Query 038006
Match_columns 808
No_of_seqs 233 out of 1561
Neff 5.4
Searched_HMMs 13730
Date Mon Mar 25 10:51:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038006.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/038006hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1m8za_ a.118.1.8 (A:) Pumilio 100.0 1.1E-52 7.8E-57 449.8 24.1 313 486-804 18-337 (339)
2 d1m8za_ a.118.1.8 (A:) Pumilio 100.0 1.1E-37 7.8E-42 333.0 18.4 305 431-769 25-337 (339)
3 d1wvka_ g.82.1.1 (A:) Expresse 11.2 37 0.0027 27.8 1.2 8 69-76 5-12 (86)
4 d1b3ua_ a.118.1.2 (A:) Constan 9.0 7.7E+02 0.056 23.9 11.9 12 752-763 523-534 (588)
5 d1j2jb_ a.7.8.1 (B:) ADP-ribos 7.1 1.9E+02 0.014 20.2 3.4 19 503-521 7-25 (41)
6 d1l9la_ a.64.1.1 (A:) Granulys 6.4 2.3E+02 0.017 21.3 4.0 47 507-553 14-67 (74)
7 d1sska_ b.148.1.1 (A:) Nucleoc 6.3 1.3E+02 0.0094 26.9 2.7 27 69-100 8-34 (158)
8 d1of9a_ a.64.1.4 (A:) Ameobapo 5.8 2.3E+02 0.017 21.2 3.8 48 507-554 15-69 (77)
9 d2clyb1 f.53.1.1 (B:4-123) ATP 5.4 3.4E+02 0.025 22.8 4.9 43 2-44 73-118 (120)
10 d1b3ua_ a.118.1.2 (A:) Constan 4.8 1.2E+03 0.089 22.2 12.6 278 506-786 285-583 (588)
No 1
>d1m8za_ a.118.1.8 (A:) Pumilio 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.1e-52 Score=449.81 Aligned_cols=313 Identities=30% Similarity=0.573 Sum_probs=297.9
Q ss_pred hHHHHhhhHHHHhhcCCccHHHHhhhccCCHHHHHHHHHHHhcchhhhccccchhHHHHHHHhhCCHHHHHHHHHHHhhc
Q 038006 486 SLADVRGYIYSMAKDQNGCRFLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNVCTEEQMTRILLMVTEE 565 (808)
Q Consensus 486 iLeei~GkI~eLA~Dq~GSRVLQklLE~~t~Eq~~~I~~eL~~~~~~L~~DqfGNHVVQKLLe~~seeqr~~Ii~iL~~l 565 (808)
.|++++|+++++|+||+|||+||++|+.++++++..|++++.+++.+||+|+|||||+||++++++++++..| +..+
T Consensus 18 ~l~~~~g~~~~~~~~q~gSr~lQ~~l~~~~~~~~~~I~~~l~~~~~~L~~~~~gn~vvqkll~~~~~~~~~~i---~~~l 94 (339)
T d1m8za_ 18 QLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL---AERI 94 (339)
T ss_dssp CGGGGTTCHHHHHTSHHHHHHHHHHHHHCCHHHHHHHHHHHGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHH---HHHH
T ss_pred cHHHHHhHHHHHhcCchhhHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhCcccchhHHHHHhhCCHHHHHHH---HHHH
Confidence 4778999999999999999999999999999999999999999999999999999999999999999998877 6677
Q ss_pred cchhhhhhcCcccchhHhHHHhhcCcHHHHHHHHHHhccCccccccccCCchHHHHHHhhccccchhHHHHHHHHHHHHH
Q 038006 566 PGQLVRVCLNTYGTRVVQKLIETLKTRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCV 645 (808)
Q Consensus 566 ~g~iveLa~hkyGcrVVQKLLE~ls~~qqi~lLleeL~~~~~eLa~Dq~GNhVIQkILe~~s~~~~~~~~Iie~L~~~lv 645 (808)
.+++.+|+.|+|||+|||++++...+.++ ..++.++.+++..++.|++|+||+|++++..++..... |++.+.+.+.
T Consensus 95 ~~~~~~L~~~~~gs~Vvq~l~~~~~~~~~-~~l~~el~~~~~~l~~d~~~~~v~~~~l~~~~~~~~~~--i~~~~~~~~~ 171 (339)
T d1m8za_ 95 RGHVLSLALQMYGCRVIQKALEFIPSDQQ-NEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQF--IIDAFKGQVF 171 (339)
T ss_dssp TTCHHHHHTSTTHHHHHHHHHHHSCHHHH-HHHHHTTTTCHHHHHHSTTHHHHHHHHHHHSCGGGGHH--HHHHTTTTHH
T ss_pred HhhHHHHhcccccchHHHhhhccCCHHHH-HHHHHHHhhhhHHHhcCCCcchHHHHHHHhcCHHHHHH--HHHHHHHHHH
Confidence 99999999999999999999999877654 45678999999999999999999999999998888888 9999999999
Q ss_pred HHhcCccchhhHHHHHhhcchhhHHHHHHHHHHhHHhhhcCCCchHHHHHHHhhcCchhHHHHHHHHHHhhhhcccCcch
Q 038006 646 DIATHQHGCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFKGHYVHLSTQKFS 725 (808)
Q Consensus 646 ~LS~~k~GS~VVQkcLe~as~e~r~~LIeeL~~~l~~La~DqyGNyVIQkLLe~~~~k~r~~Ii~~Lrg~lv~Ls~~KyG 725 (808)
+++++++||+|++++++.++++++..+++++.+++..|++|+|||||||++|+.++++.++.|++.|++++.+|+.+++|
T Consensus 172 ~l~~~~~g~~vlq~~l~~~~~~~~~~l~~~l~~~~~~L~~~~~G~~vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~k~g 251 (339)
T d1m8za_ 172 ALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFA 251 (339)
T ss_dssp HHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHHTHHHHTTSTTHHHHHHHHHHHSCHHHHHHHHHHHTTCHHHHHTSTTH
T ss_pred HHHhCcchhHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHcchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-hhhHHHHHHHHhC-----CchHHHHhcCCChhHHHHHHHhcCChhhHHHHHHHHhcc-cCccCCCCcc
Q 038006 726 SHVVEKCLKHF-GESRSQIVHELLS-----VPHFEQLLQDPFANYVIQCALSVTKGPLHASLIEAARRH-TNLRTSPYCK 798 (808)
Q Consensus 726 S~VLEKcL~~a-~k~Rk~II~eLl~-----~~~L~~La~DqyGNYVIQklL~~ad~~qre~Ll~eL~ph-~~Lr~sp~Gk 798 (808)
|+|+|+|+..+ ++.++.++.+++. .+.|..|+.|+|||||||++|+.+++.+++.|+++|+|+ +.|++++||+
T Consensus 252 S~vve~~l~~~~~~~~~~~~~~l~~~~~~~~~~l~~L~~d~~gn~Viq~~l~~~~~~~~~~i~~~l~~~~~~L~~~~~G~ 331 (339)
T d1m8za_ 252 SNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGK 331 (339)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHCEETTEEHHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHTTGGGHHHHTTSSTHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcccCchHHHHHHHcCCcccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCcHH
Confidence 99999999999 8889999998864 246999999999999999999999999999999999999 9999999999
Q ss_pred hhhhhh
Q 038006 799 RIFSRN 804 (808)
Q Consensus 799 rVls~~ 804 (808)
+|++++
T Consensus 332 ~v~~~l 337 (339)
T d1m8za_ 332 HILAKL 337 (339)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 2
>d1m8za_ a.118.1.8 (A:) Pumilio 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.1e-37 Score=333.00 Aligned_cols=305 Identities=18% Similarity=0.296 Sum_probs=277.3
Q ss_pred CccccCcccccCccccccCcccccccccccccccccCCCCcccccCCCccccCcchHHHHhhhHHHHhhcCCccHHHHhh
Q 038006 431 SLKGYKQNNLNEIVTRNQPVKICKHDGCAYDGVICDNGQSLMDIRCPLHLLSSSSSLADVRGYIYSMAKDQNGCRFLQRV 510 (808)
Q Consensus 431 ~~~~f~~dq~gs~f~qqk~~~~~~~e~~~~~~~ic~~~~~~~~~~~~~~l~qk~~iLeei~GkI~eLA~Dq~GSRVLQkl 510 (808)
....+++||.|||++|+.+..+++++++. +++++.|++.+||+|++|++++|++
T Consensus 25 ~~~~~~~~q~gSr~lQ~~l~~~~~~~~~~--------------------------I~~~l~~~~~~L~~~~~gn~vvqkl 78 (339)
T d1m8za_ 25 HIMEFSQDQHGSRFIQLKLERATPAERQL--------------------------VFNEILQAAYQLMVDVFGNYVIQKF 78 (339)
T ss_dssp CHHHHHTSHHHHHHHHHHHHHCCHHHHHH--------------------------HHHHHGGGHHHHHTSTTHHHHHHHH
T ss_pred HHHHHhcCchhhHHHHHHHhhCCHHHHHH--------------------------HHHHHHHHHHHHhhCcccchhHHHH
Confidence 44458899999999999887766665543 5567778999999999999999999
Q ss_pred hccCCHHHHHHHHHHHhcchhhhccccchhHHHHHHHhhCCHHHHHHHHHHHhhccchhhhhhcCcccchhHhHHHhhcC
Q 038006 511 FDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLLNVCTEEQMTRILLMVTEEPGQLVRVCLNTYGTRVVQKLIETLK 590 (808)
Q Consensus 511 LE~~t~Eq~~~I~~eL~~~~~~L~~DqfGNHVVQKLLe~~seeqr~~Ii~iL~~l~g~iveLa~hkyGcrVVQKLLE~ls 590 (808)
|++++++++..|+.++.+++..|+.|+||++|+|++++.++.+++..+ +.++.+++..++.|++|++|+|++++..+
T Consensus 79 l~~~~~~~~~~i~~~l~~~~~~L~~~~~gs~Vvq~l~~~~~~~~~~~l---~~el~~~~~~l~~d~~~~~v~~~~l~~~~ 155 (339)
T d1m8za_ 79 FEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEM---VRELDGHVLKCVKDQNGNHVVQKCIECVQ 155 (339)
T ss_dssp HHHSCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHH---HHTTTTCHHHHHHSTTHHHHHHHHHHHSC
T ss_pred HhhCCHHHHHHHHHHHHhhHHHHhcccccchHHHhhhccCCHHHHHHH---HHHHhhhhHHHhcCCCcchHHHHHHHhcC
Confidence 999999999999999999999999999999999999999998877766 67889999999999999999999999875
Q ss_pred cHHHHHHHHHHhccCccccccccCCchHHHHHHhhccccchhHHHHHHHHHHHHHHHhcCccchhhHHHHHhhcchhhHH
Q 038006 591 TRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEVYLFFDAAAKFCVDIATHQHGCCVLQRCIAHSIGRHRD 670 (808)
Q Consensus 591 ~~qqi~lLleeL~~~~~eLa~Dq~GNhVIQkILe~~s~~~~~~~~Iie~L~~~lv~LS~~k~GS~VVQkcLe~as~e~r~ 670 (808)
. +....+++.+.+.+..++++++|+.|+|++++.+.++.+.. +++.+.+++..++.+++|++|+|.+|++++++.+.
T Consensus 156 ~-~~~~~i~~~~~~~~~~l~~~~~g~~vlq~~l~~~~~~~~~~--l~~~l~~~~~~L~~~~~G~~vvq~~l~~~~~~~~~ 232 (339)
T d1m8za_ 156 P-QSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLP--ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKS 232 (339)
T ss_dssp G-GGGHHHHHHTTTTHHHHHTSTTHHHHHHHHHHHSCHHHHHH--HHHHHHHTHHHHTTSTTHHHHHHHHHHHSCHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHHhCcchhHHHHHHHhcCCHHHHHH--HHHHHHHHHHHHHhCccHHHHHHHHHHcCCHHHHH
Confidence 4 34566789999999999999999999999999988877777 99999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHhhhcCCCchHHHHHHHhhcCchhHHHHHHHHH-------HhhhhcccCcchHHHHHHHHhhh-hhhHHH
Q 038006 671 KLITEISKNGRHLAQDPFGNYVVQYIIELKIPSVSANLLSQFK-------GHYVHLSTQKFSSHVVEKCLKHF-GESRSQ 742 (808)
Q Consensus 671 ~LIeeL~~~l~~La~DqyGNyVIQkLLe~~~~k~r~~Ii~~Lr-------g~lv~Ls~~KyGS~VLEKcL~~a-~k~Rk~ 742 (808)
.|++.+..++..|+.|+||++||++++..++++.+..+++.+. +.+..|++++||++||+++|+.+ ++.++.
T Consensus 233 ~i~~~l~~~~~~l~~~k~gS~vve~~l~~~~~~~~~~~~~~l~~~~~~~~~~l~~L~~d~~gn~Viq~~l~~~~~~~~~~ 312 (339)
T d1m8za_ 233 KIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKI 312 (339)
T ss_dssp HHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHHCEETTEEHHHHHHTSTTHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHhhHHHHHcchhHHHHHHHHHHhCCHHHHHHHHHHHHhcccCchHHHHHHHcCCcccHHHHHHHHhCCHHHHHH
Confidence 9999999999999999999999999999999999998888774 34788999999999999999999 888999
Q ss_pred HHHHHhCCchHHHHhcCCChhHHHHHH
Q 038006 743 IVHELLSVPHFEQLLQDPFANYVIQCA 769 (808)
Q Consensus 743 II~eLl~~~~L~~La~DqyGNYVIQkl 769 (808)
|+.+|.. ++..|..++||..|++++
T Consensus 313 i~~~l~~--~~~~L~~~~~G~~v~~~l 337 (339)
T d1m8za_ 313 VMHKIRP--HIATLRKYTYGKHILAKL 337 (339)
T ss_dssp HHHTTGG--GHHHHTTSSTHHHHHHHH
T ss_pred HHHHHHH--HHHHHhcCCcHHHHHHHH
Confidence 9888864 899999999999999986
No 3
>d1wvka_ g.82.1.1 (A:) Expressed protein At2g23090/F21P24.15 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=11.19 E-value=37 Score=27.79 Aligned_cols=8 Identities=63% Similarity=1.203 Sum_probs=5.7
Q ss_pred ccccCCCC
Q 038006 69 HHNLVGGS 76 (808)
Q Consensus 69 ~~~~~~~~ 76 (808)
||+|.||.
T Consensus 5 ~~~~~gGG 12 (86)
T d1wvka_ 5 HHHLEGGG 12 (86)
T ss_dssp SCSCCSCC
T ss_pred cccccCCc
Confidence 67788874
No 4
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.03 E-value=7.7e+02 Score=23.92 Aligned_cols=12 Identities=33% Similarity=0.493 Sum_probs=7.6
Q ss_pred hHHHHhcCCChh
Q 038006 752 HFEQLLQDPFAN 763 (808)
Q Consensus 752 ~L~~La~DqyGN 763 (808)
.+.+++.|+..|
T Consensus 523 ~ll~~~~D~v~n 534 (588)
T d1b3ua_ 523 TVLRMAGDPVAN 534 (588)
T ss_dssp HHHHGGGCSCHH
T ss_pred HHHHHcCCCCHH
Confidence 556677776653
No 5
>d1j2jb_ a.7.8.1 (B:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.13 E-value=1.9e+02 Score=20.18 Aligned_cols=19 Identities=21% Similarity=0.338 Sum_probs=13.9
Q ss_pred ccHHHHhhhccCCHHHHHH
Q 038006 503 GCRFLQRVFDEGTFLDLQI 521 (808)
Q Consensus 503 GSRVLQklLE~~t~Eq~~~ 521 (808)
-|..|+++|....|++.+.
T Consensus 7 ksklL~~LLkS~~PeDLqa 25 (41)
T d1j2jb_ 7 KSKMLARLLKSSHPEDLRA 25 (41)
T ss_dssp HHHHHHHHHTCSCHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHH
Confidence 3567788888888887765
No 6
>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.36 E-value=2.3e+02 Score=21.29 Aligned_cols=47 Identities=17% Similarity=0.177 Sum_probs=29.5
Q ss_pred HHhhhccCCHHHHHHHHHHHhcchh----h---hccccchhHHHHHHHhhCCHH
Q 038006 507 LQRVFDEGTFLDLQIIFDEVIDHIV----E---LMMEQFGNYLVQKLLNVCTEE 553 (808)
Q Consensus 507 LQklLE~~t~Eq~~~I~~eL~~~~~----~---L~~DqfGNHVVQKLLe~~see 553 (808)
++++++..+.+++...++.+...+. . -..+.|+-.+++-+....+++
T Consensus 14 ve~l~~n~t~~~I~~~l~~~C~~lp~~~~~~C~~lv~~Y~~~ii~~l~~~~~P~ 67 (74)
T d1l9la_ 14 LKKMVDKPTQRSVSNAATRVCRTGRSRWRDVCRNFMRRYQSRVIQGLVAGETAQ 67 (74)
T ss_dssp HHHHCSSCCHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHhCCCCHHHHHHHHHhHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Confidence 4667776677777777777765443 1 234566666666666666554
No 7
>d1sska_ b.148.1.1 (A:) Nucleocapsid protein {SARS coronavirus, (SARS-CoV) [TaxId: 227859]}
Probab=6.27 E-value=1.3e+02 Score=26.92 Aligned_cols=27 Identities=22% Similarity=0.293 Sum_probs=14.1
Q ss_pred ccccCCCCCccceecccCCCCCCCCCCcccCC
Q 038006 69 HHNLVGGSPFSRVSLQSTTEHSSPSSSCFSNT 100 (808)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (808)
|||..|.-|-.+ +.+. .+...|+|.+-
T Consensus 8 ~~~~~~~~Pr~~----~~~~-p~~~~SwF~~L 34 (158)
T d1sska_ 8 HHHSSGLVPRGS----AMGL-PNNTASWFTAL 34 (158)
T ss_dssp SCCSSCCSCCCC----CCCS-CSSCSCSSCEE
T ss_pred cccccCcccCCC----CCCC-CCCCcchhhhh
Confidence 566677766544 1222 11235788765
No 8
>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]}
Probab=5.83 E-value=2.3e+02 Score=21.22 Aligned_cols=48 Identities=6% Similarity=0.041 Sum_probs=30.0
Q ss_pred HHhhhccCCHHHHHHHHHHHhcchh----h---hccccchhHHHHHHHhhCCHHH
Q 038006 507 LQRVFDEGTFLDLQIIFDEVIDHIV----E---LMMEQFGNYLVQKLLNVCTEEQ 554 (808)
Q Consensus 507 LQklLE~~t~Eq~~~I~~eL~~~~~----~---L~~DqfGNHVVQKLLe~~seeq 554 (808)
++++++..+.+++...+.++...+. . -+.++||..+++.+....+++.
T Consensus 15 ~~~l~~~~t~~~I~~~l~~~C~~lp~~~~~~C~~~v~~y~~~ii~~l~~~~~p~~ 69 (77)
T d1of9a_ 15 LENLLTTKGADKVKDYISSLCNKASGFIATLCTKVLDFGIDKLIQLIEDKVDANA 69 (77)
T ss_dssp HHHHCSSSCSHHHHHHHHHHHTTCSSTTHHHHHHHHHHCHHHHHHHHHHTCCHHH
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHCChHHHHHhHHHHHHHHHHHHHHHHHcCCHHH
Confidence 4566655566666666666664442 2 2356778787777777666654
No 9
>d2clyb1 f.53.1.1 (B:4-123) ATP synthase subunit d, mitochondrial {Cow (Bos taurus) [TaxId: 9913]}
Probab=5.43 E-value=3.4e+02 Score=22.80 Aligned_cols=43 Identities=28% Similarity=0.278 Sum_probs=22.3
Q ss_pred cccceecccchhhHHHHHHHHH---HHHHHHHHHHhhhhHHHHHHH
Q 038006 2 LKIPISIGAGQKYQEKIEQRAE---KEEKRVIKERMRREEDELGRM 44 (808)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 44 (808)
||||+..-..-+--+.-++.+. ++-+..+..|+.+.+.||+.|
T Consensus 73 lkvp~p~d~~t~~ida~e~e~~~~~~~~~~~s~~rI~~lekeLe~i 118 (120)
T d2clyb1 73 LKVPIPEDKYTAQVDAEEKEDVKSCAEFLTQSKTRIQEYEKELEKM 118 (120)
T ss_dssp CCCCCCCCCCTTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCChhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677655433222222222222 222334677777778888776
No 10
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.81 E-value=1.2e+03 Score=22.23 Aligned_cols=278 Identities=8% Similarity=-0.016 Sum_probs=0.0
Q ss_pred HHHhhhccCCHHHHHHHHHHHhcchhhhccccchhHHHHHHH-------hhCCHHHHHHHHHHHhhccchhhhhhcCccc
Q 038006 506 FLQRVFDEGTFLDLQIIFDEVIDHIVELMMEQFGNYLVQKLL-------NVCTEEQMTRILLMVTEEPGQLVRVCLNTYG 578 (808)
Q Consensus 506 VLQklLE~~t~Eq~~~I~~eL~~~~~~L~~DqfGNHVVQKLL-------e~~seeqr~~Ii~iL~~l~g~iveLa~hkyG 578 (808)
++..++...+++.+...+..+..-+..+..+..-+..+++++ .......|..+ ...+..-...+....+-
T Consensus 285 ~l~~ll~d~~~~vr~~a~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~vr~~~---~~~l~~~~~~~~~~~~~ 361 (588)
T d1b3ua_ 285 AFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSAL---ASVIMGLSPILGKDNTI 361 (588)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHTCSCHHHHHHH---HTTGGGGHHHHCHHHHH
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHhhcCCChHHHHHH---HHHHhhhhhccchhHHH
Q ss_pred chhHhHHHhhcC--cHHHHHHHHHHhccCccccccccCCchHHHHHHhhccccchhHHH----HHHHHHHHHHHHhcCcc
Q 038006 579 TRVVQKLIETLK--TRQQVSLVKAALKPGFLDLIKDLNGNHVLQRCLQCLSNEDNEVYL----FFDAAAKFCVDIATHQH 652 (808)
Q Consensus 579 crVVQKLLE~ls--~~qqi~lLleeL~~~~~eLa~Dq~GNhVIQkILe~~s~~~~~~~~----Iie~L~~~lv~LS~~k~ 652 (808)
..++..++..+. .++....+...+..-...+..+.....++..+.+........... .+..+...+..-..+..
T Consensus 362 ~~l~p~l~~~l~d~~~~v~~~~~~~l~~~~~~~~~~~~~~~ll~~l~~~~~d~~~~~r~~~~~~l~~l~~~~~~~~~~~~ 441 (588)
T d1b3ua_ 362 EHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEK 441 (588)
T ss_dssp HHTHHHHHHHHTCSCHHHHHHHHTTCHHHHHHSCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCGGGCCHH
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhcchhhhhhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcChHhHHHH
Q ss_pred chhhHHHHHhhcchhhHHHHHHHHHHhHHhhhcCCCchHHHHHHHhh---cCchhHHHHHHHHHHhhhhcccCcchHHHH
Q 038006 653 GCCVLQRCIAHSIGRHRDKLITEISKNGRHLAQDPFGNYVVQYIIEL---KIPSVSANLLSQFKGHYVHLSTQKFSSHVV 729 (808)
Q Consensus 653 GS~VVQkcLe~as~e~r~~LIeeL~~~l~~La~DqyGNyVIQkLLe~---~~~k~r~~Ii~~Lrg~lv~Ls~~KyGS~VL 729 (808)
-...+..++.......|...+..+..-+..+..+..-..++..+++. .+...|...+..+..-...+..+.+-.+++
T Consensus 442 l~~~l~~~l~D~~~~VR~~A~~~L~~l~~~~~~~~~~~~i~~~l~~~~~~~~~~~R~~~~~~l~~l~~~~~~~~~~~~il 521 (588)
T d1b3ua_ 442 LNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHML 521 (588)
T ss_dssp HHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHHHHHHHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHhhccCCchhHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcChHHHHHHHH
Q ss_pred HHHHhhh----hhhHHHHHHHHhC-CchHHHHhcCCChhHHHHHHHhcCChhhHHHHHHHHh
Q 038006 730 EKCLKHF----GESRSQIVHELLS-VPHFEQLLQDPFANYVIQCALSVTKGPLHASLIEAAR 786 (808)
Q Consensus 730 EKcL~~a----~k~Rk~II~eLl~-~~~L~~La~DqyGNYVIQklL~~ad~~qre~Ll~eL~ 786 (808)
..++... +..|...++.|.. ...+..=...+.=..+++++++-.+.+.|....+++.
T Consensus 522 p~ll~~~~D~v~nVR~~a~~~l~~i~~~~~~~~~~~~i~~~l~~L~~D~d~dVr~~A~~al~ 583 (588)
T d1b3ua_ 522 PTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEALT 583 (588)
T ss_dssp HHHHHGGGCSCHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Done!