BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038006
(808 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C9R6|PUM7_ARATH Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana
GN=APUM7 PE=3 SV=2
Length = 650
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/403 (59%), Positives = 299/403 (74%), Gaps = 40/403 (9%)
Query: 406 EGFGCEDSFIIQGRSINQAASKGRDSLKGYKQNNLNEIVTRNQPVKICKHDGCAYDGVIC 465
E F ++SF + G+SI+ S R NN N P +IC
Sbjct: 288 EPFSSDESFFMNGKSIDHQRSNTR----ALMSNNGN-------PTEICH----------- 325
Query: 466 DNGQSLMDIRCPLHLLSSSSSLADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDE 525
S ++ D++GY+Y MAKDQ+GCRFLQR+FDEGT +D IIF+E
Sbjct: 326 ----------------PSLPNMCDIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNE 369
Query: 526 VIDHIVELMMEQFGNYLVQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKL 585
VI H+VELMM+ FGNYL+QKLL+VCTEEQ T+I+L+ TEEPGQL+R+ LN YGTRVVQ+L
Sbjct: 370 VIAHVVELMMDPFGNYLMQKLLDVCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRL 429
Query: 586 IETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCV 645
+ET+++ +Q+SLVK AL+PGFLDLIKDLNGNHV+QRCLQCLS EDN+ FDAA KFC
Sbjct: 430 VETIRSGKQISLVKLALRPGFLDLIKDLNGNHVIQRCLQCLSTEDNK--FIFDAATKFCT 487
Query: 646 DIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVS 705
+IATH+HGCCVLQ+CIA+S+ + R+KLI EIS+N LAQDPFGNY VQ++IEL+IPS
Sbjct: 488 EIATHRHGCCVLQKCIAYSMRQQREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAV 547
Query: 706 ANLLSQFKGHYVHLSTQKFSSHVVEKCLKHFGESRSQIVHELLSVPHFEQLLQDPFANYV 765
A +L+Q KGHYV LS QKFSSH+VE+CL H ESR QIV EL+SVPHF+QLLQDP+AN+V
Sbjct: 548 AMMLAQLKGHYVQLSMQKFSSHMVERCLMHCPESRPQIVRELVSVPHFDQLLQDPYANFV 607
Query: 766 IQCALSVTKGPLHASLIEAARRHTNLRTSPYCKRIFSRNISKK 808
IQ AL+ TKGPLHASL+E R H+ LR +PYCKRIFSRN+ KK
Sbjct: 608 IQAALAATKGPLHASLVEVIRPHSILRNNPYCKRIFSRNLLKK 650
Score = 33.9 bits (76), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 46/117 (39%), Gaps = 20/117 (17%)
Query: 168 ETGLCENLYRMNIGGVGEEHLDHSAKLKRLDIVDPLGVRFGFTSD-----------ASLG 216
+ GLCE+LYRMNI EE A+ + L P FT D S G
Sbjct: 106 DLGLCEDLYRMNIKEDVEEDQIRYARTETLKDPLPKSDHTDFTPDPLYNFSPKHYEPSNG 165
Query: 217 GSV--GVPYNVEKYSVFDGLNNVVSDYQGLSSSHTAVSKSFDDERKSLLTAFGGQYG 271
G V G PY + +N + + G S +D+++++ Q+G
Sbjct: 166 GFVSGGFPYGFFRPPKESSINQSCASWSGFDQSK-------NDDKRNMFGNNPQQFG 215
>sp|Q9LM20|PUM8_ARATH Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana
GN=APUM8 PE=3 SV=2
Length = 515
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 214/325 (65%), Positives = 272/325 (83%), Gaps = 2/325 (0%)
Query: 483 SSSSLADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYL 542
S +++ +GY+Y MAKDQ+GCRFLQ +F++G+ LD +IF EVI H+VELMM+ FGNYL
Sbjct: 192 SLPKVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYL 251
Query: 543 VQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAAL 602
+QKLL+VC EEQ T+I+LMVT EPGQL+R+ LN YGTRVVQ+L+E++KTR+Q+SLVK+AL
Sbjct: 252 MQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSAL 311
Query: 603 KPGFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIA 662
+PGFL+LI+DLNGNHV+QRCLQCLS EDNE F+ A KFC+DIATH+HGCCVLQ+CIA
Sbjct: 312 RPGFLNLIRDLNGNHVIQRCLQCLSTEDNE--FIFEDATKFCIDIATHRHGCCVLQKCIA 369
Query: 663 HSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQ 722
+S G R+KL+TEIS+N LAQDP+GNY VQ+++EL+ S A +L+Q KGHYV LS Q
Sbjct: 370 YSSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQ 429
Query: 723 KFSSHVVEKCLKHFGESRSQIVHELLSVPHFEQLLQDPFANYVIQCALSVTKGPLHASLI 782
KFSSH+VE+CL H ESR QIV EL+SVPHF+ L+QDP+AN+VIQ AL+VTKG LHA+L+
Sbjct: 430 KFSSHMVERCLTHCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVTKGSLHATLV 489
Query: 783 EAARRHTNLRTSPYCKRIFSRNISK 807
E R H+ LR +PYCKRIFSRN+ K
Sbjct: 490 EVIRPHSILRNNPYCKRIFSRNLLK 514
>sp|Q9LDW3|PUM11_ARATH Pumilio homolog 11 OS=Arabidopsis thaliana GN=APUM11 PE=3 SV=2
Length = 556
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 257/324 (79%), Gaps = 4/324 (1%)
Query: 485 SSLADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQ 544
+S+ D G +Y MAKDQ GCR LQ+ DEG F+D+ IIF EVI++++EL + FGNYL+Q
Sbjct: 237 ASMVDSYGSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQ 296
Query: 545 KLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKP 604
KL+ VC EEQ T+IL+ +T +PG LV++ +N YGTRVVQKLIET+ T++Q+SLVK+AL P
Sbjct: 297 KLIEVCNEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVP 356
Query: 605 GFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHS 664
GFL L ++LNGNHV+ CL+ S DN+ L +AA KFC++IAT +HGCCVLQRC+++S
Sbjct: 357 GFLSLFRELNGNHVILNCLKFFSPNDNKFIL--EAATKFCIEIATTRHGCCVLQRCVSYS 414
Query: 665 IGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKF 724
+G +KL+ EIS+N LAQDPFGNY+VQYIIE K+ V N+L + +G+YV L+TQKF
Sbjct: 415 VGEQHEKLVDEISRNSLLLAQDPFGNYLVQYIIEKKVGGV--NVLFELRGNYVKLATQKF 472
Query: 725 SSHVVEKCLKHFGESRSQIVHELLSVPHFEQLLQDPFANYVIQCALSVTKGPLHASLIEA 784
SHVVEKCL+++ ESRSQIV+EL+SV +F LLQDP+ANYVIQCALS TKG + ASL+E
Sbjct: 473 GSHVVEKCLRYYPESRSQIVNELVSVLNFGYLLQDPYANYVIQCALSKTKGFVRASLVEK 532
Query: 785 ARRHTNLRTSPYCKRIFSRNISKK 808
RR+ NL+ +PYCKRIFS+N+ KK
Sbjct: 533 VRRYENLKMTPYCKRIFSKNLWKK 556
>sp|Q1PFN9|PUM9_ARATH Pumilio homolog 9 OS=Arabidopsis thaliana GN=APUM9 PE=2 SV=1
Length = 564
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/323 (59%), Positives = 253/323 (78%), Gaps = 4/323 (1%)
Query: 486 SLADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQK 545
S+ ++ G + MAKDQ GCR LQ++ +EGTF + ++I +IDH+VEL M+ FGNY+VQK
Sbjct: 246 SMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQK 305
Query: 546 LLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPG 605
L +V EEQ T I+ ++T P +L+R+CLNTYGTRVVQK+IET+KT+QQ++LVK+ LKPG
Sbjct: 306 LFDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPG 365
Query: 606 FLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSI 665
FL L+KDLNGNHV+Q CLQ L DNE L +AA K+C +IA H+HGCCVLQ CI++S+
Sbjct: 366 FLALVKDLNGNHVIQSCLQTLGPNDNEFVL--EAATKYCAEIAIHRHGCCVLQCCISNSV 423
Query: 666 GRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFS 725
G R++L+ EIS+N HL+QDPFGNYVVQY+I+ ++ +V LL QF+ HY L+TQKFS
Sbjct: 424 GLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQVSAV--KLLVQFRMHYAELATQKFS 481
Query: 726 SHVVEKCLKHFGESRSQIVHELLSVPHFEQLLQDPFANYVIQCALSVTKGPLHASLIEAA 785
SHV+EKCL+ + ESR++IV ELL VP+FE LLQDP+ANYVIQ ALSVTKGP+ A L+
Sbjct: 482 SHVIEKCLRKYPESRAEIVRELLCVPNFEYLLQDPYANYVIQTALSVTKGPVRAKLVAKV 541
Query: 786 RRHTNLRTSPYCKRIFSRNISKK 808
R+ L +SPYCK+IFS+ I KK
Sbjct: 542 YRYGKLHSSPYCKKIFSKTILKK 564
>sp|Q9LP21|PUM10_ARATH Putative pumilio homolog 10 OS=Arabidopsis thaliana GN=APUM10 PE=3
SV=2
Length = 528
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/422 (46%), Positives = 286/422 (67%), Gaps = 25/422 (5%)
Query: 392 VSESFMPVNGAGAIEGFGCEDSFIIQGRSINQAASK-----GRDSLKGYKQNNLNEIVTR 446
+ +SF P NG + F F++ IN+ + G D+ KG + + E +
Sbjct: 127 LQDSFNP-NGFEEMMAFKDHKDFLLD--HINEPIKRSPFLRGNDAFKG---SLMFEGIRV 180
Query: 447 NQPVKICKHDGCAYDGVICDNGQSLMDIRCPLHLLSSSSSLADVRGYIYSMAKDQNGCRF 506
+Q + + G +Y NG PL L+S + ++ G + MA+DQ GCR
Sbjct: 181 SQILAAMEGSGASYPDEPKINGG------LPLDLVS----MVEIYGSVNLMARDQIGCRA 230
Query: 507 LQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNVCTEEQMTRILLMVTEEP 566
LQ++ +EGT LD ++IF E+IDH+VEL M+ GNY+VQKLL V EEQ T I+ ++T +P
Sbjct: 231 LQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQKLLVVSDEEQRTMIVSVLTSKP 290
Query: 567 GQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCL 626
+L+++CLNT GTRV+QK+I+T+KT+QQ++LVK+AL+PGFL L+ D NG HVLQ CL+ L
Sbjct: 291 RELIKICLNTNGTRVIQKMIKTVKTKQQIALVKSALEPGFLVLVNDSNGYHVLQSCLEFL 350
Query: 627 SNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQD 686
DN+ + +AA ++C +ATHQ+GC VLQ + +++G ++L+ EIS++ L+QD
Sbjct: 351 VPNDNKFVV--EAATEYCAQLATHQYGCYVLQCSLINTVGLQHERLVAEISRDSLRLSQD 408
Query: 687 PFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEKCLKHFGESRSQIVHE 746
PFGNYVVQ +I+ ++ SV NLL F+ H + L+TQKFSSHV+EKCL+ + ESR++IV E
Sbjct: 409 PFGNYVVQCLIDQQVSSV--NLLLPFRTHCIELATQKFSSHVIEKCLRKYPESRAEIVRE 466
Query: 747 LLSVPHFEQLLQDPFANYVIQCALSVTKGPLHASLIEAARRHTNLRTSPYCKRIFSRNIS 806
LLS P+FEQLLQDP+ANYVIQ ALSVTKG + A L+E +R L+++PYCK+IFS+ I
Sbjct: 467 LLSYPNFEQLLQDPYANYVIQTALSVTKGAVRARLVEKVKRFGKLQSNPYCKKIFSKTIL 526
Query: 807 KK 808
KK
Sbjct: 527 KK 528
>sp|Q9LVC3|PUM12_ARATH Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2
Length = 596
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/326 (48%), Positives = 236/326 (72%), Gaps = 4/326 (1%)
Query: 485 SSLADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQ 544
+S+A+ RG IY +AKDQ+GCRFLQR+F E D+++IF+E+ID+I ELMM+ FGNYLVQ
Sbjct: 273 NSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQ 332
Query: 545 KLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKP 604
KLL VC E+Q +I+ +T +PG L+++ + +GTR VQK++ET K +++S++ +ALK
Sbjct: 333 KLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKH 392
Query: 605 GFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHS 664
G + LIK++NGNHV+QRCLQ L + F+AA CV++AT +HGCCVLQ+C+ +S
Sbjct: 393 GIVHLIKNVNGNHVVQRCLQYLLPYCGK--FLFEAAITHCVELATDRHGCCVLQKCLGYS 450
Query: 665 IGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKF 724
G + L++EI+ N L+QDPFGNYV+QY+ EL++ + +L Q +G+Y LS QK
Sbjct: 451 EGEQKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKC 510
Query: 725 SSHVVEKCLKHFGES-RSQIVHELLSVPHFEQLLQDPFANYVIQCALSVTKGPLHASLIE 783
SS+VVEKCLK + R++I+ EL++ +Q++ DP+ NYVIQ AL +KG +HA L++
Sbjct: 511 SSNVVEKCLKLADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAALKQSKGNVHALLVD 570
Query: 784 AARRH-TNLRTSPYCKRIFSRNISKK 808
A + + ++LRT+PY K++ S SKK
Sbjct: 571 AIKLNISSLRTNPYGKKVLSALSSKK 596
>sp|Q92359|YDHE_SCHPO Pumilio domain-containing protein C6G9.14 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC6G9.14 PE=4 SV=1
Length = 681
Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/313 (38%), Positives = 189/313 (60%), Gaps = 9/313 (2%)
Query: 494 IYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNVCTEE 553
I S KDQ+GCR+LQR+ ++ + +F E ++ LM++ FGNYL QKL +E
Sbjct: 348 ILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHASEA 407
Query: 554 QMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIKDL 613
Q + + ++ +LV + N +GTR +QK+I+ + + Q+S + AL+P + L KDL
Sbjct: 408 QRSTFIQIIAP---KLVPISFNMHGTRALQKIIDLVSSPDQISCIVNALRPNVVLLTKDL 464
Query: 614 NGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLI 673
NGNHV+Q+CL S ED + FDA + +D++TH+HGCCV+QRC H+ ++L+
Sbjct: 465 NGNHVIQKCLNKFSQEDCQ--FIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQIEQLV 522
Query: 674 TEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEKCL 733
I + L QD FGNYV+QY++EL P+ + ++S F LSTQKFSS+V+EKC+
Sbjct: 523 EHIVPHALTLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSSNVMEKCI 582
Query: 734 KHFGES--RSQIVHELLSVPHFEQLLQDPFANYVIQCALSVTKGPLHASLIEAARRH-TN 790
F + + +++ EL+ H +LL+D FANYVIQ AL A L+E + +
Sbjct: 583 -FFAPAAIKEKLISELMDEKHLPKLLRDSFANYVIQTALDNASVKQRAELVERIKPLIPS 641
Query: 791 LRTSPYCKRIFSR 803
++ +P +RI S+
Sbjct: 642 IKNTPCGRRILSK 654
>sp|P25339|PUF4_YEAST Pumilio homology domain family member 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PUF4 PE=1 SV=2
Length = 888
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 136/322 (42%), Positives = 182/322 (56%), Gaps = 18/322 (5%)
Query: 492 GYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNVCT 551
G I+S+ KDQ+GCRFLQ+ D IF+E D+ VELM + FGNYL+QKLL T
Sbjct: 566 GSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVT 625
Query: 552 EEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIK 611
EQ RI+L P V + LN +GTR +QKLIE +KT ++ +V +L+P + L K
Sbjct: 626 TEQ--RIVLTKISSP-HFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSK 682
Query: 612 DLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDK 671
DLNGNHV+Q+CLQ L E+ FDA + C+DIATH+HGCCVLQRC+ H D
Sbjct: 683 DLNGNHVIQKCLQRLKPEN--FQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDN 740
Query: 672 LITEISKNGRHLAQDPFGNYVVQYII----ELKIPSVSANLLSQFKGHYVHLSTQKFSSH 727
L ++ L DPFGNYVVQYII E + ++ K + LS KF S+
Sbjct: 741 LCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSN 800
Query: 728 VVEKCLKHFGESRSQIVHELLS---VPHFEQLLQDPFANYVIQCALSVTKGP---LHASL 781
V+EK LK S I+ E+L+ + LL D + NYV+Q AL ++ L+ L
Sbjct: 801 VIEKILKTAIVSEPMIL-EILNNGGETGIQSLLNDSYGNYVLQTALDISHKQNDYLYKRL 859
Query: 782 IE--AARRHTNLRTSPYCKRIF 801
E A +R +P+ KRI
Sbjct: 860 SEIVAPLLVGPIRNTPHGKRII 881
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 51/218 (23%)
Query: 490 VRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNV 549
+R Y ++KD NG +Q+ + Q IFD + D +++ + G ++Q+ L+
Sbjct: 673 LRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDH 732
Query: 550 CTEEQMTRI---LLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
T EQ + LL + + ++ L+ +G VVQ +I + + +
Sbjct: 733 GTTEQCDNLCDKLLALVD------KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIV---- 782
Query: 607 LDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIG 666
H+L+ ++++ H+ G V+++ + +I
Sbjct: 783 ----------HLLK---------------------PRAIELSIHKFGSNVIEKILKTAIV 811
Query: 667 RHRDKLITEISKNG-----RHLAQDPFGNYVVQYIIEL 699
+ +I EI NG + L D +GNYV+Q +++
Sbjct: 812 --SEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDI 847
>sp|Q09829|YAD3_SCHPO Pumilio domain-containing protein C4G8.03c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC4G8.03c PE=4 SV=1
Length = 780
Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 174/282 (61%), Gaps = 6/282 (2%)
Query: 492 GYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNVCT 551
G++ ++ KDQ GCR+LQ++ DE ++ + F E+ +V+LM++ FGNY+ QKL +
Sbjct: 465 GHLSTICKDQYGCRYLQKLLDENPKVNASLFFPEIRQSVVQLMIDPFGNYMCQKLFVYAS 524
Query: 552 EEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIK 611
EQ +L + E +V +C N YGTR +Q +I+ L + +Q+SL+ + P L
Sbjct: 525 REQKLSMLNGIGE---GIVDICSNLYGTRSMQNIIDKLTSNEQISLLLKIIIPSLTTLAC 581
Query: 612 DLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDK 671
D NG HVLQ+C+ E E F + + + +AT++HGCC+LQRC+ + G +++
Sbjct: 582 DNNGTHVLQKCIAKFPPEKLEP--LFLSMEENLITLATNRHGCCILQRCLDRTNGDIQER 639
Query: 672 LITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEK 731
L+ I K+ L Q+ +GNY+VQ+++EL I + ++ +F G+ LS QKFSS+ +E+
Sbjct: 640 LVNSIIKSCLLLVQNAYGNYLVQHVLELNIQPYTERIIEKFFGNICKLSLQKFSSNAIEQ 699
Query: 732 CLKHFGES-RSQIVHELLSVPHFEQLLQDPFANYVIQCALSV 772
C++ S R Q++ E LS P+ EQLL D +ANYV+Q L+V
Sbjct: 700 CIRTASPSTREQMLQEFLSFPNIEQLLDDCYANYVMQRFLNV 741
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 7/219 (3%)
Query: 567 GQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCL 626
G L +C + YG R +QKL++ + SL ++ + L+ D GN++ Q+
Sbjct: 465 GHLSTICKDQYGCRYLQKLLDE-NPKVNASLFFPEIRQSVVQLMIDPFGNYMCQKLFVYA 523
Query: 627 SNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEIS-KNGRHLAQ 685
S E L + + VDI ++ +G +Q I + L+ +I + LA
Sbjct: 524 SREQKLSML--NGIGEGIVDICSNLYGTRSMQNIIDKLTSNEQISLLLKIIIPSLTTLAC 581
Query: 686 DPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEKCL-KHFGESRSQIV 744
D G +V+Q I P L + + + L+T + ++++CL + G+ + ++V
Sbjct: 582 DNNGTHVLQKCIAKFPPEKLEPLFLSMEENLITLATNRHGCCILQRCLDRTNGDIQERLV 641
Query: 745 HELLSVPHFEQLLQDPFANYVIQCALSVTKGPLHASLIE 783
+ ++ L+Q+ + NY++Q L + P +IE
Sbjct: 642 NSIIKSCLL--LVQNAYGNYLVQHVLELNIQPYTERIIE 678
>sp|Q80U58|PUM2_MOUSE Pumilio homolog 2 OS=Mus musculus GN=Pum2 PE=1 SV=2
Length = 1066
Score = 183 bits (464), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 181/325 (55%), Gaps = 13/325 (4%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKL 546
L D+ G+I ++DQ+G RF+Q+ + T + QI+F+E++ +LM + FGNY++QK
Sbjct: 724 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKF 783
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQV-SLVKAALKPG 605
+ +Q L + T G ++ + L YG RV+QK +E++ + QQV S + L
Sbjct: 784 FEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGH 840
Query: 606 FLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSI 665
L +KD NGNHV+Q+C++C+ + + DA ++TH +GC V+QR + H
Sbjct: 841 VLKCVKDQNGNHVVQKCIECV--QPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCT 898
Query: 666 GRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFS 725
++ E+ ++ L QD +GNYV+Q+++E P + ++S+ +G + LS KF+
Sbjct: 899 AEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFA 958
Query: 726 SHVVEKCLKHFGES-RSQIVHELL---SVPH--FEQLLQDPFANYVIQCALSVTKGPLHA 779
S+VVEKC+ H + R+ ++ E+ PH +++D +ANYV+Q + + +
Sbjct: 959 SNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRK 1018
Query: 780 SLIEAARRH-TNLRTSPYCKRIFSR 803
++ R H T LR Y K I ++
Sbjct: 1019 IIMHKIRPHITTLRKYTYGKHILAK 1043
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 490 VRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFD---EVIDHIVELMMEQFGNYLVQKL 546
+RG++ +A GCR +Q+ E D Q+I + E+ H+++ + +Q GN++VQK
Sbjct: 799 IRGHVLPLALQMYGCRVIQKAL-ESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKC 857
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
+ C + Q + ++ + GQ+ + + YG RV+Q+++E Q + +++ L
Sbjct: 858 IE-CVQPQSLQFIIDAFK--GQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE-LHQHT 913
Query: 607 LDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIG 666
L++D GN+V+Q L+ ED + + K + ++ H+ V+++C+ H+
Sbjct: 914 EQLVQDQYGNYVIQHVLEHGRPEDKS-KIVSEIRGK-VLALSQHKFASNVVEKCVTHASR 971
Query: 667 RHRDKLITEI--SKNGRHLA-----QDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHL 719
R LI E+ +G H A +D + NYVVQ +I++ P+ ++ + + H L
Sbjct: 972 AERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTL 1031
Query: 720 STQKFSSHVVEKCLKHF 736
+ H++ K K++
Sbjct: 1032 RKYTYGKHILAKLEKYY 1048
>sp|Q8TB72|PUM2_HUMAN Pumilio homolog 2 OS=Homo sapiens GN=PUM2 PE=1 SV=2
Length = 1066
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 181/325 (55%), Gaps = 13/325 (4%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKL 546
L D+ G+I ++DQ+G RF+Q+ + T + Q++F+E++ +LM + FGNY++QK
Sbjct: 724 LRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKF 783
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQV-SLVKAALKPG 605
+ +Q L + T G ++ + L YG RV+QK +E++ + QQV S + L
Sbjct: 784 FEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGH 840
Query: 606 FLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSI 665
L +KD NGNHV+Q+C++C+ + + DA ++TH +GC V+QR + H
Sbjct: 841 VLKCVKDQNGNHVVQKCIECV--QPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCT 898
Query: 666 GRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFS 725
++ E+ ++ L QD +GNYV+Q+++E P + ++S+ +G + LS KF+
Sbjct: 899 AEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFA 958
Query: 726 SHVVEKCLKHFGES-RSQIVHELL---SVPH--FEQLLQDPFANYVIQCALSVTKGPLHA 779
S+VVEKC+ H + R+ ++ E+ PH +++D +ANYV+Q + + +
Sbjct: 959 SNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRK 1018
Query: 780 SLIEAARRH-TNLRTSPYCKRIFSR 803
++ R H T LR Y K I ++
Sbjct: 1019 IIMHKIRPHITTLRKYTYGKHILAK 1043
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 490 VRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFD---EVIDHIVELMMEQFGNYLVQKL 546
+RG++ +A GCR +Q+ E D Q+I + E+ H+++ + +Q GN++VQK
Sbjct: 799 IRGHVLPLALQMYGCRVIQKAL-ESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKC 857
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
+ C + Q + ++ + GQ+ + + YG RV+Q+++E Q + +++ L
Sbjct: 858 IE-CVQPQSLQFIIDAFK--GQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE-LHQHT 913
Query: 607 LDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIG 666
L++D GN+V+Q L+ ED + + K + ++ H+ V+++C+ H+
Sbjct: 914 EQLVQDQYGNYVIQHVLEHGRPEDKS-KIVSEIRGK-VLALSQHKFASNVVEKCVTHASR 971
Query: 667 RHRDKLITEI--SKNGRHLA-----QDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHL 719
R LI E+ +G H A +D + NYVVQ +I++ P+ ++ + + H L
Sbjct: 972 AERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTL 1031
Query: 720 STQKFSSHVVEKCLKHF 736
+ H++ K K++
Sbjct: 1032 RKYTYGKHILAKLEKYY 1048
>sp|Q14671|PUM1_HUMAN Pumilio homolog 1 OS=Homo sapiens GN=PUM1 PE=1 SV=3
Length = 1186
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 182/324 (56%), Gaps = 13/324 (4%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKL 546
L ++ G+I ++DQ+G RF+Q + T + Q++F+E++ +LM++ FGNY++QK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
+ EQ L + G ++ + L YG RV+QK +E + + QQ +V+ L
Sbjct: 906 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 961
Query: 607 LDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIG 666
L +KD NGNHV+Q+C++C+ + + DA ++TH +GC V+QR + H +
Sbjct: 962 LKCVKDQNGNHVVQKCIECV--QPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLP 1019
Query: 667 RHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSS 726
++ E+ ++ L QD +GNYV+Q+++E P + ++++ +G+ + LS KF+S
Sbjct: 1020 DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFAS 1079
Query: 727 HVVEKCLKHFGES-RSQIVHELLSV---PH--FEQLLQDPFANYVIQCALSVTKGPLHAS 780
+VVEKC+ H + R+ ++ E+ ++ PH +++D +ANYV+Q + V +
Sbjct: 1080 NVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKI 1139
Query: 781 LIEAARRH-TNLRTSPYCKRIFSR 803
++ R H LR Y K I ++
Sbjct: 1140 VMHKIRPHIATLRKYTYGKHILAK 1163
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 126/254 (49%), Gaps = 13/254 (5%)
Query: 490 VRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNV 549
+RG++ S+A GCR +Q+ + + E+ H+++ + +Q GN++VQK +
Sbjct: 921 IRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE- 979
Query: 550 CTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDL 609
C + Q + ++ + GQ+ + + YG RV+Q+++E Q + +++ L L
Sbjct: 980 CVQPQSLQFIIDAFK--GQVFALSTHPYGCRVIQRILEHCLPDQTLPILEE-LHQHTEQL 1036
Query: 610 IKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHR 669
++D GN+V+Q L+ ED + + V ++ H+ V+++C+ H+ R
Sbjct: 1037 VQDQYGNYVIQHVLEHGRPEDKS-KIVAEIRGNVLV-LSQHKFASNVVEKCVTHASRTER 1094
Query: 670 DKLITEI--SKNGRHLA-----QDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQ 722
LI E+ +G H A +D + NYVVQ +I++ P ++ + + H L
Sbjct: 1095 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKY 1154
Query: 723 KFSSHVVEKCLKHF 736
+ H++ K K++
Sbjct: 1155 TYGKHILAKLEKYY 1168
>sp|Q5R5X3|PUM1_PONAB Pumilio homolog 1 OS=Pongo abelii GN=PUM1 PE=2 SV=1
Length = 1186
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 182/324 (56%), Gaps = 13/324 (4%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKL 546
L ++ G+I ++DQ+G RF+Q + T + Q++F+E++ +LM++ FGNY++QK
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
+ EQ L + G ++ + L YG RV+QK +E + + QQ +V+ L
Sbjct: 906 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRE-LDGHV 961
Query: 607 LDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIG 666
L +KD NGNHV+Q+C++C+ + + DA ++TH +GC V+QR + H +
Sbjct: 962 LKCVKDQNGNHVVQKCIECV--QPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLP 1019
Query: 667 RHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSS 726
++ E+ ++ L QD +GNYV+Q+++E P + ++++ +G+ + LS KF+S
Sbjct: 1020 DQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFAS 1079
Query: 727 HVVEKCLKHFGES-RSQIVHELLSV---PH--FEQLLQDPFANYVIQCALSVTKGPLHAS 780
+VVEKC+ H + R+ ++ E+ ++ PH +++D +ANYV+Q + V +
Sbjct: 1080 NVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKI 1139
Query: 781 LIEAARRH-TNLRTSPYCKRIFSR 803
++ R H LR Y K I ++
Sbjct: 1140 VMHKIRPHIATLRKYTYGKHILAK 1163
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 126/254 (49%), Gaps = 13/254 (5%)
Query: 490 VRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNV 549
+RG++ S+A GCR +Q+ + + E+ H+++ + +Q GN++VQK +
Sbjct: 921 IRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE- 979
Query: 550 CTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDL 609
C + Q + ++ + GQ+ + + YG RV+Q+++E Q + +++ L L
Sbjct: 980 CVQPQSLQFIIDAFK--GQVFALSTHPYGCRVIQRILEHCLPDQTLPILEE-LHQHTEQL 1036
Query: 610 IKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHR 669
++D GN+V+Q L+ ED + + V ++ H+ V+++C+ H+ R
Sbjct: 1037 VQDQYGNYVIQHVLEHGRPEDKS-KIVAEIRGNVLV-LSQHKFASNVVEKCVTHASRTER 1094
Query: 670 DKLITEI--SKNGRHLA-----QDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQ 722
LI E+ +G H A +D + NYVVQ +I++ P ++ + + H L
Sbjct: 1095 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKY 1154
Query: 723 KFSSHVVEKCLKHF 736
+ H++ K K++
Sbjct: 1155 TYGKHILAKLEKYY 1168
>sp|Q2VB19|PUM1_CHICK Pumilio homolog 1 OS=Gallus gallus GN=PUM1 PE=2 SV=1
Length = 1189
Score = 179 bits (455), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 182/326 (55%), Gaps = 15/326 (4%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKL 546
L ++ G+I ++DQ+G RF+Q + T + Q++F+E++ +LM++ FGNY++QK
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 906
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQV--SLVKAALKP 604
+ EQ L + G ++ + L YG RV+QK +E + QQV +V+ L
Sbjct: 907 FEFGSLEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRE-LDG 962
Query: 605 GFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHS 664
L +KD NGNHV+Q+C++C+ + + DA ++TH +GC V+QR + H
Sbjct: 963 HVLKCVKDQNGNHVVQKCIECV--QPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHC 1020
Query: 665 IGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKF 724
+ ++ E+ ++ L QD +GNYV+Q+++E P + ++++ +G+ + LS KF
Sbjct: 1021 LPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF 1080
Query: 725 SSHVVEKCLKHFGES-RSQIVHELLSV---PH--FEQLLQDPFANYVIQCALSVTKGPLH 778
+S+VVEKC+ H + R+ ++ E+ ++ PH +++D +ANYV+Q + V +
Sbjct: 1081 ASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQR 1140
Query: 779 ASLIEAARRH-TNLRTSPYCKRIFSR 803
++ R H LR Y K I ++
Sbjct: 1141 KIVMHKIRPHIATLRKYTYGKHILAK 1166
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 131/257 (50%), Gaps = 17/257 (6%)
Query: 490 VRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFD---EVIDHIVELMMEQFGNYLVQKL 546
+RG++ S+A GCR +Q+ E D Q+I + E+ H+++ + +Q GN++VQK
Sbjct: 922 IRGHVLSLALQMYGCRVIQKAL-EFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKC 980
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
+ C + Q + ++ + GQ+ + + YG RV+Q+++E Q + +++ L
Sbjct: 981 IE-CVQPQSLQFIIDAFK--GQVFALSTHPYGCRVIQRILEHCLPEQTLPILEE-LHQHT 1036
Query: 607 LDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIG 666
L++D GN+V+Q L+ ED + + V ++ H+ V+++C+ H+
Sbjct: 1037 EQLVQDQYGNYVIQHVLEHGRPEDKS-KIVAEIRGNVLV-LSQHKFASNVVEKCVTHASR 1094
Query: 667 RHRDKLITEI--SKNGRHLA-----QDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHL 719
R LI E+ +G H A +D + NYVVQ +I++ P+ ++ + + H L
Sbjct: 1095 TERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATL 1154
Query: 720 STQKFSSHVVEKCLKHF 736
+ H++ K K++
Sbjct: 1155 RKYTYGKHILAKLEKYY 1171
>sp|Q80U78|PUM1_MOUSE Pumilio homolog 1 OS=Mus musculus GN=Pum1 PE=1 SV=2
Length = 1189
Score = 179 bits (454), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 183/326 (56%), Gaps = 15/326 (4%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKL 546
L ++ G+I ++DQ+G RF+Q + T + Q++F+E++ +LM++ FGNY++QK
Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKF 906
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQV--SLVKAALKP 604
+ EQ L + G ++ + L YG RV+QK +E + + QQV +V+ L
Sbjct: 907 FEFGSHEQK---LALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRE-LDG 962
Query: 605 GFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHS 664
L +KD NGNHV+Q+C++C+ + + DA ++TH +GC V+QR + H
Sbjct: 963 HVLKCVKDQNGNHVVQKCIECV--QPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHC 1020
Query: 665 IGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKF 724
+ ++ E+ ++ L QD +GNYV+Q+++E P + ++++ +G+ + LS KF
Sbjct: 1021 LPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF 1080
Query: 725 SSHVVEKCLKHFGES-RSQIVHELLSV---PH--FEQLLQDPFANYVIQCALSVTKGPLH 778
+S+VVEKC+ H + R+ ++ E+ ++ PH +++D +ANYV+Q + V +
Sbjct: 1081 ASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQR 1140
Query: 779 ASLIEAARRH-TNLRTSPYCKRIFSR 803
++ R H LR Y K I ++
Sbjct: 1141 KIVMHKIRPHIATLRKYTYGKHILAK 1166
Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 130/257 (50%), Gaps = 17/257 (6%)
Query: 490 VRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFD---EVIDHIVELMMEQFGNYLVQKL 546
+RG++ S+A GCR +Q+ E D Q+I + E+ H+++ + +Q GN++VQK
Sbjct: 922 IRGHVLSLALQMYGCRVIQKAL-EFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKC 980
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
+ C + Q + ++ + GQ+ + + YG RV+Q+++E Q + +++ L
Sbjct: 981 IE-CVQPQSLQFIIDAFK--GQVFALSTHPYGCRVIQRILEHCLPDQTLPILEE-LHQHT 1036
Query: 607 LDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIG 666
L++D GN+V+Q L+ ED + + V ++ H+ V+++C+ H+
Sbjct: 1037 EQLVQDQYGNYVIQHVLEHGRPEDKS-KIVAEIRGNVLV-LSQHKFASNVVEKCVTHASR 1094
Query: 667 RHRDKLITEI--SKNGRHLA-----QDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHL 719
R LI E+ +G H A +D + NYVVQ +I++ P ++ + + H L
Sbjct: 1095 TERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATL 1154
Query: 720 STQKFSSHVVEKCLKHF 736
+ H++ K K++
Sbjct: 1155 RKYTYGKHILAKLEKYY 1171
>sp|Q9ZW06|PUM2_ARATH Pumilio homolog 2 OS=Arabidopsis thaliana GN=APUM2 PE=1 SV=1
Length = 972
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 176/326 (53%), Gaps = 17/326 (5%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKL 546
LA++ G++ + DQ G RF+Q+ + T + ++++E++ H + LM + FGNY++QK
Sbjct: 632 LAEIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKF 691
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
Q + + + ++ + L YG RV+QK IE + Q++ +VK L
Sbjct: 692 FEHGLPPQRRELADKLFD---NVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKE-LDGHV 747
Query: 607 LDLIKDLNGNHVLQRCLQCLSNEDNE--VYLFFDAAAKFCVDIATHQHGCCVLQRCIAH- 663
+ ++D NGNHV+Q+C++C+ E+ E + FF V ++TH +GC V+QR + H
Sbjct: 748 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGN----VVTLSTHPYGCRVIQRVLEHC 803
Query: 664 SIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQK 723
+ K++ EI LAQD +GNYV+Q+++E P ++ + G V +S QK
Sbjct: 804 HDPDTQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQK 863
Query: 724 FSSHVVEKCLKHFG-ESRSQIVHELLSVPH----FEQLLQDPFANYVIQCALSVTKGPLH 778
F+S+VVEKCL G E R +V+E+L + +++D FANYV+Q L
Sbjct: 864 FASNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR 923
Query: 779 ASLIEAARRHTN-LRTSPYCKRIFSR 803
++ + H N L+ Y K I +R
Sbjct: 924 ELILGRIKVHLNALKKYTYGKHIVAR 949
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 13/258 (5%)
Query: 503 GCRFLQRVFDEGTFLDLQI-IFDEVIDHIVELMMEQFGNYLVQKLLNVCTEEQMTRILLM 561
GCR +Q+ E LD +I + E+ H++ + +Q GN++VQK + EE I +
Sbjct: 720 GCRVIQKAI-EVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEEN---IEFI 775
Query: 562 VTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQR 621
++ G +V + + YG RV+Q+++E S V + L +D GN+V+Q
Sbjct: 776 ISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIMSTISMLAQDQYGNYVIQH 835
Query: 622 CLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEI----- 676
L+ D + + A K V ++ + V+++C+ R+ L+ E+
Sbjct: 836 VLEH-GKPDERTVIIKELAGKI-VQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTD 893
Query: 677 -SKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEKCLKH 735
++ + + +D F NYVVQ ++E +L + K H L + H+V + K
Sbjct: 894 ENEPLQAMMKDQFANYVVQKVLETCDDQQRELILGRIKVHLNALKKYTYGKHIVARVEKL 953
Query: 736 FGESRSQIVHELLSVPHF 753
++ + L+ P
Sbjct: 954 VAAGERRMALQSLTQPQM 971
Score = 38.1 bits (87), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 62/129 (48%), Gaps = 19/129 (14%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVI------DHIVELMMEQFGN 540
+ ++ G I M++ + +++ G + + + +E++ + + +M +QF N
Sbjct: 849 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFAN 908
Query: 541 YLVQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLN-----TYGTRVVQKLIETLKTRQQV 595
Y+VQK+L C ++Q IL ++V LN TYG +V ++ + + ++
Sbjct: 909 YVVQKVLETCDDQQRELIL--------GRIKVHLNALKKYTYGKHIVARVEKLVAAGERR 960
Query: 596 SLVKAALKP 604
+++ +P
Sbjct: 961 MALQSLTQP 969
>sp|Q9SS47|PUM4_ARATH Pumilio homolog 4 OS=Arabidopsis thaliana GN=APUM4 PE=1 SV=2
Length = 1003
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 176/329 (53%), Gaps = 13/329 (3%)
Query: 482 SSSSSLADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNY 541
+ S L+++ G++ + DQ G RF+Q+ + T + IF E++ + LM + FGNY
Sbjct: 657 TRSLELSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNY 716
Query: 542 LVQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAA 601
++QK T +Q + VT G ++ + L YG RV+QK +E ++ QQ +VK
Sbjct: 717 VIQKFFEHGTTKQRKELAEQVT---GHVLALSLQMYGCRVIQKALEVVELEQQARMVKE- 772
Query: 602 LKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCI 661
L + + D NGNHV+Q+C++ L + + + + ++TH +GC V+QR +
Sbjct: 773 LDGSVMKCVHDQNGNHVIQKCIERLPQD--WIQFIISSFYGKVLALSTHPYGCRVIQRVL 830
Query: 662 AHSIGRHRDKLITE-ISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLS 720
H ++I E I + LAQD +GNYV+Q+II+ P + ++++ G V +S
Sbjct: 831 EHIDDIETQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMS 890
Query: 721 TQKFSSHVVEKCLKHFG-ESRSQIVHELLSVPH----FEQLLQDPFANYVIQCALSVTKG 775
QKF+S+VVEKCL G E R +V+E+L + +++DPF NYV+Q L
Sbjct: 891 QQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVLETCDD 950
Query: 776 PLHASLIEAARRHTN-LRTSPYCKRIFSR 803
A ++ + H N L+ Y K I +R
Sbjct: 951 QSLALILSRIKVHLNALKRYTYGKHIVAR 979
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
Query: 492 GYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVE------LMMEQFGNYLVQK 545
G I M++ + +++ G + Q++ +E++ + E +M + FGNY+VQK
Sbjct: 884 GQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQK 943
Query: 546 LLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRV---VQKLIETLKTRQQVSLVKAA 601
+L C ++ + IL + L R TYG + V+KLI T + R +S AA
Sbjct: 944 VLETCDDQSLALILSRIKVHLNALKRY---TYGKHIVARVEKLITTGERRIGLSSSLAA 999
>sp|P25822|PUM_DROME Maternal protein pumilio OS=Drosophila melanogaster GN=pum PE=1 SV=2
Length = 1533
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 176/323 (54%), Gaps = 14/323 (4%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKL 546
L D+ +I ++DQ+G RF+Q+ + T + Q++F E++ LM + FGNY++QK
Sbjct: 1109 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 1168
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
T EQ + + V G ++++ L YG RV+QK +E++ QQ +V L
Sbjct: 1169 FEFGTPEQKNTLGMQVK---GHVLQLALQMYGCRVIQKALESISPEQQQEIVHE-LDGHV 1224
Query: 607 LDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCV-DIATHQHGCCVLQRCIAHSI 665
L +KD NGNHV+Q+C++C+ D F A K V ++TH +GC V+QR + H
Sbjct: 1225 LKCVKDQNGNHVVQKCIECV---DPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT 1281
Query: 666 GRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFS 725
++ E+ ++ L QD +GNYV+Q+++E + L++ +G + LS KF+
Sbjct: 1282 AEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFA 1341
Query: 726 SHVVEKCLKHF--GESRSQIVHELLSVPH--FEQLLQDPFANYVIQCALSVTKGPLHASL 781
S+VVEKC+ H GE R+ ++ E+ + +++D +ANYV+Q + V++ L
Sbjct: 1342 SNVVEKCVTHATRGE-RTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKL 1400
Query: 782 IEAARRH-TNLRTSPYCKRIFSR 803
+ R H LR Y K I ++
Sbjct: 1401 MTKIRPHMAALRKYTYGKHINAK 1423
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 490 VRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNV 549
V+G++ +A GCR +Q+ + + Q I E+ H+++ + +Q GN++VQK +
Sbjct: 1184 VKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE- 1242
Query: 550 CTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDL 609
C + + ++ + GQ+ + + YG RV+Q+++E T +Q + + L L
Sbjct: 1243 CVDPVALQFIINAFK--GQVYSLSTHPYGCRVIQRILEHC-TAEQTTPILDELHEHTEQL 1299
Query: 610 IKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHR 669
I+D GN+V+Q L+ ED + L K V ++ H+ V+++C+ H+ R
Sbjct: 1300 IQDQYGNYVIQHVLEHGKQEDKSI-LINSVRGKVLV-LSQHKFASNVVEKCVTHATRGER 1357
Query: 670 DKLITEI---SKNGRH-LAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFS 725
LI E+ + N H + +D + NYVVQ +I++ P+ L+++ + H L +
Sbjct: 1358 TGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYG 1417
Query: 726 SHVVEKCLKHF 736
H+ K K++
Sbjct: 1418 KHINAKLEKYY 1428
>sp|Q9ZW07|PUM1_ARATH Pumilio homolog 1 OS=Arabidopsis thaliana GN=APUM1 PE=1 SV=1
Length = 968
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 175/326 (53%), Gaps = 17/326 (5%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKL 546
L+++ G++ + DQ G RF+Q+ + T + ++++E++ + LM + FGNY++QK
Sbjct: 628 LSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKF 687
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
Q + + + ++ + L YG RV+QK IE + Q++ +VK L
Sbjct: 688 FEHGLPPQRRELAEKLFD---HVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKE-LDGHV 743
Query: 607 LDLIKDLNGNHVLQRCLQCLSNEDNE--VYLFFDAAAKFCVDIATHQHGCCVLQRCIAH- 663
+ ++D NGNHV+Q+C++C+ E+ E + FF V ++TH +GC V+QR + H
Sbjct: 744 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFG----HVVTLSTHPYGCRVIQRVLEHC 799
Query: 664 SIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQK 723
+ K++ EI LAQD +GNYVVQ+++E P ++ + G V +S QK
Sbjct: 800 HDPDTQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQK 859
Query: 724 FSSHVVEKCLKHFG-ESRSQIVHELLSVPH----FEQLLQDPFANYVIQCALSVTKGPLH 778
F+S+VVEKCL G E R +V+E+L + +++D FANYV+Q L
Sbjct: 860 FASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR 919
Query: 779 ASLIEAARRH-TNLRTSPYCKRIFSR 803
++ + H T L+ Y K + +R
Sbjct: 920 ELILTRIKVHLTALKKYTYGKHVVAR 945
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 13/258 (5%)
Query: 503 GCRFLQRVFDEGTFLDLQI-IFDEVIDHIVELMMEQFGNYLVQKLLNVCTEEQMTRILLM 561
GCR +Q+ E LD +I + E+ H++ + +Q GN++VQK + EE I +
Sbjct: 716 GCRVIQKAI-EVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEEN---IEFI 771
Query: 562 VTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQR 621
++ G +V + + YG RV+Q+++E S V + L +D GN+V+Q
Sbjct: 772 ISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILSTVSMLAQDQYGNYVVQH 831
Query: 622 CLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEI----- 676
L+ D + + A K V ++ + V+++C+ R+ L+ E+
Sbjct: 832 VLEH-GKPDERTVIIKELAGKI-VQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTD 889
Query: 677 -SKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEKCLKH 735
++ + + +D F NYVVQ ++E +L++ K H L + HVV + K
Sbjct: 890 ENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLTALKKYTYGKHVVARIEKL 949
Query: 736 FGESRSQIVHELLSVPHF 753
++ + L+ P
Sbjct: 950 VAAGERRMALQSLTQPQM 967
Score = 40.4 bits (93), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVI------DHIVELMMEQFGN 540
+ ++ G I M++ + +++ G + +++ +E++ + + +M +QF N
Sbjct: 845 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 904
Query: 541 YLVQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKA 600
Y+VQK+L C ++Q IL + L + TYG VV ++ + + ++ +++
Sbjct: 905 YVVQKVLETCDDQQRELILTRIKV---HLTALKKYTYGKHVVARIEKLVAAGERRMALQS 961
Query: 601 ALKP 604
+P
Sbjct: 962 LTQP 965
>sp|Q9ZW02|PUM3_ARATH Pumilio homolog 3 OS=Arabidopsis thaliana GN=APUM3 PE=1 SV=1
Length = 964
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 174/326 (53%), Gaps = 17/326 (5%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKL 546
L+++ G++ + DQ G RF+Q+ + T + ++++E++ + LM + FGNY++QK
Sbjct: 624 LSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPKALALMTDVFGNYVIQKF 683
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
Q + + + ++ + L YG RV+QK IE + Q++ +VK L
Sbjct: 684 FEHGLPPQRRELGEKLID---NVLPLSLQMYGCRVIQKAIEVVDLDQKIQMVKE-LDGHV 739
Query: 607 LDLIKDLNGNHVLQRCLQCLSNEDNE--VYLFFDAAAKFCVDIATHQHGCCVLQRCIAHS 664
+ ++D NGNHV+Q+C++C+ E+ E + FF V ++TH +GC V+QR + H
Sbjct: 740 MRCVRDQNGNHVVQKCIECVPEENIEFIISTFFG----HVVTLSTHPYGCRVIQRVLEHC 795
Query: 665 IGRH-RDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQK 723
+ K++ EI L QD +GNYVVQ+++E P ++ + G V +S QK
Sbjct: 796 HNPDTQSKVMEEILSTVSMLTQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQK 855
Query: 724 FSSHVVEKCLKHFG-ESRSQIVHELLSVPH----FEQLLQDPFANYVIQCALSVTKGPLH 778
F+S+VVEKCL G E R +V+E+L + +++D FANYV+Q L
Sbjct: 856 FASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR 915
Query: 779 ASLIEAARRHTN-LRTSPYCKRIFSR 803
++ + H N L+ Y K I +R
Sbjct: 916 ELILTRIKVHLNALKKYTYGKHIVAR 941
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 117/256 (45%), Gaps = 13/256 (5%)
Query: 503 GCRFLQRVFDEGTFLDLQI-IFDEVIDHIVELMMEQFGNYLVQKLLNVCTEEQMTRILLM 561
GCR +Q+ E LD +I + E+ H++ + +Q GN++VQK + EE I +
Sbjct: 712 GCRVIQKAI-EVVDLDQKIQMVKELDGHVMRCVRDQNGNHVVQKCIECVPEEN---IEFI 767
Query: 562 VTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQR 621
++ G +V + + YG RV+Q+++E S V + L +D GN+V+Q
Sbjct: 768 ISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEILSTVSMLTQDQYGNYVVQH 827
Query: 622 CLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEI----- 676
L+ D + + A K V ++ + V+++C+ R+ L+ E+
Sbjct: 828 VLEH-GKPDERTVIIKELAGKI-VQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTD 885
Query: 677 -SKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEKCLKH 735
++ + + +D F NYVVQ ++E +L++ K H L + H+V + K
Sbjct: 886 ENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKL 945
Query: 736 FGESRSQIVHELLSVP 751
++ + L P
Sbjct: 946 VAAGERRMALQSLPQP 961
Score = 39.3 bits (90), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVI------DHIVELMMEQFGN 540
+ ++ G I M++ + +++ G + +++ +E++ + + +M +QF N
Sbjct: 841 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 900
Query: 541 YLVQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLN-----TYGTRVVQKLIETLKTRQQV 595
Y+VQK+L C ++Q IL ++V LN TYG +V ++ + + ++
Sbjct: 901 YVVQKVLETCDDQQRELILTR--------IKVHLNALKKYTYGKHIVARVEKLVAAGERR 952
Query: 596 SLVKAALKP 604
+++ +P
Sbjct: 953 MALQSLPQP 961
>sp|O81465|PUM15_ARATH Pumilio homolog 15 OS=Arabidopsis thaliana GN=APUM15 PE=3 SV=1
Length = 477
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 164/303 (54%), Gaps = 21/303 (6%)
Query: 489 DVRGYIY-------SMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNY 541
D GY+Y S AKD LQ V +G + IFD +I H+ ELM++ +G+
Sbjct: 143 DAYGYMYGIRNTLLSRAKDGIESHMLQYVIAKGLKETIDKIFDNLISHVCELMLDYYGHK 202
Query: 542 LVQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAA 601
+ +KL+ CT+EQ+TR+L +V EEP + VR+C++T+GT +Q L+ +L + +Q+S
Sbjct: 203 VFRKLMEKCTDEQITRVLDIVLEEPFEFVRLCVHTHGTHAIQGLMRSLCSEEQISRFMET 262
Query: 602 LKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCI 661
L L L KD+ + V+ C S L + + C +A Q+GCC+L++ I
Sbjct: 263 LCYVSLLLTKDVIAHRVILFCFNQFSPSHTRYLL--EVIVQNCYQVAIDQNGCCMLKKLI 320
Query: 662 AHSIGRHRDKLITEISKNGRHLAQDPFG----------NYVVQYIIELKIPSVSANLLSQ 711
S RD LI EI L + +G NYVVQY++ LK V++ L
Sbjct: 321 RQSSRELRDPLIKEIISIAVRLCGNCYGTLTPKSLLVRNYVVQYLLRLKDYEVTSALSKH 380
Query: 712 FKGHYVHLSTQKFSSHVVEKCLKHFGESRSQIVHELLSVPHFEQLLQDPFANYVIQCALS 771
G+YV LS K+ SHVV+KCL+ S +I+ ELLS + LL DP+ +YVIQ A
Sbjct: 381 LDGNYVQLSYDKYGSHVVQKCLESREFSSRRIIAELLS--DIDSLLVDPYGDYVIQTAWI 438
Query: 772 VTK 774
V++
Sbjct: 439 VSE 441
>sp|Q9LJX4|PUM5_ARATH Pumilio homolog 5 OS=Arabidopsis thaliana GN=APUM5 PE=1 SV=2
Length = 961
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 173/324 (53%), Gaps = 13/324 (4%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKL 546
L+D+ G + + DQ+G RF+Q+ + + + +F EV+ +LM + FGNY++QK
Sbjct: 626 LSDIAGRVVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKF 685
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
+ T Q ++ + GQ+V + L YG RV+QK +E + Q+ L++ L
Sbjct: 686 IEHGTPAQREELVKQLA---GQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRE-LDGNV 741
Query: 607 LDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAH-SI 665
L ++D NGNHV+Q+C++ + + A ++TH +GC V+QR + H S
Sbjct: 742 LKCVRDQNGNHVIQKCIESMPA--GRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSD 799
Query: 666 GRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFS 725
+I EI ++ LA D +GNYV Q+++E P ++ + G+ V +S K++
Sbjct: 800 DEETHCIIDEILESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYA 859
Query: 726 SHVVEKCLKHFGES-RSQIVHELLSVP----HFEQLLQDPFANYVIQCALSVTKGPLHAS 780
S+VVEKCL+H + R ++ E++ H +++D FANYV+Q L ++K
Sbjct: 860 SNVVEKCLEHADSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQREI 919
Query: 781 LIEAARRH-TNLRTSPYCKRIFSR 803
L++ + H +LR Y K I +R
Sbjct: 920 LVQRMKIHLQSLRKYTYGKHIVAR 943
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 13/252 (5%)
Query: 492 GYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNVCT 551
G + S++ GCR +Q+ + + E+ ++++ + +Q GN+++QK C
Sbjct: 703 GQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNGNHVIQK----CI 758
Query: 552 EEQMT-RILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLI 610
E RI ++ GQ+ + + YG RV+Q+++E ++ + + L
Sbjct: 759 ESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILESAFALA 818
Query: 611 KDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRD 670
D GN+V Q L+ + +E + V ++ H++ V+++C+ H+ R+
Sbjct: 819 HDQYGNYVTQHVLE--RGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADSTERE 876
Query: 671 KLITEI---SKNGRHL---AQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKF 724
LI EI S+ HL +D F NYVVQ ++E+ L+ + K H L +
Sbjct: 877 FLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQREILVQRMKIHLQSLRKYTY 936
Query: 725 SSHVVEKCLKHF 736
H+V + + F
Sbjct: 937 GKHIVARFEQLF 948
Score = 38.5 bits (88), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 695 YIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEKCLKHFG-ESRSQIVHELLSVPHF 753
++ ELK P+ LS G V S + S +++ L+H E ++ + E+L P
Sbjct: 612 FLDELKSPNARKLELSDIAGRVVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVL--PQA 669
Query: 754 EQLLQDPFANYVIQ 767
+L+ D F NYVIQ
Sbjct: 670 SKLMTDVFGNYVIQ 683
>sp|Q9FMH4|PUM13_ARATH Putative pumilio homolog 13 OS=Arabidopsis thaliana GN=APUM13 PE=3
SV=1
Length = 527
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 178/334 (53%), Gaps = 10/334 (2%)
Query: 476 CPLHLLSSSSSLADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMM 535
C + ++SS+ + RG +S+A D+ + L++ GT + +IFD +I I ELM+
Sbjct: 195 CTYNQDQAASSMENGRGSYFSIATDRVWSKELEKTIFVGTKETIDMIFDGLIVGICELMV 254
Query: 536 EQFGNYLVQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTR--Q 593
+ FGN +V+ L+ C+ EQ+ I+ +VT + V +C N GT +Q L+ ++ R
Sbjct: 255 DPFGNDVVKLLIGKCSSEQIILIVDVVTRHISKFVNICFNPIGTLAIQVLLTSIHERANN 314
Query: 594 QVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHG 653
Q+ + A+ L L ++ N +V+ C + ++ ++ + ++ C IA Q+G
Sbjct: 315 QIPRIMDAISSVALQLTRNTNAKYVILACFRMFTS--SQCRRLLEVVSQHCYQIAIDQNG 372
Query: 654 CCVLQRCI-AHSIGRH--RDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLS 710
CC+LQ+C + H R +LI+E+ ++ L + GNYVVQY++EL + L++
Sbjct: 373 CCLLQQCFDKERVPNHEIRQRLISEVIEHALKLCLNCHGNYVVQYVVELDNQHETDLLVN 432
Query: 711 QFKGHYVHLSTQKFSSHVVEKCLKHFGESRSQIVHELLSVPHFEQLLQDPFANYVIQCAL 770
+ +Y HL+ K+ SHVV+K LK G IV +LL + LL DPF NYVIQ A
Sbjct: 433 KLLRNYAHLARNKYGSHVVQKLLKLRGIDSKLIVVDLLR--GIDTLLLDPFGNYVIQTAW 490
Query: 771 SVTKGPLHASLIEAARRHTNL-RTSPYCKRIFSR 803
V+K + L R+ L R + + +I +
Sbjct: 491 FVSKEDVRQMLRYYIERNIRLMRCNKFGNKILEK 524
>sp|Q9C5E7|PUM6_ARATH Pumilio homolog 6, chloroplastic OS=Arabidopsis thaliana GN=APUM6
PE=1 SV=1
Length = 861
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 166/324 (51%), Gaps = 13/324 (4%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKL 546
L+D+ G+I + DQ+G RF+Q+ + + +F E++ H +LM + FGNY++QK
Sbjct: 530 LSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKF 589
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
Q + + GQ+V + L YG RV+QK ++ ++ Q+V L + L
Sbjct: 590 FEYGNSTQRKELADQLM---GQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARE-LDGQV 645
Query: 607 LDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIG 666
+ ++D NGNHV+Q+C++ + + +V A ++ H +GC V+QR +
Sbjct: 646 MRCVRDQNGNHVIQKCIENIPAD--KVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSH 703
Query: 667 RHRDKLITE-ISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFS 725
H+ + ITE I ++ L++D +GNYV Q+++E + + GH V LS KF+
Sbjct: 704 DHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFA 763
Query: 726 SHVVEKCLKHFGESRSQIVHELLSVP-----HFEQLLQDPFANYVIQCALSVTKGPLHAS 780
S+V+EKCL++ G ++ + ++ P +++D + NYV+Q +
Sbjct: 764 SNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLT 823
Query: 781 LIEAARRHTN-LRTSPYCKRIFSR 803
L R H + L+ Y K I SR
Sbjct: 824 LFSRVRMHASALKKYTYGKHIVSR 847
>sp|O94462|PUF3_SCHPO mRNA-binding protein puf3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=puf3 PE=2 SV=4
Length = 732
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 168/326 (51%), Gaps = 18/326 (5%)
Query: 459 AYDGVICDNGQSLMDIRCPLHLLSSSS----SLADVRGYIYSMAKDQNGCRFLQRVFDEG 514
A +I NGQ + L+L ++ L+D+ G + + DQ+G RF+Q+
Sbjct: 362 ANPSLINQNGQEFLQQSRVLYLFHANKQRHFELSDILGNVVLFSTDQHGSRFIQQKLATA 421
Query: 515 TFLDLQIIFDEVID-HIVELMMEQFGNYLVQKLLNVCTEEQMTRILLMVTEEPGQLVRVC 573
T + + +F E+ ++LMM+ FGNY+VQK E+Q +++++ G + +
Sbjct: 422 TEEEREAVFQEIASTSCLQLMMDIFGNYVVQKYFEFGNEKQKQ---ILLSQIKGHVFSLS 478
Query: 574 LNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEV 633
L YG RVVQK IE + QV L++ L LD + D NGNHV+Q+ ++C+ + +
Sbjct: 479 LQMYGCRVVQKAIEYISPEHQVQLIQE-LDGHVLDCVCDQNGNHVIQKAIECI--DTGHL 535
Query: 634 YLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVV 693
A ++ H +GC V+QR I H R +I E+ + L QD +GNYVV
Sbjct: 536 QFILRALRPQIHVLSAHPYGCRVIQRAIEH-CHSERKLIIEELLPHILKLTQDQYGNYVV 594
Query: 694 QYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEKCLKHFGE-SRSQIVHELLSVPH 752
Q+I+ S + H + LS KF+S+VVE+C+ + + R +I+++++S
Sbjct: 595 QHILRTGSESDKKYIFDLMIDHLLFLSCHKFASNVVERCISYISDVDRRRILNKIISEKA 654
Query: 753 -----FEQLLQDPFANYVIQCALSVT 773
+++D +ANYVIQ L +
Sbjct: 655 ENCSILMLMMKDKYANYVIQKLLDAS 680
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 125/244 (51%), Gaps = 17/244 (6%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKL 546
L+ ++G+++S++ GCR +Q+ + + + E+ H+++ + +Q GN+++QK
Sbjct: 467 LSQIKGHVFSLSLQMYGCRVVQKAIEYISPEHQVQLIQELDGHVLDCVCDQNGNHVIQKA 526
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
+ + IL + Q+ + + YG RV+Q+ IE + ++ L+ L P
Sbjct: 527 IECIDTGHLQFILRALRP---QIHVLSAHPYGCRVIQRAIEHCHSERK--LIIEELLPHI 581
Query: 607 LDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAH--S 664
L L +D GN+V+Q L+ S D + FD + ++ H+ V++RCI++
Sbjct: 582 LKLTQDQYGNYVVQHILRTGSESDKK--YIFDLMIDHLLFLSCHKFASNVVERCISYISD 639
Query: 665 IGRHR--DKLITEISKNGRHLA---QDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHL 719
+ R R +K+I+E ++N L +D + NYV+Q +++ P +LL + Y H+
Sbjct: 640 VDRRRILNKIISEKAENCSILMLMMKDKYANYVIQKLLDAS-PEEERDLLISYI--YPHI 696
Query: 720 STQK 723
S K
Sbjct: 697 SVLK 700
>sp|Q07807|PUF3_YEAST mRNA-binding protein PUF3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PUF3 PE=1 SV=1
Length = 879
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 165/320 (51%), Gaps = 24/320 (7%)
Query: 487 LADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKL 546
L D+ G+ KDQ+G RF+QR + ++IF+E+ D +EL + FGNY++QK
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 547 LNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
++ Q +V + G + ++ L Y RV+QK +E + + Q++ LV L
Sbjct: 596 FEFGSKIQKN---TLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELV-LELSDSV 651
Query: 607 LDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIG 666
L +IKD NGNHV+Q+ ++ + E ++ + ++TH +GC V+QR +
Sbjct: 652 LQMIKDQNGNHVIQKAIETIPIE--KLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSS 709
Query: 667 RHRDKLITEISKNGRHLAQDPFGNYVVQYIIE------LKIPSVSANLLSQFKGHYVHLS 720
++ ++ E+ +L QD +GNYV+QY+++ ++ + ++ + V S
Sbjct: 710 EDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYS 769
Query: 721 TQKFSSHVVEKCLKHFGESRSQ-IVHELLSVPHFEQL-----------LQDPFANYVIQC 768
KF+S+VVEK + + +++ I+ ++L L ++D FANYVIQ
Sbjct: 770 KHKFASNVVEKSILYGSKNQKDLIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQK 829
Query: 769 ALSVTKGPLHASLIEAARRH 788
++V++G ++ A R +
Sbjct: 830 LVNVSEGEGKKLIVIAIRAY 849
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 12/172 (6%)
Query: 636 FFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQY 695
F + +FC D QHG +QR +A S ++ + EI + L+ D FGNYV+Q
Sbjct: 539 IFGHSLEFCKD----QHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQK 594
Query: 696 IIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEKCLKHF-GESRSQIVHELLSVPHFE 754
E L+ QFKG+ LS Q ++ V++K L++ R ++V EL
Sbjct: 595 FFEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSD--SVL 652
Query: 755 QLLQDPFANYVIQCA---LSVTKGPLHASLIEAARRHTNLRTSPYCKRIFSR 803
Q+++D N+VIQ A + + K P S + H L T Y R+ R
Sbjct: 653 QMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYH--LSTHSYGCRVIQR 702
>sp|Q4PSD1|PUM14_ARATH Pumilio homolog 14 OS=Arabidopsis thaliana GN=APUM14 PE=2 SV=1
Length = 518
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 148/291 (50%), Gaps = 10/291 (3%)
Query: 496 SMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNVCTEEQM 555
+ AKD+ L +GT + I++ +I I ELM++ +G+ +VQ L+ C+ EQ+
Sbjct: 207 AFAKDKEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQI 266
Query: 556 TRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETL--KTRQQVSLVKAALKPGFLDLIKDL 613
+++ +VT++ Q V +C+++ GT +Q L+ + + + Q+ + ++ L L K
Sbjct: 267 VQLVDIVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVDVVRTVALQLSK-- 324
Query: 614 NGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRH---RD 670
NH + L C L + + C IA QHGCC+LQ C + R
Sbjct: 325 -SNHAIFVILACFRLFPLHCRLLLELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLEIRQ 383
Query: 671 KLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVE 730
+LI E N L + +GNYVVQYI+EL + L+ Q G+Y HL+ K+ SH V+
Sbjct: 384 RLIMEAIANALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGSHAVQ 443
Query: 731 KCLKHFGESRSQIVHELLSVPHFEQLLQDPFANYVIQCALSVTKGPLHASL 781
K LK IV +LL + LL DPF NYVIQ A V+K + L
Sbjct: 444 KLLKLRWIDSRVIVIDLLR--EIDTLLLDPFGNYVIQTAWFVSKDDVRRML 492
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 495 YSMAKDQNGCRFLQRVFDEGTFLDLQI---IFDEVIDHIVELMMEQFGNYLVQKLLNVCT 551
+ +A DQ+GC LQ F++ +L+I + E I + + L + +GNY+VQ ++
Sbjct: 355 HQIAIDQHGCCLLQLCFNKDRVPNLEIRQRLIMEAIANALRLCLNCYGNYVVQYIV---- 410
Query: 552 EEQMTRILL--MVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDL 609
E R L+ +V + G + N YG+ VQKL++ +V ++ L L
Sbjct: 411 -ELNNRYLIDALVRQLIGNYAHLARNKYGSHAVQKLLKLRWIDSRVIVID--LLREIDTL 467
Query: 610 IKDLNGNHVLQ 620
+ D GN+V+Q
Sbjct: 468 LLDPFGNYVIQ 478
>sp|P39016|MPT5_YEAST Suppressor protein MPT5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MPT5 PE=1 SV=2
Length = 859
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 144/250 (57%), Gaps = 17/250 (6%)
Query: 497 MAKDQNGCRFLQRVFDEGTFLDL--QIIFDEVIDHIVELMMEQFGNYLVQKLLNVCTEEQ 554
+A DQ GCRFLQ+ + + ++ ++++++ ++L+++ FGNYLVQKL + T EQ
Sbjct: 218 LATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYLTAEQ 277
Query: 555 MTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGF------LD 608
T LL+ T P + ++ +N YGTR +QK+I+T+ Q+ L+ F +
Sbjct: 278 KT--LLIQTIYPN-VFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQVVT 334
Query: 609 LIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAK--FCVDIATHQHGCCVLQRCIAHSIG 666
LI DLNGNHV+Q+C+ S ++ DA + + I+TH+HGCCVLQ+ ++
Sbjct: 335 LINDLNGNHVIQKCIFKFS--PSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCTL 392
Query: 667 RHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPS--VSANLLSQFKGHYVHLSTQKF 724
+ K+ +I + L D FGNY++Q+++++K + A L ++ LS KF
Sbjct: 393 QQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQLSCLKF 452
Query: 725 SSHVVEKCLK 734
SS+VVEK +K
Sbjct: 453 SSNVVEKFIK 462
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 17/250 (6%)
Query: 570 VRVCLNTYGTRVVQKLIETLKTRQQV-SLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSN 628
+++ + +G R +QK +ET V L+ +KP FLDLI D GN+++Q+ L+
Sbjct: 216 IKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYLTA 275
Query: 629 EDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHR-DKLITEISKNGRHLAQ-- 685
E + L I+ +Q+G LQ+ I + D +I S+ + Q
Sbjct: 276 E--QKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQVV 333
Query: 686 ----DPFGNYVVQYIIELKIPSVSANLLSQF--KGHYVHLSTQKFSSHVVEKCLKHFGES 739
D GN+V+Q I PS ++ + + + +ST K V++K L +
Sbjct: 334 TLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVC--T 391
Query: 740 RSQIVHELLSVPHF-EQLLQDPFANYVIQCALSVTKGPLHASLIEAARRHTNLRTSPYCK 798
QI + + F L+ D F NY+IQ L + + + L E R +N C
Sbjct: 392 LQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYL-LAELFNRLSNELCQLSCL 450
Query: 799 RIFSRNISKK 808
+ FS N+ +K
Sbjct: 451 K-FSSNVVEK 459
Score = 34.3 bits (77), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 716 YVHLSTQKFSSHVVEKCLKHFGESRSQIVHELLS---VPHFEQLLQDPFANYVIQ 767
Y+ L+T +F ++K L+ S S +V +L+ P F L+ DPF NY++Q
Sbjct: 215 YIKLATDQFGCRFLQKKLE--TPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQ 267
>sp|Q09312|FBF2_CAEEL Fem-3 mRNA-binding factor 2 OS=Caenorhabditis elegans GN=fbf-2 PE=1
SV=1
Length = 632
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 161/338 (47%), Gaps = 53/338 (15%)
Query: 481 LSSSSSLADV--RGYIYSMAKDQNGCRFLQRVFDEGTFLDLQI--IFDEVI---DHIVEL 533
+ S SL++V G + A D+ GC+FL++ +G+ Q +F++VI D ++L
Sbjct: 179 MRSRLSLSEVLDSGDLMKFAVDKTGCQFLEKAV-KGSLTSYQKFQLFEQVIGRKDDFLKL 237
Query: 534 MMEQFGNYLVQKLLNVCT----------EEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQ 583
FGNYLVQ ++ + +E++ + Q+ +CL+ + RV+Q
Sbjct: 238 STNIFGNYLVQSVIGISLATNDDGYTKRQEKLKNFI------SSQMTDMCLDKFACRVIQ 291
Query: 584 KLIETLKTRQQVSLVKAALKPGFLDLI-KDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAK 642
++ + LV+A + L I D N NHV+Q+ + + ++ E + F A +
Sbjct: 292 SSLQNMDLSLACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPE 351
Query: 643 FCVDIATHQHGCCVLQRCI----AHSIG------------RHRDKLITEISKNGRHLAQD 686
I + ++GC V+Q I A S+ R +L+T ++ + LA +
Sbjct: 352 HLRQICSDKYGCRVVQTIIEKLTADSMNVDLTSAAQNLRERALQRLMTSVTNRCQELATN 411
Query: 687 PFGNYVVQYIIELKIPSVSANLLSQ--FKGHYVHLSTQKFSSHVVEKCLKHFG-ESRSQI 743
+ NY++Q+I+ +V + + + + LS +KF+SHVVEK H E +++
Sbjct: 412 EYANYIIQHIVSNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAFLHAPLELLAEM 471
Query: 744 VHELLS--VPH-------FEQLLQDPFANYVIQCALSV 772
+ E+ +PH + ++ F NYV+QC L++
Sbjct: 472 MDEIFDGYIPHPDTGKDALDIMMFHQFGNYVVQCMLTI 509
Score = 40.0 bits (92), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 530 IVELMMEQFGNYLVQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETL 589
++ + ++Q N+++QK++ V + I+ V P L ++C + YG RVVQ +IE L
Sbjct: 315 LIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVAT-PEHLRQICSDKYGCRVVQTIIEKL 373
Query: 590 KT-RQQVSLVKAA----------LKPGFLDLIKDLNGNHVLQRCLQ-CLSNEDNEVY--- 634
V L AA L + ++L N +Q +SN+D VY
Sbjct: 374 TADSMNVDLTSAAQNLRERALQRLMTSVTNRCQELATNEYANYIIQHIVSNDDLAVYREC 433
Query: 635 LFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEI-------SKNGRH----L 683
+ + + ++ + V+++ H+ +++ EI G+ +
Sbjct: 434 IIEKCLMRNLLSLSQEKFASHVVEKAFLHAPLELLAEMMDEIFDGYIPHPDTGKDALDIM 493
Query: 684 AQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVH 718
FGNYVVQ ++ + +VS ++ +G Y H
Sbjct: 494 MFHQFGNYVVQCMLTICCDAVSGRRQTK-EGGYDH 527
>sp|Q9N5M6|FBF1_CAEEL Fem-3 mRNA-binding factor 1 OS=Caenorhabditis elegans GN=fbf-1 PE=1
SV=1
Length = 614
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 161/338 (47%), Gaps = 53/338 (15%)
Query: 481 LSSSSSLADV--RGYIYSMAKDQNGCRFLQRVFDEGTFLDLQI--IFDEVI---DHIVEL 533
+ S SL++V G + A D+ GC+FL++ +G+ Q +F++VI D ++L
Sbjct: 177 MRSRLSLSEVLDSGDLMKFAVDKTGCQFLEKAV-KGSLTSYQKFQLFEQVIGRKDDFLKL 235
Query: 534 MMEQFGNYLVQKLL----------NVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQ 583
FGNY VQ+++ N+ +E++ + Q+ +CL+ + RV+Q
Sbjct: 236 STNIFGNYFVQEIIGMSLTTYDDDNIKRQEKLKNFI------SSQMTDMCLDKFACRVIQ 289
Query: 584 KLIETLKTRQQVSLVKAALKPGFLDLI-KDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAK 642
++ + LV+A + L I D N NHV+Q+ + + ++ E + F A +
Sbjct: 290 SSLQNMDLSLACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPE 349
Query: 643 FCVDIATHQHGCCVLQRCI----AHSIG------------RHRDKLITEISKNGRHLAQD 686
I ++GC V+Q I A SI R +L+T ++ + LA +
Sbjct: 350 HLRQICFDKYGCRVVQTIIEKLTADSINVDLTSAAQHLRERALQRLMTSVTNRCQELATN 409
Query: 687 PFGNYVVQYIIELKIPSVSANLLSQ--FKGHYVHLSTQKFSSHVVEKCLKHFG-ESRSQI 743
+ NY++Q+I+ +V + + + + LS +KF+SHVVEK H E +++
Sbjct: 410 EYANYIIQHIVSNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAFLHAPMELLAEM 469
Query: 744 VHELLS--VPH-------FEQLLQDPFANYVIQCALSV 772
+ E+ +PH + ++ F NYV+QC L++
Sbjct: 470 MDEIFDGYMPHPGTGKDALDIMMFHQFGNYVVQCMLTI 507
Score = 41.2 bits (95), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 530 IVELMMEQFGNYLVQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETL 589
++ + ++Q N+++QK++ V + I+ V P L ++C + YG RVVQ +IE L
Sbjct: 313 LIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVAT-PEHLRQICFDKYGCRVVQTIIEKL 371
Query: 590 KTRQ-QVSLVKAA----------LKPGFLDLIKDLNGNHVLQRCLQ-CLSNEDNEVY--- 634
V L AA L + ++L N +Q +SN+D VY
Sbjct: 372 TADSINVDLTSAAQHLRERALQRLMTSVTNRCQELATNEYANYIIQHIVSNDDLAVYREC 431
Query: 635 LFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEI----------SKNGRHLA 684
+ + + ++ + V+++ H+ +++ EI K+ +
Sbjct: 432 IIEKCLMRNLLSLSQEKFASHVVEKAFLHAPMELLAEMMDEIFDGYMPHPGTGKDALDIM 491
Query: 685 Q-DPFGNYVVQYIIELKIPSVSANLLSQFKGHYVH 718
FGNYVVQ ++ + +VS ++ +G Y H
Sbjct: 492 MFHQFGNYVVQCMLTICCDAVSGRRQTK-EGSYDH 525
>sp|Q9LXC5|PUM21_ARATH Putative pumilio homolog 21 OS=Arabidopsis thaliana GN=APUM21 PE=3
SV=1
Length = 517
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 113/242 (46%), Gaps = 10/242 (4%)
Query: 552 EEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIK 611
E + +I +T + + N YG++ ++ L ++ L+ A+ F L+
Sbjct: 246 ESHLFKIGSALTTTKRIFLHLATNQYGSQALRILFR--RSPSLDHLLFCAVDTNFFLLMS 303
Query: 612 DLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDK 671
D G ++ ++ + E + ++ + +A + GC L + G +RD
Sbjct: 304 DKYGRGLIIPAIRAVDKTKKES--LYKLTYEYTLHLARLETGCLALNNVLQEIRGIYRDL 361
Query: 672 LITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEK 731
+ ++ N L+ DP+G +VVQ I+ L+ P + + + +G + L+ ++ S+VVEK
Sbjct: 362 IFECVANNADWLSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFRLAMERQGSYVVEK 421
Query: 732 CLKHFGESRSQIVHELL-SVPHFEQLLQDPFANYVIQCALSVTKG----PLHASLIEAAR 786
CLK +R Q++ E + + ++ D F N+V+Q AL V K PL +E R
Sbjct: 422 CLKS-DFARDQVLEEFRGNAKEWVRMTTDKFGNFVVQSALRVMKEKEMRPLLREFVEKLR 480
Query: 787 RH 788
H
Sbjct: 481 PH 482
Score = 40.0 bits (92), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 493 YIYSMAKDQNGCRFLQRVFDE--GTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNVC 550
Y +A+ + GC L V E G + DL IF+ V ++ L + +G ++VQ +L +
Sbjct: 333 YTLHLARLETGCLALNNVLQEIRGIYRDL--IFECVANNADWLSFDPYGTHVVQNILILQ 390
Query: 551 TEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLI 610
T I + G R+ + G+ VV+K +++ R QV ++ +
Sbjct: 391 NPVATTAIAERLR---GSFFRLAMERQGSYVVEKCLKSDFARDQVLEEFRGNAKEWVRMT 447
Query: 611 KDLNGNHVLQRCLQCLSNED 630
D GN V+Q L+ + ++
Sbjct: 448 TDKFGNFVVQSALRVMKEKE 467
>sp|Q9XI17|PUM20_ARATH Putative pumilio homolog 20 OS=Arabidopsis thaliana GN=APUM20 PE=5
SV=2
Length = 332
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 110/216 (50%), Gaps = 10/216 (4%)
Query: 561 MVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQ 620
++T +P + + N G++ +QKL+ KT +L AA+ FL +I D ++V++
Sbjct: 86 LLTSDPDYFLMIARNMNGSKRIQKLLG--KTDDVDALFAAAILRRFLHIITDKYASYVVR 143
Query: 621 RCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNG 680
R + + + ++ + IA +HG L I + +R+KL I+
Sbjct: 144 RGMTVFDKKKKKA--MYEHILHYASHIARDKHGNLALNDIITDA---YRNKLFDVIAHKA 198
Query: 681 RHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEKCLKHFGESR 740
L+ D +GN+V+Q +++L N++ +GH+V LS QK+ S+VV+ L+ ES
Sbjct: 199 LVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQKYGSYVVDVLLET-KESM 257
Query: 741 SQIVHELLSVP--HFEQLLQDPFANYVIQCALSVTK 774
+V EL+ +L ++ + N+++ AL VT+
Sbjct: 258 VVVVEELMECEGDMLMRLARNEYGNFLVCKALRVTQ 293
>sp|Q9FIE9|PUM16_ARATH Putative pumilio homolog 16 OS=Arabidopsis thaliana GN=APUM16 PE=3
SV=2
Length = 332
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 114/224 (50%), Gaps = 7/224 (3%)
Query: 561 MVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQ 620
++T + + + N G++ +QKL+ + V +A ++ F+ ++ D ++V
Sbjct: 79 LMTSDCDYFMVITTNKNGSKTLQKLM-GMSDDMDVFFFEAIMRL-FIHVMTDKYASYVTI 136
Query: 621 RCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAH-SIGRHRDKLITEISKN 679
+ ++ + E L +D ++ +A Q+GC L I +RD+L+ ++ N
Sbjct: 137 QGMRVFQQDKRE--LMYDQILRYACFLAGDQYGCIALNEIITDLDDPYYRDQLLDIVANN 194
Query: 680 GRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEKCLKHFGES 739
L+ D +GN+VVQ++++L+ + N+ + G+ V LS +K+ S++VE+ L+
Sbjct: 195 ALLLSNDAYGNFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLEAGDVP 254
Query: 740 RSQIVHELLS--VPHFEQLLQDPFANYVIQCALSVTKGPLHASL 781
+ +V +LL+ +L + + N+V+ AL +T L A L
Sbjct: 255 MATVVLDLLACKTEMLIRLARSEYGNFVVCKALELTNEILTADL 298
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 522 IFDEVIDHIVELMMEQFGNYLVQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRV 581
I D++ + VEL +++G+Y+V++LL T +L ++ + L+R+ + YG V
Sbjct: 223 IADKLCGYCVELSFKKYGSYIVERLLEAGDVPMATVVLDLLACKTEMLIRLARSEYGNFV 282
Query: 582 VQKLIE 587
V K +E
Sbjct: 283 VCKALE 288
>sp|O74438|MCP2_SCHPO Meiotic coiled-coil protein 2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mcp2 PE=4 SV=1
Length = 703
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 145/317 (45%), Gaps = 20/317 (6%)
Query: 497 MAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNVCTEEQMT 556
++ DQ FLQ+ ++ Q I D +I I LM+ +FGN+LVQ+ T Q+
Sbjct: 369 VSNDQQSSIFLQQKLKISSYDMKQNIVDSIISQIHPLMLNRFGNFLVQRCFEHGTAPQIR 428
Query: 557 RILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDL---IKDL 613
+ M + G ++++ + +G VVQK I+ + + + L A + FL + I
Sbjct: 429 Q---MGSAMLGNMLKLATDPFGCHVVQKAIDNVT--EDIKL--AMMDELFLTIDVTIMHH 481
Query: 614 NGNHVLQRCL--QCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDK 671
HV Q+ Q N + +A ++A ++G V+Q + + + + +
Sbjct: 482 YACHVWQKLFETQWYEYPVNVMNRVNNALRGKWHEVAVGENGSLVVQNMFENCVEKDKRE 541
Query: 672 LITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEK 731
I EI + +A+ +GN+VVQ+++E ++ V S +F+S V+EK
Sbjct: 542 CIEEIIFHLDGIARGQWGNWVVQHMVENGQGEDLKRVIDALLNRAVEFSIDQFASKVIEK 601
Query: 732 CLKHFGESRSQIVHELLSVPHFEQLLQ-------DPFANYVIQCALSVTKGPLHASLIEA 784
+K ++ + + ++ ++ Q D + NY+IQ + + + +I
Sbjct: 602 AIKSGPKNFISLYLKQITNARVDRTRQPLIDIASDQYGNYLIQQIIQLGQPAEKNLVITH 661
Query: 785 ARRH-TNLRTSPYCKRI 800
++H +LR S Y +++
Sbjct: 662 IKKHMVSLRGSKYGQKV 678
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 123/287 (42%), Gaps = 53/287 (18%)
Query: 494 IYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNVCTEE 553
I+ + ++ G +QR F+ GT ++ + ++ ++++L + FG ++VQK ++ TE+
Sbjct: 402 IHPLMLNRFGNFLVQRCFEHGTAPQIRQMGSAMLGNMLKLATDPFGCHVVQKAIDNVTED 461
Query: 554 QMTRILLMVTEEPGQLVRVC-LNTYGTRVVQKLIETLKTRQQVSL---VKAALKPGFLDL 609
I L + +E + V ++ Y V QKL ET V++ V AL+ + ++
Sbjct: 462 ----IKLAMMDELFLTIDVTIMHHYACHVWQKLFETQWYEYPVNVMNRVNNALRGKWHEV 517
Query: 610 IKDLNGNHVLQRCLQCLSNEDN-----EVYLFFDAAAKFCVDIATHQHGC---------- 654
NG+ V+Q + +D E+ D A+ QH
Sbjct: 518 AVGENGSLVVQNMFENCVEKDKRECIEEIIFHLDGIARGQWGNWVVQHMVENGQGEDLKR 577
Query: 655 ---CVLQRCIAHSIGRHRDKLITEISKNGRH------------------------LAQDP 687
+L R + SI + K+I + K+G +A D
Sbjct: 578 VIDALLNRAVEFSIDQFASKVIEKAIKSGPKNFISLYLKQITNARVDRTRQPLIDIASDQ 637
Query: 688 FGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFS---SHVVEK 731
+GNY++Q II+L P+ +++ K H V L K+ +++VEK
Sbjct: 638 YGNYLIQQIIQLGQPAEKNLVITHIKKHMVSLRGSKYGQKVAYLVEK 684
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 490 VRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNV 549
+RG + +A +NG +Q +F+ D + +E+I H+ + Q+GN++VQ ++
Sbjct: 510 LRGKWHEVAVGENGSLVVQNMFENCVEKDKRECIEEIIFHLDGIARGQWGNWVVQHMVEN 569
Query: 550 CTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDL 609
E + R++ + + V ++ + ++V++K I K+ K F+ L
Sbjct: 570 GQGEDLKRVIDALL---NRAVEFSIDQFASKVIEKAI------------KSGPK-NFISL 613
Query: 610 IKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHR 669
N + R Q L +DIA+ Q+G ++Q+ I +
Sbjct: 614 YLKQITNARVDRTRQPL------------------IDIASDQYGNYLIQQIIQLGQPAEK 655
Query: 670 DKLITEISKNGRHLAQDPFGNYVVQYIIE 698
+ +IT I K+ L +G V Y++E
Sbjct: 656 NLVITHIKKHMVSLRGSKYGQKVA-YLVE 683
>sp|Q9C8B8|PUM17_ARATH Putative pumilio homolog 17 OS=Arabidopsis thaliana GN=APUM17 PE=5
SV=2
Length = 332
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 7/223 (3%)
Query: 562 VTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQR 621
+T + + + N G++ +QKL+ V A+ F+ ++ D ++V +
Sbjct: 80 LTSDSDYFMVITRNKNGSKSLQKLMRMSDDMDVFFFV--AIMRLFIHVMIDKYASYVAIQ 137
Query: 622 CLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAH-SIGRHRDKLITEISKNG 680
++ + E L +D ++ + +A Q+GC L I +RD+L+ +S N
Sbjct: 138 GMRIFKQDKRE--LMYDHILRYALFLARDQYGCIALNEIIKELDDPYYRDELMDIVSNNA 195
Query: 681 RHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEKCLKHFGESR 740
L+ D +GN+VVQ++++L + N+ + G+ V LS +K+ S++VE+ L+
Sbjct: 196 LLLSNDAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSFKKYGSYIVERLLEVRDIPM 255
Query: 741 SQIVHELLS--VPHFEQLLQDPFANYVIQCALSVTKGPLHASL 781
+ IV +LL+ +L + N+V+ L +T L A L
Sbjct: 256 ATIVLDLLACKTEMLIRLARSENGNFVVCKLLELTNDILTADL 298
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 493 YIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHI----VELMMEQFGNYLVQKLLN 548
Y +A+DQ GC L + E LD DE++D + + L + +GN++VQ +L
Sbjct: 157 YALFLARDQYGCIALNEIIKE---LDDPYYRDELMDIVSNNALLLSNDAYGNFVVQHVLK 213
Query: 549 V----CTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIET--LKTRQQVSLVKAAL 602
+ CT ++ G V + YG+ +V++L+E + V + A
Sbjct: 214 LHDSRCTGNIADKLC-------GYCVELSFKKYGSYIVERLLEVRDIPMATIVLDLLACK 266
Query: 603 KPGFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKF 643
+ L + NGN V+ + L+ L+N+ LF+ K
Sbjct: 267 TEMLIRLARSENGNFVVCKLLE-LTNDILTADLFYSLVNKL 306
>sp|Q9LVG3|PUM18_ARATH Pumilio homolog 18 OS=Arabidopsis thaliana GN=APUM18 PE=2 SV=1
Length = 327
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 6/247 (2%)
Query: 530 IVELMMEQFGNYLVQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETL 589
+ LM + G +++++ + ++ R+ ++T + + + +G+R VQKL+
Sbjct: 45 LFNLMTDGDGVSYFKEMISNSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLG-- 102
Query: 590 KTRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIAT 649
K+ + AA+ FL + D ++V R + + ++ +D+A
Sbjct: 103 KSDDVDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKA--LYERILYHALDLAC 160
Query: 650 HQHGCCVLQRCIAHSIG-RHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANL 708
QHGC L I + +RD+L+ ++ N L+ D GN+VVQ+++ L N+
Sbjct: 161 DQHGCIALNDIITDADDPYYRDQLLELVASNALRLSNDASGNFVVQHVLTLYDSRCIHNI 220
Query: 709 LSQFKGHYVHLSTQKFSSHVVEKCLKHFGESRSQIVHEL-LSVPHFEQLLQDPFANYVIQ 767
G + LS +K+ S++VEK L+ +V L +L ++ F N+V+
Sbjct: 221 AVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVV 280
Query: 768 CALSVTK 774
AL TK
Sbjct: 281 KALRFTK 287
>sp|Q9P789|YN8E_SCHPO Pumilio domain-containing protein P35G2.14 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBP35G2.14 PE=1 SV=2
Length = 1065
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 123/267 (46%), Gaps = 18/267 (6%)
Query: 479 HLLSSSSSLADVRGYIYSMAK-------DQNGCRFLQRVFDEG--TFLDLQIIFDEVIDH 529
+L+++ L D I S++K + R +++ D G T +++ I +D
Sbjct: 718 QILNAACELTDFAAQIPSISKAFSSRRLNAPKLRQVRKRIDNGLCTQEEVEDIAINWLDE 777
Query: 530 IVELMMEQFGNYLVQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETL 589
+ +L + GN +VQKL + C++ +L + L ++ ++ GT QK+++
Sbjct: 778 VSDLSSDHLGNTVVQKLFDYCSDPVKEMMLERIAP---HLAQIGIHKNGTWAAQKIVDVA 834
Query: 590 KTRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIAT 649
T Q+ L+ L+P L D GN+V+Q CL+ + ++ ++F +F V IA
Sbjct: 835 STEAQMRLIAKHLQPYIPLLFADQFGNYVVQTCLKFGAPMND--FVFEAILNQFWV-IAQ 891
Query: 650 HQHGCCVLQRCIAHS--IGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIE-LKIPSVSA 706
++G ++ C+ R + I+ HLA + G ++ Y++E + P +
Sbjct: 892 SRYGSRAVRACLESPDVTEEQRVLVAAAITVYSVHLAMNGNGTLLLTYLVENMNYPHIPI 951
Query: 707 NLLSQFKGHYVHLSTQKFSSHVVEKCL 733
L +F V + T + + + + K +
Sbjct: 952 LLTRRFVQDIVRVCTHRLAYNSLLKII 978
Score = 33.5 bits (75), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 683 LAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEKCLK-HFGESRS 741
L+ D GN VVQ + + V +L + H + K + +K + E++
Sbjct: 781 LSSDHLGNTVVQKLFDYCSDPVKEMMLERIAPHLAQIGIHKNGTWAAQKIVDVASTEAQM 840
Query: 742 QIVHELLSVPHFEQLLQDPFANYVIQCALSVTKGPLHASLIEA 784
+++ + L P+ L D F NYV+Q L P++ + EA
Sbjct: 841 RLIAKHLQ-PYIPLLFADQFGNYVVQTCLKF-GAPMNDFVFEA 881
>sp|Q9LSS8|PUM19_ARATH Putative pumilio homolog 19 OS=Arabidopsis thaliana GN=APUM19 PE=3
SV=2
Length = 327
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 6/247 (2%)
Query: 530 IVELMMEQFGNYLVQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETL 589
+ LM + G +++++ + ++ R+ ++T + + + +G+R VQKL+
Sbjct: 45 LFNLMTDGDGVSYFKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLG-- 102
Query: 590 KTRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIAT 649
K+ + AA+ FL + D ++V R + + ++ +D+A
Sbjct: 103 KSDDVDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKA--LYERILYHALDLAC 160
Query: 650 HQHGCCVLQRCIAHSIG-RHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANL 708
QHGC L I + +RD+L+ + N L+ D GN+VVQ+++ L N+
Sbjct: 161 DQHGCIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNI 220
Query: 709 LSQFKGHYVHLSTQKFSSHVVEKCLKHFGESRSQIVHEL-LSVPHFEQLLQDPFANYVIQ 767
G + LS +K+ S++VEK L+ +V L +L ++ F N+V+
Sbjct: 221 AVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVV 280
Query: 768 CALSVTK 774
AL TK
Sbjct: 281 KALRFTK 287
>sp|O60059|YG58_SCHPO Pumilio domain-containing protein C56F2.08c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC56F2.08c PE=1
SV=1
Length = 661
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 118/256 (46%), Gaps = 13/256 (5%)
Query: 500 DQNGCRFLQRVFDEGTFL--DLQIIFDEVIDHIVELMMEQFGNYLVQKLLNVCTEEQMTR 557
+ + R +++ D G + ++++I ++D + EL + GN +VQK C++
Sbjct: 164 EASKLREIRKNIDSGFYTQEEIEVIARSMLDDVAELSSDYLGNTVVQKFFEYCSDPIKEA 223
Query: 558 ILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNH 617
+L + L + ++ GT QK+I+ T +Q+ L+ L+P L D GN+
Sbjct: 224 MLERIAP---YLAAIGIHKNGTWAAQKIIDVASTEKQMDLIVKHLRPYTALLYFDQFGNY 280
Query: 618 VLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCI--AHSIGRHRDKLITE 675
V Q CL+ ++ F+ A+ C +I + G ++ C+ ++ + ++
Sbjct: 281 VAQCCLRFKYPKNT---FLFEVMARHCCEIGQSRFGARAIRACLENENATFEQQALVVAS 337
Query: 676 ISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLS-TQKFSSHVVEKCL- 733
I N LA + G ++ ++++ LL+ ++H + T K +S ++ K +
Sbjct: 338 IIINSHLLATNSNGMLLLTWLLDNSFFRNRHRLLAIHLATHLHTTCTHKLASTLIFKLIN 397
Query: 734 -KHFGESRSQIVHELL 748
K ESR+ ++ L
Sbjct: 398 NKQEPESRNLLLKNLF 413
>sp|Q10238|MPF1_SCHPO Meiotic PUF family protein 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mpf1 PE=4 SV=1
Length = 581
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 143/334 (42%), Gaps = 20/334 (5%)
Query: 481 LSSSSSLADVRGYIYSMA--KDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQF 538
L S++++ + I + DQ LQ+ D + + ++ V LM +F
Sbjct: 245 LQYSATISKWKAMIEQIIFQNDQAASLSLQQQLKNEDIEDNINLINTILPFSVTLMKNKF 304
Query: 539 GNYLVQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLV 598
GN+L+QK TE Q+ + + +L ++ +G+ V+QK +E R +L+
Sbjct: 305 GNFLIQKCFEYSTEAQLQSFSYFLKKHVKEL---SIDAFGSHVLQKSLEIYPERFTNNLI 361
Query: 599 KAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKF----CVDIATHQHGC 654
+ ++ L++ + HV Q+ + + + V FD K + ++ + G
Sbjct: 362 EELIECLPATLMQR-HSCHVWQKFFE--TRRKSLVDGIFDHFNKKMQGKWLQVSVSEMGS 418
Query: 655 CVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKG 714
V+Q + + + + EI N + +GN+V+Q+IIE +L+
Sbjct: 419 LVVQTIFENCKEKDKRTCLDEIINNMDQIICGQWGNWVIQHIIEHGSEPDKQRILNSLLK 478
Query: 715 HYVHLSTQKFSSHVVEKCLK-----HFGESRSQIVHELLSVP--HFEQLLQDPFANYVIQ 767
ST +++S VVE+ L+ F +I +P +++ + + NY++Q
Sbjct: 479 EVESYSTNRYASKVVERALRVCHVTFFDRYVKEITTPQNELPTIFLQEIASNQYGNYIVQ 538
Query: 768 CALSVTKGPLHASLIEAARRH-TNLRTSPYCKRI 800
L V + E ++H +LR Y +RI
Sbjct: 539 YLLQVATPSQINLMAEHLKKHMVSLRGHKYGQRI 572
>sp|P47135|JSN1_YEAST Protein JSN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=JSN1 PE=1 SV=1
Length = 1091
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 16/253 (6%)
Query: 500 DQNGCRFLQRVFDEGTFLDLQI--IFDEVIDHIVELMMEQFGNYLVQKLLNVCTEEQMTR 557
D R L++ D F DL+I + ++D + EL + GN +VQKL E +
Sbjct: 590 DPPKLRELRKSIDSNAFSDLEIEQLAIAMLDELPELSSDYLGNTIVQKLF-----EHSSD 644
Query: 558 IL--LMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIKDLNG 615
I+ +M+ + L + ++ GT QK+I T +Q+ V +K LI D G
Sbjct: 645 IIKDIMLRKTSKYLTSMGVHKNGTWACQKMITMAHTPRQIMQVTQGVKDYCTPLINDQFG 704
Query: 616 NHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCI-AHSIGRHRDKLIT 674
N+V+Q C+ N+ ++F A F V I +++G ++ C+ AH I ++
Sbjct: 705 NYVIQ-CVLKFGFPWNQ-FIFESIIANFWV-IVQNRYGARAVRACLEAHDIVTPEQSIVL 761
Query: 675 E--ISKNGRHLAQDPFGNYVVQYIIELKI-PSVSANLLSQFKGHYVHLSTQKFSSHVVEK 731
I +L+ + G +V + ++ + P+ + L + V L + +S + K
Sbjct: 762 SAMIVTYAEYLSTNSNGALLVTWFLDTSVLPNRHSILAPRLTKRIVELCGHRLASLTILK 821
Query: 732 CLKHFGESRSQIV 744
L + G+ ++ +
Sbjct: 822 VLNYRGDDNARKI 834
>sp|Q12221|PUF2_YEAST mRNA-binding protein PUF2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PUF2 PE=1 SV=1
Length = 1075
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 121/272 (44%), Gaps = 34/272 (12%)
Query: 500 DQNGCRFLQRVFDEGTF--LDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNVCTEEQMTR 557
D R L++ FD + ++++ + ++D + EL + GN ++QKL E +
Sbjct: 549 DAPKLRELRKQFDSNSLSTIEMEQLAIVMLDQLPELSSDYLGNTVIQKLF-----ENSSN 603
Query: 558 IL--LMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIKDLNG 615
I+ +M+ + L + ++ GT V QK+I+ T +Q++LV + + L D G
Sbjct: 604 IIRDIMLRKCNKYLTSMGVHKNGTWVCQKIIKMANTPRQINLVTSGVSDYCTPLFNDQFG 663
Query: 616 NHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRDKLITE 675
N+V+Q L+ ++ F++ I +++G ++ C+ D +IT+
Sbjct: 664 NYVIQGILKFGFPWNS---FIFESVLSHFWTIVQNRYGSRAVRACL------EADSIITQ 714
Query: 676 ---------ISKNGRHLAQDPFGNYVVQYIIEL-KIPSVSANLLSQF-KGHYVHLSTQKF 724
I +LA D G ++ ++++ +P+ + L + + V L K
Sbjct: 715 CQLLTITSLIIVLSPYLATDTNGTLLITWLLDTCTLPNKNLILCDKLVNKNLVKLCCHKL 774
Query: 725 SSHVVEKCLKHFGE-----SRSQIVHELLSVP 751
S V K L G S+++I+H + P
Sbjct: 775 GSLTVLKILNLRGGEEEALSKNKIIHAIFDGP 806
>sp|Q9FGE7|PUM26_ARATH Pumilio homolog 26 OS=Arabidopsis thaliana GN=APUM26 PE=2 SV=1
Length = 187
Score = 40.8 bits (94), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 606 FLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSI 665
F++ +K + G +Q L LS E + V+L + D+ T ++ R I
Sbjct: 48 FVEFVKTIRGFLSVQTALG-LSGEIDTVFL--QVIKGWFPDLITETFSFLIVVRIINLFN 104
Query: 666 GRHRDK----LITEISKNGRHLAQDPF-GNYVVQYIIELKIPSVSANLLSQFKGHYVHLS 720
R K ++ I N +L ++P G +V+ I ++ P + + + HYV LS
Sbjct: 105 KRANSKVYPDILRRIGNNALYLTRNPLRGICLVEKAINVRDPDCTVFIALKLHSHYVELS 164
Query: 721 TQKFSSHVVEKCLKHFGES 739
++ S++VEK L GES
Sbjct: 165 FEELGSNIVEKLLS-VGES 182
>sp|Q9UU76|PUF6_SCHPO Pumilio homology domain family member 6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=puf6 PE=1 SV=1
Length = 642
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 656 VLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGH 715
V+Q C+ + R+ + E++ + L + P+G Y+ I + P + +L + G+
Sbjct: 178 VVQTCVKFGSKQQRETICAELAGSYVDLCKSPYGKYLAIKIFKYGTPKMKEVILGEMYGN 237
Query: 716 YVHLSTQKFSSHVVEKCLKHF 736
V + + +++VVE + F
Sbjct: 238 VVKMIRHREAAYVVEDAFREF 258
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 128/309 (41%), Gaps = 19/309 (6%)
Query: 488 ADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLL 547
A++ G + K G ++F GT ++I E+ ++V+++ + Y+V+
Sbjct: 196 AELAGSYVDLCKSPYGKYLAIKIFKYGTPKMKEVILGEMYGNVVKMIRHREAAYVVEDAF 255
Query: 548 NVCTEEQMTRILLMVTEEPGQLVRVCLN-TYGTRVVQKLIETLKTRQQVSLVKAALKPGF 606
T Q R L + E G +V + T + + LI+ + R S+++ K
Sbjct: 256 REFTNLQQQRAL--ICEFYGPEFQVFKDRTQDIHIDKLLIDHPEKRP--SIMQNLWKTIE 311
Query: 607 LDLIKDLNGNHVLQRCLQCLSN--EDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHS 664
+ K G ++ R + N + NE + + + + G V + A +
Sbjct: 312 GSIAKGSIGFTMVHRAMLEFINHADSNEAKELLNLTKELIYEFVHTRDGSQVAMKLFALA 371
Query: 665 IGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLL--SQFKGHYVHLSTQ 722
+ R ++ + A+D +G+ VV ++ ++ L ++F+G + LS
Sbjct: 372 NAKDRKVMLKSLRPYLIETAKDSYGHLVVVAALDCTDDTIMTGKLLQAEFEGELLKLSAD 431
Query: 723 KFSSHVVEKCL------KHFGESRSQIVHELLSVPHFEQLLQDPFANYVIQCALSVTKGP 776
KF+ ++ L ++F + +++ L S+ + +DP V + L T GP
Sbjct: 432 KFARRILLYVLVGWEDARYFSKENRELLRSLDSLKA-KTSKKDPI---VRRNELKATIGP 487
Query: 777 LHASLIEAA 785
L SLI A
Sbjct: 488 LLISLISKA 496
>sp|C5P9D1|NOP9_COCP7 Nucleolar protein 9 OS=Coccidioides posadasii (strain C735) GN=NOP9
PE=3 SV=2
Length = 722
Score = 38.9 bits (89), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 49/259 (18%)
Query: 476 CPLHLLSSSSSLADVRGYIYSMAKDQNGCRFLQRVFD--EGTFLDLQIIFDEVI-DHIVE 532
P L ++ S + G Y D G R L+ +F G F ++I+ ++ + I
Sbjct: 348 IPDDSLENTESATFINGLFY----DPVGSRLLETLFQHVPGKFF--KMIYKSIVRERIGS 401
Query: 533 LMMEQFGNYLVQKLLNVCTEEQMTRIL-LMVTEEPGQLVRVCLNTYGTRVVQKLIE---- 587
L + +Y+ ++L ++E + + ++ E P + R LN V++ LIE
Sbjct: 402 LSRNEIASYVAVRVLERLSKEDLQATMDTILREVPSMVERSRLN-----VIKALIERGAV 456
Query: 588 ----------TLKT---RQQVSLVKAALK------PGFLDLIKD--------LNGNHVLQ 620
TLK+ + VS +K LK P D K L+G+ + Q
Sbjct: 457 RGANLTPLANTLKSAYGEEAVSRLKKILKLDEASEPSKEDPTKSATNLPSQQLHGSLLAQ 516
Query: 621 RCLQCLSNEDNEVYL-FFDAAAKFCVDIATHQHGCCVLQRCI--AHSIGRHRDKLITEIS 677
L+ + F +A F +DIA G VLQ + + + G+ R ++I + S
Sbjct: 517 AMLRVPGPLAEMIRSSFLEATVPFLLDIAKSPTGSRVLQESLIFSKATGQFRRQIIPKFS 576
Query: 678 KNGRHLAQDPFGNYVVQYI 696
+ LA + G++VV +
Sbjct: 577 GHLCELALNTSGSHVVDIL 595
>sp|Q86U38|NOP9_HUMAN Nucleolar protein 9 OS=Homo sapiens GN=NOP9 PE=1 SV=1
Length = 636
Score = 37.7 bits (86), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 683 LAQDPFGNYVVQYIIELKIPSVSANL----LSQFKGHYVHLSTQKFSSHVVEKCLKHFG- 737
LAQ P G++V+ I L PSV+ L L KG YV L+ + S V++
Sbjct: 517 LAQSPAGSHVLDAI--LTSPSVTRKLRRRVLQNLKGQYVALACSRHGSRVLDAIWSGAAL 574
Query: 738 ESRSQIVHELLSVPHFEQLLQDPFANYV 765
+R +I EL ++L++DPF ++V
Sbjct: 575 RARKEIAAELGE--QNQELIRDPFGHHV 600
Score = 35.4 bits (80), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 40/93 (43%)
Query: 604 PGFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAH 663
P L L + G+HVL L S V +A +HG VL +
Sbjct: 512 PQLLSLAQSPAGSHVLDAILTSPSVTRKLRRRVLQNLKGQYVALACSRHGSRVLDAIWSG 571
Query: 664 SIGRHRDKLITEISKNGRHLAQDPFGNYVVQYI 696
+ R R ++ E+ + + L +DPFG++V + +
Sbjct: 572 AALRARKEIAAELGEQNQELIRDPFGHHVARNV 604
>sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3
Length = 952
Score = 37.0 bits (84), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 22/140 (15%)
Query: 668 HRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSH 727
HR+K+++ +++ F V +++ + I S +ANL S F + + +
Sbjct: 634 HREKVVSNLAR---------FVVLVWCFVVLVLIQSYTANLTSFFTVKLLQPTVTNWKDL 684
Query: 728 VVEKCLKHFGESRSQIVHELLSVPHFEQLLQDPFANYVIQCALSVTKGPLHASLIEAARR 787
+ K K+ G R V ELL F++ PF + ++C + G + AS E A
Sbjct: 685 I--KFNKNIGYQRGTFVRELLKSQGFDESQLKPFGS-AVECDELFSNGTITASFDEVA-- 739
Query: 788 HTNLRTSPYCKRIFSRNISK 807
Y K I S+N SK
Sbjct: 740 --------YIKVILSQNSSK 751
>sp|A1D6V7|NOP9_NEOFI Nucleolar protein 9 OS=Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / FGSC A1164 / NRRL 181) GN=nop9 PE=3 SV=1
Length = 699
Score = 36.6 bits (83), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 37/293 (12%)
Query: 490 VRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVI-DHIVELMMEQFGNYLVQKLLN 548
VRG +Y D G R L+ + + ++ +I D I L Y+V + L
Sbjct: 366 VRGLLY----DPVGSRLLETIIKSMPGKLFKSLYKNIIRDRIGSLARNTTAGYVVLRTLE 421
Query: 549 VCTEEQMTRIL-LMVTEEPGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFL 607
++ + + L++ E PG + R L + + L+ + T+ + AL+ +
Sbjct: 422 RLGKDDLQDAMELIIPEIPGLIERSRLIVPKVLIERCLVRGVDTKP----LSDALESAY- 476
Query: 608 DLIKDLNGNHVLQRCLQ---CLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHS 664
D N L++ L+ S ED+E A HG + Q + S
Sbjct: 477 ----DKNPARRLEQMLKLEPAASEEDSEEKQ--KQTGNNQTAAAEKLHGSLLAQTMLTAS 530
Query: 665 ---IGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQF----KGHYV 717
G L+ + +++ LA+DP + V+Q L P+ ++ QF GH V
Sbjct: 531 GPVSGLIYSSLLAQSAESLLRLAKDPTASRVLQQA--LTTPTSTSQFRRQFTTRFSGHLV 588
Query: 718 HLSTQKFSSHVVE---KCLKHFGESRSQIVHELLSVPHFEQL-LQDPFANYVI 766
L+ SHVV+ K + ++ ELL E+L L+D F +
Sbjct: 589 ELALDSSGSHVVDALWPATKDLFFVKERMAQELLK----EELSLRDSFVGRAV 637
>sp|B6K1Y8|NOP9_SCHJY Nucleolar protein 9 OS=Schizosaccharomyces japonicus (strain yFS275
/ FY16936) GN=nop9 PE=3 SV=1
Length = 641
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 670 DKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVV 729
D + E+S + + FG+ V++ + L N G Y+ ++ F S V+
Sbjct: 84 DSIFAEVSGKELQVLNNVFGSKVLEKVFTLASSQQIKNFFGALNGSYLQITQTTFGSFVL 143
Query: 730 EKCLKHFG 737
EK L H G
Sbjct: 144 EKLLSHMG 151
>sp|A6S374|NOP9_BOTFB Nucleolar protein 9 OS=Botryotinia fuckeliana (strain B05.10)
GN=NOP9 PE=3 SV=1
Length = 791
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 692 VVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFSSHVVEKCLKHFGESRSQIVHEL 747
+++ +I L P L SQF G++ HL + +F+SH C F +S S + EL
Sbjct: 135 LMERLILLSTPQQKKKLFSQFAGNFPHLVSHRFASHC---CETLFIQSASIVTEEL 187
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 300,095,257
Number of Sequences: 539616
Number of extensions: 12857740
Number of successful extensions: 49730
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 48046
Number of HSP's gapped (non-prelim): 971
length of query: 808
length of database: 191,569,459
effective HSP length: 126
effective length of query: 682
effective length of database: 123,577,843
effective search space: 84280088926
effective search space used: 84280088926
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)