEEEeeccc
Confidence 999999 89 999999999999999887 899999999987753 2347999999
Q ss_pred CccccccCCCCccchhhhHHHH-HHHHHhCCCCCc
Q 038003 773 APEIAYTMRATEKYDVYSFGVL-VFEVIKGNHPRD 806 (848)
Q Consensus 773 aPE~~~~~~~~~~~DiwSlG~i-l~elltg~~P~~ 806 (848)
|||++.+.. +.++||||+|++ .+++++|..||.
T Consensus 245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 245 DEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp CSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred ChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 999998766 889999998777 888999999975
No 296
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=4.2e-35 Score=344.56 Aligned_cols=430 Identities=17% Similarity=0.112 Sum_probs=257.7
Q ss_pred CCccCceEEcCCCCceEEEeccccCccccccCCccCCCCCCcEEeccCCcc---ccccccccc------------CCCCC
Q 038003 41 PCSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLF---FGNIPLQIG------------NLSKL 105 (848)
Q Consensus 41 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~---~~~~p~~~~------------~l~~L 105 (848)
|++|.++.+.. .+.+.+ ... . +..++..+..+++|++|+|+++.. .+.+|..++ .+++|
T Consensus 41 ck~W~~~~~~~--~~~l~~--~~~-~-~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L 114 (592)
T 3ogk_B 41 CRRWFKIDSET--REHVTM--ALC-Y-TATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQL 114 (592)
T ss_dssp CHHHHHHHHHH--CCEEEE--SCG-G-GSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred hHHHHHhhhcc--ccEEEE--eec-c-ccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCC
Confidence 44799996542 222222 211 1 122333466789999999988543 245555444 78999
Q ss_pred cEEEccccCCCCCCchhhhcc--ccccEEEecccC-cCC-CCCccccCcCCccEEEcCCCcCCCC----CCCcccCcccc
Q 038003 106 QYLDLGSNQLSGLIPPEIGKL--NQLRRLYLDMNQ-LHG-TIPPEIGQLSLIDKLALCHNNLHGS----IPSSLGNLSNL 177 (848)
Q Consensus 106 ~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~L~~n~-l~~-~~p~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L 177 (848)
++|+|++|.+++..+..++.+ .+|++|+|++|. ++. .++..+..+++|++|+|++|.+++. ++..+.++++|
T Consensus 115 ~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L 194 (592)
T 3ogk_B 115 KSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSL 194 (592)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCC
T ss_pred CeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCc
Confidence 999999999988777778774 459999999887 221 1233344788999999999998765 33445678899
Q ss_pred ceEEeecccccC----CCcccccccccccccccccccccccCcccccCCcccceeeccccCCC---CCCCCcccCccccc
Q 038003 178 AVLYLYKNSLSG----SIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLS---GSIPPILGNLKSLS 250 (848)
Q Consensus 178 ~~L~l~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~---~~~p~~l~~l~~L~ 250 (848)
++|++++|.+++ .++..+.++++|++|+|++|.+.+ +|..+..+++|++|+++.+... +..+..+..+++|+
T Consensus 195 ~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~ 273 (592)
T 3ogk_B 195 EVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLC 273 (592)
T ss_dssp CEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCC
T ss_pred cEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhcccccc
Confidence 999999999873 345556778999999999999885 7788889999999999864333 23445677788888
Q ss_pred ccccccccccCcCCCcccCCCCCceEEccCccccccCc-ccccCCCCCccccccccccccccCCccceeeccccCCCCcc
Q 038003 251 ALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVP-EEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKM 329 (848)
Q Consensus 251 ~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~ 329 (848)
.|+++++.. +.+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++ +.+.....
T Consensus 274 ~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l----------------- 334 (592)
T 3ogk_B 274 RLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGL----------------- 334 (592)
T ss_dssp EEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHH-----------------
T ss_pred ccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHH-----------------
Confidence 888887643 3566777778888888888888764433 345777888888887 33332100
Q ss_pred ccccCCCCCccEEEccC-----------CccccccCcc-ccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCcc
Q 038003 330 YEAFGDHPNLTFLDLSN-----------NNFCGEISFN-WGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHI 397 (848)
Q Consensus 330 ~~~~~~l~~L~~L~Ls~-----------N~l~~~~~~~-~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l 397 (848)
...+..+++|++|++++ |.+++..... ...+++ |++|+++.|.+
T Consensus 335 ~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------------------------L~~L~l~~~~l 390 (592)
T 3ogk_B 335 EVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQE------------------------LEYMAVYVSDI 390 (592)
T ss_dssp HHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTT------------------------CSEEEEEESCC
T ss_pred HHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCcc------------------------CeEEEeecCCc
Confidence 01123456777777773 4444332111 122444 44444444444
Q ss_pred CCCCcccccc-cccccEEEcc----CCcCCCC-----CCcccCCCCccCeEeccCc--ccCCCCCCcccC-ccccceecc
Q 038003 398 VGKIPVQLEM-LSSLNKLILN----LNQLSGG-----VPLEFGSLTKLQYLDLSTN--KLSSSIPKSIGN-LLKLHYLNL 464 (848)
Q Consensus 398 ~~~~~~~l~~-l~~L~~L~L~----~N~l~~~-----~~~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~L 464 (848)
++..+..+.. +++|+.|+++ .|.+++. ++..+..+++|+.|++++| .+++..+..+.. +++|++|+|
T Consensus 391 ~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L 470 (592)
T 3ogk_B 391 TNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLL 470 (592)
T ss_dssp CHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEE
T ss_pred cHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeec
Confidence 4433333332 4445555553 3444432 1122333455555555432 233333323322 455555555
Q ss_pred ccCcCCCC-ChhHHhhhcccceecccCcccCcC-CCccccCCCCCccccCCCCcccCC
Q 038003 465 SNNQLSHK-IPTEFEKLIHLSELDLSHNILQEE-IPPQVCNMGSLEKLNLSHNNLSDF 520 (848)
Q Consensus 465 s~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~ 520 (848)
++|++++. ++..+..+++|++|+|++|.+++. ++..+..+++|++|+|++|+++..
T Consensus 471 ~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 471 GYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp CSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred cCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 55555432 223334455555555555555433 222233455555555555555543
No 297
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1e-31 Score=319.15 Aligned_cols=193 Identities=26% Similarity=0.375 Sum_probs=166.4
Q ss_pred hcCCcccceeccCCceeEEEEEcC--CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCe--
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAELP--SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPH-- 673 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~-- 673 (848)
.++|++.+.||+|+||.||+|.+. +++.||||++.... .....+.+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 155 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG---DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG 155 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC---CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence 368999999999999999999764 68999999986542 33456678899999999999999999999987655
Q ss_pred ---eEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 674 ---SFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 674 ---~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
.|+||||++|++|.+++.. .+++.++..|+.||+.||.|||++ |||||||||+||+++.+ .+||+|||
T Consensus 156 ~~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 156 DPVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp CEEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCT
T ss_pred CceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecc
Confidence 6999999999999887643 589999999999999999999999 99999999999999875 89999999
Q ss_pred CccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 751 IAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 751 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
+++..... ....||+.|+|||++.+. ++.++|||||||++|+|++|..||..
T Consensus 227 ~a~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~ 278 (681)
T 2pzi_A 227 AVSRINSF----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNG 278 (681)
T ss_dssp TCEETTCC----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred cchhcccC----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcc
Confidence 99876543 445799999999998765 48899999999999999999988653
No 298
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.6e-31 Score=292.42 Aligned_cols=281 Identities=19% Similarity=0.207 Sum_probs=222.6
Q ss_pred CCCCCccCceEEcCCCCceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCC
Q 038003 38 KISPCSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSG 117 (848)
Q Consensus 38 ~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~ 117 (848)
...+|.|.|+ |+-...+++ .+|. .-.++|++|++++|.+++..+..|+++++|++|+|++|++++
T Consensus 26 ~~~~C~~~~~-c~~~~~~l~-----------~iP~---~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 90 (353)
T 2z80_A 26 ASLSCDRNGI-CKGSSGSLN-----------SIPS---GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT 90 (353)
T ss_dssp -CCEECTTSE-EECCSTTCS-----------SCCT---TCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCE
T ss_pred cCCCCCCCeE-eeCCCCCcc-----------cccc---cccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCc
Confidence 4567999998 875433332 2232 223589999999999997666689999999999999999998
Q ss_pred CCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCC--cccCccccceEEeecc-cccCCCccc
Q 038003 118 LIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPS--SLGNLSNLAVLYLYKN-SLSGSIPSI 194 (848)
Q Consensus 118 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~--~l~~l~~L~~L~l~~N-~l~~~~p~~ 194 (848)
..|..|+++++|++|+|++|++++..+..++.+++|++|+|++|+++ .+|. .++++++|++|++++| .+++..|..
T Consensus 91 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 169 (353)
T 2z80_A 91 IEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKD 169 (353)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTT
T ss_pred cCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHH
Confidence 88889999999999999999999655556999999999999999999 4555 7899999999999999 577666788
Q ss_pred ccccccccccccccccccccCcccccCCcccceeeccccCCCCCCCC-cccCcccccccccccccccCcCCCccc---CC
Q 038003 195 IGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPP-ILGNLKSLSALGLHINQLNGFIPPSIG---NL 270 (848)
Q Consensus 195 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~-~l~~l~~L~~L~l~~N~l~~~~p~~l~---~l 270 (848)
|+++++|++|++++|++++..|..+..+++|++|++++|+++. +|. .+..+++|+.|++++|++++..+..+. ..
T Consensus 170 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~-~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~ 248 (353)
T 2z80_A 170 FAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL-LLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETN 248 (353)
T ss_dssp TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTT-HHHHHHHHTTTEEEEEEESCBCTTCCCC------CC
T ss_pred ccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcccc-chhhhhhhcccccEEECCCCcccccccccccccccc
Confidence 9999999999999999998889999999999999999999974 444 445688999999999999876655443 35
Q ss_pred CCCceEEccCccccc----cCcccccCCCCCccccccccccccccCCccceeeccccCCCCccccccCCCCCccEEEccC
Q 038003 271 SSLRVLYLYNNGLYG----FVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSN 346 (848)
Q Consensus 271 ~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 346 (848)
+.++.++++++.+.+ .+|+.+..+++|+.|++++|+++. +|. ..|..+++|++|++++
T Consensus 249 ~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~-i~~-----------------~~~~~l~~L~~L~L~~ 310 (353)
T 2z80_A 249 SLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS-VPD-----------------GIFDRLTSLQKIWLHT 310 (353)
T ss_dssp CCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCC-CCT-----------------TTTTTCTTCCEEECCS
T ss_pred chhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCc-cCH-----------------HHHhcCCCCCEEEeeC
Confidence 667788888887764 356667777778877777777763 232 2355677788888888
Q ss_pred Ccccccc
Q 038003 347 NNFCGEI 353 (848)
Q Consensus 347 N~l~~~~ 353 (848)
|++.+..
T Consensus 311 N~~~~~~ 317 (353)
T 2z80_A 311 NPWDCSC 317 (353)
T ss_dssp SCBCCCH
T ss_pred CCccCcC
Confidence 8777543
No 299
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.97 E-value=1e-30 Score=276.53 Aligned_cols=175 Identities=14% Similarity=0.098 Sum_probs=152.5
Q ss_pred cCCcccceeccCCceeEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
++|++.+.||+|+||.||+|.+. +++.||||++...... .....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVL-PDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECccccc-CHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 57999999999999999999765 5899999999775432 234557789999999999999999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||++|++|.++++.. ....++.+|+.|++.||+|||++ ||+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 9999999999999543 34567889999999999999999 99999999999999999999998543
Q ss_pred CCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcccc
Q 038003 758 HSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFS 809 (848)
Q Consensus 758 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~ 809 (848)
|++ .++.++|||||||++|||+||+.||....
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~ 206 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAG 206 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCS
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 333 26789999999999999999999986533
No 300
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.97 E-value=2.4e-30 Score=276.16 Aligned_cols=213 Identities=23% Similarity=0.287 Sum_probs=167.6
Q ss_pred cCCccc-ceeccCCceeEEEEEc-CCCCEEEEEEcccccccCCchhHHHHHHHHHHH-hcCCCCcccceEEEeec----C
Q 038003 599 DDFDEK-FCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADHDEFLNEVLAL-KEIRHRNNVKFHGFCYN----G 671 (848)
Q Consensus 599 ~~~~~~-~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l-~~l~hp~iv~l~~~~~~----~ 671 (848)
++|.+. +.||+|+||.||+|.. .+++.||+|+++.. ..+.+|++++ +..+||||+++++++.. .
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc---------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 557776 7899999999999965 57899999998532 3466788887 66699999999999876 6
Q ss_pred CeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC---CCCEEEee
Q 038003 672 PHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS---NFEAHVSD 748 (848)
Q Consensus 672 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~D 748 (848)
...++||||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred ceEEEEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEec
Confidence 6789999999999999999764 234689999999999999999999999 9999999999999998 78999999
Q ss_pred ccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCccccccc----------------
Q 038003 749 FGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINF---------------- 812 (848)
Q Consensus 749 fG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~~~~~~---------------- 812 (848)
||++..... ..++.++|||||||++|||+||+.||.......
T Consensus 164 fg~a~~~~~----------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 221 (299)
T 3m2w_A 164 FGFAKETTG----------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 221 (299)
T ss_dssp CTTCEECTT----------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSS
T ss_pred ccccccccc----------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccC
Confidence 999875431 346778999999999999999999985432110
Q ss_pred -----cccchhhhhhhhhcCCCCCCCCCCcccccceeec
Q 038003 813 -----SSFSNMIIDVNKILDPRLPTPSPSVMDYGGCHFM 846 (848)
Q Consensus 813 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (848)
..+...+.++...+-..-|..+|.+.+...+.|+
T Consensus 222 ~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~ 260 (299)
T 3m2w_A 222 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260 (299)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred CchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhh
Confidence 1233344444444445556667776666555554
No 301
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=6.5e-31 Score=293.27 Aligned_cols=202 Identities=17% Similarity=0.209 Sum_probs=155.4
Q ss_pred hcCCcccceeccCCceeEEEEE-cCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCC-Ccccc------------
Q 038003 598 TDDFDEKFCIGKGGQGSVYKAE-LPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH-RNNVK------------ 663 (848)
Q Consensus 598 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~------------ 663 (848)
.+.|...+.||+|+||+||+|. ..+|+.||||++...... .....+.+.+|+.+++.++| ++...
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCc-cHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 4557888999999999999997 458999999998744322 22345778999999999977 32211
Q ss_pred ---------eEEEeec-----CCeeEEEEeccCCCCHHhHhcC----CCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCC
Q 038003 664 ---------FHGFCYN-----GPHSFLVCEYLDRGSLARILGD----DVTAKELGWNRRINVIKGVANALSYLHHDCLPS 725 (848)
Q Consensus 664 ---------l~~~~~~-----~~~~~lV~e~~~~gsL~~~l~~----~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ 725 (848)
+..++.. ....+++|+++ +++|.++++. ......+++..+..++.||++||+|||++ +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 1111111 12456777766 5699888741 11235678889999999999999999999 9
Q ss_pred eEEcCCCCCCeeeCCCCCEEEeeccCccccCCCCCCcccccccccccCcccc----------ccCCCCccchhhhHHHHH
Q 038003 726 IIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIA----------YTMRATEKYDVYSFGVLV 795 (848)
Q Consensus 726 ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~~DiwSlG~il 795 (848)
|+||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++ .+..++.++|||||||++
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 999999999999999999999999999876443 345677 999999998 555688899999999999
Q ss_pred HHHHhCCCCCccc
Q 038003 796 FEVIKGNHPRDFF 808 (848)
Q Consensus 796 ~elltg~~P~~~~ 808 (848)
|||+||+.||...
T Consensus 308 ~elltg~~Pf~~~ 320 (413)
T 3dzo_A 308 YWIWCADLPNTDD 320 (413)
T ss_dssp HHHHHSSCCCCTT
T ss_pred HHHHHCCCCCCCc
Confidence 9999999998653
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2.7e-30 Score=276.83 Aligned_cols=252 Identities=25% Similarity=0.243 Sum_probs=221.9
Q ss_pred CccCceEEcCCCCceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCC--CC
Q 038003 42 CSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSG--LI 119 (848)
Q Consensus 42 c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~--~~ 119 (848)
|.|.+|.|+..+ ++ .+|. .-.++|++|+|++|.++...+..|+++++|++|+|++|+++. ..
T Consensus 7 C~~~~l~c~~~~--l~-----------~ip~---~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 70 (306)
T 2z66_A 7 CSGTEIRCNSKG--LT-----------SVPT---GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCC 70 (306)
T ss_dssp EETTEEECCSSC--CS-----------SCCS---CCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEE
T ss_pred eCCCEEEcCCCC--cc-----------cCCC---CCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCc
Confidence 799999997532 21 1221 223689999999999985444458999999999999999984 34
Q ss_pred chhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCC-CcccCccccceEEeecccccCCCccccccc
Q 038003 120 PPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIP-SSLGNLSNLAVLYLYKNSLSGSIPSIIGKL 198 (848)
Q Consensus 120 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l 198 (848)
|..+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+.++++|++|++++|.+++..|..++.+
T Consensus 71 ~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 149 (306)
T 2z66_A 71 SQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 149 (306)
T ss_dssp EHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTC
T ss_pred ccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccC
Confidence 788889999999999999998 578889999999999999999996554 579999999999999999998889999999
Q ss_pred ccccccccccccccc-cCcccccCCcccceeeccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEE
Q 038003 199 KSLLQLDLSENQFSG-SIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLY 277 (848)
Q Consensus 199 ~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~ 277 (848)
++|++|+|++|.+++ .+|..+..+++|++|++++|++++..|..+..+++|++|++++|++++..+..+..+++|++|+
T Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 229 (306)
T 2z66_A 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 229 (306)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEE
T ss_pred cCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeE
Confidence 999999999999987 6888999999999999999999988889999999999999999999988887899999999999
Q ss_pred ccCccccccCcccccCC-CCCccccccccccccc
Q 038003 278 LYNNGLYGFVPEEIGYL-KSLSELELCTNLLRGV 310 (848)
Q Consensus 278 Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~ 310 (848)
+++|++.+..|..+..+ ++|++|++++|.+.+.
T Consensus 230 L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 230 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred CCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 99999999999999998 4999999999999865
No 303
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=2.1e-33 Score=330.07 Aligned_cols=406 Identities=13% Similarity=0.045 Sum_probs=236.1
Q ss_pred ccccccCCCCCcEEEccccCC---CCCCchhhh------------ccccccEEEecccCcCCCCCccccCc--CCccEEE
Q 038003 95 IPLQIGNLSKLQYLDLGSNQL---SGLIPPEIG------------KLNQLRRLYLDMNQLHGTIPPEIGQL--SLIDKLA 157 (848)
Q Consensus 95 ~p~~~~~l~~L~~L~Ls~n~l---~~~~p~~~~------------~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~ 157 (848)
.+..+.++++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..++.. .+|++|+
T Consensus 65 ~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~ 144 (592)
T 3ogk_B 65 PDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLK 144 (592)
T ss_dssp HHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEE
T ss_pred hHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEE
Confidence 344456667777777766421 123332222 55666666666666554444444442 2356666
Q ss_pred cCCCc-CCC-CCCCcccCccccceEEeecccccCC----Cccccccccccccccccccccc----ccCcccccCCcccce
Q 038003 158 LCHNN-LHG-SIPSSLGNLSNLAVLYLYKNSLSGS----IPSIIGKLKSLLQLDLSENQFS----GSIPLSLGNLSSLTM 227 (848)
Q Consensus 158 L~~n~-l~~-~~p~~l~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~----~~~p~~l~~l~~L~~ 227 (848)
|++|. ++. .++....++++|++|+|++|.+++. ++..+..+++|++|+|++|.++ +.++..+.++++|+.
T Consensus 145 L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~ 224 (592)
T 3ogk_B 145 LDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVS 224 (592)
T ss_dssp EESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCE
T ss_pred CcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcE
Confidence 65554 110 0111222445555555555555433 2223334455555555555554 222333334455555
Q ss_pred eeccccCCCCCCCCcccCccccccccccccccc---CcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccc
Q 038003 228 MSLFNNSLSGSIPPILGNLKSLSALGLHINQLN---GFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCT 304 (848)
Q Consensus 228 L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~---~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 304 (848)
|++++|.+.+ +|..+..+++|+.|+++.+... +..+..+..+++|+.|+++++.. +.+|..+.
T Consensus 225 L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~------------ 290 (592)
T 3ogk_B 225 VKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFP------------ 290 (592)
T ss_dssp EECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGG------------
T ss_pred EeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHh------------
Confidence 5555555442 3344444444554444432111 11222333344444444443321 12233333
Q ss_pred cccccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccC-ccccCcccccEeecccccccCCCCCCCCC
Q 038003 305 NLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEIS-FNWGNFSKLSTFIVSMNNISGSIPPDIGN 383 (848)
Q Consensus 305 N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~i~~~~p~~l~~ 383 (848)
.+++|++|+|++|.+++... ..+..+++|+.|+++++...+.++..+..
T Consensus 291 ------------------------------~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~ 340 (592)
T 3ogk_B 291 ------------------------------FAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQY 340 (592)
T ss_dssp ------------------------------GGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHH
T ss_pred ------------------------------hcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHh
Confidence 34455555555555543322 22345556666666522211122222345
Q ss_pred CCCccEEEcc-----------CCccCCCC-cccccccccccEEEccCCcCCCCCCcccCC-CCccCeEecc----CcccC
Q 038003 384 SPKLQVLDLS-----------SNHIVGKI-PVQLEMLSSLNKLILNLNQLSGGVPLEFGS-LTKLQYLDLS----TNKLS 446 (848)
Q Consensus 384 l~~L~~L~Ls-----------~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~Ls----~N~l~ 446 (848)
+++|++|+++ .|.+++.. +.....+++|++|+++.|++++..+..++. +++|+.|+++ .|+++
T Consensus 341 ~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~ 420 (592)
T 3ogk_B 341 CKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERIT 420 (592)
T ss_dssp CTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCS
T ss_pred CCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCcccc
Confidence 6788899998 35666432 233456899999999999999776666665 8899999996 77888
Q ss_pred CC-----CCCcccCccccceeccccC--cCCCCChhHHhh-hcccceecccCcccCcC-CCccccCCCCCccccCCCCcc
Q 038003 447 SS-----IPKSIGNLLKLHYLNLSNN--QLSHKIPTEFEK-LIHLSELDLSHNILQEE-IPPQVCNMGSLEKLNLSHNNL 517 (848)
Q Consensus 447 ~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l 517 (848)
+. ++..+.++++|++|+|+.| .+++..+..+.. +++|+.|+|++|++++. ++..+..+++|++|+|++|.+
T Consensus 421 ~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l 500 (592)
T 3ogk_B 421 DLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCF 500 (592)
T ss_dssp SCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCC
T ss_pred CchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCC
Confidence 64 3344677999999999854 477766666655 88999999999999873 445567899999999999998
Q ss_pred cCCC-cchhccccCceeecCCCCccCCC
Q 038003 518 SDFI-PRCFEEMRSLSCIDISYNELHGP 544 (848)
Q Consensus 518 ~~~~-~~~~~~l~~L~~l~ls~N~l~~~ 544 (848)
++.. +..+..+++|+.|++++|+++..
T Consensus 501 ~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 501 SERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp BHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred cHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 7653 44456799999999999998754
No 304
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=9.7e-30 Score=274.53 Aligned_cols=228 Identities=22% Similarity=0.301 Sum_probs=214.3
Q ss_pred CCCceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccE
Q 038003 52 AGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRR 131 (848)
Q Consensus 52 ~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 131 (848)
...+|+.|+|+++++. .+|+ .+..+++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++++++|++
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~-~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~ 154 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPD-QAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRE 154 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCS-CGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCE
T ss_pred cccceeEEEccCCCch-hcCh-hhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCE
Confidence 3468999999999988 6765 4788999999999999999 89999999999999999999999 78999999999999
Q ss_pred EEecccCcCCCCCccccC---------cCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCccccccccccc
Q 038003 132 LYLDMNQLHGTIPPEIGQ---------LSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLL 202 (848)
Q Consensus 132 L~L~~n~l~~~~p~~~~~---------l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 202 (848)
|+|++|++.+.+|..++. +++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|..++.+++|+
T Consensus 155 L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~ 232 (328)
T 4fcg_A 155 LSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLE 232 (328)
T ss_dssp EEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCC
T ss_pred EECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCC
Confidence 999999999999998765 999999999999999 899999999999999999999995 677899999999
Q ss_pred ccccccccccccCcccccCCcccceeeccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCcc
Q 038003 203 QLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNG 282 (848)
Q Consensus 203 ~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 282 (848)
+|+|++|.+.+.+|..++.+++|+.|++++|.+.+.+|..+..+++|++|+|++|++.+.+|..++++++|+.+++..+.
T Consensus 233 ~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 233 ELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp EEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred EEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ccc
Q 038003 283 LYG 285 (848)
Q Consensus 283 l~~ 285 (848)
+..
T Consensus 313 ~~~ 315 (328)
T 4fcg_A 313 QAQ 315 (328)
T ss_dssp SCC
T ss_pred HHH
Confidence 653
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.5e-29 Score=271.06 Aligned_cols=263 Identities=22% Similarity=0.229 Sum_probs=142.6
Q ss_pred ccceEEeecccccCCCcccccccccccccccccccccc--cCcccccCCcccceeeccccCCCCCCCCcccCcccccccc
Q 038003 176 NLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSG--SIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALG 253 (848)
Q Consensus 176 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 253 (848)
+|++|++++|+++...+..|+++++|++|+|++|+++. ..|..+..+++|++|++++|.++ .+|..+..+++|++|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEE
Confidence 44555555555543222334455555555555555441 12344444555555555555554 2444445555555555
Q ss_pred cccccccCcCC-CcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCccceeeccccCCCCccccc
Q 038003 254 LHINQLNGFIP-PSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEA 332 (848)
Q Consensus 254 l~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~ 332 (848)
+++|++++..+ ..+..+++|++|++++|.+.+..+..+..+
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-------------------------------------- 149 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL-------------------------------------- 149 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTC--------------------------------------
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccC--------------------------------------
Confidence 55555554433 345555566666666665554444433333
Q ss_pred cCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCccccccccccc
Q 038003 333 FGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLN 412 (848)
Q Consensus 333 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 412 (848)
++|++|++++|.+++. ..|..+..+++|++|+|++|++++..|..+..+++|+
T Consensus 150 ----~~L~~L~l~~n~l~~~-----------------------~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 202 (306)
T 2z66_A 150 ----SSLEVLKMAGNSFQEN-----------------------FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 202 (306)
T ss_dssp ----TTCCEEECTTCEEGGG-----------------------EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ----cCCCEEECCCCccccc-----------------------cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCC
Confidence 3444444444443320 1234444555555555555555555555555666666
Q ss_pred EEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCcc-ccceeccccCcCCCCCh--hHHhhhcccceeccc
Q 038003 413 KLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLL-KLHYLNLSNNQLSHKIP--TEFEKLIHLSELDLS 489 (848)
Q Consensus 413 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls 489 (848)
.|+|++|++++..+..|..+++|++|++++|++++..|..+..++ +|++|+|++|.+++..+ .....+...+.+.+.
T Consensus 203 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~ 282 (306)
T 2z66_A 203 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVE 282 (306)
T ss_dssp EEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSC
T ss_pred EEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhcc
Confidence 666666666655555666677777777777777777777777763 77777777777765422 122334445556666
Q ss_pred CcccCcCCCccccCC
Q 038003 490 HNILQEEIPPQVCNM 504 (848)
Q Consensus 490 ~N~l~~~~p~~~~~l 504 (848)
.+.+....|..+.+.
T Consensus 283 ~~~~~C~~p~~~~g~ 297 (306)
T 2z66_A 283 VERMECATPSDKQGM 297 (306)
T ss_dssp GGGCBEEESGGGTTC
T ss_pred ccccccCCchhhCCc
Confidence 666666666665543
No 306
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=5.3e-30 Score=280.35 Aligned_cols=204 Identities=21% Similarity=0.211 Sum_probs=115.9
Q ss_pred CCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEc
Q 038003 79 PHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158 (848)
Q Consensus 79 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 158 (848)
+.....+++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 33444666666665 4565544 46666777766666555556666666666666666666555566666666666666
Q ss_pred CCCcCCCCCCCcccCccccceEEeecccccCCCc-ccccccccccccccccc-cccccCcccccCCcccceeeccccCCC
Q 038003 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIP-SIIGKLKSLLQLDLSEN-QFSGSIPLSLGNLSSLTMMSLFNNSLS 236 (848)
Q Consensus 159 ~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~l~~n~l~ 236 (848)
++|++++..+..++++++|++|++++|++++..+ ..++.+++|++|++++| .+++..|..+..+++|++|++++|+++
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC
Confidence 6666663333335666666666666666663222 25556666666666665 344444455555555555555555555
Q ss_pred CCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccc
Q 038003 237 GSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYG 285 (848)
Q Consensus 237 ~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 285 (848)
+..|..+..+++|++|++++|+++...+..+..+++|++|++++|.+++
T Consensus 188 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~ 236 (353)
T 2z80_A 188 SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDT 236 (353)
T ss_dssp EECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTT
T ss_pred ccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccc
Confidence 5555555555555555555555543322223334555555555555544
No 307
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=6.3e-32 Score=307.60 Aligned_cols=235 Identities=23% Similarity=0.255 Sum_probs=171.3
Q ss_pred ccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCccceeeccccCCC
Q 038003 247 KSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLS 326 (848)
Q Consensus 247 ~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~ 326 (848)
++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++|.+++..+
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-------------- 97 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-------------- 97 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE--------------
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC--------------
Confidence 356666666666666555666666666666666666655443 5555555555555555543211
Q ss_pred CccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCccccc
Q 038003 327 GKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLE 406 (848)
Q Consensus 327 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~ 406 (848)
.++|++|++++|.+ ++..+. .+++|+.|+|++|.+++..|..+.
T Consensus 98 ---------~~~L~~L~L~~N~l------------------------~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~ 141 (487)
T 3oja_A 98 ---------GPSIETLHAANNNI------------------------SRVSCS---RGQGKKNIYLANNKITMLRDLDEG 141 (487)
T ss_dssp ---------CTTCCEEECCSSCC------------------------CCEEEC---CCSSCEEEECCSSCCCSGGGBCGG
T ss_pred ---------CCCcCEEECcCCcC------------------------CCCCcc---ccCCCCEEECCCCCCCCCCchhhc
Confidence 13445555555544 443333 246788888888888888888888
Q ss_pred ccccccEEEccCCcCCCCCCcccC-CCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCChhHHhhhcccce
Q 038003 407 MLSSLNKLILNLNQLSGGVPLEFG-SLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSE 485 (848)
Q Consensus 407 ~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 485 (848)
.+++|+.|+|++|.+++..|..+. .+++|+.|+|++|.|++..+ +..+++|+.|+|++|+|++.+| .|..+++|+.
T Consensus 142 ~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~ 218 (487)
T 3oja_A 142 CRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTW 218 (487)
T ss_dssp GGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSE
T ss_pred CCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccE
Confidence 888888888888888887777776 68889999999999886532 3458899999999999987555 4888999999
Q ss_pred ecccCcccCcCCCccccCCCCCccccCCCCccc-CCCcchhccccCceeecCC
Q 038003 486 LDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLS-DFIPRCFEEMRSLSCIDIS 537 (848)
Q Consensus 486 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~l~ls 537 (848)
|+|++|.|++ +|..+..+++|+.|++++|++. +.+|..+..++.|+.++++
T Consensus 219 L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 219 ISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp EECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred EEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 9999999975 6778889999999999999998 5677788888888888876
No 308
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.6e-31 Score=284.07 Aligned_cols=249 Identities=24% Similarity=0.256 Sum_probs=183.3
Q ss_pred cCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCC-CCCCchhhh-------ccccccEEEecccCcCCCCCcc
Q 038003 75 FSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQL-SGLIPPEIG-------KLNQLRRLYLDMNQLHGTIPPE 146 (848)
Q Consensus 75 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l-~~~~p~~~~-------~l~~L~~L~L~~n~l~~~~p~~ 146 (848)
++..++|+.|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34456778888888888 678777655 88888888888 456777666 7888888888888888888887
Q ss_pred c--cCcCCccEEEcCCCcCCCCCCCcccCc-----cccceEEeecccccCCCccccccccccccccccccccccc--Ccc
Q 038003 147 I--GQLSLIDKLALCHNNLHGSIPSSLGNL-----SNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGS--IPL 217 (848)
Q Consensus 147 ~--~~l~~L~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~ 217 (848)
+ +.+++|++|+|++|++++. |..++.+ ++|++|++++|++++..|..|+.+++|++|+|++|++.+. +|.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 6 7888888888888888866 7777777 8888888888888877778888888888888888887765 334
Q ss_pred cc--cCCcccceeeccccCCCC--CCC-CcccCcccccccccccccccCcCC-CcccCCCCCceEEccCccccccCcccc
Q 038003 218 SL--GNLSSLTMMSLFNNSLSG--SIP-PILGNLKSLSALGLHINQLNGFIP-PSIGNLSSLRVLYLYNNGLYGFVPEEI 291 (848)
Q Consensus 218 ~l--~~l~~L~~L~l~~n~l~~--~~p-~~l~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 291 (848)
.+ ..+++|++|++++|++++ .++ ..+..+++|++|++++|++++.+| ..+..+++|++|+|++|.++ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 44 778888888888888873 122 233466778888888888777664 44556777777777777777 455555
Q ss_pred cCCCCCccccccccccccccCCccceeeccccCCCCccccccCCCCCccEEEccCCcccc
Q 038003 292 GYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCG 351 (848)
Q Consensus 292 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 351 (848)
. ++|++|++++|++++. | .+..+++|++|++++|++++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p-------------------~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-P-------------------SPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-C-------------------CTTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-h-------------------hHhhCCCCCEEeccCCCCCC
Confidence 4 5666666666666543 2 14456677777777776654
No 309
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=2.5e-29 Score=291.69 Aligned_cols=267 Identities=28% Similarity=0.352 Sum_probs=166.2
Q ss_pred CcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCC
Q 038003 81 LANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCH 160 (848)
Q Consensus 81 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 160 (848)
++.|++++|.++ .+|..+. ++|++|+|++|+++. +|. .+++|++|+|++|+++ .+|. .+++|++|+|++
T Consensus 42 l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 42 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFS 110 (622)
T ss_dssp CCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECS
T ss_pred CcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcC
Confidence 567777777776 6676665 678888888888773 554 5677888888888777 4555 567777777777
Q ss_pred CcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCCCC
Q 038003 161 NNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIP 240 (848)
Q Consensus 161 n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p 240 (848)
|++++ +|. .+++|+.|++++|++++ +|.. +++|++|+|++|++++ +|. .+++|+.|++++|.+++ +|
T Consensus 111 N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~ 177 (622)
T 3g06_A 111 NPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP 177 (622)
T ss_dssp CCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC
T ss_pred CcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc
Confidence 77773 454 45667777777777773 4543 3667777777777763 343 23456666777776663 44
Q ss_pred CcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCccceeec
Q 038003 241 PILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLL 320 (848)
Q Consensus 241 ~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L 320 (848)
..+++|+.|++++|++++ +|.. +++|+.|++++|.++. +|.. +++
T Consensus 178 ---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~------------------------ 222 (622)
T 3g06_A 178 ---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSG------------------------ 222 (622)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTT------------------------
T ss_pred ---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCC------------------------
Confidence 334566666666666654 2322 3456666666666553 2221 233
Q ss_pred cccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCC
Q 038003 321 NQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGK 400 (848)
Q Consensus 321 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 400 (848)
|+.|+|++|++++.. ..+++|+.|++++|+|+ .+|. .+++|+.|+|++|+|+ .
T Consensus 223 ------------------L~~L~Ls~N~L~~lp----~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~ 275 (622)
T 3g06_A 223 ------------------LKELIVSGNRLTSLP----VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-R 275 (622)
T ss_dssp ------------------CCEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-S
T ss_pred ------------------CCEEEccCCccCcCC----CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-c
Confidence 444444444444321 23344555555555554 3444 4567788888888887 6
Q ss_pred CcccccccccccEEEccCCcCCCCCCcccCCCC
Q 038003 401 IPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLT 433 (848)
Q Consensus 401 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 433 (848)
+|..+..+++|+.|+|++|.+++..|..+..++
T Consensus 276 lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 276 LPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 677788888888888888888776666655443
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.1e-30 Score=280.28 Aligned_cols=260 Identities=20% Similarity=0.172 Sum_probs=216.8
Q ss_pred CCCCccCceEEcCCCCceEEEeccccCccccccCCccCCCCCCcEEeccCCcc-ccccccccc-------CCCCCcEEEc
Q 038003 39 ISPCSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLF-FGNIPLQIG-------NLSKLQYLDL 110 (848)
Q Consensus 39 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~-~~~~p~~~~-------~l~~L~~L~L 110 (848)
..|+.|..+.+.....+++.+++.++.+ .+|. .+.. .|+.|+|++|.+ .+.+|..+. ++++|++|+|
T Consensus 28 ~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~-~~~~--~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L 102 (312)
T 1wwl_A 28 FNCLGAADVELYGGGRSLEYLLKRVDTE--ADLG-QFTD--IIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTL 102 (312)
T ss_dssp GGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCH-HHHH--HHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEE
T ss_pred hhhhccccEEEEccCCCceeEeeccccc--ccHH-HHHH--HHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEc
Confidence 4566666654332223466667777776 4443 2222 289999999999 567888777 8999999999
Q ss_pred cccCCCCCCchhh--hccccccEEEecccCcCCCCCccccCc-----CCccEEEcCCCcCCCCCCCcccCccccceEEee
Q 038003 111 GSNQLSGLIPPEI--GKLNQLRRLYLDMNQLHGTIPPEIGQL-----SLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLY 183 (848)
Q Consensus 111 s~n~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 183 (848)
++|++++.+|..+ +.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..++++++|++|+++
T Consensus 103 ~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 181 (312)
T 1wwl_A 103 ENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLS 181 (312)
T ss_dssp EEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECC
T ss_pred cCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECC
Confidence 9999999999887 9999999999999999977 8888888 999999999999998888999999999999999
Q ss_pred cccccCC--Ccccc--cccccccccccccccccc--cCc-ccccCCcccceeeccccCCCCCCC-CcccCcccccccccc
Q 038003 184 KNSLSGS--IPSII--GKLKSLLQLDLSENQFSG--SIP-LSLGNLSSLTMMSLFNNSLSGSIP-PILGNLKSLSALGLH 255 (848)
Q Consensus 184 ~N~l~~~--~p~~~--~~l~~L~~L~L~~N~l~~--~~p-~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~l~ 255 (848)
+|++.+. .|..+ +.+++|++|+|++|++++ .++ ..+..+++|++|++++|++++.+| ..+..+++|++|+|+
T Consensus 182 ~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls 261 (312)
T 1wwl_A 182 DNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLS 261 (312)
T ss_dssp SCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECT
T ss_pred CCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECC
Confidence 9998865 34444 899999999999999983 223 345688999999999999998775 567778999999999
Q ss_pred cccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCcccccccccccc
Q 038003 256 INQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRG 309 (848)
Q Consensus 256 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 309 (848)
+|+++ .+|..+. ++|++|+|++|++++. |. +..+++|++|++++|++++
T Consensus 262 ~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 262 FTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 99999 6777776 8999999999999976 65 8999999999999999875
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=6.5e-29 Score=263.10 Aligned_cols=237 Identities=22% Similarity=0.185 Sum_probs=179.1
Q ss_pred CCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccC-cCCCCCccccCcCCccE
Q 038003 77 SFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQ-LHGTIPPEIGQLSLIDK 155 (848)
Q Consensus 77 ~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~ 155 (848)
-.++|++|+|++|.+++..+..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|+ +++..|..+..+++|++
T Consensus 30 ~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~ 109 (285)
T 1ozn_A 30 IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHT 109 (285)
T ss_dssp CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCE
T ss_pred CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCE
Confidence 34688888888888887777778888888888888888888778888888888888888887 77666778888888888
Q ss_pred EEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCC
Q 038003 156 LALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSL 235 (848)
Q Consensus 156 L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l 235 (848)
|+|++|++++..|..+.++++|++|++++|++++..+..|+.+++|++|+|++|++++..+..+..+++|++|++++|++
T Consensus 110 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 189 (285)
T 1ozn_A 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189 (285)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcc
Confidence 88888888877777888888888888888888866666788888888888888888865556677788888888888888
Q ss_pred CCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCc
Q 038003 236 SGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHS 314 (848)
Q Consensus 236 ~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 314 (848)
++..|..+..+++|+.|++++|++++..+..+..+++|++|++++|.+....+. ......++.+....+.+....|..
T Consensus 190 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~-~~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 190 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESGG
T ss_pred cccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc-HHHHHHHHhcccccCccccCCchH
Confidence 777677777777788888888877776666677777777777777777643221 111223444445555555555544
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.9e-28 Score=277.30 Aligned_cols=229 Identities=23% Similarity=0.170 Sum_probs=211.5
Q ss_pred CCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEc
Q 038003 79 PHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158 (848)
Q Consensus 79 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 158 (848)
+++++|+|++|.+++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|+.+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 68999999999999999999999999999999999999988899999999999999999999777778999999999999
Q ss_pred CCCcCCCCCCCcccCccccceEEeecc-cccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCC
Q 038003 159 CHNNLHGSIPSSLGNLSNLAVLYLYKN-SLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSG 237 (848)
Q Consensus 159 ~~n~l~~~~p~~l~~l~~L~~L~l~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~ 237 (848)
++|++++..+..|.++++|++|++++| .+....+..|.++++|++|+|++|++++ +| .+..+++|+.|+|++|++++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcc
Confidence 999999666678999999999999995 5553344579999999999999999995 45 58899999999999999998
Q ss_pred CCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCcccccccccccc
Q 038003 238 SIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRG 309 (848)
Q Consensus 238 ~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 309 (848)
..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|+.|++++|.+..
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 889999999999999999999999999999999999999999999998888889999999999999998763
No 313
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.9e-28 Score=275.79 Aligned_cols=249 Identities=24% Similarity=0.268 Sum_probs=199.7
Q ss_pred CcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCC
Q 038003 81 LANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCH 160 (848)
Q Consensus 81 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 160 (848)
.+.++.+++.++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 456777777775 5776654 6899999999999988888899999999999999999988888899999999999999
Q ss_pred CcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccc-cccccCcccccCCcccceeeccccCCCCCC
Q 038003 161 NNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSEN-QFSGSIPLSLGNLSSLTMMSLFNNSLSGSI 239 (848)
Q Consensus 161 n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~ 239 (848)
|++++..+..|+++++|++|+|++|++++..+..|..+++|++|+|++| .+....+..|..+++|++|+|++|++++ +
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~ 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-M 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-C
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-c
Confidence 9998666667888999999999999998666678888999999999984 4543334468888888999999888884 3
Q ss_pred CCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCccceee
Q 038003 240 PPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVL 319 (848)
Q Consensus 240 p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 319 (848)
| .+..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++++..+
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~------- 283 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPH------- 283 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT-------
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccCh-------
Confidence 4 47788888888888888888888888888888888888888888778788888888888887777765433
Q ss_pred ccccCCCCccccccCCCCCccEEEccCCccccc
Q 038003 320 LNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGE 352 (848)
Q Consensus 320 L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 352 (848)
..|..+++|+.|+|++|.+...
T Consensus 284 -----------~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 284 -----------DLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp -----------TSSTTCTTCCEEECCSSCEECS
T ss_pred -----------HHhccccCCCEEEccCCCcCCC
Confidence 3355667788888888877644
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=3.2e-28 Score=274.50 Aligned_cols=228 Identities=24% Similarity=0.180 Sum_probs=211.3
Q ss_pred CCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEc
Q 038003 79 PHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158 (848)
Q Consensus 79 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 158 (848)
++++.|+|++|.+++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 68999999999999988899999999999999999999888899999999999999999999777778999999999999
Q ss_pred CCCcCCCCCCCcccCccccceEEeeccc-ccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCC
Q 038003 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNS-LSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSG 237 (848)
Q Consensus 159 ~~n~l~~~~p~~l~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~ 237 (848)
++|++++..+..|.++++|++|++++|. +....+..|.++++|++|+|++|+++ .+| .+..+++|+.|+|++|++++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCc
Confidence 9999997667789999999999999954 55344457999999999999999999 566 58899999999999999998
Q ss_pred CCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccc
Q 038003 238 SIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLR 308 (848)
Q Consensus 238 ~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 308 (848)
..|..|..+++|+.|+|++|++++..+.+|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 222 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred cChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 88999999999999999999999999999999999999999999999888888999999999999999886
No 315
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=3.8e-28 Score=273.89 Aligned_cols=246 Identities=24% Similarity=0.263 Sum_probs=207.7
Q ss_pred EeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcC
Q 038003 84 LNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNL 163 (848)
Q Consensus 84 L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l 163 (848)
++.+++.++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++
T Consensus 48 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 48 VICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp EECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred EEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 334444443 5676665 7899999999999998889999999999999999999988888999999999999999999
Q ss_pred CCCCCCcccCccccceEEeecccccCCCcccccccccccccccccc-cccccCcccccCCcccceeeccccCCCCCCCCc
Q 038003 164 HGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSEN-QFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPI 242 (848)
Q Consensus 164 ~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~ 242 (848)
++..+..|..+++|++|+|++|+++...+..|..+++|++|+|++| .++...+..|.++++|++|++++|+++ .+| .
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~ 202 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-N 202 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-C
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-c
Confidence 9666668999999999999999999777778999999999999995 455444457889999999999999998 455 4
Q ss_pred ccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCccceeeccc
Q 038003 243 LGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQ 322 (848)
Q Consensus 243 l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~ 322 (848)
+..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++++..+
T Consensus 203 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~---------- 272 (440)
T 3zyj_A 203 LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPH---------- 272 (440)
T ss_dssp CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCT----------
T ss_pred cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccCh----------
Confidence 7888999999999999998888889999999999999999998888888888888888888888775433
Q ss_pred cCCCCccccccCCCCCccEEEccCCccccc
Q 038003 323 NNLSGKMYEAFGDHPNLTFLDLSNNNFCGE 352 (848)
Q Consensus 323 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 352 (848)
..|..+++|+.|+|++|.+...
T Consensus 273 --------~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 273 --------DLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp --------TTTSSCTTCCEEECCSSCEECS
T ss_pred --------hHhccccCCCEEEcCCCCccCC
Confidence 3456678888888888887654
No 316
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.8e-28 Score=259.60 Aligned_cols=247 Identities=23% Similarity=0.268 Sum_probs=210.7
Q ss_pred EeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCc-
Q 038003 84 LNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNN- 162 (848)
Q Consensus 84 L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~- 162 (848)
++.+++.++ .+|..+ .++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|++|.
T Consensus 16 ~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~ 92 (285)
T 1ozn_A 16 TSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92 (285)
T ss_dssp EECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred EEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCC
Confidence 444555554 466544 4789999999999998877889999999999999999998889999999999999999997
Q ss_pred CCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCCCCCc
Q 038003 163 LHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPI 242 (848)
Q Consensus 163 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~ 242 (848)
++...|..+..+++|++|++++|++++..|..+..+++|++|+|++|++++..+..+..+++|++|++++|++++..+..
T Consensus 93 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 172 (285)
T 1ozn_A 93 LRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERA 172 (285)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTT
T ss_pred ccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHH
Confidence 77666888999999999999999999888889999999999999999999777777999999999999999999766667
Q ss_pred ccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCC-----ccce
Q 038003 243 LGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPH-----SIER 317 (848)
Q Consensus 243 l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-----~l~~ 317 (848)
+..+++|++|++++|++++..|..+..+++|++|++++|.+++..+..+..+++|+.|++++|.+....+. .++.
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~ 252 (285)
T 1ozn_A 173 FRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQK 252 (285)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHH
T ss_pred hcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHh
Confidence 99999999999999999999899999999999999999999988778899999999999999999865442 2444
Q ss_pred eeccccCCCCcccccc
Q 038003 318 VLLNQNNLSGKMYEAF 333 (848)
Q Consensus 318 l~L~~n~l~~~~~~~~ 333 (848)
+....+.+....+..+
T Consensus 253 ~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 253 FRGSSSEVPCSLPQRL 268 (285)
T ss_dssp CCSEECCCBEEESGGG
T ss_pred cccccCccccCCchHh
Confidence 4455555554444433
No 317
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=6.3e-30 Score=294.97 Aligned_cols=190 Identities=18% Similarity=0.124 Sum_probs=136.3
Q ss_pred eeccCCceeEEEE-EcCCCCEEEEEEcccccccCC------chhHHHHHHHHHHHhcC-CCCcccceEEEeecCCeeEEE
Q 038003 606 CIGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSGN------MADHDEFLNEVLALKEI-RHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 606 ~lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~------~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lV 677 (848)
..+.|+.|.+..+ +.-.|+.+|+|++.+...... ....+++.+|+++|+++ .|+||++++++++++...|+|
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 4667777766665 334689999999976532211 12346689999999999 799999999999999999999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||++|++|.+++++. ++++.. +|+.||+.||+|+|++ |||||||||+|||++.+|.+||+|||+|+....
T Consensus 321 MEyv~G~~L~d~i~~~---~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG---EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp EECCCSEEHHHHHHTT---CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred EecCCCCcHHHHHHhC---CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 9999999999999765 455543 5899999999999999 999999999999999999999999999998766
Q ss_pred CCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCC
Q 038003 758 HSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPR 805 (848)
Q Consensus 758 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~ 805 (848)
........+||++|||||++.+. +..++|+||+|++++++.++..|+
T Consensus 392 ~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 392 DCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccchh
Confidence 55556778999999999999864 567899999999998887766553
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.5e-27 Score=274.92 Aligned_cols=269 Identities=26% Similarity=0.386 Sum_probs=161.8
Q ss_pred CCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEe
Q 038003 103 SKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYL 182 (848)
Q Consensus 103 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l 182 (848)
.++++|++++|+++ .+|..+. ++|++|+|++|+++ .+|. .+++|++|+|++|+|+ .+|. .+++|++|++
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 45899999999998 6787765 78999999999988 5665 4677888888888877 4665 5577777777
Q ss_pred ecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCCCCCcccCcccccccccccccccCc
Q 038003 183 YKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGF 262 (848)
Q Consensus 183 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 262 (848)
++|++++ +|. .+++|++|+|++|++++ +|.. +++|++|++++|++++ +|.
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~--------------------- 158 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA--------------------- 158 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---------------------
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---------------------
Confidence 7777774 343 34566666666666652 3432 2445555555554442 221
Q ss_pred CCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCccceeeccccCCCCccccccCCCCCccEE
Q 038003 263 IPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFL 342 (848)
Q Consensus 263 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L 342 (848)
.+++|+.|++++|.+++ +| ..+++|+.|++++|.+++. |. ..++|+.|
T Consensus 159 ------~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l-~~---------------------~~~~L~~L 206 (622)
T 3g06_A 159 ------LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASL-PT---------------------LPSELYKL 206 (622)
T ss_dssp ------CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCC-CC---------------------CCTTCCEE
T ss_pred ------ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCC-CC---------------------ccchhhEE
Confidence 12345555555555543 22 2223333333333333321 10 11344555
Q ss_pred EccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCC
Q 038003 343 DLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLS 422 (848)
Q Consensus 343 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 422 (848)
++++|.++. +|.. +++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+
T Consensus 207 ~L~~N~l~~-------------------------l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~ 254 (622)
T 3g06_A 207 WAYNNRLTS-------------------------LPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT 254 (622)
T ss_dssp ECCSSCCSS-------------------------CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS
T ss_pred ECcCCcccc-------------------------cCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC
Confidence 555554442 2221 2567777777777764 33 34466777777777776
Q ss_pred CCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCChhHHhhhc
Q 038003 423 GGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLI 481 (848)
Q Consensus 423 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 481 (848)
. +|. .+++|+.|+|++|+|+ .+|..|.++++|+.|+|++|.+++.+|..+..++
T Consensus 255 ~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 255 S-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp C-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred c-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 3 343 4566777777777777 5566677777777777777777766666666554
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=2.9e-29 Score=269.87 Aligned_cols=245 Identities=22% Similarity=0.216 Sum_probs=133.9
Q ss_pred CCcccceeeccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccc
Q 038003 221 NLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSEL 300 (848)
Q Consensus 221 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 300 (848)
.+++|++|++++|++++..|..+..+++|++|+|++|++++..+ +..+++|++|++++|.+++.. ..++|+.|
T Consensus 32 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L 104 (317)
T 3o53_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETL 104 (317)
T ss_dssp TGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEE
T ss_pred cCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEE
Confidence 33444444444444444333444444444444444444443332 444555555555555554321 12444555
Q ss_pred cccccccccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCC
Q 038003 301 ELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPD 380 (848)
Q Consensus 301 ~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~ 380 (848)
++++|.+++..+ ..+++|++|++++|++++..+..+..+++|+.|++++|.+.+..+..
T Consensus 105 ~l~~n~l~~~~~---------------------~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 163 (317)
T 3o53_A 105 HAANNNISRVSC---------------------SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAE 163 (317)
T ss_dssp ECCSSCCSEEEE---------------------CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGG
T ss_pred ECCCCccCCcCc---------------------cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHH
Confidence 555444443321 12345666666666666555555555555555555555555444444
Q ss_pred CC-CCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCcccc
Q 038003 381 IG-NSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKL 459 (848)
Q Consensus 381 l~-~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 459 (848)
+. .+++|++|+|++|++++. + ....+++|++|+|++|++++ +|..|..+++|+.|+|++|+++ .+|..+..+++|
T Consensus 164 ~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L 239 (317)
T 3o53_A 164 LAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNL 239 (317)
T ss_dssp GGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTC
T ss_pred HhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCC
Confidence 42 456666666666666643 2 22236666666777666663 3334666677777777777776 456666667777
Q ss_pred ceeccccCcCC-CCChhHHhhhcccceeccc-CcccCcCC
Q 038003 460 HYLNLSNNQLS-HKIPTEFEKLIHLSELDLS-HNILQEEI 497 (848)
Q Consensus 460 ~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls-~N~l~~~~ 497 (848)
+.|+|++|.++ +.+|..+..+++|+.|+++ .+.+++..
T Consensus 240 ~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~ 279 (317)
T 3o53_A 240 EHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQN 279 (317)
T ss_dssp CEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSS
T ss_pred CEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCc
Confidence 77777777776 5566666666677777766 33444433
No 320
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.95 E-value=8.8e-32 Score=316.41 Aligned_cols=457 Identities=14% Similarity=0.118 Sum_probs=271.1
Q ss_pred CCccCceEEcCCCCceEEEeccccCccccccCCccCCCCCCcEEeccCCccccc---cc------------ccccCCCCC
Q 038003 41 PCSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGN---IP------------LQIGNLSKL 105 (848)
Q Consensus 41 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~---~p------------~~~~~l~~L 105 (848)
|++|+++... ....+++.... +..+...+..+++|++|+|+++..... .| .....+++|
T Consensus 34 ck~W~~~~~~----~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 34 CKSWYEIERW----CRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp CHHHHHHHHH----HCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHhhhh----hceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 4479988221 23344444322 222333466789999999999764322 22 123467899
Q ss_pred cEEEccccCCCCCCchhhh-ccccccEEEeccc-CcCCC-CCccccCcCCccEEEcCCCcCCCCCCCccc----Cccccc
Q 038003 106 QYLDLGSNQLSGLIPPEIG-KLNQLRRLYLDMN-QLHGT-IPPEIGQLSLIDKLALCHNNLHGSIPSSLG----NLSNLA 178 (848)
Q Consensus 106 ~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~----~l~~L~ 178 (848)
++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+..+++|++|+|++|.+++..+..+. .+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 9999999999887777776 7899999999998 55432 445556789999999999998765544443 567899
Q ss_pred eEEeeccc--ccC-CCcccccccccccccccccc-cccccCcccccCCcccceeeccccC-------CCCCCCCcccCcc
Q 038003 179 VLYLYKNS--LSG-SIPSIIGKLKSLLQLDLSEN-QFSGSIPLSLGNLSSLTMMSLFNNS-------LSGSIPPILGNLK 247 (848)
Q Consensus 179 ~L~l~~N~--l~~-~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~l~~n~-------l~~~~p~~l~~l~ 247 (848)
+|++++|. ++. .++..+..+++|++|+|++| .++ .+|..+..+++|++|+++.+. +.+ ++..+.+++
T Consensus 188 ~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~ 265 (594)
T 2p1m_B 188 SLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCK 265 (594)
T ss_dssp EEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCT
T ss_pred EEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCC
Confidence 99999887 221 11222345688999999988 444 477788888888888866543 221 233455556
Q ss_pred ccccc-ccccccccCcCCCcccCCCCCceEEccCccccccCc-ccccCCCCCccccccccccccccCCccceeeccccCC
Q 038003 248 SLSAL-GLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVP-EEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNL 325 (848)
Q Consensus 248 ~L~~L-~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l 325 (848)
+|+.| .+..... +.++..+..+++|++|++++|.+++... ..+..+++|+.|++++| +.... +
T Consensus 266 ~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~---l---------- 330 (594)
T 2p1m_B 266 ELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAG---L---------- 330 (594)
T ss_dssp TCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHH---H----------
T ss_pred CcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHH---H----------
Confidence 66655 3332222 1233333445666666666666543221 12334555555555544 22100 0
Q ss_pred CCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCC-CCCCccEEEccCCccCCCCccc
Q 038003 326 SGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIG-NSPKLQVLDLSSNHIVGKIPVQ 404 (848)
Q Consensus 326 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~~~~ 404 (848)
......+++|++|+++++.-.| ....+.+++.....+. .+++|+.|+++.|.+++.....
T Consensus 331 ----~~l~~~~~~L~~L~L~~~~~~g---------------~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~ 391 (594)
T 2p1m_B 331 ----EVLASTCKDLRELRVFPSEPFV---------------MEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALIT 391 (594)
T ss_dssp ----HHHHHHCTTCCEEEEECSCTTC---------------SSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHH
T ss_pred ----HHHHHhCCCCCEEEEecCcccc---------------cccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHH
Confidence 0011123455555553211000 0011222211111111 2567777777777776555545
Q ss_pred cc-ccccccEEEcc--C----CcCCCCC-----CcccCCCCccCeEeccCcccCCCCCCcccC-ccccceeccccCcCCC
Q 038003 405 LE-MLSSLNKLILN--L----NQLSGGV-----PLEFGSLTKLQYLDLSTNKLSSSIPKSIGN-LLKLHYLNLSNNQLSH 471 (848)
Q Consensus 405 l~-~l~~L~~L~L~--~----N~l~~~~-----~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~ 471 (848)
+. .+++|+.|+++ + |.+++.. +..+..+++|+.|++++ .+++..+..++. +++|+.|+|++|.+++
T Consensus 392 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~ 470 (594)
T 2p1m_B 392 IARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSD 470 (594)
T ss_dssp HHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSH
T ss_pred HHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcH
Confidence 54 46778888877 3 4555221 11245567888888866 666555555554 7778888888888876
Q ss_pred CChhHH-hhhcccceecccCcccCcCCCc-cccCCCCCccccCCCCcccCCCcchh-ccccCceeecCCCCc
Q 038003 472 KIPTEF-EKLIHLSELDLSHNILQEEIPP-QVCNMGSLEKLNLSHNNLSDFIPRCF-EEMRSLSCIDISYNE 540 (848)
Q Consensus 472 ~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~l~ls~N~ 540 (848)
..+..+ ..+++|++|+|++|.+++..+. ....+++|++|++++|+++......+ ..+|.|+...+..+.
T Consensus 471 ~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 471 LGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred HHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 555555 6678888888888888654433 33457888888888888754444444 456777665555543
No 321
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=2.6e-27 Score=248.44 Aligned_cols=217 Identities=28% Similarity=0.324 Sum_probs=139.2
Q ss_pred CCCCccCceEEcCCCCceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCC
Q 038003 39 ISPCSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGL 118 (848)
Q Consensus 39 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 118 (848)
.|+|.|.|+.|.-.. .+ +.++++++.++ .+|..+. ++|++|+|++|++++.
T Consensus 2 ~~~C~~~~~~C~c~~-~~-------------------------~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~ 52 (270)
T 2o6q_A 2 EALCKKDGGVCSCNN-NK-------------------------NSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSL 52 (270)
T ss_dssp CCCBGGGTCSBEEET-TT-------------------------TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCC
T ss_pred CccCCCCCCCCEeCC-CC-------------------------CEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCee
Confidence 479999999986321 22 34455555554 3554443 4566677777766655
Q ss_pred CchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCccccccc
Q 038003 119 IPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKL 198 (848)
Q Consensus 119 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l 198 (848)
.+..|+++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+.++++|++|++++|++++..+..|+.+
T Consensus 53 ~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 132 (270)
T 2o6q_A 53 PSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSL 132 (270)
T ss_dssp CTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTC
T ss_pred CHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcC
Confidence 55566666777777777776664444445666666666666666665444556666677777777777766555666666
Q ss_pred ccccccccccccccccCcccccCCcccceeeccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEc
Q 038003 199 KSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYL 278 (848)
Q Consensus 199 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L 278 (848)
++|++|+|++|++++..+..+..+++|+.|++++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|
T Consensus 133 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 212 (270)
T 2o6q_A 133 TKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQL 212 (270)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEe
Confidence 67777777777666544445666666777777777666555555666666666777666666655555666677777777
Q ss_pred cCcccc
Q 038003 279 YNNGLY 284 (848)
Q Consensus 279 s~N~l~ 284 (848)
++|.+.
T Consensus 213 ~~N~~~ 218 (270)
T 2o6q_A 213 QENPWD 218 (270)
T ss_dssp CSSCBC
T ss_pred cCCCee
Confidence 777664
No 322
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4e-29 Score=268.77 Aligned_cols=269 Identities=20% Similarity=0.179 Sum_probs=189.1
Q ss_pred CcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCC
Q 038003 81 LANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCH 160 (848)
Q Consensus 81 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 160 (848)
++.++++.+.+...++..+..+++|++|+|++|++++..|..|+++++|++|+|++|++++..| ++.+++|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 3455666666655555555666777888888887777766777778888888888887775443 77777788888888
Q ss_pred CcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCCCC
Q 038003 161 NNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIP 240 (848)
Q Consensus 161 n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p 240 (848)
|++++ +| ..++|++|++++|++++..+.. +++|++|++++|++++..|..++.+++|++|++++|.+++..+
T Consensus 90 n~l~~-l~----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 90 NYVQE-LL----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SEEEE-EE----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred Ccccc-cc----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 87773 22 2367788888888877554433 4667788888888877666677777788888888888776656
Q ss_pred Cccc-CcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCccceee
Q 038003 241 PILG-NLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVL 319 (848)
Q Consensus 241 ~~l~-~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 319 (848)
..+. .+++|++|++++|++++. +. ...+++|++|+|++|++++..+ .+..+++|+.|++++|++++. |.
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~~l-~~------ 231 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLI-EK------ 231 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEE-CT------
T ss_pred HHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCcccch-hh------
Confidence 5553 677788888888887755 22 3347788888888888876443 477788888888888877742 32
Q ss_pred ccccCCCCccccccCCCCCccEEEccCCccc-cccCccccCcccccEeecc-cccccCCCCCCC
Q 038003 320 LNQNNLSGKMYEAFGDHPNLTFLDLSNNNFC-GEISFNWGNFSKLSTFIVS-MNNISGSIPPDI 381 (848)
Q Consensus 320 L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~l~-~N~i~~~~p~~l 381 (848)
.+..+++|+.|++++|.+. +..+..+..+++|+.+++. .+.+.+..|...
T Consensus 232 ------------~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~~ 283 (317)
T 3o53_A 232 ------------ALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEEC 283 (317)
T ss_dssp ------------TCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCCC
T ss_pred ------------HhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhcc
Confidence 2456678888888888887 5566666777888888877 345565554443
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=3e-27 Score=268.95 Aligned_cols=234 Identities=23% Similarity=0.220 Sum_probs=145.2
Q ss_pred ccceeeccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCcccccc
Q 038003 224 SLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELC 303 (848)
Q Consensus 224 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 303 (848)
+|+.|+|++|.+++..|..|+.+++|++|+|++|.+++.+| +..+++|++|+|++|.+++..+ .++|+.|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 55555555555555444555555555555555555554443 5556666666666666654321 2566666666
Q ss_pred ccccccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCC-
Q 038003 304 TNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIG- 382 (848)
Q Consensus 304 ~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~- 382 (848)
+|.+++..+. .+++|+.|+|++|.+++..+..++.+++|+.|++++|.+++..|..+.
T Consensus 108 ~N~l~~~~~~---------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~ 166 (487)
T 3oja_A 108 NNNISRVSCS---------------------RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA 166 (487)
T ss_dssp SSCCCCEEEC---------------------CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGG
T ss_pred CCcCCCCCcc---------------------ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhh
Confidence 6666544321 235677777777777776666666666666666666666665566554
Q ss_pred CCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCcccccee
Q 038003 383 NSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYL 462 (848)
Q Consensus 383 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 462 (848)
.+++|++|+|++|.|++..+ +..+++|+.|+|++|.+++. |..|..+++|+.|+|++|+|++ +|..+..+++|+.|
T Consensus 167 ~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L 242 (487)
T 3oja_A 167 SSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHF 242 (487)
T ss_dssp GTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEE
T ss_pred hCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEE
Confidence 56777777777777764422 33466777777777777743 3346677777777777777773 56667777777777
Q ss_pred ccccCcCC-CCChhHHhhhcccceeccc
Q 038003 463 NLSNNQLS-HKIPTEFEKLIHLSELDLS 489 (848)
Q Consensus 463 ~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls 489 (848)
++++|.++ +.+|..+..++.|+.|+++
T Consensus 243 ~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 243 DLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp ECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred EcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 77777776 4556666666666666665
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=3.9e-26 Score=240.50 Aligned_cols=206 Identities=25% Similarity=0.260 Sum_probs=163.1
Q ss_pred CCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEc
Q 038003 79 PHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158 (848)
Q Consensus 79 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 158 (848)
++|++|+|++|.+++..+..|+++++|++|+|++|++++..+..|+++++|++|+|++|++++..|..+..+++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46889999999998777778888999999999999988777778888999999999999988777788888889999999
Q ss_pred CCCcCCCCCCCcccCccccceEEeecccccCC-CcccccccccccccccccccccccCcccccCCcccc----eeecccc
Q 038003 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGS-IPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLT----MMSLFNN 233 (848)
Q Consensus 159 ~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~l~~n 233 (848)
++|++++..+..++++++|++|++++|++++. +|..++.+++|++|+|++|++++..+..+..+++|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 99988876666788888888899888888763 578888888888888888888877777777777666 6777777
Q ss_pred CCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccc
Q 038003 234 SLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYG 285 (848)
Q Consensus 234 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 285 (848)
++++..+..+ ...+|++|++++|++++..+..+..+++|++|++++|.+.+
T Consensus 188 ~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 188 PMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred cccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 7774433333 33467777777777776665566777777777777777664
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2.3e-25 Score=234.53 Aligned_cols=210 Identities=26% Similarity=0.256 Sum_probs=189.0
Q ss_pred CCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCcccccccccccEEEc
Q 038003 337 PNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLIL 416 (848)
Q Consensus 337 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 416 (848)
++|++|++++|++++..+..+..+++|+.|++++|++.+..+..|..+++|++|+|++|++++..+..+..+++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46889999999999888878889999999999999998877788999999999999999999888889999999999999
Q ss_pred cCCcCCCCCCcccCCCCccCeEeccCcccCCC-CCCcccCccccceeccccCcCCCCChhHHhhhcccc----eecccCc
Q 038003 417 NLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSS-IPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLS----ELDLSHN 491 (848)
Q Consensus 417 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N 491 (848)
++|.+++..+..++.+++|++|++++|++++. +|..|+.+++|++|+|++|++++..+..|..+.+|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 99999988787899999999999999999874 589999999999999999999998888999888888 8999999
Q ss_pred ccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccCCCCCC
Q 038003 492 ILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPIPN 547 (848)
Q Consensus 492 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~ 547 (848)
.+++..+..+. ..+|++|+|++|++++..+..|..+++|+.+++++|++++..|.
T Consensus 188 ~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 188 PMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp CCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred cccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 99876555554 45899999999999998888889999999999999999986654
No 326
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=4.8e-29 Score=293.08 Aligned_cols=407 Identities=15% Similarity=0.148 Sum_probs=249.5
Q ss_pred CCCCCCcEEeccCCccccccccccc-CCCCCcEEEcccc-CCCCC-CchhhhccccccEEEecccCcCCCCCcccc----
Q 038003 76 SSFPHLANLNLSFNLFFGNIPLQIG-NLSKLQYLDLGSN-QLSGL-IPPEIGKLNQLRRLYLDMNQLHGTIPPEIG---- 148 (848)
Q Consensus 76 ~~l~~l~~L~l~~n~~~~~~p~~~~-~l~~L~~L~Ls~n-~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~---- 148 (848)
..+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+.
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 4688999999999999988887776 7999999999999 56543 455556899999999999999876655554
Q ss_pred CcCCccEEEcCCCc--CCCC-CCCcccCccccceEEeecc-cccCCCcccccccccccccccc-------cccccccCcc
Q 038003 149 QLSLIDKLALCHNN--LHGS-IPSSLGNLSNLAVLYLYKN-SLSGSIPSIIGKLKSLLQLDLS-------ENQFSGSIPL 217 (848)
Q Consensus 149 ~l~~L~~L~L~~n~--l~~~-~p~~l~~l~~L~~L~l~~N-~l~~~~p~~~~~l~~L~~L~L~-------~N~l~~~~p~ 217 (848)
.+++|++|++++|. ++.. ++..+.++++|++|++++| .+.+ +|..+..+++|++|+++ .|.+.+ ++.
T Consensus 182 ~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~ 259 (594)
T 2p1m_B 182 TYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSV 259 (594)
T ss_dssp TCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHH
T ss_pred cCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHH
Confidence 66799999999997 2211 1122345699999999999 5554 78888999999999954 445553 555
Q ss_pred cccCCccccee-eccccCCCCCCCCcccCcccccccccccccccCcCCC-cccCCCCCceEEccCcccccc-CcccccCC
Q 038003 218 SLGNLSSLTMM-SLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPP-SIGNLSSLRVLYLYNNGLYGF-VPEEIGYL 294 (848)
Q Consensus 218 ~l~~l~~L~~L-~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l 294 (848)
.+.++++|+.| .+.+... +.++..+..+++|++|+|++|.+++.... .+..+++|++|++++| +... ++.....+
T Consensus 260 ~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~ 337 (594)
T 2p1m_B 260 ALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTC 337 (594)
T ss_dssp HHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHC
T ss_pred HHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhC
Confidence 78899999999 4544333 24555566789999999999997654322 3568899999999998 4422 23334458
Q ss_pred CCCccccccccccccccCCccceeeccccCCCCccccccC-CCCCccEEEccCCccccccCcccc-CcccccEeecc--c
Q 038003 295 KSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFG-DHPNLTFLDLSNNNFCGEISFNWG-NFSKLSTFIVS--M 370 (848)
Q Consensus 295 ~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~l~--~ 370 (848)
++|++|+++++.-.| ....+.++......+. .+++|+.|+++.|.+++.....+. .+++|+.|+++ +
T Consensus 338 ~~L~~L~L~~~~~~g---------~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~ 408 (594)
T 2p1m_B 338 KDLRELRVFPSEPFV---------MEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIE 408 (594)
T ss_dssp TTCCEEEEECSCTTC---------SSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESS
T ss_pred CCCCEEEEecCcccc---------cccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeeccc
Confidence 899999885432110 0011222222222222 367888888888887765444443 35566666665 2
Q ss_pred ----ccccCCCCCCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCC-CCccCeEeccCccc
Q 038003 371 ----NNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGS-LTKLQYLDLSTNKL 445 (848)
Q Consensus 371 ----N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l 445 (848)
|.+++. |.. ..++..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+
T Consensus 409 ~~~~~~l~~~-~~~------------------~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i 468 (594)
T 2p1m_B 409 PKAPDYLTLE-PLD------------------IGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGD 468 (594)
T ss_dssp TTCCCTTTCC-CTH------------------HHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCS
T ss_pred CCCcccccCC-chh------------------hHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCC
Confidence 222211 000 00111133444555555544 333322223332 45555555555555
Q ss_pred CCCCCCcc-cCccccceeccccCcCCCCChh-HHhhhcccceecccCcccCcCCCccc-cCCCCCccccCCCC
Q 038003 446 SSSIPKSI-GNLLKLHYLNLSNNQLSHKIPT-EFEKLIHLSELDLSHNILQEEIPPQV-CNMGSLEKLNLSHN 515 (848)
Q Consensus 446 ~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N 515 (848)
++..+..+ ..+++|+.|+|++|.+++..+. .+..+++|+.|++++|+++......+ ..+++|+...+..+
T Consensus 469 ~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~ 541 (594)
T 2p1m_B 469 SDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDER 541 (594)
T ss_dssp SHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSS
T ss_pred cHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCC
Confidence 44333333 3455555555555555433222 22335556666666665533222223 33455554444444
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=6.3e-26 Score=238.11 Aligned_cols=226 Identities=24% Similarity=0.270 Sum_probs=165.1
Q ss_pred CCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEc
Q 038003 79 PHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158 (848)
Q Consensus 79 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 158 (848)
..+..+++..+.+...+ .+..+++|++|++++|.++. + +.++.+++|++|+|++|++++ + ..++.+++|++|+|
T Consensus 19 ~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L 92 (272)
T 3rfs_A 19 AETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLIL 92 (272)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEEC
T ss_pred HHHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEEC
Confidence 34445556666555432 35567777777777777763 2 357777777777777777775 2 36777777777888
Q ss_pred CCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCC
Q 038003 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGS 238 (848)
Q Consensus 159 ~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ 238 (848)
++|++++..+..++++++|++|++++|++++..+..|+.+++|++|+|++|++++..+..++.+++|+.|++++|++++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 172 (272)
T 3rfs_A 93 TGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSL 172 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCcc
Confidence 77777766666677777888888888887766666677777888888888888766666677778888888888888766
Q ss_pred CCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccccCCccce
Q 038003 239 IPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIER 317 (848)
Q Consensus 239 ~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 317 (848)
.+..++.+++|++|++++|++++..|..+..+++|++|++++|.+.+. +++|+.|++..|.++|.+|.++..
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 173 PEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred CHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccc
Confidence 666677788888888888888877777778888888888888877643 456788888888888888876543
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=3.3e-25 Score=232.65 Aligned_cols=211 Identities=25% Similarity=0.313 Sum_probs=186.9
Q ss_pred cCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCcc
Q 038003 75 FSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLID 154 (848)
Q Consensus 75 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 154 (848)
+..+++|+.|++++|.++. + +.++.+++|++|+|++|.+++. +.++.+++|++|+|++|++++..|..++.+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 5678899999999998863 3 4588999999999999999873 4889999999999999999987778889999999
Q ss_pred EEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccC
Q 038003 155 KLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNS 234 (848)
Q Consensus 155 ~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~ 234 (848)
+|+|++|++++..|..++++++|++|++++|++++..+..++.+++|++|+|++|++++..+..++.+++|++|++++|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 99999999997777778999999999999999998777788999999999999999998777778999999999999999
Q ss_pred CCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCC
Q 038003 235 LSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKS 296 (848)
Q Consensus 235 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 296 (848)
+++..|..+..+++|++|++++|.+.+. +++|++|+++.|.++|.+|..++.+..
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred CCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 9988787889999999999999988754 457899999999999999998887654
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.2e-24 Score=226.14 Aligned_cols=206 Identities=24% Similarity=0.268 Sum_probs=180.5
Q ss_pred CCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCcccccccccccEEEc
Q 038003 337 PNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLIL 416 (848)
Q Consensus 337 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 416 (848)
.+.+.+++++++++.. |..+. ++++.|++++|++++..+..|..+++|++|+|++|+++...+..|..+++|++|++
T Consensus 16 ~~~~~l~~~~~~l~~i-p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 16 NNKNSVDCSSKKLTAI-PSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTTEEECTTSCCSSC-CSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCCEEEccCCCCCcc-CCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 3567889999988854 33332 57889999999998777778999999999999999999777777889999999999
Q ss_pred cCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCChhHHhhhcccceecccCcccCcC
Q 038003 417 NLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEE 496 (848)
Q Consensus 417 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 496 (848)
++|++++..+..|..+++|++|++++|++++..+..|+.+++|++|+|++|+|++..+..|..+++|+.|+|++|++++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 99999987778889999999999999999988888899999999999999999987777899999999999999999887
Q ss_pred CCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccCCCC
Q 038003 497 IPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGPI 545 (848)
Q Consensus 497 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~ 545 (848)
.+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++....
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 7778999999999999999999887788999999999999999987544
No 330
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=5.2e-25 Score=235.96 Aligned_cols=225 Identities=19% Similarity=0.158 Sum_probs=186.8
Q ss_pred CCCcEEeccCCcccccc-cc--cccCCCCCcEEEccccCCCCCCchhh--hccccccEEEecccCcCCCCC----ccccC
Q 038003 79 PHLANLNLSFNLFFGNI-PL--QIGNLSKLQYLDLGSNQLSGLIPPEI--GKLNQLRRLYLDMNQLHGTIP----PEIGQ 149 (848)
Q Consensus 79 ~~l~~L~l~~n~~~~~~-p~--~~~~l~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~~p----~~~~~ 149 (848)
..++.+.+.++.++... .. .+..+++|++|+|++|.+++.+|..+ +.+++|++|+|++|++++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 45788888888775321 11 12345779999999999999999988 999999999999999998766 45567
Q ss_pred cCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCC--C--cccccccccccccccccccccccCcc----cccC
Q 038003 150 LSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGS--I--PSIIGKLKSLLQLDLSENQFSGSIPL----SLGN 221 (848)
Q Consensus 150 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~l~~ 221 (848)
+++|++|+|++|++++..|..++++++|++|+|++|++.+. + +..++.+++|++|+|++|+++ .++. .++.
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 99999999999999988888999999999999999998752 2 233578999999999999997 3443 2578
Q ss_pred CcccceeeccccCCCCCCCCcccCc---ccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCc
Q 038003 222 LSSLTMMSLFNNSLSGSIPPILGNL---KSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLS 298 (848)
Q Consensus 222 l~~L~~L~l~~n~l~~~~p~~l~~l---~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 298 (848)
+++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 8999999999999998888888777 69999999999999 5677664 7999999999999974 33 67889999
Q ss_pred ccccccccccc
Q 038003 299 ELELCTNLLRG 309 (848)
Q Consensus 299 ~L~L~~N~l~~ 309 (848)
.|++++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 99999998864
No 331
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=8.1e-25 Score=226.80 Aligned_cols=191 Identities=25% Similarity=0.299 Sum_probs=90.8
Q ss_pred CCCCccCceEEcCCCCceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCC
Q 038003 39 ISPCSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGL 118 (848)
Q Consensus 39 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 118 (848)
.+||.|.|.+|.... ..+++++. .++ .+|..+. +.|++|+|++|++++.
T Consensus 2 ~~Cp~~~gC~C~~~~---~~l~~~~~-------------------------~l~-~~p~~~~--~~l~~L~L~~n~l~~~ 50 (251)
T 3m19_A 2 KTCETVTGCTCNEGK---KEVDCQGK-------------------------SLD-SVPSGIP--ADTEKLDLQSTGLATL 50 (251)
T ss_dssp --CHHHHSSEEEGGG---TEEECTTC-------------------------CCS-SCCSCCC--TTCCEEECTTSCCCCC
T ss_pred ccCCCCCceEcCCCC---eEEecCCC-------------------------Ccc-ccCCCCC--CCCCEEEccCCCcCcc
Confidence 368899999996422 12334443 333 3343333 3455555555555554
Q ss_pred CchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCccccccc
Q 038003 119 IPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKL 198 (848)
Q Consensus 119 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l 198 (848)
.|..|+++++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+
T Consensus 51 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 130 (251)
T 3m19_A 51 SDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRL 130 (251)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccC
Confidence 44455555555555555555554444444555555555555555554333444455555555555555544333344444
Q ss_pred ccccccccccccccccCcccccCCcccceeeccccCCCCCCCCcccCccccccccccccccc
Q 038003 199 KSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLN 260 (848)
Q Consensus 199 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~ 260 (848)
++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|++.
T Consensus 131 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 131 TKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 44444444444444333333444444444444444444333333333444444444444433
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.3e-24 Score=229.89 Aligned_cols=203 Identities=26% Similarity=0.270 Sum_probs=154.2
Q ss_pred cCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCcc
Q 038003 75 FSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLID 154 (848)
Q Consensus 75 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 154 (848)
+.++++++.+++++|.++ .+|..+. +.+++|+|++|++++..|..|.++++|++|+|++|++++. |.. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCC
Confidence 556778888888888886 5676664 6788888888888877778888888888888888888753 332 6778888
Q ss_pred EEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccC
Q 038003 155 KLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNS 234 (848)
Q Consensus 155 ~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~ 234 (848)
+|+|++|+++ .+|..+..+++|++|++++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 8888888887 677777888888888888888886666778888888888888888876666667777778888888887
Q ss_pred CCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCcccc
Q 038003 235 LSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLY 284 (848)
Q Consensus 235 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 284 (848)
+++..+..+..+++|++|+|++|+++ .+|..+..+.+|+.|+|++|.+.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 77554455667777777777777777 45556666667777777777664
No 333
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=7e-26 Score=259.81 Aligned_cols=188 Identities=14% Similarity=0.170 Sum_probs=148.1
Q ss_pred cccceeccCCceeEEEEEcCCCCEEEEEEcccccccCC----chhHHHHHHHHHHHhcCCCCcccceEEEeecCCeeEEE
Q 038003 602 DEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGN----MADHDEFLNEVLALKEIRHRNNVKFHGFCYNGPHSFLV 677 (848)
Q Consensus 602 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lV 677 (848)
...+.||+|+||+||+|.. .+..+|+|+......... ....+++.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3456899999999999954 478899998655432211 11245588999999999999999666666677788999
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCC
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGP 757 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~ 757 (848)
|||+++++|.++++. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999865 457999999999999999 9999999999999998 999999999998754
Q ss_pred CCCC-------cccccccccccCcccccc--CCCCccchhhhHHHHHHHHHhCCCCCc
Q 038003 758 HSSN-------WTEFAGTFGYAAPEIAYT--MRATEKYDVYSFGVLVFEVIKGNHPRD 806 (848)
Q Consensus 758 ~~~~-------~~~~~g~~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~P~~ 806 (848)
.... ....+||+.|||||++.. ..|+..+|+||..+-..+-+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 3221 135689999999999986 567888999999999999998888763
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=1.1e-26 Score=254.64 Aligned_cols=264 Identities=19% Similarity=0.148 Sum_probs=194.1
Q ss_pred EEeccCCcccccccccccCCCCCcEEEccccCCCCCCc----hhhhccc-cccEEEecccCcCCCCCccccCc-----CC
Q 038003 83 NLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIP----PEIGKLN-QLRRLYLDMNQLHGTIPPEIGQL-----SL 152 (848)
Q Consensus 83 ~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l-----~~ 152 (848)
.++++.|.++|.+|..+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35678888888888877777778888888888887666 6777787 88888888888887777777775 88
Q ss_pred ccEEEcCCCcCCCCCCCcccCc-----cccceEEeecccccCCCcccccc-----cccccccccccccccccCc----cc
Q 038003 153 IDKLALCHNNLHGSIPSSLGNL-----SNLAVLYLYKNSLSGSIPSIIGK-----LKSLLQLDLSENQFSGSIP----LS 218 (848)
Q Consensus 153 L~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~p----~~ 218 (848)
|++|+|++|.+++..+..++.. ++|++|+|++|++++..+..++. .++|++|+|++|++++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 8888888888886666544443 78888888888888666655433 2588888999888885443 33
Q ss_pred ccCCc-ccceeeccccCCCCCCCCccc----Cc-ccccccccccccccCc----CCCcccC-CCCCceEEccCccccccC
Q 038003 219 LGNLS-SLTMMSLFNNSLSGSIPPILG----NL-KSLSALGLHINQLNGF----IPPSIGN-LSSLRVLYLYNNGLYGFV 287 (848)
Q Consensus 219 l~~l~-~L~~L~l~~n~l~~~~p~~l~----~l-~~L~~L~l~~N~l~~~----~p~~l~~-l~~L~~L~Ls~N~l~~~~ 287 (848)
+..++ +|++|+|++|++++..+..+. .+ ++|++|+|++|++++. ++..+.. .++|++|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45555 889999999988876665444 34 5899999999988863 3444554 358999999999998765
Q ss_pred c----ccccCCCCCccccccccccccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccc
Q 038003 288 P----EEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNW 357 (848)
Q Consensus 288 p----~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 357 (848)
+ ..+..+++|+.|++++|.+.+..+..+.. ....+..+++|+.||+++|++.+..+..+
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~-----------l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKA-----------LGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHH-----------HHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHH-----------HHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 4 34567788999999999866543332221 12356678899999999999987644433
No 335
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=2.6e-24 Score=227.56 Aligned_cols=205 Identities=24% Similarity=0.253 Sum_probs=186.2
Q ss_pred cccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCcccc
Q 038003 98 QIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNL 177 (848)
Q Consensus 98 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 177 (848)
.++++++|+++++++|+++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|.+++ +|.. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcC
Confidence 3788999999999999998 5676664 689999999999998888999999999999999999995 4443 789999
Q ss_pred ceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCCCCCcccCcccccccccccc
Q 038003 178 AVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHIN 257 (848)
Q Consensus 178 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N 257 (848)
++|++++|+++ .+|..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999999 78889999999999999999999877788999999999999999999877778899999999999999
Q ss_pred cccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCcccccccccccc
Q 038003 258 QLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRG 309 (848)
Q Consensus 258 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 309 (848)
++++..+..|..+++|++|+|++|+++ .+|..+..+.+|+.+++++|.+..
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 999877778899999999999999998 578888888999999999998864
No 336
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=1e-26 Score=252.44 Aligned_cols=264 Identities=14% Similarity=0.171 Sum_probs=217.8
Q ss_pred CCccCceEEcCCCCceEEEeccccCccccccCCccCCC--CCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCC
Q 038003 41 PCSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSF--PHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGL 118 (848)
Q Consensus 41 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l--~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 118 (848)
|.+|.++.|+.. .+..++++++.+.. ..+..+ ++++.|++++|.+.+..|. +..+++|++|+|++|.+++.
T Consensus 36 c~~W~~~~~~~~--~~~~l~l~~~~~~~----~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~ 108 (336)
T 2ast_B 36 CKRWYRLASDES--LWQTLDLTGKNLHP----DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS 108 (336)
T ss_dssp CHHHHHHHTCST--TSSEEECTTCBCCH----HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH
T ss_pred HHHHHHHhcCch--hheeeccccccCCH----HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH
Confidence 457999988743 46678888776653 235556 8999999999999887665 66899999999999999876
Q ss_pred -CchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCC-cCCCC-CCCcccCccccceEEeecc-cccCC-Ccc
Q 038003 119 -IPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN-NLHGS-IPSSLGNLSNLAVLYLYKN-SLSGS-IPS 193 (848)
Q Consensus 119 -~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~-~p~~l~~l~~L~~L~l~~N-~l~~~-~p~ 193 (848)
+|..+..+++|++|+|++|++++..|..++.+++|++|+|++| .+++. +|..+.++++|++|++++| .+++. ++.
T Consensus 109 ~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 188 (336)
T 2ast_B 109 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQV 188 (336)
T ss_dssp HHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHH
T ss_pred HHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHH
Confidence 8888999999999999999999888999999999999999999 68763 6777889999999999999 88864 677
Q ss_pred cccccc-cccccccccc--ccc-ccCcccccCCcccceeeccccC-CCCCCCCcccCccccccccccccc-ccCcCCCcc
Q 038003 194 IIGKLK-SLLQLDLSEN--QFS-GSIPLSLGNLSSLTMMSLFNNS-LSGSIPPILGNLKSLSALGLHINQ-LNGFIPPSI 267 (848)
Q Consensus 194 ~~~~l~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L~l~~n~-l~~~~p~~l~~l~~L~~L~l~~N~-l~~~~p~~l 267 (848)
.+..++ +|++|+|++| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.......+
T Consensus 189 ~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l 268 (336)
T 2ast_B 189 AVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLEL 268 (336)
T ss_dssp HHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGG
T ss_pred HHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHH
Confidence 788999 9999999999 565 5677888899999999999999 777788899999999999999995 332222367
Q ss_pred cCCCCCceEEccCccccccCcccccCC-CCCccccccccccccccCCcc
Q 038003 268 GNLSSLRVLYLYNNGLYGFVPEEIGYL-KSLSELELCTNLLRGVIPHSI 315 (848)
Q Consensus 268 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~l 315 (848)
.++++|++|++++| ++. +.+..+ .++..|+++.|.+++..|...
T Consensus 269 ~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 269 GEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp GGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred hcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCcc
Confidence 88999999999999 443 233444 347778899999998887654
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=2.2e-24 Score=231.06 Aligned_cols=203 Identities=19% Similarity=0.162 Sum_probs=178.4
Q ss_pred CCCCCcEEeccCCcccccccccc--cCCCCCcEEEccccCCCCCCc----hhhhccccccEEEecccCcCCCCCccccCc
Q 038003 77 SFPHLANLNLSFNLFFGNIPLQI--GNLSKLQYLDLGSNQLSGLIP----PEIGKLNQLRRLYLDMNQLHGTIPPEIGQL 150 (848)
Q Consensus 77 ~l~~l~~L~l~~n~~~~~~p~~~--~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 150 (848)
.+++|++|+|++|.+++.+|..+ +.+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..++.+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 34679999999999999999998 999999999999999998766 455689999999999999998888999999
Q ss_pred CCccEEEcCCCcCCCC--C--CCcccCccccceEEeecccccCCCcc----cccccccccccccccccccccCcccccCC
Q 038003 151 SLIDKLALCHNNLHGS--I--PSSLGNLSNLAVLYLYKNSLSGSIPS----IIGKLKSLLQLDLSENQFSGSIPLSLGNL 222 (848)
Q Consensus 151 ~~L~~L~L~~n~l~~~--~--p~~l~~l~~L~~L~l~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 222 (848)
++|++|+|++|++.+. + +..++.+++|++|+|++|+++ .++. .++.+++|++|+|++|++++.+|..+..+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 9999999999998753 2 234578999999999999997 3443 35788999999999999998889888877
Q ss_pred ---cccceeeccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccc
Q 038003 223 ---SSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYG 285 (848)
Q Consensus 223 ---~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 285 (848)
++|++|+|++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|+.|+|++|+++.
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999999 7788775 7999999999999975 43 6788999999999999874
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.2e-23 Score=216.33 Aligned_cols=196 Identities=18% Similarity=0.172 Sum_probs=121.7
Q ss_pred CCcEEeccCCcccccccccccCCCCCcEEEccccC-CCCCCchhhhccccccEEEecc-cCcCCCCCccccCcCCccEEE
Q 038003 80 HLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQ-LSGLIPPEIGKLNQLRRLYLDM-NQLHGTIPPEIGQLSLIDKLA 157 (848)
Q Consensus 80 ~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~ 157 (848)
+|++|++++|.+++..+..|+++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67777777777776666677777777777777775 6655555677777777777777 777755556667777777777
Q ss_pred cCCCcCCCCCCCcccCccccc---eEEeecc-cccCCCccccccccccc-ccccccccccccCcccccCCcccceeeccc
Q 038003 158 LCHNNLHGSIPSSLGNLSNLA---VLYLYKN-SLSGSIPSIIGKLKSLL-QLDLSENQFSGSIPLSLGNLSSLTMMSLFN 232 (848)
Q Consensus 158 L~~n~l~~~~p~~l~~l~~L~---~L~l~~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~ 232 (848)
+++|++++ +|. ++.+++|+ +|++++| ++++..+..|..+++|+ +|++++|+++ .+|......++|+.|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCC
Confidence 77777764 555 66666666 7777776 66655455566666666 6666666666 4443332235566666666
Q ss_pred cC-CCCCCCCcccCc-ccccccccccccccCcCCCcccCCCCCceEEccCc
Q 038003 233 NS-LSGSIPPILGNL-KSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281 (848)
Q Consensus 233 n~-l~~~~p~~l~~l-~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N 281 (848)
|+ +++..+..|..+ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 63 554334445555 5555555555555533222 3445555555443
No 339
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=1.3e-25 Score=246.03 Aligned_cols=263 Identities=20% Similarity=0.142 Sum_probs=174.0
Q ss_pred EEEccccCCCCCCchhhhccccccEEEecccCcCCCCC----ccccCcC-CccEEEcCCCcCCCCCCCcccCc-----cc
Q 038003 107 YLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIP----PEIGQLS-LIDKLALCHNNLHGSIPSSLGNL-----SN 176 (848)
Q Consensus 107 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l-----~~ 176 (848)
+++|++|+++|.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57899999999988888877889999999999997766 6777888 89999999999987777777775 88
Q ss_pred cceEEeecccccCCCccccccc-----ccccccccccccccccCccccc----C-CcccceeeccccCCCCCCCCc----
Q 038003 177 LAVLYLYKNSLSGSIPSIIGKL-----KSLLQLDLSENQFSGSIPLSLG----N-LSSLTMMSLFNNSLSGSIPPI---- 242 (848)
Q Consensus 177 L~~L~l~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~----~-l~~L~~L~l~~n~l~~~~p~~---- 242 (848)
|++|+|++|++++..+..++.. ++|++|+|++|++++..+..+. . .++|++|+|++|.+++..+..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999987776655443 7889999999998876665543 3 358888888888887543332
Q ss_pred ccCcc-cccccccccccccCcCCCccc----CC-CCCceEEccCcccccc----CcccccC-CCCCcccccccccccccc
Q 038003 243 LGNLK-SLSALGLHINQLNGFIPPSIG----NL-SSLRVLYLYNNGLYGF----VPEEIGY-LKSLSELELCTNLLRGVI 311 (848)
Q Consensus 243 l~~l~-~L~~L~l~~N~l~~~~p~~l~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~L~~N~l~~~~ 311 (848)
+..++ +|++|+|++|++++..+..+. .. ++|++|+|++|.+++. ++..+.. .++|++|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 33443 777777777777766554433 23 4777777777777653 2333333 235666666655555432
Q ss_pred CCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEE
Q 038003 312 PHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLD 391 (848)
Q Consensus 312 p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~ 391 (848)
+..+. ..+..+++|+.|+|++|.+.+..+..+ ..++..+..+++|+.||
T Consensus 242 ~~~l~--------------~~~~~l~~L~~L~L~~n~l~~i~~~~~-----------------~~l~~~~~~l~~L~~Ld 290 (362)
T 3goz_A 242 LENLK--------------LLKDSLKHLQTVYLDYDIVKNMSKEQC-----------------KALGAAFPNIQKIILVD 290 (362)
T ss_dssp HHHHH--------------HTTTTTTTCSEEEEEHHHHTTCCHHHH-----------------HHHHTTSTTCCEEEEEC
T ss_pred HHHHH--------------HHHhcCCCccEEEeccCCccccCHHHH-----------------HHHHHHhccCCceEEEe
Confidence 21111 223445556666666665432221100 01223455666677777
Q ss_pred ccCCccCCC
Q 038003 392 LSSNHIVGK 400 (848)
Q Consensus 392 Ls~N~l~~~ 400 (848)
+++|++...
T Consensus 291 L~~N~l~~~ 299 (362)
T 3goz_A 291 KNGKEIHPS 299 (362)
T ss_dssp TTSCBCCGG
T ss_pred cCCCcCCCc
Confidence 777776644
No 340
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.1e-23 Score=216.70 Aligned_cols=203 Identities=22% Similarity=0.273 Sum_probs=175.9
Q ss_pred cccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccC-cCCCCCccccCcCCccEEEcCC-CcCCCCCCCcc
Q 038003 94 NIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQ-LHGTIPPEIGQLSLIDKLALCH-NNLHGSIPSSL 171 (848)
Q Consensus 94 ~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~l 171 (848)
.+|. +. ++|++|+|++|++++..+..|+++++|++|+|++|+ +++..+..|+.+++|++|+|++ |++++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 3565 43 489999999999998877799999999999999997 8866667899999999999999 99997666789
Q ss_pred cCccccceEEeecccccCCCccccccccccc---ccccccc-cccccCcccccCCcccc-eeeccccCCCCCCCCcccCc
Q 038003 172 GNLSNLAVLYLYKNSLSGSIPSIIGKLKSLL---QLDLSEN-QFSGSIPLSLGNLSSLT-MMSLFNNSLSGSIPPILGNL 246 (848)
Q Consensus 172 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~l~~n~l~~~~p~~l~~l 246 (848)
.++++|++|++++|++++ +|. ++.+++|+ +|++++| ++++..+..|..+++|+ +|++++|+++ .+|......
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~ 178 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG 178 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC
Confidence 999999999999999996 676 88888888 9999999 99977777899999999 9999999999 666654444
Q ss_pred cccccccccccc-ccCcCCCcccCC-CCCceEEccCccccccCcccccCCCCCcccccccc
Q 038003 247 KSLSALGLHINQ-LNGFIPPSIGNL-SSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTN 305 (848)
Q Consensus 247 ~~L~~L~l~~N~-l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 305 (848)
++|+.|++++|+ +++..+..|..+ ++|++|++++|++++..+. .+++|+.|+++++
T Consensus 179 ~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 179 TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 899999999995 998778889999 9999999999999865443 6778888888765
No 341
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.89 E-value=4.4e-23 Score=207.16 Aligned_cols=184 Identities=25% Similarity=0.296 Sum_probs=115.8
Q ss_pred CCccCceEEcCCCCceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCc
Q 038003 41 PCSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIP 120 (848)
Q Consensus 41 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 120 (848)
.|.|.+|.|+..+ ++ .+| ....++|++|++++|.+++..+..|+.+++|++|+|++|++++..+
T Consensus 6 ~C~~~~v~c~~~~--l~-----------~~p---~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (208)
T 2o6s_A 6 SCSGTTVECYSQG--RT-----------SVP---TGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPN 69 (208)
T ss_dssp EEETTEEECCSSC--CS-----------SCC---SCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred EECCCEEEecCCC--cc-----------CCC---CCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccCh
Confidence 3789999997532 11 111 1223567777777777776555566777777777777777776555
Q ss_pred hhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCccccccccc
Q 038003 121 PEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKS 200 (848)
Q Consensus 121 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 200 (848)
..|.++++|++|+|++|++++..+..++.+++|++|+|++|++++..+..+.++++|++|++++|++++..+..+..+++
T Consensus 70 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 149 (208)
T 2o6s_A 70 GVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 149 (208)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCC
Confidence 55677777777777777777555555666777777777777776554555666666666666666666555555666666
Q ss_pred ccccccccccccccCcccccCCcccceeeccccCCCCCCCCcccCcc
Q 038003 201 LLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLK 247 (848)
Q Consensus 201 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~ 247 (848)
|++|+|++|.+.+ .+++|++|+++.|+++|.+|..++.++
T Consensus 150 L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 150 LQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp CCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 6666666665543 233455555555555555555554443
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.2e-25 Score=248.92 Aligned_cols=239 Identities=18% Similarity=0.182 Sum_probs=196.6
Q ss_pred ccCCCCCCcEEeccCCccccc----ccccccCCCCCcEEEcccc---CCCCCCchhh-------hccccccEEEecccCc
Q 038003 74 SFSSFPHLANLNLSFNLFFGN----IPLQIGNLSKLQYLDLGSN---QLSGLIPPEI-------GKLNQLRRLYLDMNQL 139 (848)
Q Consensus 74 ~~~~l~~l~~L~l~~n~~~~~----~p~~~~~l~~L~~L~Ls~n---~l~~~~p~~~-------~~l~~L~~L~L~~n~l 139 (848)
.+..+++|++|+|++|.+++. ++..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|++
T Consensus 27 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l 106 (386)
T 2ca6_A 27 VLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAF 106 (386)
T ss_dssp HHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCC
T ss_pred HHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcC
Confidence 356788999999999999876 4455778999999999985 5666777666 6889999999999999
Q ss_pred CC----CCCccccCcCCccEEEcCCCcCCCCCCCcc----cCc---------cccceEEeeccccc-CCCc---cccccc
Q 038003 140 HG----TIPPEIGQLSLIDKLALCHNNLHGSIPSSL----GNL---------SNLAVLYLYKNSLS-GSIP---SIIGKL 198 (848)
Q Consensus 140 ~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l----~~l---------~~L~~L~l~~N~l~-~~~p---~~~~~l 198 (848)
++ .+|..+..+++|++|+|++|.+++..+..+ ..+ ++|++|++++|+++ +.+| ..+..+
T Consensus 107 ~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 186 (386)
T 2ca6_A 107 GPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSH 186 (386)
T ss_dssp CTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhC
Confidence 97 478888999999999999999975444333 334 89999999999997 4455 467788
Q ss_pred cccccccccccccc--c---cCcccccCCcccceeeccccCCC----CCCCCcccCcccccccccccccccCc----CCC
Q 038003 199 KSLLQLDLSENQFS--G---SIPLSLGNLSSLTMMSLFNNSLS----GSIPPILGNLKSLSALGLHINQLNGF----IPP 265 (848)
Q Consensus 199 ~~L~~L~L~~N~l~--~---~~p~~l~~l~~L~~L~l~~n~l~----~~~p~~l~~l~~L~~L~l~~N~l~~~----~p~ 265 (848)
++|++|+|++|+++ | .+|..+..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|++++. ++.
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 266 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 266 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHH
Confidence 99999999999998 3 34558889999999999999996 56788889999999999999999866 456
Q ss_pred cc--cCCCCCceEEccCccccc----cCcccc-cCCCCCccccccccccccccC
Q 038003 266 SI--GNLSSLRVLYLYNNGLYG----FVPEEI-GYLKSLSELELCTNLLRGVIP 312 (848)
Q Consensus 266 ~l--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~~~~p 312 (848)
.+ +.+++|++|+|++|.+++ .+|..+ ..+++|+.|++++|.+++..|
T Consensus 267 ~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 267 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 66 348999999999999987 477777 668999999999999987653
No 343
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=1.1e-22 Score=210.56 Aligned_cols=159 Identities=29% Similarity=0.314 Sum_probs=92.7
Q ss_pred CccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccc
Q 038003 386 KLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLS 465 (848)
Q Consensus 386 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 465 (848)
+|+.|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 45555555555555555555555555555555555555555555555556666666666555555555555666666666
Q ss_pred cCcCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccCCC
Q 038003 466 NNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHGP 544 (848)
Q Consensus 466 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~ 544 (848)
+|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|++++|++++.
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 6666555555555556666666666666554444555666666666666666655555566666666666666666543
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=5.4e-26 Score=251.74 Aligned_cols=113 Identities=18% Similarity=0.268 Sum_probs=52.3
Q ss_pred CCCccCeEeccCcccCC-----CCCCcccCccccceeccccCcCC----CCChhHHhhhcccceecccCcccCcC----C
Q 038003 431 SLTKLQYLDLSTNKLSS-----SIPKSIGNLLKLHYLNLSNNQLS----HKIPTEFEKLIHLSELDLSHNILQEE----I 497 (848)
Q Consensus 431 ~l~~L~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~ 497 (848)
.+++|++|+|++|+++. ..|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.|++. +
T Consensus 185 ~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l 264 (386)
T 2ca6_A 185 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAV 264 (386)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHH
T ss_pred hCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHH
Confidence 34444444444444431 22224444444555555555443 23444444445555555555555433 2
Q ss_pred Cccc--cCCCCCccccCCCCcccC----CCcchh-ccccCceeecCCCCccCC
Q 038003 498 PPQV--CNMGSLEKLNLSHNNLSD----FIPRCF-EEMRSLSCIDISYNELHG 543 (848)
Q Consensus 498 p~~~--~~l~~L~~L~Ls~N~l~~----~~~~~~-~~l~~L~~l~ls~N~l~~ 543 (848)
|..+ +.+++|++|+|++|.+++ .+|..+ .++++|+.|++++|++++
T Consensus 265 ~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 265 VDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 3333 224555555555555554 234443 334555555555555544
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=5.2e-23 Score=219.85 Aligned_cols=195 Identities=29% Similarity=0.390 Sum_probs=119.8
Q ss_pred cCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCcc
Q 038003 75 FSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLID 154 (848)
Q Consensus 75 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 154 (848)
+..+++|++|++++|.+.. +| .+..+++|++|+|++|++++. |+ +..+++|++|+|++|++++ +| .++.+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCC
Confidence 3456667777777776653 44 466677777777777777654 33 6677777777777777664 23 566666777
Q ss_pred EEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccC
Q 038003 155 KLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNS 234 (848)
Q Consensus 155 ~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~ 234 (848)
+|+|++|++++ +|. +..+++|++|++++|++++..+ ++.+++|++|+|++|++++. +. +..+++|+.|++++|+
T Consensus 111 ~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCc
Confidence 77777776664 332 6666667777777766664332 66666666666666666643 22 6666666666666666
Q ss_pred CCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccc
Q 038003 235 LSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYG 285 (848)
Q Consensus 235 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 285 (848)
+++..+ +..+++|++|++++|++++..+ +..+++|++|++++|++++
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 664322 5556666666666666654432 5556666666666666553
No 346
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=1.2e-24 Score=236.14 Aligned_cols=256 Identities=19% Similarity=0.204 Sum_probs=122.0
Q ss_pred CcEEeccCCcccccccccccCC--CCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCC-CCccccCcCCccEEE
Q 038003 81 LANLNLSFNLFFGNIPLQIGNL--SKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGT-IPPEIGQLSLIDKLA 157 (848)
Q Consensus 81 l~~L~l~~n~~~~~~p~~~~~l--~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~ 157 (848)
++.+++++|.+. |..++.+ +++++|++++|.+++..|. +..+++|++|+|++|.+++. +|..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 455555555543 3334444 5555555555555544332 33455555555555555433 444455555555555
Q ss_pred cCCCcCCCCCCCcccCccccceEEeecc-cccCC-Ccccccccccccccccccc-ccccc-CcccccCCc-ccceeeccc
Q 038003 158 LCHNNLHGSIPSSLGNLSNLAVLYLYKN-SLSGS-IPSIIGKLKSLLQLDLSEN-QFSGS-IPLSLGNLS-SLTMMSLFN 232 (848)
Q Consensus 158 L~~n~l~~~~p~~l~~l~~L~~L~l~~N-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~-~L~~L~l~~ 232 (848)
|++|.+++..|..++.+++|++|++++| .+++. ++..+..+++|++|+|++| .+++. ++..+..++ +|++|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 5555554444444445555555555555 34331 3333444444555555544 44432 333344444 444444444
Q ss_pred cCCCCCCCCcccCccccccccccccccc-CcCCCcccCCCCCceEEccCcc-ccccCcccccCCCCCccccccccccccc
Q 038003 233 NSLSGSIPPILGNLKSLSALGLHINQLN-GFIPPSIGNLSSLRVLYLYNNG-LYGFVPEEIGYLKSLSELELCTNLLRGV 310 (848)
Q Consensus 233 n~l~~~~p~~l~~l~~L~~L~l~~N~l~-~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 310 (848)
|.+ .++ +.+|..+..+++|++|++++|. +++..+..+..+++|+.|++++|. +.
T Consensus 205 ~~~----------------------~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~ 260 (336)
T 2ast_B 205 YRK----------------------NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DI 260 (336)
T ss_dssp CGG----------------------GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TC
T ss_pred Ccc----------------------cCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CC
Confidence 421 222 2233344455555555555555 444444455555555555555553 11
Q ss_pred cCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCc-ccccEeecccccccCCCCCCCCC
Q 038003 311 IPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNF-SKLSTFIVSMNNISGSIPPDIGN 383 (848)
Q Consensus 311 ~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~l~~N~i~~~~p~~l~~ 383 (848)
.+.. ...+..+++|+.|++++| ++. ..+..+ ..+..|+++.|++++..|..++.
T Consensus 261 ~~~~---------------~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 261 IPET---------------LLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp CGGG---------------GGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CHHH---------------HHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCcccc
Confidence 1111 112344566777777666 332 122222 22445555666666555555543
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=9.7e-23 Score=217.72 Aligned_cols=211 Identities=23% Similarity=0.316 Sum_probs=181.5
Q ss_pred cEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCC
Q 038003 82 ANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161 (848)
Q Consensus 82 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 161 (848)
..+.+..+.+...+ .+.++++|++|++++|.++. +| .+..+++|++|+|++|++++. |. +..+++|++|+|++|
T Consensus 22 ~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n 95 (308)
T 1h6u_A 22 IKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGN 95 (308)
T ss_dssp HHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSC
T ss_pred HHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCC
Confidence 33445556665443 35678999999999999985 55 699999999999999999954 44 999999999999999
Q ss_pred cCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCCCCC
Q 038003 162 NLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPP 241 (848)
Q Consensus 162 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~ 241 (848)
++++ +| .+.++++|++|++++|++++ ++. +..+++|++|+|++|++++..+ +..+++|++|++++|++++. +.
T Consensus 96 ~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~ 168 (308)
T 1h6u_A 96 PLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP 168 (308)
T ss_dssp CCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG
T ss_pred cCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh
Confidence 9995 44 69999999999999999996 443 8999999999999999996544 88999999999999999964 43
Q ss_pred cccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccccccccccc
Q 038003 242 ILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGV 310 (848)
Q Consensus 242 ~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 310 (848)
+..+++|+.|++++|++++..+ +..+++|++|++++|++++.. .+..+++|+.|++++|.+++.
T Consensus 169 -l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 169 -LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp -GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEECC
T ss_pred -hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeecC
Confidence 8999999999999999997654 889999999999999999765 389999999999999999864
No 348
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=1.7e-23 Score=239.65 Aligned_cols=210 Identities=21% Similarity=0.262 Sum_probs=127.1
Q ss_pred ccCCCCCCCCCCCCCCCC-----ccCce-EEcCCCCceEEEeccccCccccccCCccCCCCCCcEEeccCCccccccccc
Q 038003 25 LLSSWTLYPANATKISPC-----SWFGI-SCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQ 98 (848)
Q Consensus 25 ~l~sw~~~~~~~~~~~~c-----~w~gv-~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~ 98 (848)
.+.+|. .+.++| .|.|+ .|.. .+++ .|+|++|.+++ +|..
T Consensus 32 ~l~~W~------~~~~~~~~~~~~~~~l~~C~~--~~L~-------------------------~L~Ls~n~L~~-lp~~ 77 (571)
T 3cvr_A 32 AWDKWE------KQALPGENRNEAVSLLKECLI--NQFS-------------------------ELQLNRLNLSS-LPDN 77 (571)
T ss_dssp HHHHHH------TTCCTTCCHHHHHHHHHHHHH--TTCS-------------------------EEECCSSCCSC-CCSC
T ss_pred HHHHHh------ccCCccccccchhhhcccccc--CCcc-------------------------EEEeCCCCCCc-cCHh
Confidence 456675 245778 79999 7863 2344 44555555544 4544
Q ss_pred ccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccc
Q 038003 99 IGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLA 178 (848)
Q Consensus 99 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 178 (848)
+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|+
T Consensus 78 l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~ 143 (571)
T 3cvr_A 78 LP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLE 143 (571)
T ss_dssp CC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCC
T ss_pred Hc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCcccc
Confidence 42 55666666666655 344 335556666666666654 454 443 56666666666664 454 455666
Q ss_pred eEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCCCCCcccCcccc-------cc
Q 038003 179 VLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSL-------SA 251 (848)
Q Consensus 179 ~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L-------~~ 251 (848)
+|+|++|++++ +|. .+++|++|+|++|++++ +|. +. ++|+.|+|++|+|+ .+|. +.. +| +.
T Consensus 144 ~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~ 211 (571)
T 3cvr_A 144 YINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIF 211 (571)
T ss_dssp EEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEE
T ss_pred EEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceE
Confidence 66666666664 444 34566666666666664 554 44 56666666666666 4555 443 55 77
Q ss_pred cccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCC
Q 038003 252 LGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLK 295 (848)
Q Consensus 252 L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 295 (848)
|+|++|+|+. +|..+..+++|+.|+|++|.+++.+|..+..+.
T Consensus 212 L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 212 FRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp EECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred EecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 8888888774 666677788888888888888877777766544
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=4e-22 Score=217.19 Aligned_cols=203 Identities=14% Similarity=0.142 Sum_probs=114.0
Q ss_pred CccCceEEcCCCCceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCc-
Q 038003 42 CSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIP- 120 (848)
Q Consensus 42 c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p- 120 (848)
|.|..|.|+.. +++ .+|. .+ .+++++|+|++|.++..-+.+|+++++|++|+|++|++.+.+|
T Consensus 9 C~~~~v~C~~~--~Lt-----------~iP~-~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~ 72 (350)
T 4ay9_X 9 CSNRVFLCQES--KVT-----------EIPS-DL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEA 72 (350)
T ss_dssp EETTEEEEEST--TCC-----------SCCT-TC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECT
T ss_pred eeCCEEEecCC--CCC-----------ccCc-Cc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccCh
Confidence 78989999743 122 1222 11 2456777777777764333456777777777777777655444
Q ss_pred hhhhccccccE-EEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeec-ccccCCCccccccc
Q 038003 121 PEIGKLNQLRR-LYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYK-NSLSGSIPSIIGKL 198 (848)
Q Consensus 121 ~~~~~l~~L~~-L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~-N~l~~~~p~~~~~l 198 (848)
..|.++++|++ +.++.|++++..|..|..+++|++|++++|++++..+..+....++..|++.+ |++....+..|..+
T Consensus 73 ~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~ 152 (350)
T 4ay9_X 73 DVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGL 152 (350)
T ss_dssp TSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTS
T ss_pred hHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhc
Confidence 34566666553 45556666655566666666666666666666644444555555666666644 34543333444444
Q ss_pred c-cccccccccccccccCcccccCCcccceeeccc-cCCCCCCC-CcccCcccccccccccccccCc
Q 038003 199 K-SLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFN-NSLSGSIP-PILGNLKSLSALGLHINQLNGF 262 (848)
Q Consensus 199 ~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~-n~l~~~~p-~~l~~l~~L~~L~l~~N~l~~~ 262 (848)
. .+++|+|++|+|+ .+|.......+|+.|++++ |.++ .+| ..|..+++|++|+|++|+|+..
T Consensus 153 ~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 153 SFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp BSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred chhhhhhcccccccc-CCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcCcc
Confidence 3 4556666666665 3444444445566666553 3444 333 3445555555555555555543
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=1e-21 Score=197.16 Aligned_cols=180 Identities=25% Similarity=0.304 Sum_probs=151.1
Q ss_pred EEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCc
Q 038003 83 NLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNN 162 (848)
Q Consensus 83 ~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 162 (848)
.++++++.++ .+|..+ .++|++|+|++|++++..+..|+++++|++|+|++|++++..+..|..+++|++|+|++|+
T Consensus 11 ~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 4566677765 566554 4689999999999998777778999999999999999997666678899999999999999
Q ss_pred CCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCCCCCc
Q 038003 163 LHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPI 242 (848)
Q Consensus 163 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~ 242 (848)
+++..+..++++++|++|++++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|++++|.+.+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~---- 163 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT---- 163 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC----
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC----
Confidence 9966666788999999999999999977777788999999999999999976666788899999999999987753
Q ss_pred ccCcccccccccccccccCcCCCcccCCCC
Q 038003 243 LGNLKSLSALGLHINQLNGFIPPSIGNLSS 272 (848)
Q Consensus 243 l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~ 272 (848)
+++|++|+++.|+++|.+|.+++.++.
T Consensus 164 ---~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 164 ---CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ---TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ---CCCHHHHHHHHHhCCceeeccCccccC
Confidence 457888899999999988888876654
No 351
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1.9e-22 Score=211.87 Aligned_cols=166 Identities=18% Similarity=0.132 Sum_probs=127.1
Q ss_pred HHHhhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCC-c-------------hhHHHHHHHHHHHhcCCCC
Q 038003 594 IIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGN-M-------------ADHDEFLNEVLALKEIRHR 659 (848)
Q Consensus 594 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-~-------------~~~~~~~~E~~~l~~l~hp 659 (848)
.......|.+.+.||+|+||.||+|.+.+|+.||+|+++....... . .....+.+|++++++++
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-- 162 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-- 162 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--
Confidence 3444556778899999999999999887899999999865421110 0 13566889999999998
Q ss_pred cccceEEEeecCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeC
Q 038003 660 NNVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD 739 (848)
Q Consensus 660 ~iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~ 739 (848)
| +++.+++.. +..++||||++|++|.+ +.. .....++.|++.|+.|||+. ||+||||||+||+++
T Consensus 163 ~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~ 227 (282)
T 1zar_A 163 G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS 227 (282)
T ss_dssp T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE
T ss_pred C-CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE
Confidence 4 556555443 45699999999999988 422 12346999999999999999 999999999999999
Q ss_pred CCCCEEEeeccCccccCCCCCCcccccccccccCcccccc----------CCCCccchhhh
Q 038003 740 SNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYT----------MRATEKYDVYS 790 (848)
Q Consensus 740 ~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~----------~~~~~~~DiwS 790 (848)
++.+||+|||+|+.. ..++|||++.. .+++..+|+|.
T Consensus 228 -~~~vkl~DFG~a~~~-------------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 228 -EEGIWIIDFPQSVEV-------------GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp -TTEEEECCCTTCEET-------------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred -CCcEEEEECCCCeEC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 999999999998643 34688998753 34555566664
No 352
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1.2e-21 Score=213.45 Aligned_cols=216 Identities=17% Similarity=0.102 Sum_probs=167.8
Q ss_pred EEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCc-cccCcCCccE-EEcCC
Q 038003 83 NLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPP-EIGQLSLIDK-LALCH 160 (848)
Q Consensus 83 ~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~-L~L~~ 160 (848)
.++.++++++ .||..+ .+++++|+|++|+|+.+.+.+|+++++|++|+|++|++.+.+|. .|.++++|.+ +.++.
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 3456677776 678766 36889999999999866556789999999999999998776664 6788888765 66677
Q ss_pred CcCCCCCCCcccCccccceEEeecccccCCCccccccccccccccccc-ccccccCcccccCCc-ccceeeccccCCCCC
Q 038003 161 NNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSE-NQFSGSIPLSLGNLS-SLTMMSLFNNSLSGS 238 (848)
Q Consensus 161 n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~-~L~~L~l~~n~l~~~ 238 (848)
|++++..|..|.++++|++|++++|++++..+..+....++..|++.+ |++....+..|..+. .++.|+|++|+|+ .
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~ 168 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-E 168 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-E
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-C
Confidence 889877788889999999999999999876666677777888888865 567655555666664 6888999999998 5
Q ss_pred CCCcccCccccccccccc-ccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCccccc
Q 038003 239 IPPILGNLKSLSALGLHI-NQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELEL 302 (848)
Q Consensus 239 ~p~~l~~l~~L~~L~l~~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 302 (848)
+|.......+|+.|++++ |+++...+.+|..+++|++|+|++|+|+...+..+.++++|+.+++
T Consensus 169 i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 169 IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 233 (350)
T ss_dssp ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC
T ss_pred CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC
Confidence 666666677899999874 6777665667889999999999999998766666766666666655
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=8.5e-22 Score=225.65 Aligned_cols=188 Identities=27% Similarity=0.346 Sum_probs=164.2
Q ss_pred CCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEee
Q 038003 104 KLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLY 183 (848)
Q Consensus 104 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 183 (848)
+|++|+|++|++++ +|..+. ++|++|+|++|+|+ .+| +.+++|++|+|++|+|++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999997 777663 89999999999999 788 568999999999999996 888 765 99999999
Q ss_pred cccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCCCCCcccCcccccccccccccccCcC
Q 038003 184 KNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFI 263 (848)
Q Consensus 184 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~ 263 (848)
+|++++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. +. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 999997 666 68999999999999996 676 57899999999999996 777 66 89999999999999 56
Q ss_pred CCcccCCCCC-------ceEEccCccccccCcccccCCCCCccccccccccccccCCccceee
Q 038003 264 PPSIGNLSSL-------RVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVL 319 (848)
Q Consensus 264 p~~l~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 319 (848)
|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..+..+.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 66 654 77 99999999999 4788888899999999999999999998776543
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.85 E-value=1.2e-22 Score=241.49 Aligned_cols=229 Identities=22% Similarity=0.221 Sum_probs=126.3
Q ss_pred hHHHHHHHHHHHhccCCCCCCcccCCCCCCCCCCCCCCCCccCceEEcCCCCceEEEeccccCccccccCCccCCCCCCc
Q 038003 3 NEEAYALLKWKTSLQNQNLNSSLLSSWTLYPANATKISPCSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLA 82 (848)
Q Consensus 3 ~~~~~all~~k~~~~~~~~~~~~l~sw~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~ 82 (848)
+.+++||+++..+..... ...-++|.. +.+.++.|.++++.. .+|+.++|.++++.+. + ...++
T Consensus 131 ~~~~~~l~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~-~------~~~l~ 194 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSK--TAKKQQPTG-----DSTPSGTATNSAVST--PLTPKIELFANGKDEA-N------QALLQ 194 (727)
T ss_dssp -CCCHHHHHHHHHHHHHH--TTC---------------------------------------------------------
T ss_pred ccchhhhhhhhhhccccc--CcccCCCcC-----CCCccccCCCceecC--CccceEEeeCCCCCcc-h------hhHhh
Confidence 457889999998874431 123345532 234567899999875 5789999887776652 1 12234
Q ss_pred EEeccCCcccc---------cccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCc
Q 038003 83 NLNLSFNLFFG---------NIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLI 153 (848)
Q Consensus 83 ~L~l~~n~~~~---------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 153 (848)
.++|+.|.+.+ ..|..+..++.|++|+|++|.+. .+|..+.++++|++|+|++|+|+ .+|..|+.|++|
T Consensus 195 ~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L 272 (727)
T 4b8c_D 195 HKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNL 272 (727)
T ss_dssp ---------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTC
T ss_pred cCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCC
Confidence 44444444432 34677888888888888888887 67777778888888888888888 788888888888
Q ss_pred cEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcc-cceeeccc
Q 038003 154 DKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSS-LTMMSLFN 232 (848)
Q Consensus 154 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~l~~ 232 (848)
++|+|++|+|+ .+|..|++|++|++|+|++|.|+ .+|..|+.|++|++|+|++|.|++.+|..+..+.. +..|+|++
T Consensus 273 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~ 350 (727)
T 4b8c_D 273 RVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRD 350 (727)
T ss_dssp CEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhcc
Confidence 88888888888 77888888888888888888887 67777888888888888888888888877765532 23477888
Q ss_pred cCCCCCCCCcccCcccccccccccc
Q 038003 233 NSLSGSIPPILGNLKSLSALGLHIN 257 (848)
Q Consensus 233 n~l~~~~p~~l~~l~~L~~L~l~~N 257 (848)
|.++|.+|.. |..|+++.|
T Consensus 351 N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 351 NRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp CCCCCCCCCC---------------
T ss_pred CcccCcCccc------cceeEeecc
Confidence 8888777753 445556555
No 355
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=1.1e-20 Score=192.34 Aligned_cols=160 Identities=26% Similarity=0.270 Sum_probs=103.3
Q ss_pred CCCCCCccCceEEcCCCCceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCC
Q 038003 37 TKISPCSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLS 116 (848)
Q Consensus 37 ~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~ 116 (848)
.+.+.|+|.+|.|.... ++ .+|. .-.++|++|+|++|.+++..|..|+.+++|++|+|++|+++
T Consensus 14 ~~~~~Cs~~~v~c~~~~--l~-----------~ip~---~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~ 77 (229)
T 3e6j_A 14 PSQCSCSGTTVDCRSKR--HA-----------SVPA---GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG 77 (229)
T ss_dssp CTTCEEETTEEECTTSC--CS-----------SCCS---CCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCEEeCCEeEccCCC--cC-----------ccCC---CCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC
Confidence 46788999999997432 11 2221 11256777777777777666666777777777777777776
Q ss_pred CCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCccccc
Q 038003 117 GLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIG 196 (848)
Q Consensus 117 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~ 196 (848)
+..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|++++..+..|.
T Consensus 78 ~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 156 (229)
T 3e6j_A 78 ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFD 156 (229)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTT
T ss_pred CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHh
Confidence 554555667777777777777776555555666666666666666666 5666666666666666666666654445566
Q ss_pred ccccccccccccccccc
Q 038003 197 KLKSLLQLDLSENQFSG 213 (848)
Q Consensus 197 ~l~~L~~L~L~~N~l~~ 213 (848)
.+++|++|+|++|.+.+
T Consensus 157 ~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 157 RLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp TCTTCCEEECTTSCBCT
T ss_pred CCCCCCEEEeeCCCccC
Confidence 66666666666666553
No 356
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=1.5e-22 Score=233.25 Aligned_cols=203 Identities=20% Similarity=0.191 Sum_probs=131.5
Q ss_pred CCCCCCcEEeccCCcccccccccccCCCCCcEEEccccC-------------CCCCCchhhhccccccEEE-ecccCcCC
Q 038003 76 SSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQ-------------LSGLIPPEIGKLNQLRRLY-LDMNQLHG 141 (848)
Q Consensus 76 ~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~-------------l~~~~p~~~~~l~~L~~L~-L~~n~l~~ 141 (848)
...++|+.|+|++|.++ .+|.+|++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 56778888888888886 778888888888888887765 5667777778888888887 5665432
Q ss_pred CCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccC
Q 038003 142 TIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGN 221 (848)
Q Consensus 142 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 221 (848)
.|..+.+++|.++. +|. ..|+.|+|++|++++ +|. |+.+++|++|+|++|+|+ .+|..++.
T Consensus 424 ----------~L~~l~l~~n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLK-MEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHH-HHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccc-cCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 23334444444442 111 136666666666664 454 666666666666666666 56666666
Q ss_pred CcccceeeccccCCCCCCCCcccCcccccccccccccccCcC-CCcccCCCCCceEEccCccccccCccc---ccCCCCC
Q 038003 222 LSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFI-PPSIGNLSSLRVLYLYNNGLYGFVPEE---IGYLKSL 297 (848)
Q Consensus 222 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~---~~~l~~L 297 (848)
+++|+.|+|++|+|++ +| .++.+++|++|+|++|+|++.. |..++.+++|+.|+|++|.+++.+|.. +..+++|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 6666666666666664 44 5666666666666666666655 666666677777777777666554321 2335666
Q ss_pred cccc
Q 038003 298 SELE 301 (848)
Q Consensus 298 ~~L~ 301 (848)
+.|+
T Consensus 563 ~~L~ 566 (567)
T 1dce_A 563 SSIL 566 (567)
T ss_dssp SEEE
T ss_pred CccC
Confidence 6664
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=1e-20 Score=219.20 Aligned_cols=190 Identities=25% Similarity=0.343 Sum_probs=115.5
Q ss_pred CcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCC
Q 038003 81 LANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCH 160 (848)
Q Consensus 81 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 160 (848)
+..++++.+.+...++ +..|++|++|+|++|.+.. +| .|+.|++|+.|+|++|++++..| +..+++|++|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 4444555555554333 4556666666666666664 23 46666667777776666664333 66666666666666
Q ss_pred CcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCCCC
Q 038003 161 NNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIP 240 (848)
Q Consensus 161 n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p 240 (848)
|.+++ +| .++.+++|+.|+|++|++++ + ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++..|
T Consensus 97 N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 66663 33 46666666666666666664 2 3466666666666666666643 456666666666666666665444
Q ss_pred CcccCcccccccccccccccCcCCCcccCCCCCceEEccCcccccc
Q 038003 241 PILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGF 286 (848)
Q Consensus 241 ~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 286 (848)
+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+.+.
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 66666666666666666643 2456666666666666666543
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=1e-20 Score=200.09 Aligned_cols=187 Identities=25% Similarity=0.346 Sum_probs=108.4
Q ss_pred EEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCc
Q 038003 83 NLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNN 162 (848)
Q Consensus 83 ~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 162 (848)
.+.+..+.+.+..+ +..+++|++|++++|.++.. | .+..+++|++|+|++|++++..| ++.+++|++|+|++|+
T Consensus 28 ~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~ 101 (291)
T 1h6t_A 28 KDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENK 101 (291)
T ss_dssp HHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred HHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCc
Confidence 33444444443222 34566666666666666543 3 36666666666666666664332 6666666666666666
Q ss_pred CCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCCCCCc
Q 038003 163 LHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPI 242 (848)
Q Consensus 163 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~ 242 (848)
+++ +| .++.+++|++|++++|++++. ..+..+++|++|+|++|++++. ..+..+++|++|++++|++++..|
T Consensus 102 l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-- 173 (291)
T 1h6t_A 102 VKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 173 (291)
T ss_dssp CCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred CCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--
Confidence 653 22 256666666666666666642 3455666666666666666643 455666666666666666664333
Q ss_pred ccCcccccccccccccccCcCCCcccCCCCCceEEccCccccc
Q 038003 243 LGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYG 285 (848)
Q Consensus 243 l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 285 (848)
+..+++|+.|++++|++++. | .+..+++|+.|++++|++..
T Consensus 174 l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 56666666666666666543 2 35666666666666666654
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=1.8e-20 Score=198.30 Aligned_cols=174 Identities=26% Similarity=0.410 Sum_probs=154.2
Q ss_pred cCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCcc
Q 038003 75 FSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLID 154 (848)
Q Consensus 75 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 154 (848)
+..+++|+.|++++|.+.. +| .++.+++|++|+|++|++++..| ++++++|++|+|++|++++ +| .++.+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 5578899999999999974 44 58999999999999999997544 9999999999999999985 44 499999999
Q ss_pred EEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccC
Q 038003 155 KLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNS 234 (848)
Q Consensus 155 ~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~ 234 (848)
+|+|++|++++ + ..+..+++|++|++++|++++. ..++.+++|++|+|++|++++..| +..+++|+.|++++|.
T Consensus 116 ~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 99999999996 3 5688999999999999999965 678999999999999999996555 9999999999999999
Q ss_pred CCCCCCCcccCcccccccccccccccCc
Q 038003 235 LSGSIPPILGNLKSLSALGLHINQLNGF 262 (848)
Q Consensus 235 l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 262 (848)
+++ ++ .+..+++|+.|++++|++...
T Consensus 190 i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 190 ISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred CCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 995 44 489999999999999999864
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=6.3e-20 Score=212.62 Aligned_cols=181 Identities=26% Similarity=0.376 Sum_probs=158.5
Q ss_pred cCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCcc
Q 038003 75 FSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLID 154 (848)
Q Consensus 75 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 154 (848)
+..|++|+.|++++|.+.. +| .|+.|++|++|+|++|++++..| +..+++|++|+|++|++++ +| .++.+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 5678899999999999974 44 69999999999999999997654 9999999999999999985 44 799999999
Q ss_pred EEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccC
Q 038003 155 KLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNS 234 (848)
Q Consensus 155 ~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~ 234 (848)
+|+|++|++++ + ..+..+++|+.|+|++|++++. ..++.+++|+.|+|++|++++..| +..+++|+.|+|++|+
T Consensus 113 ~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 113 SLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 99999999995 3 4689999999999999999965 678999999999999999997766 9999999999999999
Q ss_pred CCCCCCCcccCcccccccccccccccCcCCCcccC
Q 038003 235 LSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGN 269 (848)
Q Consensus 235 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~ 269 (848)
|++. +.+..+++|+.|+|++|++.+.....+..
T Consensus 187 i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~ 219 (605)
T 1m9s_A 187 ISDL--RALAGLKNLDVLELFSQECLNKPINHQSN 219 (605)
T ss_dssp CCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSS
T ss_pred CCCC--hHHccCCCCCEEEccCCcCcCCccccccc
Confidence 9964 46899999999999999998754444433
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=7e-20 Score=185.19 Aligned_cols=151 Identities=23% Similarity=0.272 Sum_probs=73.6
Q ss_pred EeecccccccCCCCCCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcc
Q 038003 365 TFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNK 444 (848)
Q Consensus 365 ~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 444 (848)
.++++++.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4455555554 3343332 345555555555554444445555555555555555554444455555555555555555
Q ss_pred cCCCCCCcccCccccceeccccCcCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCccc
Q 038003 445 LSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLS 518 (848)
Q Consensus 445 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 518 (848)
|+...+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++.
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 55444444444555555555555554444444444444444444444444444444444444444444444443
No 362
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=6.8e-20 Score=185.26 Aligned_cols=152 Identities=22% Similarity=0.283 Sum_probs=83.3
Q ss_pred EEEccCCccCCCCcccccccccccEEEccCCcCCCCCC-cccCCCCccCeEeccCcccCCCCCCcccCccccceeccccC
Q 038003 389 VLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVP-LEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNN 467 (848)
Q Consensus 389 ~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 467 (848)
.+++++|.++ .+|..+. ..+++|+|++|+|++..+ ..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4444444444 2333221 233455555555554322 23455555555555555555555555555555555555555
Q ss_pred cCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccCC
Q 038003 468 QLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHG 543 (848)
Q Consensus 468 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~ 543 (848)
+|++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|++++|++++
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 5555555555555566666666666655555556666666666666666666555666666666666666666654
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=5.4e-20 Score=201.17 Aligned_cols=157 Identities=26% Similarity=0.278 Sum_probs=103.4
Q ss_pred CccEEEccCCccCCCCccccc-ccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceecc
Q 038003 386 KLQVLDLSSNHIVGKIPVQLE-MLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNL 464 (848)
Q Consensus 386 ~L~~L~Ls~N~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 464 (848)
.++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 456666666666655555555 6666666666666666555566666667777777777766655566666777777777
Q ss_pred ccCcCCCCChhHHhhhcccceecccCcccCcCCCccc---cCCCCCccccCCCCcccCCCcchhccccCc--eeecCCCC
Q 038003 465 SNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQV---CNMGSLEKLNLSHNNLSDFIPRCFEEMRSL--SCIDISYN 539 (848)
Q Consensus 465 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L--~~l~ls~N 539 (848)
++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++..+..|..++.+ +.|++++|
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N 199 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSS
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCC
Confidence 7777766666667777777777777777765433334 456777777777777777666667666663 66777777
Q ss_pred ccC
Q 038003 540 ELH 542 (848)
Q Consensus 540 ~l~ 542 (848)
++.
T Consensus 200 ~~~ 202 (361)
T 2xot_A 200 PLE 202 (361)
T ss_dssp CEE
T ss_pred Ccc
Confidence 775
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=1.4e-19 Score=182.91 Aligned_cols=134 Identities=22% Similarity=0.264 Sum_probs=79.4
Q ss_pred CCcEEeccCCccccccc-ccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEc
Q 038003 80 HLANLNLSFNLFFGNIP-LQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158 (848)
Q Consensus 80 ~l~~L~l~~n~~~~~~p-~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 158 (848)
.+++|+|++|.+++..| ..|+.+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 34566666666665543 23566666666666666666555556666666666666666666555555666666666666
Q ss_pred CCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccc
Q 038003 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSG 213 (848)
Q Consensus 159 ~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 213 (848)
++|+|++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 6666665555555556666666666666655555555555555555555555553
No 365
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=2.1e-19 Score=181.71 Aligned_cols=134 Identities=25% Similarity=0.302 Sum_probs=81.8
Q ss_pred CCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEc
Q 038003 79 PHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158 (848)
Q Consensus 79 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 158 (848)
+.|+.|+|++|.+++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 45666666666666555556666666666666666666666666666666666666666666444444555666666666
Q ss_pred CCCcCCCCCCCcccCccccceEEeecccccCCCccccccccccccccccccccc
Q 038003 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFS 212 (848)
Q Consensus 159 ~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 212 (848)
++|+|++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666666555555666666666666666665544445555555555555555554
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=9.9e-20 Score=199.09 Aligned_cols=133 Identities=28% Similarity=0.275 Sum_probs=70.8
Q ss_pred CCcEEeccCCccccccccccc-CCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEc
Q 038003 80 HLANLNLSFNLFFGNIPLQIG-NLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158 (848)
Q Consensus 80 ~l~~L~l~~n~~~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 158 (848)
.++.|+|++|.+++..+..+. .+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 355666666666555555554 5666666666666665555555566666666666666655444445555555555555
Q ss_pred CCCcCCCCCCCcccCccccceEEeecccccCCCcccc---ccccccccccccccccc
Q 038003 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSII---GKLKSLLQLDLSENQFS 212 (848)
Q Consensus 159 ~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~ 212 (848)
++|+|++..|..|.++++|++|+|++|++++..+..| ..+++|++|+|++|+|+
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 5555554445555555555555555555553222222 23444444444444444
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=4e-19 Score=180.86 Aligned_cols=134 Identities=29% Similarity=0.362 Sum_probs=66.2
Q ss_pred ccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCChhHHhhhcccceecc
Q 038003 409 SSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDL 488 (848)
Q Consensus 409 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 488 (848)
++|+.|+|++|++++..|..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|+|++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 44444444444444444444444444555555555444433344444455555555555554444444444555555555
Q ss_pred cCcccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccCC
Q 038003 489 SHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELHG 543 (848)
Q Consensus 489 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~ 543 (848)
++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|++++|++++
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 555554 344445555555555555555554444445555555555555555543
No 368
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=4.5e-20 Score=219.46 Aligned_cols=218 Identities=23% Similarity=0.200 Sum_probs=128.4
Q ss_pred CCCcEEeccCCcccccccccccCCCCCcE-----EEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCc
Q 038003 79 PHLANLNLSFNLFFGNIPLQIGNLSKLQY-----LDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLI 153 (848)
Q Consensus 79 ~~l~~L~l~~n~~~~~~p~~~~~l~~L~~-----L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 153 (848)
++++.|+|++|.+.. +|..+.....|.. ++++.|.+. ..|..+..+++|+.|+|++|.+. .+|..+..+++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 568899999998875 4544333333333 233334444 45888999999999999999998 889888999999
Q ss_pred cEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeecccc
Q 038003 154 DKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNN 233 (848)
Q Consensus 154 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n 233 (848)
++|+|++|+|+ .+|..|++|++|++|+|++|+|+ .+|..|+.|++|++|+|++|.|+ .+|..|+.+++|+.|+|++|
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTS
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCC
Confidence 99999999999 89999999999999999999999 78999999999999999999998 88999999999999999999
Q ss_pred CCCCCCCCcccCccc-ccccccccccccCcCCCcccCCCCCceEEccCc--------cccccCcccccCCCCCccccccc
Q 038003 234 SLSGSIPPILGNLKS-LSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN--------GLYGFVPEEIGYLKSLSELELCT 304 (848)
Q Consensus 234 ~l~~~~p~~l~~l~~-L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N--------~l~~~~p~~~~~l~~L~~L~L~~ 304 (848)
.|++.+|..+..+.. +..++|++|.+++.+|.. |+.|++++| .+.+..+..+..+..+....++.
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~ 400 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSY 400 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------------------------------------------
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeeec
Confidence 999988888766533 345889999999988864 556677776 33333344445555556666666
Q ss_pred cccc
Q 038003 305 NLLR 308 (848)
Q Consensus 305 N~l~ 308 (848)
|-+.
T Consensus 401 Nil~ 404 (727)
T 4b8c_D 401 NTLC 404 (727)
T ss_dssp -CCC
T ss_pred cccc
Confidence 6554
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=1.2e-19 Score=188.92 Aligned_cols=171 Identities=21% Similarity=0.289 Sum_probs=124.9
Q ss_pred CCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEE
Q 038003 77 SFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKL 156 (848)
Q Consensus 77 ~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 156 (848)
.+..++.+++++|.+++ ++ .+..+++|++|++++|+++. +| .++.+++|++|+|++|++++. |. ++.+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEE
Confidence 45566777788777764 33 57778888888888888874 45 678888888888888888854 33 7788888888
Q ss_pred EcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCC
Q 038003 157 ALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLS 236 (848)
Q Consensus 157 ~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~ 236 (848)
+|++|++++ +|.... ++|++|++++|++++ ++ .++.+++|++|+|++|++++. + .+..+++|+.|++++|+++
T Consensus 91 ~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIPS--ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTCCC--SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCcccc--CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 888888874 444322 778888888888875 33 477778888888888888753 3 5777778888888888877
Q ss_pred CCCCCcccCcccccccccccccccCc
Q 038003 237 GSIPPILGNLKSLSALGLHINQLNGF 262 (848)
Q Consensus 237 ~~~p~~l~~l~~L~~L~l~~N~l~~~ 262 (848)
+. ..+..+++|+.|++++|++.+.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 54 5677777777777777777654
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=2.9e-21 Score=222.55 Aligned_cols=120 Identities=28% Similarity=0.310 Sum_probs=67.3
Q ss_pred ccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceecccc
Q 038003 387 LQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSN 466 (848)
Q Consensus 387 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 466 (848)
|+.|+|++|+|++ +|. +..+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++ +| .|+.+++|+.|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 4555555555553 333 555555555555555555 445555556666666666666654 34 555666666666666
Q ss_pred CcCCCCC-hhHHhhhcccceecccCcccCcCCCcc---ccCCCCCcccc
Q 038003 467 NQLSHKI-PTEFEKLIHLSELDLSHNILQEEIPPQ---VCNMGSLEKLN 511 (848)
Q Consensus 467 N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~---~~~l~~L~~L~ 511 (848)
|+|++.+ |..|..+++|+.|+|++|+|++.+|.. +..+++|+.|+
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 6666554 566666666666666666665543321 22355666654
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=3e-19 Score=177.32 Aligned_cols=154 Identities=18% Similarity=0.270 Sum_probs=104.3
Q ss_pred cCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccce
Q 038003 100 GNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAV 179 (848)
Q Consensus 100 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 179 (848)
+.+++|++|++++|+++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 55666777777777776 344 5667777777777777554 2346666777777777777777666667777777777
Q ss_pred EEeecccccCCCccccccccccccccccccc-ccccCcccccCCcccceeeccccCCCCCCCCcccCccccccccccccc
Q 038003 180 LYLYKNSLSGSIPSIIGKLKSLLQLDLSENQ-FSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQ 258 (848)
Q Consensus 180 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~ 258 (848)
|++++|++++..|..++.+++|++|+|++|+ ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|++|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 7777777776666677777777777777776 44 455 57777777777777777774 33 56777777777777777
Q ss_pred ccC
Q 038003 259 LNG 261 (848)
Q Consensus 259 l~~ 261 (848)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 653
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=7.4e-19 Score=174.51 Aligned_cols=155 Identities=21% Similarity=0.305 Sum_probs=117.5
Q ss_pred hhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCccccccccccc
Q 038003 123 IGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLL 202 (848)
Q Consensus 123 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 202 (848)
.+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..++.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 467778888888888887 566 5778888888888888665 234677788888888888888876777788888888
Q ss_pred ccccccccccccCcccccCCcccceeeccccC-CCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCc
Q 038003 203 QLDLSENQFSGSIPLSLGNLSSLTMMSLFNNS-LSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNN 281 (848)
Q Consensus 203 ~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~-l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N 281 (848)
+|+|++|++++..|..++.+++|++|++++|. ++ .+| .+..+++|++|++++|++++. + .+..+++|++|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCc
Confidence 88888888887777788888888888888887 55 455 577788888888888888753 3 5777888888888888
Q ss_pred cccc
Q 038003 282 GLYG 285 (848)
Q Consensus 282 ~l~~ 285 (848)
++.+
T Consensus 192 ~i~~ 195 (197)
T 4ezg_A 192 TIGG 195 (197)
T ss_dssp ----
T ss_pred ccCC
Confidence 7753
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=3.7e-19 Score=185.11 Aligned_cols=171 Identities=23% Similarity=0.332 Sum_probs=143.1
Q ss_pred CCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceE
Q 038003 101 NLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVL 180 (848)
Q Consensus 101 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 180 (848)
.+.+++.+++++|.+++. + .+..+++|++|++++|+++ .+| .++.+++|++|+|++|++++..| ++++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 577888999999999864 4 6899999999999999998 566 78899999999999999996444 8999999999
Q ss_pred EeecccccCCCcccccccccccccccccccccccCcccccCCcccceeeccccCCCCCCCCcccCccccccccccccccc
Q 038003 181 YLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLN 260 (848)
Q Consensus 181 ~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~ 260 (848)
++++|++++ +|.... ++|++|+|++|++++ ++ .+..+++|+.|++++|++++. + .+..+++|+.|++++|+++
T Consensus 91 ~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIPS--ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTCCC--SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCcccc--CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 999999985 444333 889999999999985 33 588899999999999999854 3 6888888899999999888
Q ss_pred CcCCCcccCCCCCceEEccCcccccc
Q 038003 261 GFIPPSIGNLSSLRVLYLYNNGLYGF 286 (848)
Q Consensus 261 ~~~p~~l~~l~~L~~L~Ls~N~l~~~ 286 (848)
+. ..+..+++|++|++++|.+...
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 76 5678888888888888888755
No 374
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=1.7e-18 Score=179.58 Aligned_cols=141 Identities=16% Similarity=0.142 Sum_probs=107.2
Q ss_pred CCcccceeccCCceeEEEEEc-CCCCE--EEEEEcccccccCC--------------------chhHHHHHHHHHHHhcC
Q 038003 600 DFDEKFCIGKGGQGSVYKAEL-PSGDI--VAVKKFNSQLLSGN--------------------MADHDEFLNEVLALKEI 656 (848)
Q Consensus 600 ~~~~~~~lg~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~~~--------------------~~~~~~~~~E~~~l~~l 656 (848)
-|++.+.||+|+||.||+|.. .+|+. ||||+++....... ......+.+|+++++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367788999999999999987 67888 99999755421100 01123578899999999
Q ss_pred CCCcc--cceEEEeecCCeeEEEEeccCC-C----CHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHh-hCCCCCeEE
Q 038003 657 RHRNN--VKFHGFCYNGPHSFLVCEYLDR-G----SLARILGDDVTAKELGWNRRINVIKGVANALSYLH-HDCLPSIIH 728 (848)
Q Consensus 657 ~hp~i--v~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH-~~~~~~ivH 728 (848)
.|+++ +.++++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.||| +. ||+|
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 88864 344442 356899999942 3 66665422 123456789999999999999 88 9999
Q ss_pred cCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 729 RDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 729 ~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
|||||+|||++. .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999998 9999999999765
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=9.6e-18 Score=165.58 Aligned_cols=110 Identities=25% Similarity=0.307 Sum_probs=53.1
Q ss_pred CCcEEeccCCcccccccc-cccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEc
Q 038003 80 HLANLNLSFNLFFGNIPL-QIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLAL 158 (848)
Q Consensus 80 ~l~~L~l~~n~~~~~~p~-~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 158 (848)
++++|+|++|.+++..|. .|+.+++|++|+|++|++++..|..|+++++|++|+|++|+|++..|..|..+++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 445555555555433332 2445555555555555555444445555555555555555555444444444444444444
Q ss_pred CCCcCCCCCCCcccCccccceEEeecccccC
Q 038003 159 CHNNLHGSIPSSLGNLSNLAVLYLYKNSLSG 189 (848)
Q Consensus 159 ~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 189 (848)
++|+|++..|..+..+++|++|+|++|.+++
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 4444444444444444444444444444443
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=1.7e-17 Score=163.78 Aligned_cols=131 Identities=28% Similarity=0.348 Sum_probs=89.9
Q ss_pred cEEeccCCcccccccccccCCCCCcEEEccccCCCCCCch-hhhccccccEEEecccCcCCCCCccccCcCCccEEEcCC
Q 038003 82 ANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPP-EIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCH 160 (848)
Q Consensus 82 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 160 (848)
+.+++++|.++ .+|..+.. +|++|+|++|++++..|. .|+++++|++|+|++|++++..|..|+.+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56777777773 66765543 777777777777765543 367777777777777777766677777777777777777
Q ss_pred CcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccC
Q 038003 161 NNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSI 215 (848)
Q Consensus 161 n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 215 (848)
|+|++..|..|+++++|++|+|++|++++.+|..|+.+++|++|+|++|.+++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 7777666666666777777777777776666666666666666666666666443
No 377
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=1.8e-17 Score=159.95 Aligned_cols=133 Identities=23% Similarity=0.234 Sum_probs=87.0
Q ss_pred CCCCcEEeccCCccc-ccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEE
Q 038003 78 FPHLANLNLSFNLFF-GNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKL 156 (848)
Q Consensus 78 l~~l~~L~l~~n~~~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 156 (848)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 356777777777776 66777677777777777777777654 566777777777777777776666666666677777
Q ss_pred EcCCCcCCCC-CCCcccCccccceEEeecccccCCCc---cccccccccccccccccccc
Q 038003 157 ALCHNNLHGS-IPSSLGNLSNLAVLYLYKNSLSGSIP---SIIGKLKSLLQLDLSENQFS 212 (848)
Q Consensus 157 ~L~~n~l~~~-~p~~l~~l~~L~~L~l~~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~ 212 (848)
+|++|++++. .+..++.+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 7777766642 11456666666666666666664333 35556666666666666555
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=7e-18 Score=181.99 Aligned_cols=103 Identities=17% Similarity=0.122 Sum_probs=72.2
Q ss_pred CCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCcc-EEEccCCccCCCCcccccccccccEE
Q 038003 336 HPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQ-VLDLSSNHIVGKIPVQLEMLSSLNKL 414 (848)
Q Consensus 336 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~-~L~Ls~N~l~~~~~~~l~~l~~L~~L 414 (848)
+++|+.|+|++|+++.+...+|.++.+|+.+++.+| +..+.+..|.++++|+ .+++.+ .++.+.+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 456666666666666666666666666777776666 5555566677777777 777776 6665666777777777777
Q ss_pred EccCCcCCCCCCcccCCCCccCeEec
Q 038003 415 ILNLNQLSGGVPLEFGSLTKLQYLDL 440 (848)
Q Consensus 415 ~L~~N~l~~~~~~~~~~l~~L~~L~L 440 (848)
+++.|+++...+.+|.++++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 77777777666777777777777653
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=2.8e-18 Score=185.06 Aligned_cols=262 Identities=14% Similarity=0.037 Sum_probs=169.0
Q ss_pred cccccccccccccccCcCCCcccC-CCCCceEEccCcccc--ccCcccccCCCCCccccccccccccccCCccceeeccc
Q 038003 246 LKSLSALGLHINQLNGFIPPSIGN-LSSLRVLYLYNNGLY--GFVPEEIGYLKSLSELELCTNLLRGVIPHSIERVLLNQ 322 (848)
Q Consensus 246 l~~L~~L~l~~N~l~~~~p~~l~~-l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~L~~ 322 (848)
+.+++.|.++++- ...--..+.. +++|+.|||++|++. ......+ +.+..+.+..|
T Consensus 24 ~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~----------------- 82 (329)
T 3sb4_A 24 ANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMAN----------------- 82 (329)
T ss_dssp HHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTT-----------------
T ss_pred hCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCccccc---ccccccccccc-----------------
Confidence 5667777777642 1111112333 667888888888776 2111111 11222333332
Q ss_pred cCCCCccccccCC--------CCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccC
Q 038003 323 NNLSGKMYEAFGD--------HPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSS 394 (848)
Q Consensus 323 n~l~~~~~~~~~~--------l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~ 394 (848)
.++..+|.+ +++|+.|+|.+ .++.+...+|.++++|+.+++..|.+....+..|..+.++..+.+..
T Consensus 83 ----~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~ 157 (329)
T 3sb4_A 83 ----FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGS 157 (329)
T ss_dssp ----EECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTC
T ss_pred ----ccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcc
Confidence 223345555 77888888877 77777777777788888888888877766677777777777776665
Q ss_pred Ccc----CCCCccccccccccc--------------------------EEEccCCcCCCCCCccc-CCCCccCeEeccCc
Q 038003 395 NHI----VGKIPVQLEMLSSLN--------------------------KLILNLNQLSGGVPLEF-GSLTKLQYLDLSTN 443 (848)
Q Consensus 395 N~l----~~~~~~~l~~l~~L~--------------------------~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N 443 (848)
+.. .......|.++..|+ .+.+.++-.. .....+ ..+++|+.|+|++|
T Consensus 158 ~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n 236 (329)
T 3sb4_A 158 SDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKT 236 (329)
T ss_dssp THHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTB
T ss_pred hhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCC
Confidence 322 222333444444444 3333222110 000011 12578888888888
Q ss_pred ccCCCCCCcccCccccceeccccCcCCCCChhHHhhhcccc-eecccCcccCcCCCccccCCCCCccccCCCCcccCCCc
Q 038003 444 KLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLS-ELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIP 522 (848)
Q Consensus 444 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 522 (848)
+++.+.+.+|.++++|+.|+|.+| ++.+.+..|.++.+|+ .|++.+ .++...+..|.++++|+.|++++|+++.+.+
T Consensus 237 ~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~ 314 (329)
T 3sb4_A 237 NATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGD 314 (329)
T ss_dssp CCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECT
T ss_pred CcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccch
Confidence 888777778888888888888887 7777778888888888 888888 6776777888888888888888888888888
Q ss_pred chhccccCceeecC
Q 038003 523 RCFEEMRSLSCIDI 536 (848)
Q Consensus 523 ~~~~~l~~L~~l~l 536 (848)
.+|.++++|+.++.
T Consensus 315 ~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 315 ELFGNGVPSKLIYK 328 (329)
T ss_dssp TTTCTTCCCCEEEC
T ss_pred hhhcCCcchhhhcc
Confidence 88888888888763
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=4.2e-17 Score=157.36 Aligned_cols=133 Identities=23% Similarity=0.212 Sum_probs=96.6
Q ss_pred CCCCcEEEccccCCC-CCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceE
Q 038003 102 LSKLQYLDLGSNQLS-GLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVL 180 (848)
Q Consensus 102 l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 180 (848)
.++|++|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 478888999988887 67788888888888888888888854 667777777777777777776666666667777777
Q ss_pred EeecccccCCC-cccccccccccccccccccccccCc---ccccCCcccceeeccccCCC
Q 038003 181 YLYKNSLSGSI-PSIIGKLKSLLQLDLSENQFSGSIP---LSLGNLSSLTMMSLFNNSLS 236 (848)
Q Consensus 181 ~l~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~l~~n~l~ 236 (848)
++++|++++.. +..++.+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777777432 2566667777777777777764433 35666666666666666665
No 381
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=2.5e-17 Score=155.40 Aligned_cols=128 Identities=21% Similarity=0.251 Sum_probs=91.8
Q ss_pred CCCCcEEeccCCccc-ccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEE
Q 038003 78 FPHLANLNLSFNLFF-GNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKL 156 (848)
Q Consensus 78 l~~l~~L~l~~n~~~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 156 (848)
.++|+.|++++|.++ +.+|..++.+++|++|+|++|.+++. ..++.+++|++|+|++|++++.+|..++.+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 466778888888887 67777777888888888888887765 667777788888888888776677777777777777
Q ss_pred EcCCCcCCCC-CCCcccCccccceEEeecccccCCCc---ccccccccccccccc
Q 038003 157 ALCHNNLHGS-IPSSLGNLSNLAVLYLYKNSLSGSIP---SIIGKLKSLLQLDLS 207 (848)
Q Consensus 157 ~L~~n~l~~~-~p~~l~~l~~L~~L~l~~N~l~~~~p---~~~~~l~~L~~L~L~ 207 (848)
++++|++++. .|..++++++|++|++++|.+++..+ ..++.+++|++|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 7777777752 33566677777777777777765444 356666666666665
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=1.2e-16 Score=150.82 Aligned_cols=129 Identities=22% Similarity=0.291 Sum_probs=105.1
Q ss_pred cccccEEEccCCcCC-CCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCChhHHhhhccccee
Q 038003 408 LSSLNKLILNLNQLS-GGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSEL 486 (848)
Q Consensus 408 l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 486 (848)
.++|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..++.+++|++|+|++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 366777777777777 66777778888888888888888765 678888888888888888887788888888889999
Q ss_pred cccCcccCcC-CCccccCCCCCccccCCCCcccCCCc---chhccccCceeecCCC
Q 038003 487 DLSHNILQEE-IPPQVCNMGSLEKLNLSHNNLSDFIP---RCFEEMRSLSCIDISY 538 (848)
Q Consensus 487 ~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~l~ls~ 538 (848)
++++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999988763 34778889999999999999988665 5788899999998864
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=4.7e-16 Score=151.32 Aligned_cols=134 Identities=26% Similarity=0.303 Sum_probs=87.6
Q ss_pred CccCceEEcCCCCceEEEeccccCccccccCCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCch
Q 038003 42 CSWFGISCNHAGSRVISITMSTLGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPP 121 (848)
Q Consensus 42 c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 121 (848)
|.|.+|.|+... ++ .+| ....++|+.|++++|.+++..+..|+.+++|++|+|++|++++..+.
T Consensus 7 C~~~~l~~~~~~--l~-----------~~p---~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (177)
T 2o6r_A 7 CSGTEIRCNSKG--LT-----------SVP---TGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDG 70 (177)
T ss_dssp EETTEEECCSSC--CS-----------SCC---TTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred eCCCEEEecCCC--Cc-----------cCC---CCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChh
Confidence 789999997532 11 111 12235677777777777765555667777777777777777765555
Q ss_pred hhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCC
Q 038003 122 EIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSI 191 (848)
Q Consensus 122 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~ 191 (848)
.|+++++|++|+|++|++++..+..+..+++|++|+|++|++++..+..+..+++|++|++++|.+++..
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 6677777777777777777655555666777777777777776444444566666777777766666443
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=6e-16 Score=152.64 Aligned_cols=109 Identities=23% Similarity=0.317 Sum_probs=58.9
Q ss_pred CCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEe
Q 038003 103 SKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYL 182 (848)
Q Consensus 103 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l 182 (848)
++|++|+|++|+++ .+|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 35555555555555 34555555555555555555555444455555555555555555555444445555555555555
Q ss_pred ecccccCCCccccccccccccccccccccc
Q 038003 183 YKNSLSGSIPSIIGKLKSLLQLDLSENQFS 212 (848)
Q Consensus 183 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 212 (848)
++|++++..+..|..+++|++|+|++|.+.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 555555433344555555555555555544
No 385
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.65 E-value=8.5e-17 Score=172.64 Aligned_cols=143 Identities=13% Similarity=0.114 Sum_probs=102.5
Q ss_pred cCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCc----------hhHHH--------HHHHHHHHhcCCCCc
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNM----------ADHDE--------FLNEVLALKEIRHRN 660 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~----------~~~~~--------~~~E~~~l~~l~hp~ 660 (848)
.-|.+...||+|+||.||+|...+|+.||||+++........ ..... ..+|...+.++.+++
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 348999999999999999999889999999997653221000 00111 234566666665444
Q ss_pred ccceEEEeecCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCC
Q 038003 661 NVKFHGFCYNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDS 740 (848)
Q Consensus 661 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~ 740 (848)
+....-+.. ...++||||++|+++.++... .....++.|++.++.+||+. |||||||||.|||+++
T Consensus 175 v~vp~p~~~--~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 175 FPVPEPIAQ--SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp CSCCCEEEE--ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCCCeeeec--cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 322211111 134799999999888765421 12356889999999999999 9999999999999987
Q ss_pred CC----------CEEEeeccCcccc
Q 038003 741 NF----------EAHVSDFGIAKFV 755 (848)
Q Consensus 741 ~~----------~~kl~DfG~~~~~ 755 (848)
++ .+.|+||+.+...
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCcccccccccceEEEEeCCcccC
Confidence 76 3899999988654
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=3.8e-16 Score=154.01 Aligned_cols=128 Identities=27% Similarity=0.343 Sum_probs=74.7
Q ss_pred cEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccC
Q 038003 388 QVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNN 467 (848)
Q Consensus 388 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 467 (848)
+++++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46677777766 4444332 45666666666665 44555666666666666666666555555666666666666666
Q ss_pred cCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccC
Q 038003 468 QLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSD 519 (848)
Q Consensus 468 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 519 (848)
+|++..|..|.++++|+.|+|++|+|+...+..|..+++|+.|+|++|++..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 6665555555555555555555555554444445555555555555555543
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=9.9e-16 Score=149.04 Aligned_cols=130 Identities=27% Similarity=0.296 Sum_probs=81.5
Q ss_pred cEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCC
Q 038003 82 ANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHN 161 (848)
Q Consensus 82 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 161 (848)
+.+++++|.++ .+|..+. ++|++|++++|++++..+..|+++++|++|+|++|++++..+..++.+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 45566666665 4554332 56777777777777655556677777777777777776555555666666666666666
Q ss_pred cCCCCCCCcccCccccceEEeecccccCCCccccccccccccccccccccccc
Q 038003 162 NLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGS 214 (848)
Q Consensus 162 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 214 (848)
++++..+..+.++++|++|++++|++++..+..+..+++|++|+|++|.+++.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 66655455556666666666666666644444455566666666666666543
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.63 E-value=4e-18 Score=169.36 Aligned_cols=137 Identities=20% Similarity=0.262 Sum_probs=87.7
Q ss_pred CCCCCCcEEeccCCcccccccc------cccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccC
Q 038003 76 SSFPHLANLNLSFNLFFGNIPL------QIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQ 149 (848)
Q Consensus 76 ~~l~~l~~L~l~~n~~~~~~p~------~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 149 (848)
...+.++.++++.+.++|.+|. .++.+++|++|+|++|++++ +| .+.++++|++|+|++|+++ .+|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3445566666666666666665 67777777777777777775 55 6777777777777777776 56666666
Q ss_pred cCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCc-ccccccccccccccccccccccCcc
Q 038003 150 LSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIP-SIIGKLKSLLQLDLSENQFSGSIPL 217 (848)
Q Consensus 150 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~ 217 (848)
+++|++|+|++|++++ +| .++.+++|++|++++|++++..+ ..+..+++|++|++++|.+++.+|.
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 6666666666666664 44 45666666666666666663222 3555666666666666666554443
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.60 E-value=1.1e-17 Score=166.04 Aligned_cols=135 Identities=22% Similarity=0.285 Sum_probs=90.0
Q ss_pred ccCCCCCcEEEccccCCCCCCch------hhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCccc
Q 038003 99 IGNLSKLQYLDLGSNQLSGLIPP------EIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLG 172 (848)
Q Consensus 99 ~~~l~~L~~L~Ls~n~l~~~~p~------~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~ 172 (848)
+.....++.++++.+.++|.+|. .++.+++|++|+|++|++++ +| .++.+++|++|+|++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45567778888888888887776 77788888888888888775 55 6677777777777777776 5666666
Q ss_pred CccccceEEeecccccCCCcccccccccccccccccccccccCc-ccccCCcccceeeccccCCCCC
Q 038003 173 NLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIP-LSLGNLSSLTMMSLFNNSLSGS 238 (848)
Q Consensus 173 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~~~ 238 (848)
.+++|++|++++|++++ +| .++.+++|++|+|++|++++..+ ..+..+++|++|++++|.+++.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 66677777777777764 34 46666666666666666663221 2455555555555555555443
No 390
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=9.3e-15 Score=160.92 Aligned_cols=201 Identities=10% Similarity=0.120 Sum_probs=112.4
Q ss_pred cccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCccccccccc
Q 038003 331 EAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSS 410 (848)
Q Consensus 331 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 410 (848)
.+|.++++|+.+++++|+++.....+|. ..+|+.+.+..+ +..+....|.++++|+.+++..| ++.+...+|.+ .+
T Consensus 174 ~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~ 249 (401)
T 4fdw_A 174 DIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SG 249 (401)
T ss_dssp STTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CC
T ss_pred HHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CC
Confidence 4455555555555555555554444444 245555555432 44344455556666666666543 34344444554 55
Q ss_pred ccEEEccCCcCCCCCCcccCCCCccCeEeccCcccC-----CCCCCcccCccccceeccccCcCCCCChhHHhhhcccce
Q 038003 411 LNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLS-----SSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSE 485 (848)
Q Consensus 411 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 485 (848)
|+.+.+ .+.++.....+|.++++|+.+++.+|.+. .+.+.+|.++++|+.++|. |.++.+....|.++.+|+.
T Consensus 250 L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~ 327 (401)
T 4fdw_A 250 ITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQ 327 (401)
T ss_dssp CSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCE
T ss_pred ccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccE
Confidence 666666 33344444556666666666666665543 3445566666666666666 3355555566666666666
Q ss_pred ecccCcccCcCCCccccCCCCCccccCCCCcccCCCcchhcccc-CceeecCCCC
Q 038003 486 LDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMR-SLSCIDISYN 539 (848)
Q Consensus 486 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~l~ls~N 539 (848)
++|..| ++......|.++ +|+.+++++|.+....+..|..++ .++.+++..|
T Consensus 328 l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~ 380 (401)
T 4fdw_A 328 LTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAE 380 (401)
T ss_dssp EEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGG
T ss_pred EEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHH
Confidence 666444 544455566666 666666666666655555565553 4555554443
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=2e-15 Score=146.75 Aligned_cols=131 Identities=19% Similarity=0.246 Sum_probs=64.6
Q ss_pred cCCCCCCcEEeccCCcccccccccccCCC-CCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCc
Q 038003 75 FSSFPHLANLNLSFNLFFGNIPLQIGNLS-KLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLI 153 (848)
Q Consensus 75 ~~~l~~l~~L~l~~n~~~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 153 (848)
+...++|+.|++++|.++ .+|. +..+. +|++|+|++|++++. +.|+.+++|++|+|++|++++..|..++.+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 344455555555555555 2332 33333 555555555555543 345555555555555555553322333555555
Q ss_pred cEEEcCCCcCCCCCCC--cccCccccceEEeecccccCCCccc----ccccccccccccccccc
Q 038003 154 DKLALCHNNLHGSIPS--SLGNLSNLAVLYLYKNSLSGSIPSI----IGKLKSLLQLDLSENQF 211 (848)
Q Consensus 154 ~~L~L~~n~l~~~~p~--~l~~l~~L~~L~l~~N~l~~~~p~~----~~~l~~L~~L~L~~N~l 211 (848)
++|+|++|+++ .+|. .++.+++|++|++++|.++ .+|.. ++.+++|++|++++|.+
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCH
Confidence 55555555553 3443 4445555555555555554 23332 44445555555554444
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=3.4e-15 Score=145.02 Aligned_cols=132 Identities=19% Similarity=0.211 Sum_probs=82.8
Q ss_pred ccccccccEEEccCCcCCCCCCcccCCCC-ccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCChhHHhhhccc
Q 038003 405 LEMLSSLNKLILNLNQLSGGVPLEFGSLT-KLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHL 483 (848)
Q Consensus 405 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 483 (848)
+..+++|+.|++++|+++. +|. +..+. +|++|++++|+|++. ..|+.+++|++|+|++|+|++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 3344455555555555552 232 33333 666666666666643 456666677777777777765555556777777
Q ss_pred ceecccCcccCcCCCc--cccCCCCCccccCCCCcccCCCcc----hhccccCceeecCCCCccC
Q 038003 484 SELDLSHNILQEEIPP--QVCNMGSLEKLNLSHNNLSDFIPR----CFEEMRSLSCIDISYNELH 542 (848)
Q Consensus 484 ~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~l~ls~N~l~ 542 (848)
++|+|++|+|+ .+|. .+..+++|+.|++++|+++. .|. .+..+++|+.+|+++|...
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777774 3444 66777777777777777765 344 3777788888888777664
No 393
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.55 E-value=2.5e-14 Score=157.47 Aligned_cols=89 Identities=10% Similarity=0.166 Sum_probs=45.8
Q ss_pred CcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCChhHHhhhcccceecccCcccCcCCCccccCCC
Q 038003 426 PLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMG 505 (848)
Q Consensus 426 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 505 (848)
+.+|.++++|+.++|. |.++.+...+|.++++|+.++|.+| ++.+.+.+|.++ +|+.+++++|.+....+..|..++
T Consensus 293 ~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~ 369 (401)
T 4fdw_A 293 PYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFP 369 (401)
T ss_dssp TTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSC
T ss_pred HHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCC
Confidence 3445555555555555 2344444455555555555555333 444444555555 555555555555444445555553
Q ss_pred -CCccccCCCCcc
Q 038003 506 -SLEKLNLSHNNL 517 (848)
Q Consensus 506 -~L~~L~Ls~N~l 517 (848)
+++.|++..|.+
T Consensus 370 ~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 370 DDITVIRVPAESV 382 (401)
T ss_dssp TTCCEEEECGGGH
T ss_pred CCccEEEeCHHHH
Confidence 555666555543
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.52 E-value=2.9e-13 Score=149.60 Aligned_cols=330 Identities=11% Similarity=0.023 Sum_probs=166.9
Q ss_pred CCccCCCCCCcEEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcC
Q 038003 72 DFSFSSFPHLANLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLS 151 (848)
Q Consensus 72 ~~~~~~l~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 151 (848)
+.+|.++.+|+.+.+..+ ++..-..+|.++++|+.++|.++ ++.+-..+|.++++|+.+.+..+ +...-...|....
T Consensus 64 ~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 334555666666666432 43223345556666666666543 33233345555555555544432 2212223333333
Q ss_pred CccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCcccceeecc
Q 038003 152 LIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLSSLTMMSLF 231 (848)
Q Consensus 152 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~ 231 (848)
.+.......... .-...|.++++|+.+.+.++. .+ .....|.++++|+.+.+.
T Consensus 141 ~~~~~~~~~~~~--i~~~aF~~c~~L~~i~l~~~~------------------------~~-I~~~~F~~c~~L~~i~l~ 193 (394)
T 4fs7_A 141 FKEITIPEGVTV--IGDEAFATCESLEYVSLPDSM------------------------ET-LHNGLFSGCGKLKSIKLP 193 (394)
T ss_dssp CSEEECCTTCCE--ECTTTTTTCTTCCEEECCTTC------------------------CE-ECTTTTTTCTTCCBCCCC
T ss_pred ccccccCccccc--cchhhhcccCCCcEEecCCcc------------------------ce-eccccccCCCCceEEEcC
Confidence 222222111111 112334444445554444332 11 223334444444444444
Q ss_pred ccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCcccccccccccccc
Q 038003 232 NNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELCTNLLRGVI 311 (848)
Q Consensus 232 ~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 311 (848)
.| ++......+.++..|+.+.+..+... +........+|+.+.+..+ +.......+..+..|+.+.+..+...
T Consensus 194 ~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~--- 266 (394)
T 4fs7_A 194 RN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR--- 266 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE---
T ss_pred CC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce---
Confidence 43 22122334444555555554444322 1122223345555555432 22223334455555555554433211
Q ss_pred CCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEE
Q 038003 312 PHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLD 391 (848)
Q Consensus 312 p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~ 391 (848)
+....|..+..++.+....+.+. ...|..+.+|+.+.+..+ +..+....|.++++|+.++
T Consensus 267 ----------------i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~ 326 (394)
T 4fs7_A 267 ----------------IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSID 326 (394)
T ss_dssp ----------------ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEEC
T ss_pred ----------------eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEE
Confidence 22234555555666555544322 334556666666666544 4434456677778888888
Q ss_pred ccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCcccccee
Q 038003 392 LSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYL 462 (848)
Q Consensus 392 Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 462 (848)
|..+ ++.+...+|.++++|+.+.+..| ++.....+|.++.+|+.+++..+ ++ .+..+|.++++|+.+
T Consensus 327 lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 327 LPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred eCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 8644 66556677888888888888766 66566778888888888888765 33 334678888888765
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.51 E-value=2.8e-13 Score=149.72 Aligned_cols=330 Identities=12% Similarity=0.035 Sum_probs=163.1
Q ss_pred CccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCcccccccccccccccccccccccCcccccCCc
Q 038003 144 PPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIPSIIGKLKSLLQLDLSENQFSGSIPLSLGNLS 223 (848)
Q Consensus 144 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 223 (848)
..+|.++++|+.+.|..+ ++..-..+|.++++|+.+++..+ ++......|.++.+|+.+.+..+ +.......|.++.
T Consensus 64 ~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 456777888888888643 55333456777788888877654 44333456677777777666543 3323333444443
Q ss_pred ccceeeccccCCCCCCCCcccCcccccccccccccccCcCCCcccCCCCCceEEccCccccccCcccccCCCCCcccccc
Q 038003 224 SLTMMSLFNNSLSGSIPPILGNLKSLSALGLHINQLNGFIPPSIGNLSSLRVLYLYNNGLYGFVPEEIGYLKSLSELELC 303 (848)
Q Consensus 224 ~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 303 (848)
.+.......... .....|.++++|+.+.+..+. ......+|.++.+|+.+++..| +.......
T Consensus 141 ~~~~~~~~~~~~--i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~------------- 203 (394)
T 4fs7_A 141 FKEITIPEGVTV--IGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYC------------- 203 (394)
T ss_dssp CSEEECCTTCCE--ECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTT-------------
T ss_pred ccccccCccccc--cchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchh-------------
Confidence 322222211111 112334444444444444332 1122334444444444444333 22222333
Q ss_pred ccccccccCCccceeeccccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCC
Q 038003 304 TNLLRGVIPHSIERVLLNQNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGN 383 (848)
Q Consensus 304 ~N~l~~~~p~~l~~l~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~ 383 (848)
|.++..|+.+.+..+... . ...+....+|+.+.+..+ +.......+..
T Consensus 204 -----------------------------F~~~~~L~~i~~~~~~~~-i-~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~ 251 (394)
T 4fs7_A 204 -----------------------------FAECILLENMEFPNSLYY-L-GDFALSKTGVKNIIIPDS-FTELGKSVFYG 251 (394)
T ss_dssp -----------------------------TTTCTTCCBCCCCTTCCE-E-CTTTTTTCCCCEEEECTT-CCEECSSTTTT
T ss_pred -----------------------------hccccccceeecCCCceE-e-ehhhcccCCCceEEECCC-ceecccccccc
Confidence 334444444443333211 0 111112233444443322 11122334555
Q ss_pred CCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceec
Q 038003 384 SPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLN 463 (848)
Q Consensus 384 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 463 (848)
+..|+.+.+..+... .....|..+..++.+....+.+. ...|....+|+.+.+..+ ++.+...+|.++.+|+.++
T Consensus 252 ~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~ 326 (394)
T 4fs7_A 252 CTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSID 326 (394)
T ss_dssp CSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEEC
T ss_pred cccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEE
Confidence 556666666555433 44445555566666655554432 334555666666666544 4444555666666666666
Q ss_pred cccCcCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccCCCcchhccccCceee
Q 038003 464 LSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCI 534 (848)
Q Consensus 464 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 534 (848)
|.++ ++.+...+|.++.+|+.+++..| ++.....+|.++.+|+.+++..+ ++. +..+|.++++|+.+
T Consensus 327 lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~~-~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 327 LPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LEQ-YRYDFEDTTKFKWI 393 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GGG-GGGGBCTTCEEEEE
T ss_pred eCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CEE-hhheecCCCCCcEE
Confidence 6533 55455556666666666666555 54444556666666666666543 222 23456666666543
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=1.5e-13 Score=132.34 Aligned_cols=103 Identities=29% Similarity=0.347 Sum_probs=69.6
Q ss_pred EeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcC
Q 038003 84 LNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNL 163 (848)
Q Consensus 84 L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l 163 (848)
+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|
T Consensus 14 l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 14 VDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp EECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 344444444 3555443 6677777777777776677777777777777777777755555667777777777777777
Q ss_pred CCCCCCcccCccccceEEeecccccC
Q 038003 164 HGSIPSSLGNLSNLAVLYLYKNSLSG 189 (848)
Q Consensus 164 ~~~~p~~l~~l~~L~~L~l~~N~l~~ 189 (848)
++..+..|.++++|++|+|++|.++.
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 75555567777777777777777764
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=1.2e-13 Score=133.50 Aligned_cols=103 Identities=27% Similarity=0.381 Sum_probs=76.9
Q ss_pred EEeccCCcccccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCc
Q 038003 83 NLNLSFNLFFGNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNN 162 (848)
Q Consensus 83 ~L~l~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 162 (848)
.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|+++++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4566666663 5676664 778888888888887777788888888888888888886555556778888888888888
Q ss_pred CCCCCCCcccCccccceEEeeccccc
Q 038003 163 LHGSIPSSLGNLSNLAVLYLYKNSLS 188 (848)
Q Consensus 163 l~~~~p~~l~~l~~L~~L~l~~N~l~ 188 (848)
|++..+..|.++++|++|+|++|.+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 87544455777888888888888777
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.1e-13 Score=133.33 Aligned_cols=105 Identities=29% Similarity=0.302 Sum_probs=54.3
Q ss_pred cEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCCCCChhHHhhhcccceecccCc
Q 038003 412 NKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHN 491 (848)
Q Consensus 412 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 491 (848)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 34444444444 2333321 44555555555555555555555555555555555555444444555555555555555
Q ss_pred ccCcCCCccccCCCCCccccCCCCcccC
Q 038003 492 ILQEEIPPQVCNMGSLEKLNLSHNNLSD 519 (848)
Q Consensus 492 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 519 (848)
+|++..+..|..+++|++|+|++|+++.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 5554444445555555555555555554
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=1.6e-13 Score=132.64 Aligned_cols=104 Identities=24% Similarity=0.323 Sum_probs=72.8
Q ss_pred cEEEccccCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecc
Q 038003 106 QYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKN 185 (848)
Q Consensus 106 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N 185 (848)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|+.+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67888888876 5666554 67778888887777766777777777777777777777544445567777777777777
Q ss_pred cccCCCccccccccccccccccccccc
Q 038003 186 SLSGSIPSIIGKLKSLLQLDLSENQFS 212 (848)
Q Consensus 186 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 212 (848)
++++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 777554455666666777777666666
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=1.3e-12 Score=141.90 Aligned_cols=92 Identities=23% Similarity=0.233 Sum_probs=57.5
Q ss_pred ccccccCCCCCcEEEccc-cCCCCCCchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccC
Q 038003 95 IPLQIGNLSKLQYLDLGS-NQLSGLIPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGN 173 (848)
Q Consensus 95 ~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 173 (848)
||. |+.+++|++|+|++ |.|++..|..|++|++|++|+|++|+|++..|..|+.|++|++|+|++|+|++..+..+..
T Consensus 24 ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 102 (347)
T 2ifg_A 24 LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG 102 (347)
T ss_dssp TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS
T ss_pred cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHccc
Confidence 555 66666666666664 6666655566666666666666666666666666666666666666666666433344444
Q ss_pred ccccceEEeeccccc
Q 038003 174 LSNLAVLYLYKNSLS 188 (848)
Q Consensus 174 l~~L~~L~l~~N~l~ 188 (848)
++ |+.|+|.+|.+.
T Consensus 103 ~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 103 LS-LQELVLSGNPLH 116 (347)
T ss_dssp CC-CCEEECCSSCCC
T ss_pred CC-ceEEEeeCCCcc
Confidence 44 777777777766
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.31 E-value=1.9e-14 Score=156.94 Aligned_cols=182 Identities=18% Similarity=0.178 Sum_probs=91.5
Q ss_pred CCCcEEEccccCCCCCCchhhhcc-----ccccEEEecccCcCCCCCccc-cCcCCccEEEcCCCcCCCCCCCcc-----
Q 038003 103 SKLQYLDLGSNQLSGLIPPEIGKL-----NQLRRLYLDMNQLHGTIPPEI-GQLSLIDKLALCHNNLHGSIPSSL----- 171 (848)
Q Consensus 103 ~~L~~L~Ls~n~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~p~~l----- 171 (848)
+.|++|+|++|.++......+..+ ++|++|+|++|.++......+ ..+++|++|+|++|.++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 445555555555554333333322 455555555555543222222 224455566666665543222222
Q ss_pred cCccccceEEeecccccCC----Cccccccccccccccccccccccc----CcccccCCcccceeeccccCCCCC----C
Q 038003 172 GNLSNLAVLYLYKNSLSGS----IPSIIGKLKSLLQLDLSENQFSGS----IPLSLGNLSSLTMMSLFNNSLSGS----I 239 (848)
Q Consensus 172 ~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~l~~n~l~~~----~ 239 (848)
...++|++|+|++|.++.. ++..+..+++|++|+|++|+++.. ++..+...++|+.|+|++|.|++. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 1235566666666666531 233345556666666666666532 234455566677777777776642 2
Q ss_pred CCcccCcccccccccccccccCcCCCcccCCC-----CCceEE--ccCcccc
Q 038003 240 PPILGNLKSLSALGLHINQLNGFIPPSIGNLS-----SLRVLY--LYNNGLY 284 (848)
Q Consensus 240 p~~l~~l~~L~~L~l~~N~l~~~~p~~l~~l~-----~L~~L~--Ls~N~l~ 284 (848)
+..+...++|++|+|++|.|+......+..+. .|+.+. +..|.+.
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 23344456677777777777654444443321 155555 5555554
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.31 E-value=5e-14 Score=153.52 Aligned_cols=165 Identities=19% Similarity=0.186 Sum_probs=78.2
Q ss_pred ccccEeecccccccCCCCCCCC-----CCCCccEEEccCCccCCCCcccc-cccccccEEEccCCcCCCCCCccc-----
Q 038003 361 SKLSTFIVSMNNISGSIPPDIG-----NSPKLQVLDLSSNHIVGKIPVQL-EMLSSLNKLILNLNQLSGGVPLEF----- 429 (848)
Q Consensus 361 ~~L~~L~l~~N~i~~~~p~~l~-----~l~~L~~L~Ls~N~l~~~~~~~l-~~l~~L~~L~L~~N~l~~~~~~~~----- 429 (848)
+.|+.|++++|.++......+. ..++|++|+|++|.|+......+ ..+++|+.|+|++|.|++.....+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 4566666666665532222211 12456666666666653322222 234556666666666553322222
Q ss_pred CCCCccCeEeccCcccCCC----CCCcccCccccceeccccCcCCCCC----hhHHhhhcccceecccCcccCcC----C
Q 038003 430 GSLTKLQYLDLSTNKLSSS----IPKSIGNLLKLHYLNLSNNQLSHKI----PTEFEKLIHLSELDLSHNILQEE----I 497 (848)
Q Consensus 430 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~----~ 497 (848)
...++|+.|+|++|.|+.. ++..+..+++|++|+|++|+|++.. +..+...++|++|+|++|.|++. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 1234556666666655431 2223344555555666665554322 23334445555555555555432 1
Q ss_pred CccccCCCCCccccCCCCcccCCCcchh
Q 038003 498 PPQVCNMGSLEKLNLSHNNLSDFIPRCF 525 (848)
Q Consensus 498 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 525 (848)
+..+...++|++|+|++|.|+......+
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 2223334555555555555554433333
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.29 E-value=9.9e-11 Score=129.18 Aligned_cols=132 Identities=9% Similarity=0.157 Sum_probs=66.8
Q ss_pred CCCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCcc
Q 038003 378 PPDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLL 457 (848)
Q Consensus 378 p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 457 (848)
...|..+++|+.+.+..+..+ ....+|.++++|+.+.+. +.++.....+|.++.+|+.+++..+ ++.+...+|.++.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 344555555666655544332 344455555666666654 3344344555666666666666543 4444455666666
Q ss_pred ccceeccccCcCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCc
Q 038003 458 KLHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNN 516 (848)
Q Consensus 458 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 516 (848)
+|+.+.+..+ ++.+...+|.++.+|+.+++.+|.... ..+....+|+.+.+..|.
T Consensus 335 ~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 335 QLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp TCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC---------
T ss_pred CCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCC
Confidence 6666666443 554555566666666666666654421 344555556665555443
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.24 E-value=1.9e-11 Score=132.51 Aligned_cols=130 Identities=22% Similarity=0.157 Sum_probs=93.0
Q ss_pred eecccc-cccCCCCCCCCCCCCccEEEccC-CccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCc
Q 038003 366 FIVSMN-NISGSIPPDIGNSPKLQVLDLSS-NHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTN 443 (848)
Q Consensus 366 L~l~~N-~i~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 443 (848)
++++++ .++ .+|. +..+++|+.|+|++ |+|++..+..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 344444 455 4667 88888888888885 8888777788888888888888888888888888888888888888888
Q ss_pred ccCCCCCCcccCccccceeccccCcCCCCCh-hHHhhhcccceecccCcccCcCCC
Q 038003 444 KLSSSIPKSIGNLLKLHYLNLSNNQLSHKIP-TEFEKLIHLSELDLSHNILQEEIP 498 (848)
Q Consensus 444 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p 498 (848)
+|++..+..|..++ |+.|+|++|.|...-. .+|..+.......+..+.++-..|
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~ 145 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQ 145 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSS
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCC
Confidence 88877666676666 8888888888874322 344444433444444444443333
No 405
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=2.5e-11 Score=126.02 Aligned_cols=145 Identities=14% Similarity=0.048 Sum_probs=112.7
Q ss_pred hhcCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC-CCcccceEEEeecCCeeE
Q 038003 597 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-HRNNVKFHGFCYNGPHSF 675 (848)
Q Consensus 597 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~ 675 (848)
.-..|++...++.|+.+.||++... +..+++|+...... .....+.+|+++++.+. +..+.++++++.+.+..|
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~----~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK----GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT----TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC----CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 3456888888999999999999764 68899999865321 11234788999998884 677889999999888999
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCC---------------------------------
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC--------------------------------- 722 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~--------------------------------- 722 (848)
+||||++|.++.+.+... .....++.++++++..||+..
T Consensus 87 lv~e~i~G~~l~~~~~~~--------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYEDE--------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EEEECCSSEEHHHHCCTT--------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred EEEEecCCeehhhccCCc--------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 999999999998764211 123468899999999999810
Q ss_pred -----------------------CCCeEEcCCCCCCeeeCCCCCEEEeeccCccc
Q 038003 723 -----------------------LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754 (848)
Q Consensus 723 -----------------------~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~ 754 (848)
.+.++|||++|.||+++++..+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13689999999999998766667999987753
No 406
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.20 E-value=3.6e-10 Score=124.66 Aligned_cols=138 Identities=13% Similarity=0.126 Sum_probs=95.8
Q ss_pred CCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccccccCCCCCCCCCCCCccEEEccCCccCCCCcccc
Q 038003 326 SGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMNNISGSIPPDIGNSPKLQVLDLSSNHIVGKIPVQL 405 (848)
Q Consensus 326 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l 405 (848)
+.+...+|..+..|+.+.+.++. ......+|.+++.|+.+.+. +.+.......|.++++|+.++|..+ ++.+...+|
T Consensus 254 ~~i~~~aF~~c~~L~~i~lp~~~-~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF 330 (394)
T 4gt6_A 254 ARIETHAFDSCAYLASVKMPDSV-VSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAF 330 (394)
T ss_dssp EEECTTTTTTCSSCCEEECCTTC-CEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTT
T ss_pred eEcccceeeecccccEEeccccc-ceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHh
Confidence 34455678888888888887654 34566778888888888885 4455455667888899999999765 665667789
Q ss_pred cccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccccceeccccCcCC
Q 038003 406 EMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQLS 470 (848)
Q Consensus 406 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 470 (848)
.++++|+.+.+..+ ++.....+|.++++|+.+++.+|.... ..+....+|+.+.+..|.+.
T Consensus 331 ~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 331 AGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp TTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred hCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 99999999999755 666777889999999999999886541 45677788988888877653
No 407
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.10 E-value=6e-13 Score=136.09 Aligned_cols=149 Identities=16% Similarity=0.128 Sum_probs=70.9
Q ss_pred CCCccCceEEcCCCCceEEEeccc---cCccccccCCccCCCCCCcEEeccCCcccccccc-cccCCCCCcE--EEcccc
Q 038003 40 SPCSWFGISCNHAGSRVISITMST---LGLNGTFHDFSFSSFPHLANLNLSFNLFFGNIPL-QIGNLSKLQY--LDLGSN 113 (848)
Q Consensus 40 ~~c~w~gv~C~~~~~~v~~l~l~~---~~l~g~~~~~~~~~l~~l~~L~l~~n~~~~~~p~-~~~~l~~L~~--L~Ls~n 113 (848)
..|.|.|+.|+..+.+|+.+...+ .++.|.+.+..+..++. .|...+|..++.++- .+...+.|+. ++++.|
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 468899999997766776665544 33444443222111111 112222222222221 1333444444 455555
Q ss_pred CCC---CCCchhhhccccccEEEecccCcCC--CCCccccCcCCccEEEcCCCcCCCCCCCcccCcc--ccceEEeeccc
Q 038003 114 QLS---GLIPPEIGKLNQLRRLYLDMNQLHG--TIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLS--NLAVLYLYKNS 186 (848)
Q Consensus 114 ~l~---~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~--~L~~L~l~~N~ 186 (848)
... +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.
T Consensus 154 ~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Np 231 (267)
T 3rw6_A 154 RRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNS 231 (267)
T ss_dssp SHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTST
T ss_pred HHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCc
Confidence 322 1112122445666666666666665 3344445555555555555555532 2223333 55555555555
Q ss_pred ccCCCc
Q 038003 187 LSGSIP 192 (848)
Q Consensus 187 l~~~~p 192 (848)
+++.+|
T Consensus 232 l~~~~~ 237 (267)
T 3rw6_A 232 LCDTFR 237 (267)
T ss_dssp TGGGCS
T ss_pred CccccC
Confidence 554443
No 408
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.09 E-value=1.3e-10 Score=120.34 Aligned_cols=138 Identities=14% Similarity=0.094 Sum_probs=101.0
Q ss_pred cCCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCc--ccceEEEeecCCeeEE
Q 038003 599 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN--NVKFHGFCYNGPHSFL 676 (848)
Q Consensus 599 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~~~~~~~~~l 676 (848)
..+.+....+.|..+.||++...+|..+++|+.... ....+.+|+++++.+.+.. +.+++++...++..++
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~ 92 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWL 92 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEE
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEE
Confidence 344443333466779999998777888999996543 1234678899888885444 5568888888788999
Q ss_pred EEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCC----------------------------------
Q 038003 677 VCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC---------------------------------- 722 (848)
Q Consensus 677 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~---------------------------------- 722 (848)
||||++|.++. ... .. ...++.++++.+..||+..
T Consensus 93 v~e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
T 1nd4_A 93 LLGEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEE 161 (264)
T ss_dssp EEECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGG
T ss_pred EEEecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhh
Confidence 99999998873 211 11 2357788888888888752
Q ss_pred ---------------------CCCeEEcCCCCCCeeeCCCCCEEEeeccCccc
Q 038003 723 ---------------------LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754 (848)
Q Consensus 723 ---------------------~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~ 754 (848)
..+++|||++|.||++++++.+.|+|||.+..
T Consensus 162 ~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 162 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp GTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998776677999998754
No 409
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.00 E-value=1e-09 Score=119.37 Aligned_cols=143 Identities=15% Similarity=0.227 Sum_probs=106.3
Q ss_pred ccceeccCCceeEEEEEcCCCCEEEEEEcc--cccccCCchhHHHHHHHHHHHhcCC--CCcccceEEEeecC---CeeE
Q 038003 603 EKFCIGKGGQGSVYKAELPSGDIVAVKKFN--SQLLSGNMADHDEFLNEVLALKEIR--HRNNVKFHGFCYNG---PHSF 675 (848)
Q Consensus 603 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~l~~~~~~~---~~~~ 675 (848)
..+.++.|.++.||++... +..+++|+.. .... ......+.+|+++++.+. +..+++++.++.+. +..|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~---~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKL---LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC-------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCC---CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 3567999999999999876 4678899875 3211 122346778999999886 44578899988776 4589
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCC---------------------------------
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC--------------------------------- 722 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~--------------------------------- 722 (848)
+||||++|..+.+.. ...++..++..++.+++++|..||+..
T Consensus 118 ~vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EEEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 999999997764321 134667788899999999999999731
Q ss_pred ----------------------CCCeEEcCCCCCCeeeCCCCC--EEEeeccCccc
Q 038003 723 ----------------------LPSIIHRDISSKNVLLDSNFE--AHVSDFGIAKF 754 (848)
Q Consensus 723 ----------------------~~~ivH~Dlk~~NIll~~~~~--~kl~DfG~~~~ 754 (848)
.+.+||||+++.||+++.++. +.|+||+.+..
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999998864
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.99 E-value=5.6e-11 Score=128.23 Aligned_cols=62 Identities=21% Similarity=0.288 Sum_probs=29.6
Q ss_pred CchhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCccc--CccccceEEee
Q 038003 119 IPPEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLG--NLSNLAVLYLY 183 (848)
Q Consensus 119 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~--~l~~L~~L~l~ 183 (848)
++..+..+++|+.|+|++|.-. .+|. + .+++|++|+|..|.+.......++ .+++|++|+|+
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred HHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 3444555666666666655211 1222 2 245556666655554422222222 45566666654
No 411
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.96 E-value=1.3e-08 Score=111.53 Aligned_cols=146 Identities=13% Similarity=0.135 Sum_probs=83.5
Q ss_pred CCCCCCCCccEEEccCCccCCCCcccccccccccEEEccCCcCCCCCCcccCCCCccCeEeccCcccCCCCCCcccCccc
Q 038003 379 PDIGNSPKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQLSGGVPLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLK 458 (848)
Q Consensus 379 ~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 458 (848)
..+....+|+.+.+..+ ++......+.++..|+.+.+..+ ++.....+|.+..+|+.+.+..+ ++.+....|.++.+
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 34445556666666543 33244445566666666666554 44344555666666666666543 44344456666666
Q ss_pred cceeccccCcCCCCChhHHhhhcccceecccCcccCcCCCccccCCCCCccccCCCCcccCCCcchhcccc
Q 038003 459 LHYLNLSNNQLSHKIPTEFEKLIHLSELDLSHNILQEEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMR 529 (848)
Q Consensus 459 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 529 (848)
|+.+.+.++.++.+....|.++.+|+.++|..+ ++.....+|.++.+|+.+.+..+ ++.+...+|.++.
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 666666666666555566666666666666543 44444456666666666666543 4444455565543
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.95 E-value=1.4e-10 Score=125.15 Aligned_cols=161 Identities=16% Similarity=0.200 Sum_probs=86.6
Q ss_pred hhhccccccEEEecccCcC---------CCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEeecccccCCCc
Q 038003 122 EIGKLNQLRRLYLDMNQLH---------GTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLYKNSLSGSIP 192 (848)
Q Consensus 122 ~~~~l~~L~~L~L~~n~l~---------~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p 192 (848)
++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.++....
T Consensus 134 s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l 210 (362)
T 2ra8_A 134 NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVV 210 (362)
T ss_dssp THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHH
T ss_pred hhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHH
Confidence 3455667777766554321 134455667788888888777311 2333 33 6788888888777654333
Q ss_pred cccc--cccccccccccc--cccccc-----Ccccc--cCCcccceeeccccCCCCCCCCccc---Cccccccccccccc
Q 038003 193 SIIG--KLKSLLQLDLSE--NQFSGS-----IPLSL--GNLSSLTMMSLFNNSLSGSIPPILG---NLKSLSALGLHINQ 258 (848)
Q Consensus 193 ~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~l--~~l~~L~~L~l~~n~l~~~~p~~l~---~l~~L~~L~l~~N~ 258 (848)
..++ .+++|++|+|+. |...+. +...+ ..+++|++|+|.+|.+.+..+..+. .+++|++|+|+.|+
T Consensus 211 ~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~ 290 (362)
T 2ra8_A 211 EDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGV 290 (362)
T ss_dssp HHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSC
T ss_pred HHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCC
Confidence 3343 577788887753 221111 01112 2356666666666666533222221 35566666666666
Q ss_pred ccCc----CCCcccCCCCCceEEccCccccc
Q 038003 259 LNGF----IPPSIGNLSSLRVLYLYNNGLYG 285 (848)
Q Consensus 259 l~~~----~p~~l~~l~~L~~L~Ls~N~l~~ 285 (848)
+.+. ++..+..+++|+.|+|++|.++.
T Consensus 291 L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 291 LTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp CBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 5542 22223344566666666665543
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.94 E-value=2.4e-08 Score=109.38 Aligned_cols=60 Identities=5% Similarity=0.055 Sum_probs=35.5
Q ss_pred hhhhccccccEEEecccCcCCCCCccccCcCCccEEEcCCCcCCCCCCCcccCccccceEEee
Q 038003 121 PEIGKLNQLRRLYLDMNQLHGTIPPEIGQLSLIDKLALCHNNLHGSIPSSLGNLSNLAVLYLY 183 (848)
Q Consensus 121 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 183 (848)
+.+....+|+.+.+.. .++..-..+|.++.+|+.+.|..+ ++..-...|.+. +|+.+.+.
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~ 99 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGM 99 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEEC
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECC
Confidence 3566777888888864 345334456777777777777543 442223455554 45555554
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.88 E-value=1.9e-09 Score=114.33 Aligned_cols=182 Identities=22% Similarity=0.204 Sum_probs=122.1
Q ss_pred cceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcC-CCCc--ccceEEEeecCC---eeEEE
Q 038003 604 KFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEI-RHRN--NVKFHGFCYNGP---HSFLV 677 (848)
Q Consensus 604 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~--iv~l~~~~~~~~---~~~lV 677 (848)
.+.++.|.+..||++. ..+++|+.... .....+.+|.++++.+ .+.. +.+++....... ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 4568999999999874 45889985432 3456788999999887 3333 345555543333 34899
Q ss_pred EeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCC-----------------------------------
Q 038003 678 CEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC----------------------------------- 722 (848)
Q Consensus 678 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~----------------------------------- 722 (848)
||+++|.++.+... ..++..++..++.|+++.+..||+..
T Consensus 95 m~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp EECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred EcccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 99999987764321 23566777788888888888888611
Q ss_pred --------------------CCCeEEcCCCCCCeeeCC--CCCEEEeeccCccccCCCCCCcccccccccc---cCc---
Q 038003 723 --------------------LPSIIHRDISSKNVLLDS--NFEAHVSDFGIAKFVGPHSSNWTEFAGTFGY---AAP--- 774 (848)
Q Consensus 723 --------------------~~~ivH~Dlk~~NIll~~--~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y---~aP--- 774 (848)
.+.+||+|++|.||++++ ...+.++||+.+..-.+. .+......+ ..|
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~----~Dl~~~~~~~~~~~~~~~ 245 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD----NDFISLMEDDEEYGMEFV 245 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT----HHHHTTCCTTTSCCHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH----HHHHHHHhhccccCHHHH
Confidence 135899999999999998 456889999998754321 111011111 122
Q ss_pred -------------cccccCCCCccchhhhHHHHHHHHHhCCCCCc
Q 038003 775 -------------EIAYTMRATEKYDVYSFGVLVFEVIKGNHPRD 806 (848)
Q Consensus 775 -------------E~~~~~~~~~~~DiwSlG~il~elltg~~P~~ 806 (848)
+.... .....+.|++|.++|.+.+|+.||-
T Consensus 246 ~~~l~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 246 SKILNHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHHHHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 22111 1122589999999999999998853
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.68 E-value=7.1e-08 Score=102.86 Aligned_cols=185 Identities=15% Similarity=0.135 Sum_probs=119.9
Q ss_pred CCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCC---C-cccceEEEeecCCeeE
Q 038003 600 DFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRH---R-NNVKFHGFCYNGPHSF 675 (848)
Q Consensus 600 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---p-~iv~l~~~~~~~~~~~ 675 (848)
.+...+.++.|....||++ ++.+++|+.... .....+.+|.++++.+.+ + .+.+++++ +..+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~------~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~ 103 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD------SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRF 103 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH------HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH------HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcE
Confidence 4566778999999999998 667899975332 224567899998888865 2 23455554 5678
Q ss_pred EEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCC--------------------------------
Q 038003 676 LVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCL-------------------------------- 723 (848)
Q Consensus 676 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~-------------------------------- 723 (848)
+||||++|.++.+..- ..++..++..++.++++.+..||+...
T Consensus 104 lvme~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 104 NIMKYIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp EEEECCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 9999999988763321 234556667788888888888885422
Q ss_pred ----------------------------CCeEEcCCCCCCeeeCCCCCEEEeeccCccccCCCCCCcccccccccccCcc
Q 038003 724 ----------------------------PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPE 775 (848)
Q Consensus 724 ----------------------------~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE 775 (848)
+.+||+|++|.||+++.+..+.|+||+.+....+................||
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 258 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCLLDCSTDDFGKE 258 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECGGGGGHHHHSCCTTSCCHH
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCHHHHHHHHHHhcccccCHH
Confidence 2459999999999999866679999999865432111111111111112333
Q ss_pred ccc----cCC------CCccchhhhHHHHHHHHHhCCC
Q 038003 776 IAY----TMR------ATEKYDVYSFGVLVFEVIKGNH 803 (848)
Q Consensus 776 ~~~----~~~------~~~~~DiwSlG~il~elltg~~ 803 (848)
... ... .....+.|..-..+++++.|..
T Consensus 259 ~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 296 (320)
T 3r70_A 259 FGRKVLKYYQHKAPEVAERKAELNDVYWSIDQIIYGYE 296 (320)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHTHHHHHHHSSCT
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 321 100 1235677766666888888754
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.64 E-value=4.7e-09 Score=107.25 Aligned_cols=113 Identities=20% Similarity=0.256 Sum_probs=84.9
Q ss_pred cccccCCccCCCCCCcE--EeccCCc---ccccccccccCCCCCcEEEccccCCCC--CCchhhhccccccEEEecccCc
Q 038003 67 NGTFHDFSFSSFPHLAN--LNLSFNL---FFGNIPLQIGNLSKLQYLDLGSNQLSG--LIPPEIGKLNQLRRLYLDMNQL 139 (848)
Q Consensus 67 ~g~~~~~~~~~l~~l~~--L~l~~n~---~~~~~p~~~~~l~~L~~L~Ls~n~l~~--~~p~~~~~l~~L~~L~L~~n~l 139 (848)
++.++-..|...+.|.. ++++.|. +.+.++....++++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|
T Consensus 129 ~~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i 208 (267)
T 3rw6_A 129 QQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNEL 208 (267)
T ss_dssp TTEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCC
T ss_pred ccccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCcc
Confidence 33444334566667776 7778884 334444444678999999999999998 4567889999999999999999
Q ss_pred CCCCCccccCcC--CccEEEcCCCcCCCCCCC-------cccCccccceEE
Q 038003 140 HGTIPPEIGQLS--LIDKLALCHNNLHGSIPS-------SLGNLSNLAVLY 181 (848)
Q Consensus 140 ~~~~p~~~~~l~--~L~~L~L~~n~l~~~~p~-------~l~~l~~L~~L~ 181 (848)
++. ..+..++ +|++|+|++|.+.+.+|+ .+..+++|+.||
T Consensus 209 ~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 209 KSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp CSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred CCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 965 4455555 999999999999987764 255677777765
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.47 E-value=1.7e-08 Score=98.08 Aligned_cols=89 Identities=10% Similarity=0.150 Sum_probs=52.9
Q ss_pred cCccccceeccccCcCCCC----ChhHHhhhcccceecccCcccCcC----CCccccCCCCCccccC--CCCcccCCC--
Q 038003 454 GNLLKLHYLNLSNNQLSHK----IPTEFEKLIHLSELDLSHNILQEE----IPPQVCNMGSLEKLNL--SHNNLSDFI-- 521 (848)
Q Consensus 454 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--s~N~l~~~~-- 521 (848)
...++|++|+|++|+|+.. +...+...+.|++|+|++|.|++. +...+...++|++|+| ++|.|+...
T Consensus 62 ~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~ 141 (185)
T 1io0_A 62 KTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEM 141 (185)
T ss_dssp TTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHH
T ss_pred HhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHH
Confidence 3344555555555555432 223334445666666666666542 2345566677888888 777776543
Q ss_pred --cchhccccCceeecCCCCccC
Q 038003 522 --PRCFEEMRSLSCIDISYNELH 542 (848)
Q Consensus 522 --~~~~~~l~~L~~l~ls~N~l~ 542 (848)
...+...++|+.|++++|.+.
T Consensus 142 ~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 142 EIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCcCEEeccCCCCC
Confidence 334455678888888888774
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.44 E-value=1.6e-08 Score=98.38 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=40.4
Q ss_pred CCCCCCccEEEccCC-ccCCC----CcccccccccccEEEccCCcCCCCC----CcccCCCCccCeEeccCcccCCC---
Q 038003 381 IGNSPKLQVLDLSSN-HIVGK----IPVQLEMLSSLNKLILNLNQLSGGV----PLEFGSLTKLQYLDLSTNKLSSS--- 448 (848)
Q Consensus 381 l~~l~~L~~L~Ls~N-~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~--- 448 (848)
+...++|++|+|++| .|... +...+...++|++|+|++|.|.... ...+...++|++|+|++|.|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 334556666666666 55522 2233334455555555555554211 11222234455555555554422
Q ss_pred -CCCcccCccccceecc--ccCcCC
Q 038003 449 -IPKSIGNLLKLHYLNL--SNNQLS 470 (848)
Q Consensus 449 -~p~~~~~l~~L~~L~L--s~N~l~ 470 (848)
+...+...+.|++|+| ++|.|+
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHhCCCceEEEecCCCCCCC
Confidence 1223333344444444 444444
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.35 E-value=2.1e-06 Score=90.72 Aligned_cols=137 Identities=17% Similarity=0.101 Sum_probs=94.3
Q ss_pred cceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCC---cccceEEEee-cCCeeEEEEe
Q 038003 604 KFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR---NNVKFHGFCY-NGPHSFLVCE 679 (848)
Q Consensus 604 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp---~iv~l~~~~~-~~~~~~lV~e 679 (848)
.+.++.|....||++ +..+++|+... ......+.+|.++++.+.+. .+.+++.+.. ..+..++|||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~------~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS------QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS------HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC------chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 456899999999998 56688888422 23456788999999998652 3556666664 4456789999
Q ss_pred ccCCCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhC--------------------------------------
Q 038003 680 YLDRGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHD-------------------------------------- 721 (848)
Q Consensus 680 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~-------------------------------------- 721 (848)
|++|..+.+..- ..++..+...++.++++.+..||+.
T Consensus 94 ~i~G~~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 94 KVQGQILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CCCSEECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred ccCCeECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 999987765321 1123344444555555555555532
Q ss_pred -------------------CCCCeEEcCCCCCCeeeCC---CCC-EEEeeccCcccc
Q 038003 722 -------------------CLPSIIHRDISSKNVLLDS---NFE-AHVSDFGIAKFV 755 (848)
Q Consensus 722 -------------------~~~~ivH~Dlk~~NIll~~---~~~-~kl~DfG~~~~~ 755 (848)
..+.+||+|++|.||+++. ++. +.|+||+.+..-
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2235799999999999987 455 489999988754
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.32 E-value=1.4e-06 Score=90.96 Aligned_cols=77 Identities=21% Similarity=0.223 Sum_probs=60.3
Q ss_pred cccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCC---cccceEEEeecCCeeEEEE
Q 038003 602 DEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR---NNVKFHGFCYNGPHSFLVC 678 (848)
Q Consensus 602 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp---~iv~l~~~~~~~~~~~lV~ 678 (848)
...+.|+.|.++.||++...+|+.+++|+.... .......+.+|++.++.+.+. .+++++++. ..++||
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~----~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm 89 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDD----APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTT----CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCC----CcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence 345689999999999998888999999996432 122345688999999999765 577787763 368999
Q ss_pred eccCCCCH
Q 038003 679 EYLDRGSL 686 (848)
Q Consensus 679 e~~~~gsL 686 (848)
||++|+.+
T Consensus 90 e~l~g~~~ 97 (288)
T 3d1u_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EecccCCC
Confidence 99999864
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.25 E-value=4.4e-06 Score=86.53 Aligned_cols=135 Identities=16% Similarity=0.160 Sum_probs=95.5
Q ss_pred eeccCCce-eEEEEEcC-CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC-CCcccceEEEeecCCeeEEEEeccC
Q 038003 606 CIGKGGQG-SVYKAELP-SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-HRNNVKFHGFCYNGPHSFLVCEYLD 682 (848)
Q Consensus 606 ~lg~G~~g-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lV~e~~~ 682 (848)
.+..|..| .||+.... ++..+++|+-... ....+.+|.+.++.+. +--+.+++.++.+.+..++|||+++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~ 103 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS-------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIP 103 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH-------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC-------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeC
Confidence 45566666 68998665 4667999985432 3456788999888774 2236788999999999999999999
Q ss_pred CCCHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCC----------------------------------------
Q 038003 683 RGSLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDC---------------------------------------- 722 (848)
Q Consensus 683 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~---------------------------------------- 722 (848)
|.++.+..... ......+..+++..+.-||...
T Consensus 104 G~~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 104 GKTAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp SEEHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred CccccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 98877654321 1122345556666666666421
Q ss_pred ---------------CCCeEEcCCCCCCeeeCCCCCEEEeeccCccc
Q 038003 723 ---------------LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754 (848)
Q Consensus 723 ---------------~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~ 754 (848)
.+.+||||+.+.||++++++.+-|+||+.+..
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11369999999999999877778999998764
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.17 E-value=6.5e-06 Score=88.93 Aligned_cols=145 Identities=12% Similarity=0.212 Sum_probs=90.8
Q ss_pred CcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCc--ccceEEEeecC-CeeEEE
Q 038003 601 FDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN--NVKFHGFCYNG-PHSFLV 677 (848)
Q Consensus 601 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~~~~~-~~~~lV 677 (848)
....+.++.|....+|++.. ++..+++|+.... ..+.+|..+++.+.... +.+++.++... +..|+|
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~---------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv 112 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA---------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI 112 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC---------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch---------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence 33456789999999999975 5788999986332 24778888888886543 45677776654 578999
Q ss_pred EeccCCCCHHhH------------------hcCC-CCc----c---------cCCHHHH---------------------
Q 038003 678 CEYLDRGSLARI------------------LGDD-VTA----K---------ELGWNRR--------------------- 704 (848)
Q Consensus 678 ~e~~~~gsL~~~------------------l~~~-~~~----~---------~l~~~~~--------------------- 704 (848)
|||++|.++.+. ++.. ... . .-.|...
T Consensus 113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~ 192 (362)
T 3ovc_A 113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS 192 (362)
T ss_dssp EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999998655321 0100 000 0 0001100
Q ss_pred HHHHHHHHHHHHHHhhCC-CCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 705 INVIKGVANALSYLHHDC-LPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 705 ~~i~~qia~~L~~LH~~~-~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
......+.....++.... .+.+||+|+.+.||++++++.+.|+||+.+..-
T Consensus 193 ~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 193 ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred ccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 011122222233332210 146899999999999987777889999988654
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.11 E-value=2.8e-06 Score=91.91 Aligned_cols=83 Identities=5% Similarity=-0.019 Sum_probs=55.4
Q ss_pred ccee-ccCCceeEEEEEcC-------CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC-C--CcccceEEEeecC-
Q 038003 604 KFCI-GKGGQGSVYKAELP-------SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-H--RNNVKFHGFCYNG- 671 (848)
Q Consensus 604 ~~~l-g~G~~g~V~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--p~iv~l~~~~~~~- 671 (848)
.+.| +.|....+|++... ++..+++|+....... .......+.+|+++++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~-~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDV-PVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGC-CSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCcc-ccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 4567 89999999998654 2667899986543200 0001134667888888773 2 3467788877655
Q ss_pred --CeeEEEEeccCCCCHH
Q 038003 672 --PHSFLVCEYLDRGSLA 687 (848)
Q Consensus 672 --~~~~lV~e~~~~gsL~ 687 (848)
+..++||||++|..+.
T Consensus 104 ~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TTSSCEEEEECCCCBCCC
T ss_pred ccCCceEEEEecCCCChh
Confidence 3568999999987654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.91 E-value=2.8e-05 Score=85.33 Aligned_cols=79 Identities=16% Similarity=0.016 Sum_probs=49.9
Q ss_pred cceeccCCceeEEEEEcC-CCCEEEEEEcccccc-cC-C-chhHHHHHHHHHHHhcCCC--Cc-ccceEEEeecCCeeEE
Q 038003 604 KFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLL-SG-N-MADHDEFLNEVLALKEIRH--RN-NVKFHGFCYNGPHSFL 676 (848)
Q Consensus 604 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~-~-~~~~~~~~~E~~~l~~l~h--p~-iv~l~~~~~~~~~~~l 676 (848)
.+.+|.|.++.||++... +++.+++|....... .. . ....+++..|.++++.+.. |. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457999999999999754 468899998654321 00 0 1123456778888887732 33 4456544 3445689
Q ss_pred EEeccCCC
Q 038003 677 VCEYLDRG 684 (848)
Q Consensus 677 V~e~~~~g 684 (848)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 425
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.84 E-value=9.3e-05 Score=77.70 Aligned_cols=139 Identities=18% Similarity=0.136 Sum_probs=91.8
Q ss_pred ccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC---CCcccceEEEeecCCeeEEEEe
Q 038003 603 EKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR---HRNNVKFHGFCYNGPHSFLVCE 679 (848)
Q Consensus 603 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hp~iv~l~~~~~~~~~~~lV~e 679 (848)
..+.|+.|.+..+|++.. ++..+++|+.... ....+.+|.+.++.+. ...+++++.+....+..++|||
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme 111 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS-------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLE 111 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG-------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEE
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc-------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEE
Confidence 346799999999999986 4678899986432 3566888999888873 3568889998888888999999
Q ss_pred ccCCCCHH--------h---HhcCCCC-------------------cccCCHHHHH---HHH----------------HH
Q 038003 680 YLDRGSLA--------R---ILGDDVT-------------------AKELGWNRRI---NVI----------------KG 710 (848)
Q Consensus 680 ~~~~gsL~--------~---~l~~~~~-------------------~~~l~~~~~~---~i~----------------~q 710 (848)
|++|..+. + .++.... .-.-+|.+.. ++. .+
T Consensus 112 ~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~ 191 (312)
T 3jr1_A 112 ALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDL 191 (312)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHH
T ss_pred eccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence 99987541 1 1111100 0012343321 111 11
Q ss_pred HH-HHHHHHhh-CCCCCeEEcCCCCCCeeeCCCCCEEEeecc
Q 038003 711 VA-NALSYLHH-DCLPSIIHRDISSKNVLLDSNFEAHVSDFG 750 (848)
Q Consensus 711 ia-~~L~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 750 (848)
++ .....|.. ...+.+||+|+.+.|++++.++ +.|+|++
T Consensus 192 l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 192 IVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11 11223432 2245899999999999999887 8999984
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.83 E-value=8.2e-05 Score=79.71 Aligned_cols=141 Identities=19% Similarity=0.260 Sum_probs=79.3
Q ss_pred ceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC-----CCcccceE-E--EeecCCeeEE
Q 038003 605 FCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-----HRNNVKFH-G--FCYNGPHSFL 676 (848)
Q Consensus 605 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----hp~iv~l~-~--~~~~~~~~~l 676 (848)
+.|+.|..+.||++...+| .+++|+.... .+.+..|.++++.+. .|.++... + +....+..++
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~--------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~ 108 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP--------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFV 108 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC--------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC--------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEE
Confidence 4567788999999977655 4899987542 123334555544442 34433311 1 1234567899
Q ss_pred EEeccCCCCHH-----------h---Hhc---CCCC-c-------ccCCHHH----------------------------
Q 038003 677 VCEYLDRGSLA-----------R---ILG---DDVT-A-------KELGWNR---------------------------- 703 (848)
Q Consensus 677 V~e~~~~gsL~-----------~---~l~---~~~~-~-------~~l~~~~---------------------------- 703 (848)
||||++|..+. + .++ .... . ....|..
T Consensus 109 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 188 (346)
T 2q83_A 109 VYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLY 188 (346)
T ss_dssp EEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred EEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHH
Confidence 99999986432 0 011 1110 0 0012211
Q ss_pred ---HHHHHHHHHHHHHHHhh----------CCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccc
Q 038003 704 ---RINVIKGVANALSYLHH----------DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754 (848)
Q Consensus 704 ---~~~i~~qia~~L~~LH~----------~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~ 754 (848)
...+..++..++.+|+. ....++||||+++.||+++.++.+.++||+.+..
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 189 LQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 01112234456666653 0134899999999999998888999999998864
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.83 E-value=3.6e-06 Score=79.54 Aligned_cols=87 Identities=14% Similarity=0.130 Sum_probs=56.9
Q ss_pred CccCeEeccCcccCCCCCCcccCccccceeccccCc-CCCCChhHHhhh----cccceecccCcc-cCcCCCccccCCCC
Q 038003 433 TKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNLSNNQ-LSHKIPTEFEKL----IHLSELDLSHNI-LQEEIPPQVCNMGS 506 (848)
Q Consensus 433 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 506 (848)
.+|+.||++++.++...-..+.++++|+.|+|++|. |++..-..+..+ ++|++|+|++|. |++..-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 357777777777665555566677777777777774 665444445543 357777777763 66655556667777
Q ss_pred CccccCCCCc-ccC
Q 038003 507 LEKLNLSHNN-LSD 519 (848)
Q Consensus 507 L~~L~Ls~N~-l~~ 519 (848)
|++|+|+++. ++.
T Consensus 141 L~~L~L~~c~~Itd 154 (176)
T 3e4g_A 141 LKYLFLSDLPGVKE 154 (176)
T ss_dssp CCEEEEESCTTCCC
T ss_pred CCEEECCCCCCCCc
Confidence 7777777764 443
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.67 E-value=6.9e-06 Score=77.59 Aligned_cols=84 Identities=18% Similarity=0.206 Sum_probs=50.0
Q ss_pred CCccEEEccCCccCCCCcccccccccccEEEccCCc-CCCCCCcccCCC----CccCeEeccCcc-cCCCCCCcccCccc
Q 038003 385 PKLQVLDLSSNHIVGKIPVQLEMLSSLNKLILNLNQ-LSGGVPLEFGSL----TKLQYLDLSTNK-LSSSIPKSIGNLLK 458 (848)
Q Consensus 385 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 458 (848)
.+|+.||+++|.|+...-..+..+++|+.|+|++|. +++..-..+..+ ++|++|+|++|. +++..-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467888888887775555556666777777777663 553333333333 256666666653 55444444555666
Q ss_pred cceeccccCc
Q 038003 459 LHYLNLSNNQ 468 (848)
Q Consensus 459 L~~L~Ls~N~ 468 (848)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 6666666664
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.62 E-value=9.4e-05 Score=77.15 Aligned_cols=78 Identities=21% Similarity=0.238 Sum_probs=56.3
Q ss_pred CCcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCC---cccceEEEeecCCeeEE
Q 038003 600 DFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHR---NNVKFHGFCYNGPHSFL 676 (848)
Q Consensus 600 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp---~iv~l~~~~~~~~~~~l 676 (848)
.+...+.+|.|..+.||+++..+|+.|++|+..... ......+.+|.+.|+.+.-. -+.+++++. ..++
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~----~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~l 87 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA----PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTL 87 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC----CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC----cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceE
Confidence 355567899999999999999999999999865432 22334678899988887422 244555542 3479
Q ss_pred EEeccCCCC
Q 038003 677 VCEYLDRGS 685 (848)
Q Consensus 677 V~e~~~~gs 685 (848)
||||++++.
T Consensus 88 v~e~l~~~~ 96 (288)
T 3f7w_A 88 AMEWVDERP 96 (288)
T ss_dssp EEECCCCCC
T ss_pred EEEeecccC
Confidence 999998764
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.57 E-value=0.0003 Score=77.69 Aligned_cols=77 Identities=14% Similarity=0.158 Sum_probs=46.5
Q ss_pred CCeEEcCCCCCCeeeCCCCCEEEeeccCccccCCCCCCcccccc--cccccCccccccC---CCCccchhhhHHHHHHHH
Q 038003 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAG--TFGYAAPEIAYTM---RATEKYDVYSFGVLVFEV 798 (848)
Q Consensus 724 ~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~~~~~~~~~~g--~~~y~aPE~~~~~---~~~~~~DiwSlG~il~el 798 (848)
+.++|||++|.||+++.++ ++++||+.+..-.+. ........ ...|.+|+..... ......++......+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~-~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG-FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH-HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH-HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 3899999999999998876 999999988753221 00000111 1245666544311 112234455777777777
Q ss_pred HhCC
Q 038003 799 IKGN 802 (848)
Q Consensus 799 ltg~ 802 (848)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.47 E-value=1.9e-05 Score=76.10 Aligned_cols=63 Identities=13% Similarity=0.162 Sum_probs=29.6
Q ss_pred CCCccEEEccCC-ccCCC----CcccccccccccEEEccCCcCCCCCCc----ccCCCCccCeEeccCcccC
Q 038003 384 SPKLQVLDLSSN-HIVGK----IPVQLEMLSSLNKLILNLNQLSGGVPL----EFGSLTKLQYLDLSTNKLS 446 (848)
Q Consensus 384 l~~L~~L~Ls~N-~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~ 446 (848)
-+.|+.|+|++| +|... +...+...+.|+.|+|++|+|...... .+..-+.|+.|+|+.|+|+
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 345666666654 55421 233444445555555555555422221 2223344555555555554
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.38 E-value=3.8e-05 Score=73.99 Aligned_cols=85 Identities=20% Similarity=0.257 Sum_probs=45.0
Q ss_pred cccceeccccCcCCCC----ChhHHhhhcccceecccCcccCcC----CCccccCCCCCccccCCCC---cccCC----C
Q 038003 457 LKLHYLNLSNNQLSHK----IPTEFEKLIHLSELDLSHNILQEE----IPPQVCNMGSLEKLNLSHN---NLSDF----I 521 (848)
Q Consensus 457 ~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N---~l~~~----~ 521 (848)
+.|+.|+|++|+|.+. +.+.+...+.|+.|+|++|.|++. +...+..-+.|++|+|++| .+... +
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~i 149 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDM 149 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHH
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHH
Confidence 3344444444444321 223334445555555555555432 1223444456778888754 33321 3
Q ss_pred cchhccccCceeecCCCCcc
Q 038003 522 PRCFEEMRSLSCIDISYNEL 541 (848)
Q Consensus 522 ~~~~~~l~~L~~l~ls~N~l 541 (848)
.+.+...+.|+.|+++.|..
T Consensus 150 a~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 150 MMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHhCCCcCeEeccCCCc
Confidence 34566778888888887754
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.28 E-value=0.00048 Score=72.24 Aligned_cols=139 Identities=14% Similarity=0.060 Sum_probs=75.1
Q ss_pred cceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcc-cceEEEeecCCeeEEEEecc-
Q 038003 604 KFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNN-VKFHGFCYNGPHSFLVCEYL- 681 (848)
Q Consensus 604 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~l~~~~~~~~~~~lV~e~~- 681 (848)
.+.|+.|....+|++ ..+++|+....... .....+|+.+++.+....+ .++++++. +.-++|+||+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-----~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~ 90 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-----YINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIA 90 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC---------CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-----eeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecC
Confidence 678999999999999 55888987543100 0112457777766632222 46665543 3347899999
Q ss_pred CCCCHHh------------------HhcCCCC--cccCCH-HHHHHHHHH--------------HHHHH----HHHhh-C
Q 038003 682 DRGSLAR------------------ILGDDVT--AKELGW-NRRINVIKG--------------VANAL----SYLHH-D 721 (848)
Q Consensus 682 ~~gsL~~------------------~l~~~~~--~~~l~~-~~~~~i~~q--------------ia~~L----~~LH~-~ 721 (848)
+|.++.. .++.... ...... .....+..+ +.+.+ +.+.. .
T Consensus 91 ~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~ 170 (301)
T 3dxq_A 91 GAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHP 170 (301)
T ss_dssp TCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSC
T ss_pred CCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcC
Confidence 5544321 0111100 001111 111111110 11111 11111 1
Q ss_pred CCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 722 CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 722 ~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
..+.+||+|+.+.||+ ..++.+.++||..+..-
T Consensus 171 ~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 171 LPLAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp CCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred CCceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 2235899999999999 56677899999988653
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.17 E-value=0.0008 Score=71.64 Aligned_cols=142 Identities=15% Similarity=0.108 Sum_probs=72.6
Q ss_pred ceeccCCcee-EEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC-C-CcccceEEEeecCCeeEEEEecc
Q 038003 605 FCIGKGGQGS-VYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-H-RNNVKFHGFCYNGPHSFLVCEYL 681 (848)
Q Consensus 605 ~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-p~iv~l~~~~~~~~~~~lV~e~~ 681 (848)
+.|+.|+... +|+....++..+++|...... .+.+..|+++++.+. + -.+.+++.+..+.+ ++|||++
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~-------~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l 94 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE-------GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDL 94 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT-------TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC-------CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeC
Confidence 4566666555 778875446778887654321 022345666666553 2 22456666643333 7899999
Q ss_pred CCCCHHhHhcCC---------------------CC--cccCCHHHHH-------H-------------HHHHHHHHHHHH
Q 038003 682 DRGSLARILGDD---------------------VT--AKELGWNRRI-------N-------------VIKGVANALSYL 718 (848)
Q Consensus 682 ~~gsL~~~l~~~---------------------~~--~~~l~~~~~~-------~-------------i~~qia~~L~~L 718 (848)
.+..+.+.+... .. ...++..... . ....+...++.+
T Consensus 95 ~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l 174 (333)
T 3csv_A 95 GDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQI 174 (333)
T ss_dssp CSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 776664332110 00 0111111100 0 001112222222
Q ss_pred h---hCCCCCeEEcCCCCCCeeeCCC----CCEEEeeccCcccc
Q 038003 719 H---HDCLPSIIHRDISSKNVLLDSN----FEAHVSDFGIAKFV 755 (848)
Q Consensus 719 H---~~~~~~ivH~Dlk~~NIll~~~----~~~kl~DfG~~~~~ 755 (848)
. ......+||||+.+.||+++.+ +.+.++||+.+..-
T Consensus 175 ~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 175 LSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred HHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1 1123479999999999999875 68999999988754
No 435
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.15 E-value=0.00068 Score=74.81 Aligned_cols=72 Identities=13% Similarity=0.155 Sum_probs=50.0
Q ss_pred cceeccCCceeEEEEEcCC--------CCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC-CCcccceEEEeecCCee
Q 038003 604 KFCIGKGGQGSVYKAELPS--------GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-HRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 604 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~ 674 (848)
.+.|+.|....||++...+ +..+++|+.... ...+.+.+|..+++.+. +.-..++++.+.+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~------~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~---- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP------ETESHLVAESVIFTLLSERHLGPKLYGIFSG---- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC------CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC------CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----
Confidence 4578899999999997653 578999987332 11244567888888874 3334677776543
Q ss_pred EEEEeccCCCC
Q 038003 675 FLVCEYLDRGS 685 (848)
Q Consensus 675 ~lV~e~~~~gs 685 (848)
.+||||++|.+
T Consensus 148 g~v~e~l~G~~ 158 (429)
T 1nw1_A 148 GRLEEYIPSRP 158 (429)
T ss_dssp EEEECCCCEEE
T ss_pred CEEEEEeCCcc
Confidence 38999998744
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.09 E-value=0.002 Score=68.05 Aligned_cols=157 Identities=13% Similarity=0.160 Sum_probs=84.3
Q ss_pred HHHHHHhhcCCcc-----cceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCc--ccc
Q 038003 591 HEEIIKATDDFDE-----KFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN--NVK 663 (848)
Q Consensus 591 ~~~~~~~~~~~~~-----~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~ 663 (848)
.+++.....+|.. .+.|+.|....+|++...++ .+++|+..... ..+.+..|.++++.+.... +.+
T Consensus 9 ~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~------~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 9 EDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV------EKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp HHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---------CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC------CHHHHHHHHHHHHHHHHCCCCCCc
Confidence 3444444444544 34577899999999987655 58899876521 1123455777666653211 233
Q ss_pred eEEE------eecCCeeEEEEeccCCCCHHh--------------HhcC---CCCcc---cC---CHHHHHH--------
Q 038003 664 FHGF------CYNGPHSFLVCEYLDRGSLAR--------------ILGD---DVTAK---EL---GWNRRIN-------- 706 (848)
Q Consensus 664 l~~~------~~~~~~~~lV~e~~~~gsL~~--------------~l~~---~~~~~---~l---~~~~~~~-------- 706 (848)
++.. ....+..++||+|++|..+.. .++. ..... .. .|.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 3321 122356789999999864311 0110 11100 01 1221100
Q ss_pred ----HHHHHHHHHHHHhhC----CCCCeEEcCCCCCCeeeCCCCCEEEeeccCccc
Q 038003 707 ----VIKGVANALSYLHHD----CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754 (848)
Q Consensus 707 ----i~~qia~~L~~LH~~----~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~ 754 (848)
+...+...++++++. ...++||+|+.+.||++++++.+.++||+.+..
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011244455555532 124799999999999998876668999998754
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.08 E-value=0.0011 Score=71.41 Aligned_cols=142 Identities=15% Similarity=0.231 Sum_probs=85.2
Q ss_pred cceeccCCceeEEEEEcC--------CCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC-CCcccceEEEeecCCee
Q 038003 604 KFCIGKGGQGSVYKAELP--------SGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-HRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 604 ~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~ 674 (848)
.+.+..|-...+|++... +++.+++|+.... ........+|.++++.+. +.-..++++++.+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-----~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~---- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-----LQGVDSLVLESVMFAILAERSLGPQLYGVFPE---- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC--------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-----cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----
Confidence 356888999999999764 2478999986331 123455678999988873 3334677777654
Q ss_pred EEEEeccCCCCHHh--------------H---hcCC-CC-cccCC--HHHHHHHHHHHHH-------------------H
Q 038003 675 FLVCEYLDRGSLAR--------------I---LGDD-VT-AKELG--WNRRINVIKGVAN-------------------A 714 (848)
Q Consensus 675 ~lV~e~~~~gsL~~--------------~---l~~~-~~-~~~l~--~~~~~~i~~qia~-------------------~ 714 (848)
.+||||++|..+.. . ++.. .. .+... +.++.++..++.. .
T Consensus 126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~ 205 (379)
T 3feg_A 126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDE 205 (379)
T ss_dssp EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHH
T ss_pred ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHH
Confidence 39999999865421 0 1111 11 12222 3455555544422 1
Q ss_pred HHHHh----hC-CCCCeEEcCCCCCCeeeCCC----CCEEEeeccCccc
Q 038003 715 LSYLH----HD-CLPSIIHRDISSKNVLLDSN----FEAHVSDFGIAKF 754 (848)
Q Consensus 715 L~~LH----~~-~~~~ivH~Dlk~~NIll~~~----~~~kl~DfG~~~~ 754 (848)
+.+|. .. ....+||+|+.+.||+++.+ +.+.++||..+..
T Consensus 206 ~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 206 MGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 23332 21 12368999999999999876 7899999998864
No 438
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.05 E-value=0.0029 Score=66.97 Aligned_cols=143 Identities=13% Similarity=0.113 Sum_probs=81.0
Q ss_pred ceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCc--ccceEEE-----eecCCeeEEE
Q 038003 605 FCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN--NVKFHGF-----CYNGPHSFLV 677 (848)
Q Consensus 605 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~--iv~l~~~-----~~~~~~~~lV 677 (848)
..++ |....||++...+|+.+++|+..... ...+.+..|..+++.+.... +++++.. ....+..++|
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-----~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l 105 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-----WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAV 105 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-----SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-----CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEE
Confidence 4566 88899999987778789999975331 12345667777777663212 3344432 1224566889
Q ss_pred EeccCCCCHH-----h------H---hc---CCCC---cccCCHHHH----HH---------------HHHHHHHHHHHH
Q 038003 678 CEYLDRGSLA-----R------I---LG---DDVT---AKELGWNRR----IN---------------VIKGVANALSYL 718 (848)
Q Consensus 678 ~e~~~~gsL~-----~------~---l~---~~~~---~~~l~~~~~----~~---------------i~~qia~~L~~L 718 (848)
|++++|..+. . . ++ .... ....++... .. +...+...++.+
T Consensus 106 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 185 (328)
T 1zyl_A 106 FPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAV 185 (328)
T ss_dssp EECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHH
Confidence 9999885421 0 0 11 0000 011122110 00 111111223333
Q ss_pred hhC----CCCCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 719 HHD----CLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 719 H~~----~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
... ....+||||+++.||+++ + .+.++||+.+..-
T Consensus 186 ~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 186 TAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp HHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred HHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 221 233689999999999999 4 8999999887643
No 439
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.84 E-value=0.0028 Score=67.46 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=28.3
Q ss_pred CCeEEcCCCCCCeeeCCCCCEEEeeccCcccc
Q 038003 724 PSIIHRDISSKNVLLDSNFEAHVSDFGIAKFV 755 (848)
Q Consensus 724 ~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~ 755 (848)
..+||+|+.+.||+++.++.+.++||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 37999999999999998888999999887654
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.84 E-value=0.0023 Score=70.80 Aligned_cols=74 Identities=16% Similarity=0.063 Sum_probs=47.5
Q ss_pred cceeccCCceeEEEEEcCC-CCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcc-cceEEEeecCCeeEEEEecc
Q 038003 604 KFCIGKGGQGSVYKAELPS-GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNN-VKFHGFCYNGPHSFLVCEYL 681 (848)
Q Consensus 604 ~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~l~~~~~~~~~~~lV~e~~ 681 (848)
.+.|+.|-...+|++...+ +..+++|+..... . ...+ ..+|..+++.+...++ .++++++.. .+||||+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~-~~id---R~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I 183 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-D-EIIN---REREKKISCILYNKNIAKKIYVFFTN----GRIEEFM 183 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-C-SCSC---HHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-h-hhcC---HHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEee
Confidence 4578999999999998764 4778899864321 1 1111 2478888888854444 577777632 3699999
Q ss_pred CCCCH
Q 038003 682 DRGSL 686 (848)
Q Consensus 682 ~~gsL 686 (848)
+|.++
T Consensus 184 ~G~~l 188 (458)
T 2qg7_A 184 DGYAL 188 (458)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 87543
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.73 E-value=0.0014 Score=58.86 Aligned_cols=56 Identities=20% Similarity=0.277 Sum_probs=29.4
Q ss_pred eecccCcccC-cCCCccccCCCCCccccCCCCcccCCCcchhccccCceeecCCCCccC
Q 038003 485 ELDLSHNILQ-EEIPPQVCNMGSLEKLNLSHNNLSDFIPRCFEEMRSLSCIDISYNELH 542 (848)
Q Consensus 485 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~ 542 (848)
.++.+++.|+ ..+|..+ -++|++|+|++|+|+.+.+..|..+++|+.|+|++|++.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3444555553 1333322 124556666666666555555666666666666666553
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.68 E-value=0.0025 Score=57.20 Aligned_cols=54 Identities=22% Similarity=0.222 Sum_probs=33.8
Q ss_pred eccCCccc-ccccccccCCCCCcEEEccccCCCCCCchhhhccccccEEEecccCcC
Q 038003 85 NLSFNLFF-GNIPLQIGNLSKLQYLDLGSNQLSGLIPPEIGKLNQLRRLYLDMNQLH 140 (848)
Q Consensus 85 ~l~~n~~~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 140 (848)
+.+++.++ ..+|..+. ++|++|+|++|+|+...+..|..+++|++|+|++|.+.
T Consensus 14 ~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 14 DCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp ECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 44444443 24554322 45777788877777666666777777777777777654
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.60 E-value=0.0024 Score=68.96 Aligned_cols=73 Identities=11% Similarity=0.089 Sum_probs=43.5
Q ss_pred cceeccCCceeEEEEEcCC---------CCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCc-ccceEEEeecCCe
Q 038003 604 KFCIGKGGQGSVYKAELPS---------GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRN-NVKFHGFCYNGPH 673 (848)
Q Consensus 604 ~~~lg~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~-iv~l~~~~~~~~~ 673 (848)
.+.++.|....+|++...+ +..+++|+..... ........|.++++.+.... +.++++.. .
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-----~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~-- 108 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-----DELYNTISEFEVYKTMSKYKIAPQLLNTF--N-- 108 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-----GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-----cceecHHHHHHHHHHHHhcCCCCceEEec--C--
Confidence 3568889999999997653 2688999865431 11111356777777774223 44666554 2
Q ss_pred eEEEEeccCCCC
Q 038003 674 SFLVCEYLDRGS 685 (848)
Q Consensus 674 ~~lV~e~~~~gs 685 (848)
-++||||++|..
T Consensus 109 ~~~v~e~i~G~~ 120 (369)
T 3c5i_A 109 GGRIEEWLYGDP 120 (369)
T ss_dssp TEEEEECCCSEE
T ss_pred CcEEEEEecCCc
Confidence 378999998854
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.49 E-value=0.0066 Score=65.61 Aligned_cols=146 Identities=17% Similarity=0.220 Sum_probs=85.7
Q ss_pred ceeccCCceeEEEEEcCC--------CCEEEEEEccccccc-----------CCch---hHHHHHHHHHHHhcCC-CCcc
Q 038003 605 FCIGKGGQGSVYKAELPS--------GDIVAVKKFNSQLLS-----------GNMA---DHDEFLNEVLALKEIR-HRNN 661 (848)
Q Consensus 605 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~-----------~~~~---~~~~~~~E~~~l~~l~-hp~i 661 (848)
+.|..|-...+|++...+ ...|.+++.-...-. +... ..+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 467789999999997754 367888886432100 0000 1122345888888874 5556
Q ss_pred cceEEEeecCCeeEEEEeccCCCCHHh--H---------------hcCC-C-CcccCC--HHHHHHHHHHHH--------
Q 038003 662 VKFHGFCYNGPHSFLVCEYLDRGSLAR--I---------------LGDD-V-TAKELG--WNRRINVIKGVA-------- 712 (848)
Q Consensus 662 v~l~~~~~~~~~~~lV~e~~~~gsL~~--~---------------l~~~-~-~~~~l~--~~~~~~i~~qia-------- 712 (848)
.++++++..+ +|+||++|.+|.. + ++.. . ..+... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 6788877532 8999999754411 1 1111 0 112222 234444443321
Q ss_pred --------------HHH----HHHhhC-CCCCeEEcCCCCCCeeeCCC------CCEEEeeccCccc
Q 038003 713 --------------NAL----SYLHHD-CLPSIIHRDISSKNVLLDSN------FEAHVSDFGIAKF 754 (848)
Q Consensus 713 --------------~~L----~~LH~~-~~~~ivH~Dlk~~NIll~~~------~~~kl~DfG~~~~ 754 (848)
.-+ .++... ....+||+|+.+.||+++++ +.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223222 22368999999999999876 7899999998864
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.44 E-value=0.028 Score=61.33 Aligned_cols=141 Identities=10% Similarity=0.072 Sum_probs=84.3
Q ss_pred cceeccCCceeEEEEEcCC--------CCEEEEEEcccccccCCchhHHHHHHHHHHHhcCC-CCcccceEEEeecCCee
Q 038003 604 KFCIGKGGQGSVYKAELPS--------GDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIR-HRNNVKFHGFCYNGPHS 674 (848)
Q Consensus 604 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~ 674 (848)
.+.+..|-...+|++...+ +..+++|+..... ...-...+|.++++.+. +.-..++++.+. -
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-----~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~ 145 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-----GKFYDSKVELDVFRYLSNINIAPNIIADFP----E 145 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC------CCCCHHHHHHHHHHHHHTTSSCCEEEEET----T
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-----chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----C
Confidence 3568889999999997653 5789999864421 11111346888877773 333456666442 2
Q ss_pred EEEEeccCCCCHHh--------------H---hcCC-C---------CcccCCHHHHHHHHHHHH---------------
Q 038003 675 FLVCEYLDRGSLAR--------------I---LGDD-V---------TAKELGWNRRINVIKGVA--------------- 712 (848)
Q Consensus 675 ~lV~e~~~~gsL~~--------------~---l~~~-~---------~~~~l~~~~~~~i~~qia--------------- 712 (848)
++||||++|..+.. . ++.. . ...+..+.++.++..++-
T Consensus 146 ~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 225 (424)
T 3mes_A 146 GRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELY 225 (424)
T ss_dssp EEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHH
T ss_pred CEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccH
Confidence 78999999865311 0 0110 0 111112444444443321
Q ss_pred ----HHHHHHhh---------------------CCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccc
Q 038003 713 ----NALSYLHH---------------------DCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKF 754 (848)
Q Consensus 713 ----~~L~~LH~---------------------~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~ 754 (848)
..+.+|.+ .....+||+|+.+.||+ +.++.+.++||..+..
T Consensus 226 ~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 226 SKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 22333321 11236899999999999 7788999999998864
No 446
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.21 E-value=0.23 Score=53.91 Aligned_cols=30 Identities=23% Similarity=0.413 Sum_probs=25.6
Q ss_pred CeEEcCCCCCCeee------CCCCCEEEeeccCccc
Q 038003 725 SIIHRDISSKNVLL------DSNFEAHVSDFGIAKF 754 (848)
Q Consensus 725 ~ivH~Dlk~~NIll------~~~~~~kl~DfG~~~~ 754 (848)
.+||+|+.+.||++ +++..++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46899999999999 4567899999998864
No 447
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=91.74 E-value=0.31 Score=47.05 Aligned_cols=102 Identities=16% Similarity=0.136 Sum_probs=67.4
Q ss_pred CHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCCeeeCCCCCEEEeeccCccccCCCCCCccc
Q 038003 685 SLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDSNFEAHVSDFGIAKFVGPHSSNWTE 764 (848)
Q Consensus 685 sL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~~~~~~~~~~~~~~ 764 (848)
+|.++++.. ..++++.+++.++.|.+.+|.-.-... .-..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 34 SLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc-----------
Confidence 788888754 468999999999999999987762110 111334567899999999888864 1110
Q ss_pred ccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCC
Q 038003 765 FAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 804 (848)
Q Consensus 765 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P 804 (848)
.....+.|||... ...+.+.=|||+|+++|.-+-=..|
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123567888763 3446778899999999999986665
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=89.21 E-value=0.97 Score=43.56 Aligned_cols=116 Identities=9% Similarity=0.050 Sum_probs=79.1
Q ss_pred CCCcccceEEEeecCCeeEEEEeccCCC-CHHhHhcCCCCcccCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCC
Q 038003 657 RHRNNVKFHGFCYNGPHSFLVCEYLDRG-SLARILGDDVTAKELGWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKN 735 (848)
Q Consensus 657 ~hp~iv~l~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~~LH~~~~~~ivH~Dlk~~N 735 (848)
.||+.++. .+-.+.+.+.+.++.-+.+ ++.+ .+..+...+.+++.+|+....+++.. +|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-------ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-------IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-------GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-------HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 68888876 4556666655555554322 3322 24577788999999999988777655 788999999
Q ss_pred eeeCCCCCEEEeeccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 736 VLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 736 Ill~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
|+++.++.+++.-.|....+.+ .. .++..=.-..=|++..++++++.|+.
T Consensus 110 L~f~~~~~p~i~~RGik~~l~P-----------------~~-----~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVDP-----------------LP-----VSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp EEECTTSCEEESCCEETTTBSC-----------------CC-----CCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EEEcCCCCEEEEEccCccCCCC-----------------CC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999999987776443322 21 11112233455678889999998754
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=82.96 E-value=2.8 Score=40.46 Aligned_cols=115 Identities=10% Similarity=0.079 Sum_probs=77.5
Q ss_pred CCCcccceEEEeecCCeeEEEEeccCCC-CHHhHhcCCCCcccCCHHHHHHHHHHHHHHHH-HHhhCCCCCeEEcCCCCC
Q 038003 657 RHRNNVKFHGFCYNGPHSFLVCEYLDRG-SLARILGDDVTAKELGWNRRINVIKGVANALS-YLHHDCLPSIIHRDISSK 734 (848)
Q Consensus 657 ~hp~iv~l~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qia~~L~-~LH~~~~~~ivH~Dlk~~ 734 (848)
.||+. -..+-.+.+.+.+.++.-+++ ++..+ +..+...+.+++.+|+.... +++.. +|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-------~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-------RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-------HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-------HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 68888 555556777777777765443 33332 34677888999999988877 66644 78899999
Q ss_pred CeeeCCCCCEEEeeccCccccCCCCCCcccccccccccCccccccCCCCccchhhhHHHHHHHHHhCCCCCcc
Q 038003 735 NVLLDSNFEAHVSDFGIAKFVGPHSSNWTEFAGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDF 807 (848)
Q Consensus 735 NIll~~~~~~kl~DfG~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P~~~ 807 (848)
||+++.++.+++.-.|.-..+ +|.-+ ++..=.-..=|++..++.+++.|+.
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l-----------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL-----------------PPDEW-----DDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB-----------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred eEEEeCCCcEEEEEcCCcccC-----------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999999999999877764333 22211 1111122455677788888887654
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=65.66 E-value=0.73 Score=50.83 Aligned_cols=62 Identities=8% Similarity=-0.034 Sum_probs=17.0
Q ss_pred ccceeccCCceeEEEEEcCC-CCEEEE------EEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEEee
Q 038003 603 EKFCIGKGGQGSVYKAELPS-GDIVAV------KKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGFCY 669 (848)
Q Consensus 603 ~~~~lg~G~~g~V~~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~ 669 (848)
..+.+| ||.||++.+.. ..+||| |..+.... ..+....+.+|..+++.++|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~--~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGV--SEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-------------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccc--cccccccccccccccccccccccCCCcceEE
Confidence 345566 99999997753 357888 65543221 1233456788999999999999999888754
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=41.72 E-value=47 Score=27.35 Aligned_cols=49 Identities=10% Similarity=0.083 Sum_probs=33.1
Q ss_pred ccCCCCccccccCCCCCccEEEccCCccccccCccccCcccccEeecccc
Q 038003 322 QNNLSGKMYEAFGDHPNLTFLDLSNNNFCGEISFNWGNFSKLSTFIVSMN 371 (848)
Q Consensus 322 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 371 (848)
+..++.+...+|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34566677778888888888888764 55555666666666666666543
No 452
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=39.83 E-value=1.9e+02 Score=32.35 Aligned_cols=84 Identities=14% Similarity=0.174 Sum_probs=49.3
Q ss_pred cceEEEeecCCeeEEEEeccCCCCHHhHh----------cCCCCc----ccCCHHHHHHHHHHHHH--HHHHHhhCCCCC
Q 038003 662 VKFHGFCYNGPHSFLVCEYLDRGSLARIL----------GDDVTA----KELGWNRRINVIKGVAN--ALSYLHHDCLPS 725 (848)
Q Consensus 662 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l----------~~~~~~----~~l~~~~~~~i~~qia~--~L~~LH~~~~~~ 725 (848)
+..|.+...+....+ .|++++.++.+.+ +..... ....+..+..+++.+|- .+.|+= |
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL-----G 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL-----G 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH-----T
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee-----e
Confidence 445555555554444 4666654444443 221111 11234455556665543 344444 3
Q ss_pred eEEcCCCCCCeeeCCCCCEEEeeccCcc
Q 038003 726 IIHRDISSKNVLLDSNFEAHVSDFGIAK 753 (848)
Q Consensus 726 ivH~Dlk~~NIll~~~~~~kl~DfG~~~ 753 (848)
| ||=.++|||++.+|++.=+|||.+-
T Consensus 476 i--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 V--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp C--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred c--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 3 6888999999999999999999874
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=30.31 E-value=62 Score=26.59 Aligned_cols=38 Identities=16% Similarity=0.105 Sum_probs=15.1
Q ss_pred CcccCCCCccCeEeccCcccCCCCCCcccCccccceecc
Q 038003 426 PLEFGSLTKLQYLDLSTNKLSSSIPKSIGNLLKLHYLNL 464 (848)
Q Consensus 426 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 464 (848)
..+|.+.++|+.+.+-.+ ++.+...+|.++.+|+.+.+
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 334444444444444332 22233334444444444443
No 454
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=30.20 E-value=1.6e+02 Score=30.14 Aligned_cols=140 Identities=14% Similarity=0.121 Sum_probs=73.9
Q ss_pred CcccceeccCCceeEEEEEcCCCCEEEEEEcccccccCCchhHHHHHHHHHHHhcCCCCcccceEEE-------------
Q 038003 601 FDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADHDEFLNEVLALKEIRHRNNVKFHGF------------- 667 (848)
Q Consensus 601 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~------------- 667 (848)
+..++..-.|..|. |.+.. ++..++||... ....+-+..++...-.+.-|...-+...
T Consensus 71 v~~I~~s~~Gstgv-ff~~t-d~~~~VVK~s~-------~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~ 141 (342)
T 1cja_A 71 FKGIERSEKGTEGL-FFVET-ESGVFIVKRST-------NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAA 141 (342)
T ss_dssp EEEEEECCSTTSCE-EEEEE-SSCEEEEECCT-------THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHH
T ss_pred eeEEEeccCCCCCe-EEEEe-CCCEEEEeCcH-------HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHH
Confidence 44445556666554 54433 58889999431 1233445556655555666653322211
Q ss_pred e---------ecCCeeEEEEeccCCCCHHhHhcCCCCcccCCHHHHHHHHHHH--HHHHHHHhhCCCC-CeE-EcCCCCC
Q 038003 668 C---------YNGPHSFLVCEYLDRGSLARILGDDVTAKELGWNRRINVIKGV--ANALSYLHHDCLP-SII-HRDISSK 734 (848)
Q Consensus 668 ~---------~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi--a~~L~~LH~~~~~-~iv-H~Dlk~~ 734 (848)
+ ......+++|+|.+|..|.+.-... ....+.. +...++ +-++.++..++.+ ..+ +.-=.++
T Consensus 142 ~~~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~-~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~ 216 (342)
T 1cja_A 142 IDKSFRVITTLANQANILLMELVRGITLNKLTTTS-APEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLD 216 (342)
T ss_dssp HCSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSS-HHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGG
T ss_pred hhhhhHHHHHhhcccceehhhhcCCCccccchhhh-hhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChh
Confidence 0 0122456999999976655432211 1112322 223332 2345555555331 111 1225788
Q ss_pred CeeeCCCCC-EEEeeccCccc
Q 038003 735 NVLLDSNFE-AHVSDFGIAKF 754 (848)
Q Consensus 735 NIll~~~~~-~kl~DfG~~~~ 754 (848)
|||+++++. +.++|-+.+..
T Consensus 217 NIL~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 217 NIMLSERGATVVPIDSKIIPL 237 (342)
T ss_dssp GEEEESBTTCEEECSCCCCCC
T ss_pred heEEeCCCCeEEEEcCCcccc
Confidence 999987655 88999998865
No 455
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=24.19 E-value=19 Score=19.73 Aligned_cols=9 Identities=44% Similarity=1.295 Sum_probs=7.0
Q ss_pred CCCccCceE
Q 038003 40 SPCSWFGIS 48 (848)
Q Consensus 40 ~~c~w~gv~ 48 (848)
..|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 369999974
Done!