Query 038019
Match_columns 866
No_of_seqs 817 out of 5742
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 11:06:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038019.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038019hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ogq_A PGIP-2, polygalacturona 100.0 3.4E-39 1.1E-43 350.6 16.5 294 3-316 4-302 (313)
2 4eco_A Uncharacterized protein 100.0 1.4E-38 4.7E-43 379.4 21.7 333 4-362 29-502 (636)
3 4ecn_A Leucine-rich repeat pro 100.0 9.8E-38 3.4E-42 378.4 23.8 353 4-376 268-758 (876)
4 3rgz_A Protein brassinosteroid 100.0 1.6E-37 5.5E-42 378.6 25.0 333 3-363 10-383 (768)
5 3rgz_A Protein brassinosteroid 100.0 2.5E-36 8.5E-41 368.1 22.4 303 66-368 319-724 (768)
6 3v47_A TOLL-like receptor 5B a 100.0 3.3E-34 1.1E-38 328.5 20.2 299 65-363 30-410 (455)
7 2id5_A Lingo-1, leucine rich r 100.0 2.5E-33 8.5E-38 323.2 24.5 315 51-365 14-337 (477)
8 4eco_A Uncharacterized protein 100.0 5.4E-33 1.9E-37 331.1 13.6 293 76-375 194-540 (636)
9 3v47_A TOLL-like receptor 5B a 100.0 4.3E-32 1.5E-36 310.9 18.9 282 64-345 53-413 (455)
10 3t6q_A CD180 antigen; protein- 100.0 5.4E-31 1.9E-35 313.1 25.1 298 66-365 255-564 (606)
11 3vq2_A TLR4, TOLL-like recepto 100.0 5.5E-31 1.9E-35 313.1 24.3 298 65-363 32-512 (606)
12 2z7x_B TOLL-like receptor 1, v 100.0 4.3E-31 1.5E-35 308.0 22.9 304 65-375 21-448 (520)
13 2id5_A Lingo-1, leucine rich r 100.0 7.2E-31 2.5E-35 302.6 24.1 281 64-344 55-337 (477)
14 1ogq_A PGIP-2, polygalacturona 100.0 2.7E-32 9.2E-37 296.2 10.8 248 89-338 50-302 (313)
15 3oja_B Anopheles plasmodium-re 100.0 8.8E-31 3E-35 310.1 24.7 283 65-361 51-337 (597)
16 2z81_A CD282 antigen, TOLL-lik 100.0 5.7E-31 1.9E-35 309.1 22.4 297 65-363 26-446 (549)
17 4ecn_A Leucine-rich repeat pro 100.0 5.5E-31 1.9E-35 319.3 21.0 289 64-360 490-818 (876)
18 3t6q_A CD180 antigen; protein- 100.0 1.1E-30 3.7E-35 310.6 23.1 297 64-362 32-390 (606)
19 3o6n_A APL1; leucine-rich repe 100.0 1.7E-30 5.9E-35 291.3 23.4 289 64-362 44-353 (390)
20 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.7E-30 5.9E-35 305.7 24.5 290 65-362 52-464 (562)
21 3vq2_A TLR4, TOLL-like recepto 100.0 2.6E-30 8.8E-35 307.3 24.7 307 64-371 55-544 (606)
22 2z7x_B TOLL-like receptor 1, v 100.0 3.4E-30 1.2E-34 300.3 22.5 287 68-363 3-414 (520)
23 3j0a_A TOLL-like receptor 5; m 100.0 7.2E-30 2.5E-34 314.3 25.7 299 64-362 23-376 (844)
24 4g8a_A TOLL-like receptor 4; l 100.0 1.3E-29 4.4E-34 302.6 26.3 140 64-203 51-191 (635)
25 4fcg_A Uncharacterized protein 100.0 1.7E-30 5.9E-35 283.7 16.7 270 4-318 26-314 (328)
26 1xku_A Decorin; proteoglycan, 100.0 5.8E-29 2E-33 272.2 27.9 268 64-341 30-307 (330)
27 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.6E-29 5.5E-34 297.5 25.1 287 68-363 34-443 (562)
28 2ft3_A Biglycan; proteoglycan, 100.0 2.1E-29 7.1E-34 276.0 24.2 273 64-347 32-316 (332)
29 2z81_A CD282 antigen, TOLL-lik 100.0 1.2E-29 4E-34 297.9 22.9 304 64-374 49-500 (549)
30 2z63_A TOLL-like receptor 4, v 100.0 1.7E-29 5.7E-34 297.9 24.2 155 209-364 347-510 (570)
31 3j0a_A TOLL-like receptor 5; m 100.0 4.6E-29 1.6E-33 307.1 26.9 296 64-361 47-394 (844)
32 1ziw_A TOLL-like receptor 3; i 100.0 4.6E-29 1.6E-33 300.7 25.8 297 65-361 25-366 (680)
33 1ziw_A TOLL-like receptor 3; i 100.0 6.9E-29 2.4E-33 299.1 25.7 297 66-363 249-599 (680)
34 1xku_A Decorin; proteoglycan, 100.0 2.2E-28 7.4E-33 267.7 27.2 267 65-338 52-330 (330)
35 2ft3_A Biglycan; proteoglycan, 100.0 3E-28 1E-32 266.8 22.8 267 64-338 53-331 (332)
36 3o6n_A APL1; leucine-rich repe 100.0 3.6E-28 1.2E-32 272.4 22.3 268 65-343 69-355 (390)
37 1o6v_A Internalin A; bacterial 100.0 1.3E-27 4.6E-32 274.3 26.3 289 65-375 68-357 (466)
38 4fmz_A Internalin; leucine ric 100.0 1.5E-27 5.3E-32 262.8 25.8 291 65-375 44-337 (347)
39 3oja_B Anopheles plasmodium-re 100.0 3.5E-28 1.2E-32 287.8 22.1 284 65-363 75-360 (597)
40 4fmz_A Internalin; leucine ric 100.0 2.2E-27 7.5E-32 261.5 26.8 279 64-361 65-346 (347)
41 2z63_A TOLL-like receptor 4, v 100.0 5.7E-28 2E-32 284.8 23.3 302 65-367 52-537 (570)
42 1o6v_A Internalin A; bacterial 100.0 2.6E-27 8.9E-32 271.9 27.3 290 65-376 46-336 (466)
43 2z80_A TOLL-like receptor 2, v 100.0 9.1E-29 3.1E-33 273.4 13.1 267 74-344 40-318 (353)
44 2z66_A Variable lymphocyte rec 100.0 1.1E-28 3.8E-33 267.0 13.0 247 69-319 11-262 (306)
45 3bz5_A Internalin-J, INLJ; leu 100.0 3.1E-27 1.1E-31 269.5 23.3 273 65-362 42-332 (457)
46 4fcg_A Uncharacterized protein 100.0 1.5E-27 5.1E-32 260.4 19.8 225 87-340 79-314 (328)
47 2z80_A TOLL-like receptor 2, v 100.0 4.7E-28 1.6E-32 267.6 16.0 258 64-322 51-318 (353)
48 1ozn_A Reticulon 4 receptor; N 99.9 2.2E-27 7.7E-32 253.9 18.1 254 68-348 14-269 (285)
49 3zyi_A Leucine-rich repeat-con 99.9 5.9E-27 2E-31 267.8 22.1 244 69-317 58-302 (452)
50 3bz5_A Internalin-J, INLJ; leu 99.9 2E-26 6.8E-31 262.8 25.3 273 64-362 63-353 (457)
51 3zyj_A Leucine-rich repeat-con 99.9 9.2E-27 3.1E-31 265.3 22.2 244 69-341 47-293 (440)
52 1wwl_A Monocyte differentiatio 99.9 1.5E-28 5.2E-33 266.6 4.9 248 86-341 40-310 (312)
53 2z66_A Variable lymphocyte rec 99.9 1E-26 3.6E-31 251.4 18.4 248 92-343 10-264 (306)
54 4g8a_A TOLL-like receptor 4; l 99.9 4E-26 1.4E-30 272.3 24.1 302 64-365 75-584 (635)
55 1ozn_A Reticulon 4 receptor; N 99.9 3.8E-27 1.3E-31 252.2 13.5 238 64-302 31-269 (285)
56 3zyi_A Leucine-rich repeat-con 99.9 4.6E-26 1.6E-30 260.5 22.7 249 90-343 55-306 (452)
57 1wwl_A Monocyte differentiatio 99.9 4.5E-28 1.6E-32 262.8 5.6 245 65-319 43-310 (312)
58 3zyj_A Leucine-rich repeat-con 99.9 6.7E-26 2.3E-30 258.1 23.3 246 91-365 45-296 (440)
59 1jl5_A Outer protein YOPM; leu 99.9 5.7E-26 2E-30 258.8 17.6 269 64-362 10-291 (454)
60 1jl5_A Outer protein YOPM; leu 99.9 8.4E-25 2.9E-29 249.2 25.8 262 66-362 92-371 (454)
61 3o53_A Protein LRIM1, AGAP0063 99.9 3.3E-27 1.1E-31 256.7 -0.2 245 66-348 11-259 (317)
62 2o6q_A Variable lymphocyte rec 99.9 4.2E-24 1.4E-28 226.5 21.2 212 51-295 8-219 (270)
63 3o53_A Protein LRIM1, AGAP0063 99.9 6.8E-26 2.3E-30 246.3 3.5 242 65-344 34-280 (317)
64 3oja_A Leucine-rich immune mol 99.9 2.2E-25 7.4E-30 256.6 7.7 232 90-335 35-270 (487)
65 3oja_A Leucine-rich immune mol 99.9 5.5E-25 1.9E-29 253.2 10.6 224 111-348 32-259 (487)
66 2z62_A TOLL-like receptor 4, v 99.9 1E-23 3.5E-28 224.3 19.6 225 71-320 13-239 (276)
67 3g06_A SSPH2 (leucine-rich rep 99.9 9.4E-24 3.2E-28 248.0 21.2 256 66-363 41-299 (622)
68 2z62_A TOLL-like receptor 4, v 99.9 6.1E-24 2.1E-28 226.0 17.5 208 64-296 27-239 (276)
69 2o6q_A Variable lymphocyte rec 99.9 2.1E-22 7E-27 213.5 23.7 205 90-321 17-221 (270)
70 1z7x_W Ribonuclease inhibitor; 99.9 3.8E-26 1.3E-30 261.8 -6.7 299 65-363 56-413 (461)
71 3rfs_A Internalin B, repeat mo 99.9 8.5E-23 2.9E-27 216.7 18.4 209 86-305 38-246 (272)
72 3rfs_A Internalin B, repeat mo 99.9 4.2E-23 1.5E-27 219.0 16.0 221 91-324 21-241 (272)
73 1z7x_W Ribonuclease inhibitor; 99.9 5.1E-26 1.7E-30 260.8 -8.7 277 66-342 4-328 (461)
74 3g06_A SSPH2 (leucine-rich rep 99.9 8.2E-22 2.8E-26 231.5 25.3 243 65-348 61-305 (622)
75 1p9a_G Platelet glycoprotein I 99.9 3.4E-22 1.2E-26 213.9 19.4 204 85-319 6-209 (290)
76 1p9a_G Platelet glycoprotein I 99.9 4.9E-22 1.7E-26 212.6 19.5 204 108-342 5-210 (290)
77 3goz_A Leucine-rich repeat-con 99.9 1.1E-23 3.9E-28 233.2 5.6 249 70-318 3-297 (362)
78 2ast_B S-phase kinase-associat 99.9 8E-24 2.7E-28 231.9 4.0 253 67-348 49-314 (336)
79 2ca6_A RAN GTPase-activating p 99.9 9E-24 3.1E-28 236.2 0.5 244 81-344 24-320 (386)
80 2ca6_A RAN GTPase-activating p 99.9 9E-24 3.1E-28 236.2 -1.1 240 104-363 23-318 (386)
81 4glp_A Monocyte differentiatio 99.9 3.6E-22 1.2E-26 216.1 11.3 228 90-341 65-308 (310)
82 2ast_B S-phase kinase-associat 99.9 1.7E-23 5.8E-28 229.3 0.9 233 65-302 70-314 (336)
83 2xwt_C Thyrotropin receptor; s 99.9 8.8E-22 3E-26 204.6 13.5 203 80-315 25-236 (239)
84 2xwt_C Thyrotropin receptor; s 99.9 9.1E-22 3.1E-26 204.5 13.0 204 104-338 25-237 (239)
85 4glp_A Monocyte differentiatio 99.9 5.7E-22 1.9E-26 214.6 11.7 227 66-319 65-308 (310)
86 3m19_A Variable lymphocyte rec 99.9 8E-21 2.7E-25 198.9 19.5 177 67-246 16-192 (251)
87 3goz_A Leucine-rich repeat-con 99.9 6.7E-23 2.3E-27 227.0 3.2 254 93-346 2-303 (362)
88 1h6u_A Internalin H; cell adhe 99.9 6.2E-21 2.1E-25 206.1 17.2 195 85-319 37-231 (308)
89 3m19_A Variable lymphocyte rec 99.9 1.7E-20 5.8E-25 196.4 19.6 180 90-296 15-194 (251)
90 1h6u_A Internalin H; cell adhe 99.8 7.4E-21 2.5E-25 205.4 16.6 208 94-341 24-231 (308)
91 3omv_A RAF proto-oncogene seri 99.8 1.5E-21 5.2E-26 208.5 6.4 142 635-786 153-297 (307)
92 2o6s_A Variable lymphocyte rec 99.8 8.9E-20 3E-24 185.1 17.4 181 68-282 10-190 (208)
93 4ay9_X Follicle-stimulating ho 99.8 5.1E-20 1.8E-24 202.7 16.2 198 69-270 13-215 (350)
94 4gt4_A Tyrosine-protein kinase 99.8 1.5E-21 5.3E-26 209.3 3.0 138 635-787 166-304 (308)
95 4aoj_A High affinity nerve gro 99.8 3E-21 1E-25 209.1 3.5 141 635-790 179-320 (329)
96 4ay9_X Follicle-stimulating ho 99.8 9.8E-20 3.4E-24 200.5 13.0 238 92-336 12-255 (350)
97 3cvr_A Invasion plasmid antige 99.8 8.7E-20 3E-24 211.7 13.0 203 51-305 51-254 (571)
98 2o6s_A Variable lymphocyte rec 99.8 1.9E-19 6.5E-24 182.6 13.6 177 51-234 10-190 (208)
99 4asz_A BDNF/NT-3 growth factor 99.8 3.2E-21 1.1E-25 206.0 0.1 140 635-789 149-289 (299)
100 3cvr_A Invasion plasmid antige 99.8 7.4E-19 2.5E-23 203.9 16.9 185 90-324 60-249 (571)
101 4ase_A Vascular endothelial gr 99.8 3.2E-20 1.1E-24 202.7 3.5 140 635-788 206-346 (353)
102 3ogk_B Coronatine-insensitive 99.8 9.3E-21 3.2E-25 224.2 -1.7 212 152-363 284-528 (592)
103 2v70_A SLIT-2, SLIT homolog 2 99.8 1.3E-18 4.5E-23 178.0 14.5 154 68-224 14-168 (220)
104 2v9t_B SLIT homolog 2 protein 99.8 2.2E-18 7.4E-23 176.4 15.3 153 68-223 14-166 (220)
105 1h6t_A Internalin B; cell adhe 99.8 1.8E-18 6.1E-23 185.1 13.9 173 85-295 42-214 (291)
106 3hmm_A TGF-beta receptor type- 99.8 4.7E-20 1.6E-24 198.1 1.4 150 634-787 128-295 (303)
107 1m9s_A Internalin B; cell inva 99.8 2.6E-18 8.9E-23 201.5 16.2 190 67-272 23-212 (605)
108 2xot_A Amphoterin-induced prot 99.8 1.3E-18 4.4E-23 192.3 12.8 174 68-244 21-200 (361)
109 3e6j_A Variable lymphocyte rec 99.8 7.5E-18 2.6E-22 173.5 17.6 143 80-225 33-175 (229)
110 1h6t_A Internalin B; cell adhe 99.8 5.1E-18 1.8E-22 181.5 15.6 168 64-245 45-212 (291)
111 1m9s_A Internalin B; cell inva 99.8 2.4E-18 8.1E-23 201.9 13.3 191 89-295 21-211 (605)
112 2v9t_B SLIT homolog 2 protein 99.8 8E-18 2.8E-22 172.1 15.5 151 92-245 14-164 (220)
113 3ogk_B Coronatine-insensitive 99.8 1.6E-20 5.4E-25 222.2 -5.5 294 66-362 113-477 (592)
114 2xot_A Amphoterin-induced prot 99.7 5.5E-18 1.9E-22 187.3 15.0 176 92-270 21-202 (361)
115 2v70_A SLIT-2, SLIT homolog 2 99.7 9.8E-18 3.4E-22 171.5 15.5 152 92-246 14-166 (220)
116 3e6j_A Variable lymphocyte rec 99.7 4E-17 1.4E-21 168.1 17.4 151 92-246 22-172 (229)
117 4b8c_D Glucose-repressible alc 99.7 7.2E-19 2.5E-23 211.5 4.7 192 65-291 173-369 (727)
118 4ezg_A Putative uncharacterize 99.7 2.3E-17 7.9E-22 165.7 12.5 153 86-246 41-194 (197)
119 4ezg_A Putative uncharacterize 99.7 2.5E-17 8.5E-22 165.4 11.6 150 66-222 45-194 (197)
120 4g3f_A NF-kappa-beta-inducing 99.7 2E-18 6.7E-23 186.3 2.7 142 635-789 171-316 (336)
121 1dce_A Protein (RAB geranylger 99.7 5.7E-20 1.9E-24 214.4 -12.7 118 187-333 443-566 (567)
122 2qkw_B Protein kinase; three-h 99.7 1.5E-17 5E-22 180.8 6.6 154 637-790 162-316 (321)
123 2p1m_B Transport inhibitor res 99.7 9.7E-19 3.3E-23 206.9 -3.9 248 65-313 105-405 (594)
124 1xeu_A Internalin C; cellular 99.7 9.2E-17 3.1E-21 169.0 10.2 168 66-272 20-187 (263)
125 1dce_A Protein (RAB geranylger 99.7 1.7E-19 5.9E-24 210.2 -12.1 202 110-345 346-551 (567)
126 1xeu_A Internalin C; cellular 99.7 9.9E-17 3.4E-21 168.8 10.0 149 133-294 37-185 (263)
127 1w8a_A SLIT protein; signaling 99.7 3.1E-16 1.1E-20 156.7 12.0 132 66-200 9-141 (192)
128 4b8c_D Glucose-repressible alc 99.7 2.6E-17 9E-22 197.8 4.7 160 66-229 192-361 (727)
129 3fpq_A Serine/threonine-protei 99.7 8.9E-17 3.1E-21 170.3 8.1 130 635-782 152-282 (290)
130 2p1m_B Transport inhibitor res 99.7 9.4E-18 3.2E-22 198.4 0.5 295 65-361 130-519 (594)
131 4fih_A Serine/threonine-protei 99.6 5.3E-17 1.8E-21 175.6 5.2 131 635-782 191-323 (346)
132 1w8a_A SLIT protein; signaling 99.6 5.8E-16 2E-20 154.7 12.2 132 92-226 11-143 (192)
133 2ell_A Acidic leucine-rich nuc 99.6 6.5E-16 2.2E-20 150.7 11.3 132 89-222 24-160 (168)
134 4b9d_A Serine/threonine-protei 99.6 8.7E-18 3E-22 182.1 -2.4 131 635-782 146-276 (350)
135 3uim_A Brassinosteroid insensi 99.6 9.9E-17 3.4E-21 174.5 5.5 147 640-787 160-309 (326)
136 2je0_A Acidic leucine-rich nuc 99.6 6.2E-16 2.1E-20 147.6 8.6 125 115-241 19-148 (149)
137 2ell_A Acidic leucine-rich nuc 99.6 2.5E-15 8.5E-20 146.5 13.0 134 111-246 22-160 (168)
138 4fie_A Serine/threonine-protei 99.6 1.9E-16 6.5E-21 175.6 5.6 131 635-782 268-400 (423)
139 2je0_A Acidic leucine-rich nuc 99.6 1.5E-15 5.1E-20 144.9 10.6 129 88-218 16-149 (149)
140 2wfh_A SLIT homolog 2 protein 99.6 3.6E-15 1.2E-19 149.0 13.4 127 68-198 13-139 (193)
141 4aw0_A HPDK1, 3-phosphoinositi 99.6 1.2E-16 4E-21 170.2 2.6 130 636-781 154-283 (311)
142 3hyh_A Carbon catabolite-derep 99.6 4.3E-16 1.5E-20 163.6 6.0 129 635-782 133-262 (275)
143 2o6r_A Variable lymphocyte rec 99.6 8.5E-15 2.9E-19 144.1 14.0 132 67-201 9-140 (177)
144 2wfh_A SLIT homolog 2 protein 99.6 8.4E-15 2.9E-19 146.3 13.8 128 92-223 13-140 (193)
145 3ubd_A Ribosomal protein S6 ki 99.6 3.5E-16 1.2E-20 166.5 3.2 124 636-777 148-271 (304)
146 2o6r_A Variable lymphocyte rec 99.6 1.5E-14 5.2E-19 142.3 14.5 133 91-226 9-141 (177)
147 3sb4_A Hypothetical leucine ri 99.6 4E-15 1.4E-19 162.1 9.1 120 65-192 25-155 (329)
148 3lb7_A RAF proto-oncogene seri 99.5 4.3E-15 1.5E-19 160.1 6.9 143 637-789 155-300 (307)
149 4g31_A Eukaryotic translation 99.5 1.1E-15 3.9E-20 163.2 1.7 131 635-782 139-279 (299)
150 3poz_A Epidermal growth factor 99.5 2.2E-15 7.4E-20 164.1 3.5 138 637-789 140-278 (327)
151 3soc_A Activin receptor type-2 99.5 1.5E-15 5.3E-20 164.8 1.3 146 637-787 154-316 (322)
152 2nru_A Interleukin-1 receptor- 99.5 1.1E-14 3.8E-19 156.7 7.2 143 642-787 161-304 (307)
153 3sv0_A Casein kinase I-like; t 99.5 3.7E-15 1.3E-19 170.3 3.0 137 643-787 132-276 (483)
154 3sb4_A Hypothetical leucine ri 99.5 3.6E-14 1.2E-18 154.5 10.2 239 65-312 49-328 (329)
155 3og7_A AKAP9-BRAF fusion prote 99.5 1.2E-14 4.2E-19 155.1 6.2 137 642-788 148-287 (289)
156 1a9n_A U2A', U2A'; complex (nu 99.5 3.1E-14 1.1E-18 139.9 8.4 133 84-222 14-153 (176)
157 1ds9_A Outer arm dynein; leuci 99.5 2.1E-16 7.2E-21 158.8 -7.5 150 85-239 14-180 (198)
158 3p86_A Serine/threonine-protei 99.5 1.3E-14 4.5E-19 156.5 5.8 135 640-790 165-299 (309)
159 3kex_A Receptor tyrosine-prote 99.5 7.6E-15 2.6E-19 159.6 3.8 139 637-790 138-277 (325)
160 4fdw_A Leucine rich hypothetic 99.5 7.9E-13 2.7E-17 147.3 20.2 223 84-318 131-358 (401)
161 1fmk_A C-SRC, P60-SRC, tyrosin 99.5 1.5E-14 5.1E-19 164.7 6.1 138 637-790 303-441 (452)
162 3op5_A Serine/threonine-protei 99.5 5.9E-15 2E-19 163.2 2.5 141 643-789 181-329 (364)
163 1csn_A Casein kinase-1; phosph 99.5 1.2E-14 4E-19 155.8 4.1 129 653-789 150-283 (298)
164 4fdw_A Leucine rich hypothetic 99.5 4.5E-13 1.5E-17 149.3 16.9 242 65-317 135-382 (401)
165 2psq_A Fibroblast growth facto 99.5 8.5E-15 2.9E-19 162.2 2.6 133 641-788 230-363 (370)
166 3lzb_A Epidermal growth factor 99.5 1.5E-14 5.3E-19 157.3 4.5 136 640-790 143-279 (327)
167 1ds9_A Outer arm dynein; leuci 99.5 2.1E-16 7.3E-21 158.7 -9.6 150 66-222 19-185 (198)
168 4hgt_A Casein kinase I isoform 99.5 1.3E-14 4.4E-19 155.2 3.7 139 643-789 134-280 (296)
169 3uzp_A CKI-delta, CKID, casein 99.5 1.4E-14 4.9E-19 154.9 4.0 139 643-789 134-280 (296)
170 2izr_A Casein kinase I isoform 99.5 3.8E-14 1.3E-18 154.4 7.2 137 643-788 134-280 (330)
171 3vhe_A Vascular endothelial gr 99.5 2.4E-14 8.1E-19 157.9 5.6 138 637-788 216-354 (359)
172 1a9n_A U2A', U2A'; complex (nu 99.5 1E-13 3.5E-18 136.2 9.2 131 108-244 14-151 (176)
173 1luf_A Muscle-specific tyrosin 99.5 1.5E-14 5.3E-19 158.3 3.4 135 640-789 200-335 (343)
174 4b99_A Mitogen-activated prote 99.4 1.3E-14 4.3E-19 161.2 2.3 143 636-782 180-344 (398)
175 1qcf_A Haematopoetic cell kina 99.4 1.1E-14 3.7E-19 166.0 1.4 138 637-790 307-445 (454)
176 3kul_A Ephrin type-A receptor 99.4 1.5E-14 5.2E-19 157.2 2.0 136 641-791 178-315 (325)
177 3q4u_A Activin receptor type-1 99.4 3.8E-14 1.3E-18 152.0 5.1 145 636-786 135-299 (301)
178 3g39_A Variable lymphocyte rec 99.4 4.4E-13 1.5E-17 130.8 12.2 108 66-176 10-117 (170)
179 3tt0_A Basic fibroblast growth 99.4 2.9E-14 9.8E-19 158.7 4.0 136 640-790 217-353 (382)
180 2qol_A Ephrin receptor; recept 99.4 1.6E-14 5.5E-19 160.1 1.8 135 641-790 174-310 (373)
181 3cbl_A C-FES, proto-oncogene t 99.4 2.2E-14 7.6E-19 159.3 2.3 132 641-787 240-372 (377)
182 3dbq_A Dual specificity protei 99.4 3.7E-14 1.3E-18 155.3 4.0 126 644-783 138-274 (343)
183 2ozo_A Tyrosine-protein kinase 99.4 5.2E-14 1.8E-18 166.1 5.2 136 637-787 459-596 (613)
184 1opk_A P150, C-ABL, proto-onco 99.4 6.7E-14 2.3E-18 161.1 6.0 137 637-789 341-478 (495)
185 3qup_A Tyrosine-protein kinase 99.4 4.5E-14 1.6E-18 153.2 4.3 135 641-790 164-299 (323)
186 2v62_A Serine/threonine-protei 99.4 5.2E-14 1.8E-18 154.3 4.8 138 643-787 180-326 (345)
187 3v5w_A G-protein coupled recep 99.4 5.9E-14 2E-18 162.9 5.2 130 635-781 313-448 (689)
188 2zmd_A Dual specificity protei 99.4 2.8E-14 9.5E-19 159.2 2.4 126 644-783 185-321 (390)
189 2eva_A TAK1 kinase - TAB1 chim 99.4 6E-14 2E-18 151.2 4.3 130 642-790 133-264 (307)
190 1rjb_A FL cytokine receptor; k 99.4 5.7E-14 1.9E-18 153.9 4.0 140 637-790 195-335 (344)
191 3g39_A Variable lymphocyte rec 99.4 1.1E-12 3.8E-17 127.9 12.7 107 91-200 11-117 (170)
192 2h8h_A Proto-oncogene tyrosine 99.4 3.8E-14 1.3E-18 164.7 2.5 138 637-790 386-524 (535)
193 3l9p_A Anaplastic lymphoma kin 99.4 1.9E-14 6.6E-19 159.2 -0.3 133 643-790 210-346 (367)
194 2r9u_A Variable lymphocyte rec 99.4 1.2E-12 4.1E-17 128.2 12.5 106 68-176 15-120 (174)
195 3s95_A LIMK-1, LIM domain kina 99.4 4.3E-14 1.5E-18 152.4 2.3 136 637-788 131-281 (310)
196 3c1x_A Hepatocyte growth facto 99.4 6.4E-14 2.2E-18 155.1 3.4 134 641-789 219-355 (373)
197 1t46_A HOMO sapiens V-KIT hard 99.4 1E-13 3.5E-18 149.6 4.9 133 642-788 173-306 (313)
198 2i1m_A Macrophage colony-stimu 99.4 8.9E-14 3E-18 151.6 4.5 137 637-787 187-324 (333)
199 4fl3_A Tyrosine-protein kinase 99.4 7.5E-14 2.6E-18 165.2 3.8 135 637-786 492-628 (635)
200 3ugc_A Tyrosine-protein kinase 99.4 1.1E-13 3.8E-18 148.0 4.6 139 641-787 141-289 (295)
201 3brb_A Proto-oncogene tyrosine 99.4 1.2E-13 4.2E-18 149.1 4.6 133 641-788 174-307 (313)
202 3g2f_A Bone morphogenetic prot 99.4 1.1E-13 3.6E-18 151.1 4.1 151 636-790 142-319 (336)
203 3sxs_A Cytoplasmic tyrosine-pr 99.4 1.5E-13 5.2E-18 144.7 5.1 131 642-788 132-263 (268)
204 2xir_A Vascular endothelial gr 99.4 1.9E-13 6.5E-18 147.6 5.9 134 641-788 175-309 (316)
205 3gxj_A TGF-beta receptor type- 99.4 2E-14 6.7E-19 154.3 -2.0 148 636-789 130-297 (303)
206 2ivs_A Proto-oncogene tyrosine 99.4 8.4E-14 2.9E-18 150.3 2.9 132 642-788 178-310 (314)
207 4f9c_A Cell division cycle 7-r 99.4 1.9E-13 6.7E-18 149.9 5.7 78 643-720 146-251 (361)
208 1mp8_A Focal adhesion kinase 1 99.4 7.6E-14 2.6E-18 148.2 2.4 130 642-787 144-274 (281)
209 3uto_A Twitchin; kinase, muscl 99.4 2.6E-13 9E-18 158.1 7.0 116 651-782 294-410 (573)
210 2jii_A Serine/threonine-protei 99.4 1.6E-13 5.3E-18 151.0 4.8 142 642-789 187-336 (352)
211 4f0f_A Serine/threonine-protei 99.4 4.3E-13 1.5E-17 142.8 8.0 117 653-786 168-286 (287)
212 3fxz_A Serine/threonine-protei 99.4 2.3E-13 7.7E-18 145.9 5.8 125 643-782 145-269 (297)
213 3mdy_A Bone morphogenetic prot 99.4 1.6E-13 5.5E-18 149.6 4.7 149 636-790 164-332 (337)
214 3g33_A Cell division protein k 99.4 1.1E-13 3.7E-18 149.1 3.2 140 637-782 143-296 (308)
215 2r9u_A Variable lymphocyte rec 99.4 2.1E-12 7.2E-17 126.4 12.2 105 92-199 15-119 (174)
216 1p4o_A Insulin-like growth fac 99.4 8.1E-14 2.8E-18 151.1 2.2 133 642-789 166-299 (322)
217 4eqm_A Protein kinase; transfe 99.4 1.9E-13 6.6E-18 146.2 5.1 136 642-790 139-276 (294)
218 1mqb_A Ephrin type-A receptor 99.4 1.5E-13 5.2E-18 149.8 3.8 134 642-790 175-310 (333)
219 3p1a_A MYT1 kinase, membrane-a 99.4 1.3E-13 4.3E-18 148.9 2.9 125 637-782 180-304 (311)
220 2pvf_A Fibroblast growth facto 99.4 2E-13 6.9E-18 148.9 4.4 132 643-789 186-318 (334)
221 2c30_A Serine/threonine-protei 99.4 1.8E-13 6.2E-18 148.3 4.0 126 642-782 169-294 (321)
222 1b6c_B TGF-B superfamily recep 99.4 2.4E-13 8.4E-18 148.6 5.1 146 637-788 170-335 (342)
223 1k9a_A Carboxyl-terminal SRC k 99.4 3.4E-13 1.2E-17 153.4 6.4 127 641-787 316-443 (450)
224 3dtc_A Mitogen-activated prote 99.4 1.7E-13 5.7E-18 144.6 3.5 119 650-786 152-270 (271)
225 3cc6_A Protein tyrosine kinase 99.4 3.4E-13 1.2E-17 143.1 5.7 129 643-787 142-271 (281)
226 4hcu_A Tyrosine-protein kinase 99.4 1.8E-13 6.3E-18 144.2 3.5 130 642-787 134-264 (269)
227 3lxl_A Tyrosine-protein kinase 99.4 9.9E-14 3.4E-18 150.8 1.5 141 642-790 155-304 (327)
228 2y4i_B KSR2, HKSR2, kinase sup 99.4 8.8E-13 3E-17 142.6 8.9 133 643-792 159-305 (319)
229 3lxp_A Non-receptor tyrosine-p 99.4 1.3E-14 4.5E-19 157.2 -5.6 137 643-788 163-309 (318)
230 3h4j_B AMPK kdaid, SNF1-like p 99.4 2.2E-13 7.4E-18 148.5 3.9 124 638-782 132-258 (336)
231 3kfa_A Tyrosine-protein kinase 99.3 5.7E-13 2E-17 141.8 6.9 131 642-788 139-270 (288)
232 1qpc_A LCK kinase; alpha beta 99.3 1.7E-13 6E-18 145.2 2.7 131 643-789 138-269 (279)
233 3niz_A Rhodanese family protei 99.3 3.4E-13 1.2E-17 145.5 4.7 136 642-782 147-300 (311)
234 3tki_A Serine/threonine-protei 99.3 2.9E-13 9.8E-18 146.9 4.0 128 643-783 134-262 (323)
235 3ll6_A Cyclin G-associated kin 99.3 2.9E-13 9.8E-18 147.5 3.9 132 640-789 164-308 (337)
236 3gen_A Tyrosine-protein kinase 99.3 2.4E-13 8.3E-18 144.4 2.9 130 642-787 148-278 (283)
237 1xbb_A Tyrosine-protein kinase 99.3 5.4E-13 1.8E-17 142.4 5.5 132 642-788 145-278 (291)
238 3oz6_A Mitogen-activated prote 99.3 1.3E-13 4.5E-18 153.7 0.6 82 640-721 135-236 (388)
239 3kn6_A Ribosomal protein S6 ki 99.3 2.8E-13 9.7E-18 147.1 3.1 133 643-782 135-270 (325)
240 3q60_A ROP5B; pseudokinase, tr 99.3 2.4E-13 8.1E-18 150.7 2.5 133 637-782 217-352 (371)
241 1u59_A Tyrosine-protein kinase 99.3 4.5E-13 1.5E-17 142.7 4.5 134 642-790 138-273 (287)
242 3ttj_A Mitogen-activated prote 99.3 5.9E-13 2E-17 151.8 5.6 143 637-782 187-355 (464)
243 3zgw_A Maternal embryonic leuc 99.3 4.8E-13 1.7E-17 146.3 4.7 124 642-782 136-260 (347)
244 3fe3_A MAP/microtubule affinit 99.3 4.7E-13 1.6E-17 145.4 4.4 123 641-782 141-264 (328)
245 2yfx_A Tyrosine-protein kinase 99.3 2.2E-13 7.4E-18 148.1 1.6 123 652-789 181-304 (327)
246 3byv_A Rhoptry kinase; malaria 99.3 2.2E-13 7.5E-18 151.3 1.6 120 637-782 229-359 (377)
247 2h34_A Serine/threonine-protei 99.3 4.1E-13 1.4E-17 144.7 3.6 134 643-790 163-297 (309)
248 1wak_A Serine/threonine-protei 99.3 5.9E-13 2E-17 148.7 5.0 126 652-782 234-391 (397)
249 4euu_A Serine/threonine-protei 99.3 1.3E-12 4.4E-17 141.5 7.5 137 648-787 150-307 (319)
250 3e7e_A HBUB1, BUB1A, mitotic c 99.3 8.6E-13 3E-17 145.8 6.2 118 650-788 219-338 (365)
251 3mtl_A Cell division protein k 99.3 5.4E-13 1.9E-17 144.8 4.2 137 641-782 127-281 (324)
252 3ork_A Serine/threonine protei 99.3 4.4E-13 1.5E-17 144.6 3.5 132 642-785 144-277 (311)
253 2zv2_A Calcium/calmodulin-depe 99.3 1.2E-12 4E-17 140.3 6.7 125 642-782 165-292 (298)
254 3llt_A Serine/threonine kinase 99.3 1.7E-13 5.9E-18 151.1 0.1 67 650-721 198-264 (360)
255 1ob3_A PFPK5, cell division co 99.3 5.8E-13 2E-17 141.9 4.2 136 642-782 128-280 (288)
256 1u46_A ACK-1, activated CDC42 99.3 4.5E-13 1.5E-17 142.8 3.1 132 642-787 149-282 (291)
257 2vx3_A Dual specificity tyrosi 99.3 1.1E-12 3.7E-17 145.9 6.3 74 643-721 188-263 (382)
258 2wqm_A Serine/threonine-protei 99.3 1.4E-12 4.7E-17 140.6 6.9 132 643-788 165-296 (310)
259 3f66_A Hepatocyte growth facto 99.3 6.2E-13 2.1E-17 142.4 4.0 133 642-789 156-291 (298)
260 3cek_A Dual specificity protei 99.3 4.4E-13 1.5E-17 144.7 2.8 125 644-782 157-292 (313)
261 3kvw_A DYRK2, dual specificity 99.3 8.1E-13 2.8E-17 149.2 5.1 74 643-721 229-304 (429)
262 1u5q_A Serine/threonine protei 99.3 8.9E-13 3E-17 144.5 5.2 122 641-783 181-306 (348)
263 3kmu_A ILK, integrin-linked ki 99.3 9.4E-13 3.2E-17 138.6 5.1 124 643-787 142-268 (271)
264 2eue_A Carbon catabolite derep 99.3 3.4E-13 1.2E-17 142.6 1.7 122 642-782 140-262 (275)
265 3t9t_A Tyrosine-protein kinase 99.3 5.9E-13 2E-17 139.9 3.6 130 642-787 132-262 (267)
266 1byg_A CSK, protein (C-termina 99.3 1.3E-12 4.5E-17 138.3 6.3 124 643-786 146-270 (278)
267 2y0a_A Death-associated protei 99.3 4.3E-13 1.5E-17 145.7 2.5 116 652-782 156-271 (326)
268 3lm5_A Serine/threonine-protei 99.3 5.5E-13 1.9E-17 145.0 3.3 124 644-782 161-287 (327)
269 3soa_A Calcium/calmodulin-depe 99.3 1E-12 3.4E-17 148.7 5.5 126 643-782 139-267 (444)
270 4aaa_A Cyclin-dependent kinase 99.3 5.1E-13 1.7E-17 145.5 2.9 139 642-782 152-306 (331)
271 2pmi_A Negative RE, cyclin-dep 99.3 8.4E-13 2.9E-17 142.8 4.6 136 642-782 136-293 (317)
272 3dzo_A Rhoptry kinase domain; 99.3 5.9E-13 2E-17 149.6 3.5 120 636-781 233-362 (413)
273 1tki_A Titin; serine kinase, m 99.3 4.6E-13 1.6E-17 145.2 2.4 123 644-782 132-257 (321)
274 3e3p_A Protein kinase, putativ 99.3 1.4E-12 4.9E-17 143.6 6.4 136 642-782 159-314 (360)
275 2w4o_A Calcium/calmodulin-depe 99.3 7.2E-13 2.5E-17 145.4 3.9 125 644-782 178-305 (349)
276 4e5w_A Tyrosine-protein kinase 99.3 5.1E-14 1.7E-18 151.1 -5.3 139 641-787 153-300 (302)
277 3dls_A PAS domain-containing s 99.3 1.2E-12 4.3E-17 142.6 5.7 118 641-783 157-275 (335)
278 1nxk_A MAP kinase-activated pr 99.3 1.7E-12 5.8E-17 145.1 6.8 129 643-783 190-322 (400)
279 4agu_A Cyclin-dependent kinase 99.3 2.1E-12 7.3E-17 139.1 7.3 138 643-782 131-284 (311)
280 1fvr_A Tyrosine-protein kinase 99.3 7.1E-13 2.4E-17 144.0 3.5 131 641-790 169-301 (327)
281 2j0j_A Focal adhesion kinase 1 99.3 5E-13 1.7E-17 158.7 2.4 132 640-787 517-649 (656)
282 1o6l_A RAC-beta serine/threoni 99.3 1.6E-12 5.4E-17 141.7 6.2 123 642-782 133-260 (337)
283 1q8y_A SR protein kinase; tran 99.3 1.1E-12 3.8E-17 145.2 5.0 127 651-782 175-333 (373)
284 3mi9_A Cell division protein k 99.3 1E-12 3.5E-17 144.3 4.7 140 642-782 152-311 (351)
285 4fr4_A YANK1, serine/threonine 99.3 9.5E-13 3.2E-17 145.9 4.4 126 641-782 142-271 (384)
286 2rio_A Serine/threonine-protei 99.3 2.1E-12 7.1E-17 146.1 7.2 119 652-782 166-295 (434)
287 2eu9_A Dual specificity protei 99.3 9.5E-13 3.3E-17 144.5 4.1 129 649-782 177-333 (355)
288 3o0g_A Cell division protein k 99.3 7.6E-13 2.6E-17 141.3 3.2 137 642-782 129-282 (292)
289 1blx_A Cyclin-dependent kinase 99.3 8.4E-13 2.9E-17 143.2 3.4 134 643-782 149-296 (326)
290 2a19_B Interferon-induced, dou 99.3 4.1E-13 1.4E-17 142.5 0.8 125 642-789 150-274 (284)
291 1z57_A Dual specificity protei 99.3 1.1E-12 3.7E-17 143.0 4.2 126 652-782 175-328 (339)
292 3pls_A Macrophage-stimulating 99.3 1.6E-12 5.4E-17 139.1 5.3 134 642-789 152-287 (298)
293 2vwi_A Serine/threonine-protei 99.3 1.1E-12 3.8E-17 140.5 4.1 134 643-782 150-287 (303)
294 4dc2_A Protein kinase C IOTA t 99.3 1.5E-12 5.2E-17 144.8 5.3 126 641-777 180-307 (396)
295 3p23_A Serine/threonine-protei 99.3 1.9E-12 6.4E-17 146.2 6.1 120 650-782 159-283 (432)
296 2xrw_A Mitogen-activated prote 99.3 3E-12 1E-16 141.7 7.5 138 642-782 155-318 (371)
297 2yab_A Death-associated protei 99.3 1.4E-12 4.8E-17 143.5 4.7 116 652-782 157-272 (361)
298 4ejn_A RAC-alpha serine/threon 99.3 1.8E-12 6.1E-17 147.3 5.5 124 641-782 276-404 (446)
299 2yex_A Serine/threonine-protei 99.3 1.3E-12 4.4E-17 138.1 4.0 127 643-782 134-261 (276)
300 2bdw_A Hypothetical protein K1 99.3 1E-12 3.6E-17 144.8 3.4 116 652-782 169-284 (362)
301 1j1b_A Glycogen synthase kinas 99.3 4.7E-12 1.6E-16 142.6 8.5 135 643-782 185-336 (420)
302 3fdn_A Serine/threonine-protei 99.3 2.4E-12 8.1E-17 136.4 5.7 120 643-782 138-257 (279)
303 2x4f_A Myosin light chain kina 99.3 1.4E-12 4.8E-17 144.4 4.0 124 644-782 217-342 (373)
304 3c0i_A Peripheral plasma membr 99.3 1.5E-12 5.1E-17 143.0 4.2 115 653-782 172-286 (351)
305 1kob_A Twitchin; kinase, intra 99.3 2.4E-12 8.1E-17 143.0 5.6 124 644-783 179-305 (387)
306 3a7i_A MST3 kinase, serine/thr 99.3 2E-12 6.8E-17 138.8 4.8 124 643-783 148-271 (303)
307 3hko_A Calcium/calmodulin-depe 99.3 1.8E-12 6.3E-17 141.8 4.6 127 644-782 198-330 (345)
308 1ua2_A CAK, cell division prot 99.3 1.6E-12 5.6E-17 142.4 4.0 138 642-784 140-293 (346)
309 3i6u_A CDS1, serine/threonine- 99.3 1.5E-12 5E-17 146.7 3.7 118 651-782 279-399 (419)
310 3is5_A Calcium-dependent prote 99.3 1.6E-12 5.6E-17 138.2 3.8 115 651-782 164-278 (285)
311 3fme_A Dual specificity mitoge 99.3 1.1E-12 3.8E-17 139.7 2.4 124 643-782 139-266 (290)
312 3kk8_A Calcium/calmodulin depe 99.3 2E-12 7E-17 137.2 4.4 115 653-782 147-261 (284)
313 4eut_A Serine/threonine-protei 99.3 1.1E-12 3.8E-17 146.6 2.4 139 648-789 150-309 (396)
314 3txo_A PKC-L, NPKC-ETA, protei 99.3 1.5E-12 5.2E-17 142.8 3.5 119 641-777 151-269 (353)
315 2qr7_A Ribosomal protein S6 ki 99.2 2E-12 6.9E-17 141.3 4.3 120 652-782 158-277 (342)
316 2w1i_A JAK2; chromosomal rearr 99.2 1.4E-12 4.7E-17 141.7 2.9 138 642-787 173-320 (326)
317 4aw2_A Serine/threonine-protei 99.2 6.6E-12 2.3E-16 141.5 8.3 131 640-782 201-338 (437)
318 3cok_A Serine/threonine-protei 99.2 1.9E-12 6.4E-17 137.1 3.6 122 643-782 141-262 (278)
319 2a2a_A Death-associated protei 99.2 2.7E-12 9.3E-17 139.0 5.0 124 644-782 145-272 (321)
320 2w5a_A Serine/threonine-protei 99.2 2E-13 6.7E-18 144.7 -4.1 126 643-785 145-270 (279)
321 2wtk_C Serine/threonine-protei 99.2 4.9E-12 1.7E-16 135.8 6.7 125 643-783 138-264 (305)
322 1xjd_A Protein kinase C, theta 99.2 1.3E-12 4.6E-17 142.7 2.3 122 642-781 146-268 (345)
323 2y94_A 5'-AMP-activated protei 99.2 6.5E-12 2.2E-16 143.1 8.0 126 642-786 144-272 (476)
324 3qd2_B Eukaryotic translation 99.2 1.6E-12 5.6E-17 141.2 2.8 125 641-782 191-325 (332)
325 3aln_A Dual specificity mitoge 99.2 1.3E-12 4.3E-17 142.1 1.9 127 642-782 154-285 (327)
326 3gbz_A Kinase, CMGC CDK; ssgci 99.2 2.8E-12 9.6E-17 139.5 4.6 126 652-782 175-318 (329)
327 3rp9_A Mitogen-activated prote 99.2 2.9E-12 9.9E-17 146.1 5.0 76 637-712 179-280 (458)
328 4exu_A Mitogen-activated prote 99.2 1.7E-12 5.8E-17 143.8 2.7 134 641-782 171-323 (371)
329 2b9h_A MAP kinase FUS3, mitoge 99.2 1.7E-12 5.8E-17 142.6 2.7 138 642-782 140-305 (353)
330 1cm8_A Phosphorylated MAP kina 99.2 3E-12 1E-16 141.5 4.6 134 641-782 155-307 (367)
331 4e7w_A Glycogen synthase kinas 99.2 2.6E-12 8.9E-17 143.4 4.1 135 643-782 170-321 (394)
332 2fst_X Mitogen-activated prote 99.2 1.1E-12 3.8E-17 144.9 1.0 133 642-782 160-311 (367)
333 1t4h_A Serine/threonine-protei 99.2 6.2E-12 2.1E-16 134.0 6.7 122 643-782 160-282 (290)
334 3rgf_A Cyclin-dependent kinase 99.2 5.4E-12 1.8E-16 141.4 6.5 77 643-719 157-239 (405)
335 4fvq_A Tyrosine-protein kinase 99.2 1.6E-12 5.4E-17 138.5 2.0 115 653-789 160-275 (289)
336 3a8x_A Protein kinase C IOTA t 99.2 2.9E-12 1E-16 140.2 4.1 125 642-777 138-264 (345)
337 1rdq_E PKA C-alpha, CAMP-depen 99.2 3.5E-12 1.2E-16 139.8 4.7 120 642-782 169-293 (350)
338 3coi_A Mitogen-activated prote 99.2 2.9E-12 9.9E-17 140.8 4.0 133 642-782 154-305 (353)
339 2clq_A Mitogen-activated prote 99.2 3.5E-12 1.2E-16 136.2 4.6 125 643-782 151-278 (295)
340 3pfq_A PKC-B, PKC-beta, protei 99.2 4E-12 1.4E-16 151.5 5.5 124 636-777 464-587 (674)
341 3a62_A Ribosomal protein S6 ki 99.2 4.7E-12 1.6E-16 137.6 5.6 128 637-782 144-276 (327)
342 2ifg_A High affinity nerve gro 99.2 1.3E-11 4.4E-16 135.2 9.1 104 70-176 13-118 (347)
343 2i0e_A Protein kinase C-beta I 99.2 4.2E-12 1.4E-16 139.3 5.1 118 642-777 149-266 (353)
344 3qyz_A Mitogen-activated prote 99.2 1.3E-12 4.5E-17 144.2 1.1 138 642-782 156-313 (364)
345 3bhy_A Death-associated protei 99.2 2E-12 6.8E-17 137.2 2.4 116 652-782 150-265 (283)
346 3gni_B Strad alpha; kinase fol 99.2 3.4E-12 1.2E-16 142.3 4.3 79 642-720 156-241 (389)
347 2acx_A G protein-coupled recep 99.2 2.5E-12 8.6E-17 148.7 3.3 127 641-782 313-444 (576)
348 2r5t_A Serine/threonine-protei 99.2 2.7E-12 9.3E-17 141.8 3.4 125 642-784 167-291 (373)
349 2rku_A Serine/threonine-protei 99.2 3.1E-12 1.1E-16 136.7 3.7 122 643-782 144-265 (294)
350 2owb_A Serine/threonine-protei 99.2 2.6E-12 9E-17 140.1 3.2 123 642-782 169-291 (335)
351 3v8s_A RHO-associated protein 99.2 4E-12 1.4E-16 142.1 4.5 130 641-783 195-330 (410)
352 2buj_A Serine/threonine-protei 99.2 6.9E-13 2.4E-17 143.4 -1.7 134 642-788 162-305 (317)
353 2vgo_A Serine/threonine-protei 99.2 5.5E-12 1.9E-16 134.0 5.3 120 643-782 143-262 (284)
354 2y7j_A Phosphorylase B kinase 99.2 2.9E-12 9.8E-17 141.5 3.2 125 643-782 229-359 (365)
355 2r3i_A Cell division protein k 99.2 2.5E-12 8.5E-17 137.7 2.5 136 643-782 132-283 (299)
356 3an0_A Dual specificity mitoge 99.2 1.1E-12 3.7E-17 143.4 -0.4 127 640-782 180-310 (340)
357 1fot_A TPK1 delta, CAMP-depend 99.2 6.6E-12 2.3E-16 135.7 5.7 120 642-782 134-258 (318)
358 3pg1_A Mitogen-activated prote 99.2 4.7E-12 1.6E-16 139.6 4.5 135 642-782 162-316 (362)
359 3com_A Serine/threonine-protei 99.2 3.5E-12 1.2E-16 137.6 3.3 125 643-782 154-278 (314)
360 2x7f_A TRAF2 and NCK-interacti 99.2 6.1E-12 2.1E-16 136.4 5.0 123 643-782 158-286 (326)
361 2jam_A Calcium/calmodulin-depe 99.2 7.3E-12 2.5E-16 134.5 5.4 119 648-782 143-261 (304)
362 1vzo_A Ribosomal protein S6 ki 99.2 2.8E-12 9.7E-17 141.0 2.2 131 641-784 186-323 (355)
363 2h6d_A 5'-AMP-activated protei 99.2 7.9E-12 2.7E-16 132.0 5.5 121 643-782 140-261 (276)
364 3nsz_A CK II alpha, casein kin 99.2 2.7E-12 9.2E-17 139.5 1.8 134 643-782 159-319 (330)
365 3uc3_A Serine/threonine-protei 99.2 1.1E-11 3.9E-16 136.5 6.8 126 644-782 146-274 (361)
366 2vd5_A DMPK protein; serine/th 99.2 5.6E-12 1.9E-16 141.0 4.2 129 641-782 189-327 (412)
367 3c4z_A Rhodopsin kinase; Ser/T 99.2 4.2E-12 1.4E-16 146.5 3.0 124 641-778 316-439 (543)
368 2dyl_A Dual specificity mitoge 99.2 7.4E-12 2.5E-16 135.2 4.8 125 643-782 154-283 (318)
369 3f3z_A Calcium/calmodulin-depe 99.2 4.7E-12 1.6E-16 133.9 3.0 121 644-782 136-261 (277)
370 2ac3_A MAP kinase-interacting 99.2 1E-12 3.5E-17 141.9 -2.2 125 653-782 153-295 (316)
371 3eb0_A Putative uncharacterize 99.2 1.2E-11 4.1E-16 137.5 6.3 134 643-782 170-321 (383)
372 3a99_A Proto-oncogene serine/t 99.2 4.5E-12 1.5E-16 137.3 2.7 114 643-782 178-293 (320)
373 3n9x_A Phosphotransferase; mal 99.2 7.3E-12 2.5E-16 141.6 4.5 77 640-716 155-252 (432)
374 3eqc_A Dual specificity mitoge 99.2 5.5E-12 1.9E-16 139.0 3.3 74 643-720 161-234 (360)
375 3un9_A NLR family member X1; l 99.2 5.3E-13 1.8E-17 147.3 -4.9 134 89-222 72-224 (372)
376 3fhr_A MAP kinase-activated pr 99.2 8.5E-12 2.9E-16 136.1 4.1 119 652-782 169-287 (336)
377 2i6l_A Mitogen-activated prote 99.2 2E-12 6.7E-17 139.8 -1.4 137 643-782 149-305 (320)
378 1x8b_A WEE1HU, WEE1-like prote 99.2 5.6E-12 1.9E-16 133.9 1.9 107 652-782 172-279 (289)
379 3mwu_A Calmodulin-domain prote 99.2 1.5E-11 5.3E-16 141.2 5.7 117 650-782 160-276 (486)
380 2ifg_A High affinity nerve gro 99.2 5.6E-11 1.9E-15 130.1 9.9 103 93-198 12-116 (347)
381 2pml_X PFPK7, Ser/Thr protein 99.1 8.5E-12 2.9E-16 136.7 2.6 131 642-782 180-322 (348)
382 3lij_A Calcium/calmodulin depe 99.1 1.1E-11 3.8E-16 142.6 3.7 115 652-782 177-291 (494)
383 2ycf_A Serine/threonine-protei 99.1 4.7E-12 1.6E-16 137.2 -0.0 116 653-782 156-274 (322)
384 2j7t_A Serine/threonine-protei 99.1 5.3E-12 1.8E-16 135.3 0.1 125 643-782 146-275 (302)
385 2iwi_A Serine/threonine-protei 99.1 2.2E-11 7.6E-16 131.2 4.9 114 643-782 168-283 (312)
386 3un9_A NLR family member X1; l 99.1 1.3E-12 4.3E-17 144.2 -5.3 41 278-318 208-252 (372)
387 1phk_A Phosphorylase kinase; g 99.1 1.7E-11 5.7E-16 131.1 3.4 125 643-782 153-283 (298)
388 3nyv_A Calmodulin-domain prote 99.1 9E-12 3.1E-16 143.1 0.6 118 649-782 164-281 (484)
389 3q5i_A Protein kinase; CDPK, m 99.1 1.9E-11 6.5E-16 141.1 2.9 114 652-782 187-301 (504)
390 1zy4_A Serine/threonine-protei 99.1 3.5E-11 1.2E-15 128.7 3.5 126 643-782 145-283 (303)
391 3qa8_A MGC80376 protein; kinas 99.0 5.2E-11 1.8E-15 139.3 3.2 129 643-779 150-294 (676)
392 2wei_A Calmodulin-domain prote 99.0 4E-11 1.4E-15 127.5 1.7 115 652-782 162-276 (287)
393 3uqc_A Probable conserved tran 99.0 3.5E-10 1.2E-14 120.1 5.5 92 678-789 171-265 (286)
394 2pzi_A Probable serine/threoni 98.9 3.6E-10 1.2E-14 135.3 3.6 114 643-786 211-325 (681)
395 4fs7_A Uncharacterized protein 98.9 2E-08 6.7E-13 111.9 16.5 83 226-313 246-328 (394)
396 2ra8_A Uncharacterized protein 98.8 7.5E-10 2.5E-14 121.0 3.1 103 64-169 106-227 (362)
397 2ra8_A Uncharacterized protein 98.8 1E-09 3.5E-14 120.0 2.5 63 280-342 251-322 (362)
398 4gt6_A Cell surface protein; l 98.8 5.2E-08 1.8E-12 108.4 16.0 262 67-339 66-369 (394)
399 4fs7_A Uncharacterized protein 98.7 1.5E-07 5.1E-12 104.7 16.3 220 106-337 155-376 (394)
400 3m2w_A MAP kinase-activated pr 98.7 1.1E-08 3.9E-13 109.1 4.9 103 644-782 147-256 (299)
401 4gt6_A Cell surface protein; l 98.6 3.9E-07 1.3E-11 101.3 14.9 264 66-339 88-390 (394)
402 1io0_A Tropomodulin; LRR prote 98.4 4.1E-08 1.4E-12 96.7 0.6 117 81-197 28-163 (185)
403 4h09_A Hypothetical leucine ri 98.4 6.2E-06 2.1E-10 91.0 16.9 259 66-337 47-343 (379)
404 1io0_A Tropomodulin; LRR prote 98.3 8.3E-08 2.9E-12 94.5 0.6 116 106-221 29-163 (185)
405 3rw6_A Nuclear RNA export fact 98.3 7.8E-08 2.7E-12 99.7 -0.6 77 161-239 170-257 (267)
406 3rw6_A Nuclear RNA export fact 98.2 7.8E-07 2.7E-11 92.1 4.2 104 85-191 137-257 (267)
407 2vuw_A Serine/threonine-protei 98.2 5.7E-07 2E-11 97.5 2.8 58 652-717 220-278 (336)
408 4h09_A Hypothetical leucine ri 98.1 5.5E-05 1.9E-09 83.3 16.6 239 66-315 70-343 (379)
409 3e4g_A ATP synthase subunit S, 97.8 3.5E-06 1.2E-10 80.9 1.3 82 90-171 62-149 (176)
410 3e4g_A ATP synthase subunit S, 97.8 1.1E-05 3.7E-10 77.5 3.3 83 113-195 61-149 (176)
411 1pgv_A TMD-1, tropomodulin TMD 97.1 0.00014 4.9E-09 71.1 2.3 88 84-171 36-136 (197)
412 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00027 9.3E-09 69.1 1.4 67 109-175 37-112 (197)
413 4azs_A Methyltransferase WBDD; 96.8 1.6E-05 5.4E-10 92.4 -9.3 76 635-713 360-435 (569)
414 3rfe_A Platelet glycoprotein I 96.1 0.0096 3.3E-07 54.2 6.7 55 69-125 12-67 (130)
415 3rfe_A Platelet glycoprotein I 95.8 0.011 3.8E-07 53.7 6.0 57 92-150 11-68 (130)
416 2jwp_A Malectin, MGC80075; sug 95.5 0.03 1E-06 53.7 7.7 91 456-555 52-142 (174)
417 3en9_A Glycoprotease, O-sialog 92.9 0.003 1E-07 72.7 -6.7 80 636-717 453-539 (540)
418 2ks1_B Epidermal growth factor 71.8 0.92 3.1E-05 31.9 0.3 26 601-626 12-37 (44)
419 2nru_A Interleukin-1 receptor- 71.6 2 7E-05 44.5 3.2 34 644-677 13-52 (307)
420 2l2t_A Receptor tyrosine-prote 64.1 1.3 4.3E-05 31.2 -0.3 26 601-626 11-36 (44)
421 3uim_A Brassinosteroid insensi 58.3 4.5 0.00015 42.2 2.7 35 643-677 17-51 (326)
422 3omv_A RAF proto-oncogene seri 53.4 5.1 0.00018 41.8 2.1 21 656-676 36-56 (307)
423 4gt4_A Tyrosine-protein kinase 47.5 4.6 0.00016 42.2 0.5 20 657-676 27-46 (308)
424 4aoj_A High affinity nerve gro 46.6 4.7 0.00016 42.5 0.5 21 656-676 41-61 (329)
425 2jwa_A Receptor tyrosine-prote 45.2 3.9 0.00013 28.7 -0.3 24 603-626 14-37 (44)
426 4asz_A BDNF/NT-3 growth factor 44.1 5.3 0.00018 41.5 0.4 21 656-676 13-33 (299)
427 4aw2_A Serine/threonine-protei 42.7 3.5 0.00012 45.6 -1.4 30 647-676 65-94 (437)
428 3hmm_A TGF-beta receptor type- 41.2 6.2 0.00021 41.0 0.3 20 657-676 4-23 (303)
429 4g31_A Eukaryotic translation 41.1 5.1 0.00018 41.6 -0.3 22 655-676 4-25 (299)
430 2c30_A Serine/threonine-protei 38.8 9.5 0.00033 39.7 1.3 33 644-676 23-65 (321)
431 2lz0_A Uncharacterized protein 38.3 61 0.0021 27.1 6.1 43 102-145 9-51 (100)
432 2qkw_B Protein kinase; three-h 38.3 5.3 0.00018 41.6 -0.8 30 649-678 32-61 (321)
433 3hyh_A Carbon catabolite-derep 37.2 9.5 0.00033 39.0 1.0 22 655-676 12-33 (275)
434 4ase_A Vascular endothelial gr 36.5 7 0.00024 41.7 -0.2 26 651-676 59-84 (353)
435 4f9c_A Cell division cycle 7-r 35.2 9.9 0.00034 40.6 0.8 22 655-676 20-41 (361)
436 2yle_A Protein spire homolog 1 34.8 72 0.0025 31.2 6.7 30 681-711 102-131 (229)
437 4aw0_A HPDK1, 3-phosphoinositi 32.9 9.5 0.00032 39.8 0.1 21 656-676 32-52 (311)
438 2k1k_A Ephrin type-A receptor 32.0 9.2 0.00031 25.9 -0.1 12 601-612 11-22 (38)
439 4b9d_A Serine/threonine-protei 29.5 14 0.00049 39.1 0.8 22 655-676 23-44 (350)
440 3fpq_A Serine/threonine-protei 29.0 16 0.00053 37.7 1.0 17 660-676 30-46 (290)
441 3ubd_A Ribosomal protein S6 ki 29.0 12 0.00042 38.8 0.1 21 656-676 24-44 (304)
442 3v8s_A RHO-associated protein 28.2 12 0.00039 40.9 -0.2 29 648-676 61-89 (410)
443 3v5w_A G-protein coupled recep 27.8 15 0.00051 42.7 0.6 22 655-676 188-209 (689)
444 3e3p_A Protein kinase, putativ 27.0 20 0.00069 37.6 1.5 29 648-676 15-43 (360)
445 2lz0_A Uncharacterized protein 26.8 1.1E+02 0.0038 25.5 5.8 46 77-123 8-53 (100)
446 4g3f_A NF-kappa-beta-inducing 26.6 13 0.00045 39.1 -0.1 22 655-676 57-78 (336)
447 3p1a_A MYT1 kinase, membrane-a 25.9 5 0.00017 41.7 -3.6 22 656-677 57-78 (311)
448 2vd5_A DMPK protein; serine/th 25.6 11 0.00038 41.0 -0.9 31 646-676 51-81 (412)
449 4b99_A Mitogen-activated prote 24.6 19 0.00066 38.9 0.7 21 656-676 54-74 (398)
450 3pg1_A Mitogen-activated prote 24.5 25 0.00085 37.0 1.6 31 647-677 13-43 (362)
451 1xjd_A Protein kinase C, theta 23.4 20 0.0007 37.7 0.6 25 652-676 13-37 (345)
452 4fih_A Serine/threonine-protei 22.5 22 0.00076 37.5 0.7 20 657-676 75-94 (346)
453 2k9y_A Ephrin type-A receptor 22.0 16 0.00054 25.1 -0.4 11 602-612 15-25 (41)
454 3kex_A Receptor tyrosine-prote 20.8 29 0.00098 36.0 1.1 21 656-676 13-33 (325)
455 3fdn_A Serine/threonine-protei 20.7 22 0.00077 35.7 0.2 23 654-676 7-29 (279)
456 3lb7_A RAF proto-oncogene seri 20.7 30 0.001 35.5 1.3 22 656-677 36-57 (307)
457 3g33_A Cell division protein k 20.6 33 0.0011 35.1 1.5 23 654-676 7-29 (308)
458 3op5_A Serine/threonine-protei 20.4 27 0.00091 36.9 0.8 23 655-677 34-56 (364)
459 3eb0_A Putative uncharacterize 20.2 29 0.001 37.0 1.0 24 653-676 4-27 (383)
No 1
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.4e-39 Score=350.57 Aligned_cols=294 Identities=30% Similarity=0.491 Sum_probs=241.1
Q ss_pred CHHHHHHHHHHHHhCCCC-CCCCCcCCCCCCCCCCCCCcccCCCCCCCCCCeeccccCCCCCeeeEEEEEEcccCcCC--
Q 038019 3 DKHAVRALNSILQQWDAP-AVPLWNISGNPCSGSALNATDSEFESPNNNPAIVCNCTFDNGATCHITKLRVYGLNKKG-- 79 (866)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~-~~~~w~~~~~~C~~~~~~~~~~~~~~~~~~~~v~C~~~~~~~~~~~v~~L~l~~~~l~~-- 79 (866)
+++|++||++||+++.++ .+.+|+.+.+||.+ .| .||.|+... ...+|+.|++++|++++
T Consensus 4 ~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~--~w------------~gv~C~~~~---~~~~l~~L~L~~~~l~~~~ 66 (313)
T 1ogq_A 4 NPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNR--TW------------LGVLCDTDT---QTYRVNNLDLSGLNLPKPY 66 (313)
T ss_dssp CHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTT--CS------------TTEEECCSS---SCCCEEEEEEECCCCSSCE
T ss_pred CHHHHHHHHHHHHhcCCcccccCCCCCCCCCcC--CC------------cceEeCCCC---CCceEEEEECCCCCccCCc
Confidence 589999999999999766 46789877889942 25 799997431 12589999999999999
Q ss_pred CCCcccCCCCCCCEEEccC-CCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhc
Q 038019 80 VIPEELVTLQYLTVLKIDQ-NFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELG 158 (866)
Q Consensus 80 ~~p~~l~~l~~L~~L~Ls~-n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 158 (866)
.+|..|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++|+|++|.+++.+|..+.
T Consensus 67 ~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 146 (313)
T 1ogq_A 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146 (313)
T ss_dssp ECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGG
T ss_pred ccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHh
Confidence 8999999999999999995 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccEEEeecCCCCCCChhhhhcCc-CCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCE
Q 038019 159 NLAKLEQLYIDSCGAGGEIPSTFAKLR-NMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLES 237 (866)
Q Consensus 159 ~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 237 (866)
.+++|++|+|++|.+++.+|..+..++ +|++|++++|++++.+|..+..++ |+.|+|++|.+++.+|..|..+++|+.
T Consensus 147 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 225 (313)
T 1ogq_A 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQK 225 (313)
T ss_dssp GCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSE
T ss_pred cCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCE
Confidence 999999999999999999999999998 999999999999989999999887 999999999999888888888888888
Q ss_pred EEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCC
Q 038019 238 LQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNS 316 (866)
Q Consensus 238 L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 316 (866)
|++++|.+.... +.+..+++|++|+|++|.+++.+|..+..+++|+.|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 226 L~L~~N~l~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 226 IHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp EECCSSEECCBG-GGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred EECCCCceeeec-CcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 877776654222 22445556666666666666555555555666666666666665555554 455555555555555
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.4e-38 Score=379.37 Aligned_cols=333 Identities=20% Similarity=0.264 Sum_probs=289.4
Q ss_pred HHHHHHHHHHHHhCCCCC----------CCCCcCCCCCCCCCCCCCcccCCCCCCCCCCeeccccCCCCCeeeEEEEEEc
Q 038019 4 KHAVRALNSILQQWDAPA----------VPLWNISGNPCSGSALNATDSEFESPNNNPAIVCNCTFDNGATCHITKLRVY 73 (866)
Q Consensus 4 ~~~~~~l~~~~~~~~~~~----------~~~w~~~~~~C~~~~~~~~~~~~~~~~~~~~v~C~~~~~~~~~~~v~~L~l~ 73 (866)
..|++||.+++.+++.+. ..+|+.+.++|. |+ .+.||.|+.. .+|+.|+|.
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~----w~---------~~~GV~C~~~------~~V~~L~L~ 89 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDM----WG---------AQPGVSLNSN------GRVTGLSLE 89 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGG----TT---------CCTTEEECTT------CCEEEEECT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCccc----cc---------CCCCeEEcCC------CCEEEEEec
Confidence 469999999999986443 124555555552 31 1279999742 589999999
Q ss_pred ccCcCCCCCcccCCCCCCCEEEccCCC-----------------------------------------------------
Q 038019 74 GLNKKGVIPEELVTLQYLTVLKIDQNF----------------------------------------------------- 100 (866)
Q Consensus 74 ~~~l~~~~p~~l~~l~~L~~L~Ls~n~----------------------------------------------------- 100 (866)
++++.|.+|++|++|++|++|+|++|.
T Consensus 90 ~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~ 169 (636)
T 4eco_A 90 GFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSD 169 (636)
T ss_dssp TSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHC
T ss_pred CcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcC
Confidence 999999999999999999999999984
Q ss_pred -------------------------CCCCCCccccCCCCcCEEeccCCcCCCC-----------------CCcccc--CC
Q 038019 101 -------------------------FTGPLPSFIGNLSRLMFLSFSHNDFSGP-----------------VPRELG--NL 136 (866)
Q Consensus 101 -------------------------l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-----------------~p~~l~--~l 136 (866)
+++ +|..|+++++|++|+|++|.+++. +|..++ ++
T Consensus 170 l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l 248 (636)
T 4eco_A 170 PQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNL 248 (636)
T ss_dssp TTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGC
T ss_pred ccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhccc
Confidence 334 788899999999999999999986 999999 99
Q ss_pred CCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCC-CCC-CChhhhhcC------cCCCEEEecCCCCCCCCcc--ccc
Q 038019 137 KELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCG-AGG-EIPSTFAKL------RNMQTLWASDNPFTGKIPD--FIG 206 (866)
Q Consensus 137 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~l~ 206 (866)
++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..++++ ++|++|+|++|+++ .+|. .++
T Consensus 249 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~ 327 (636)
T 4eco_A 249 KDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQ 327 (636)
T ss_dssp TTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHT
T ss_pred CCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhc
Confidence 999999999999999999999999999999999998 998 899999887 99999999999999 8888 999
Q ss_pred CCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCC-CCceeccCcccccCCCcccCCCC--Cc
Q 038019 207 NWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKN-LTDLSLRNALITGTIPFGIGELQ--ML 283 (866)
Q Consensus 207 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~p~~~~~l~--~L 283 (866)
++++|++|+|++|.++|.+| .|.++++|+.|++++|.+. ..+..+..+++ |+.|++++|.++ .+|..+..++ +|
T Consensus 328 ~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L 404 (636)
T 4eco_A 328 KMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVM 404 (636)
T ss_dssp TCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCE
T ss_pred cCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCcc
Confidence 99999999999999999999 9999999999999999887 33445788888 999999999999 7888877765 89
Q ss_pred CEEeeecCcCcccCCcccC-------CCCCCcEEECcCCCCcccCCccc---CCCCCEEEeeCCCCCCccCccccc----
Q 038019 284 QILDLSFNNLTGQIPATLF-------NIDSLEYLFLGNNSLSGTLPDQK---SENLQKIDLSHNHLSGTFPLWVNS---- 349 (866)
Q Consensus 284 ~~L~Ls~N~l~~~~p~~l~-------~l~~L~~L~L~~N~l~g~~p~~~---~~~L~~L~Ls~N~l~g~~p~~~~~---- 349 (866)
+.|++++|.+++.+|..+. .+++|++|+|++|+++ .+|... .++|+.|+|++|+++ .+|.....
T Consensus 405 ~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~ 482 (636)
T 4eco_A 405 SAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENE 482 (636)
T ss_dssp EEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTE
T ss_pred CEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccc
Confidence 9999999999999999888 8889999999999999 556532 578999999999999 77765432
Q ss_pred ------ccc-cccccccccc
Q 038019 350 ------ELQ-MNLAVNNFKF 362 (866)
Q Consensus 350 ------~~~-l~l~~N~~~~ 362 (866)
.++ |+|++|.++.
T Consensus 483 ~~~~l~~L~~L~Ls~N~l~~ 502 (636)
T 4eco_A 483 NFKNTYLLTSIDLRFNKLTK 502 (636)
T ss_dssp ECTTGGGCCEEECCSSCCCB
T ss_pred cccccCCccEEECcCCcCCc
Confidence 344 9999999883
No 3
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=9.8e-38 Score=378.37 Aligned_cols=353 Identities=18% Similarity=0.253 Sum_probs=290.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCcCCC-----CC--CCCCCCCCcccCCCCCCCCCCeeccccCCCCCeeeEEEEEEcccC
Q 038019 4 KHAVRALNSILQQWDAPAVPLWNISG-----NP--CSGSALNATDSEFESPNNNPAIVCNCTFDNGATCHITKLRVYGLN 76 (866)
Q Consensus 4 ~~~~~~l~~~~~~~~~~~~~~w~~~~-----~~--C~~~~~~~~~~~~~~~~~~~~v~C~~~~~~~~~~~v~~L~l~~~~ 76 (866)
.+|++||++||++|++| +|+.++ +| | .|....+...-+...||.|++ .++|+.|+|++++
T Consensus 268 ~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C----~W~~~~~~~~w~~~~GV~C~~------~~~V~~L~Ls~~~ 334 (876)
T 4ecn_A 268 IKDYKALKAIWEALDGK---NWRYYSGTINNTIHSL----NWNFNKELDMWGDQPGVDLDN------NGRVTGLSLAGFG 334 (876)
T ss_dssp HHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCC----SCCCSSCGGGTTCCTTEEECT------TSCEEEEECTTTC
T ss_pred hHHHHHHHHHHHHcCCC---CCCcCCCcccccCCcc----ccccccccccccCcCceEecC------CCCEEEEECccCC
Confidence 57999999999999866 697654 66 5 352222211112238999985 2589999999999
Q ss_pred cCCCCCcccCCCCCCCEEEc-cCCCCCCC---------------------------------------------------
Q 038019 77 KKGVIPEELVTLQYLTVLKI-DQNFFTGP--------------------------------------------------- 104 (866)
Q Consensus 77 l~~~~p~~l~~l~~L~~L~L-s~n~l~~~--------------------------------------------------- 104 (866)
+.|.+|++|++|++|++|+| ++|.++|.
T Consensus 335 L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 335 AKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp CEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred CCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 99999999999999999999 77754333
Q ss_pred -------------------------CCccccCCCCcCEEeccCCcCCC-----------------CCCcccc--CCCCCC
Q 038019 105 -------------------------LPSFIGNLSRLMFLSFSHNDFSG-----------------PVPRELG--NLKELT 140 (866)
Q Consensus 105 -------------------------~p~~l~~l~~L~~L~Ls~N~l~~-----------------~~p~~l~--~l~~L~ 140 (866)
+|..|++|++|++|+|++|+|++ .+|..++ ++++|+
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~ 494 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLT 494 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCC
T ss_pred cccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCC
Confidence 78889999999999999999998 3999988 999999
Q ss_pred EeeccCCCCCCCCchhhcCCCCccEEEeecCC-CCC-CChhhhhcCc-------CCCEEEecCCCCCCCCcc--cccCCC
Q 038019 141 VLAFGTNNFSGALPPELGNLAKLEQLYIDSCG-AGG-EIPSTFAKLR-------NMQTLWASDNPFTGKIPD--FIGNWT 209 (866)
Q Consensus 141 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~l~~l~ 209 (866)
+|+|++|++.+.+|..|+++++|+.|+|++|+ +++ .+|..+++++ +|++|+|++|.++ .+|. .+++++
T Consensus 495 ~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~ 573 (876)
T 4ecn_A 495 DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMV 573 (876)
T ss_dssp EEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCT
T ss_pred EEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCC
Confidence 99999999999999999999999999999998 998 8999888777 9999999999999 8888 999999
Q ss_pred CCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCC-CCceeccCcccccCCCcccCCCCC--cCEE
Q 038019 210 KLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKN-LTDLSLRNALITGTIPFGIGELQM--LQIL 286 (866)
Q Consensus 210 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~p~~~~~l~~--L~~L 286 (866)
+|+.|+|++|.++ .+| .|.++++|+.|+|++|.+. ..+..+..+++ |+.|+|++|.++ .+|..+..++. |+.|
T Consensus 574 ~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L 649 (876)
T 4ecn_A 574 KLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSV 649 (876)
T ss_dssp TCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEE
T ss_pred CCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEE
Confidence 9999999999999 788 8999999999999999988 44456888888 999999999999 77888777654 9999
Q ss_pred eeecCcCcccCCcc---cC--CCCCCcEEECcCCCCcccCCccc---CCCCCEEEeeCCCCCCccCccccc---------
Q 038019 287 DLSFNNLTGQIPAT---LF--NIDSLEYLFLGNNSLSGTLPDQK---SENLQKIDLSHNHLSGTFPLWVNS--------- 349 (866)
Q Consensus 287 ~Ls~N~l~~~~p~~---l~--~l~~L~~L~L~~N~l~g~~p~~~---~~~L~~L~Ls~N~l~g~~p~~~~~--------- 349 (866)
+|++|++.+.+|.. +. .+++|+.|+|++|+++ .+|... .++|+.|+|++|+++ .+|.+...
T Consensus 650 ~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl 727 (876)
T 4ecn_A 650 DFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNT 727 (876)
T ss_dssp ECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTG
T ss_pred ECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhcccccccccc
Confidence 99999998876632 22 3458999999999998 566543 478999999999998 67765432
Q ss_pred -ccc-ccccccccccccCCCc--cCCCcccc
Q 038019 350 -ELQ-MNLAVNNFKFDISNIS--VFPGLNCL 376 (866)
Q Consensus 350 -~~~-l~l~~N~~~~~~~~~~--~~p~l~~l 376 (866)
.++ |+|++|+++.-...+. .++.|..+
T Consensus 728 ~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L 758 (876)
T 4ecn_A 728 YLLTTIDLRFNKLTSLSDDFRATTLPYLSNM 758 (876)
T ss_dssp GGCCEEECCSSCCCCCCGGGSTTTCTTCCEE
T ss_pred CCccEEECCCCCCccchHHhhhccCCCcCEE
Confidence 333 8999998873322232 44555443
No 4
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.6e-37 Score=378.60 Aligned_cols=333 Identities=28% Similarity=0.380 Sum_probs=232.5
Q ss_pred CHHHHHHHHHHHHhCCCC-CCCCCcCCCCCCCCCCCCCcccCCCCCCCCCCeeccccCCCCCeeeEEEEEEcccCcCCC-
Q 038019 3 DKHAVRALNSILQQWDAP-AVPLWNISGNPCSGSALNATDSEFESPNNNPAIVCNCTFDNGATCHITKLRVYGLNKKGV- 80 (866)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~-~~~~w~~~~~~C~~~~~~~~~~~~~~~~~~~~v~C~~~~~~~~~~~v~~L~l~~~~l~~~- 80 (866)
.++|++||++||+++.+| .+++|+.+.||| .| .||.|+ . .+|+.|+|+++.+.|.
T Consensus 10 ~~~~~~all~~k~~~~~~~~l~~W~~~~~~C----~w------------~gv~C~-~------~~v~~L~L~~~~l~g~~ 66 (768)
T 3rgz_A 10 LYREIHQLISFKDVLPDKNLLPDWSSNKNPC----TF------------DGVTCR-D------DKVTSIDLSSKPLNVGF 66 (768)
T ss_dssp HHHHHHHHHHHHTTCSCTTSSTTCCTTSCGG----GS------------TTEEEE-T------TEEEEEECTTSCCCEEH
T ss_pred CHHHHHHHHHHHhhCCCcccccCCCCCCCCc----CC------------cceEEC-C------CcEEEEECCCCCcCCcc
Confidence 367999999999999766 578998778999 46 799997 1 4899999999998887
Q ss_pred --CCc-----------------------ccCCCCCCCEEEccCCCCCCCCCc--cccCCCCcCEEeccCCcCCCCCCccc
Q 038019 81 --IPE-----------------------ELVTLQYLTVLKIDQNFFTGPLPS--FIGNLSRLMFLSFSHNDFSGPVPREL 133 (866)
Q Consensus 81 --~p~-----------------------~l~~l~~L~~L~Ls~n~l~~~~p~--~l~~l~~L~~L~Ls~N~l~~~~p~~l 133 (866)
+|+ .|+++++|++|||++|.++|.+|. .++++++|++|+|++|.+++.+|..+
T Consensus 67 ~~l~~~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~ 146 (768)
T 3rgz_A 67 SAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSG 146 (768)
T ss_dssp HHHHHHTTTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCS
T ss_pred CccChhHhccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHH
Confidence 554 455556666666666666655555 56666666666666666665555544
Q ss_pred -cCCCCCCEeeccCCCCCCCCchh---hcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCC
Q 038019 134 -GNLKELTVLAFGTNNFSGALPPE---LGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWT 209 (866)
Q Consensus 134 -~~l~~L~~L~Ls~N~l~~~~p~~---l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 209 (866)
.++++|++|+|++|.+++..|.. +.++++|++|+|++|.+++..|. ..+++|++|+|++|.+++.+|. +++++
T Consensus 147 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~ 223 (768)
T 3rgz_A 147 GLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCS 223 (768)
T ss_dssp CCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCC
T ss_pred hccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCC
Confidence 56666666666666666555555 55666666666666666655443 5667777777777777766665 77777
Q ss_pred CCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCC-CCcCEEee
Q 038019 210 KLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGEL-QMLQILDL 288 (866)
Q Consensus 210 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l-~~L~~L~L 288 (866)
+|++|+|++|.+++.+|..|.++++|+.|++++|.+....+.. .+++|++|+|++|.+++.+|..+... ++|+.|+|
T Consensus 224 ~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~L 301 (768)
T 3rgz_A 224 ALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDL 301 (768)
T ss_dssp SCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEEC
T ss_pred CCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEEC
Confidence 7777777777777777777777777777777777664322222 66777777777777777777766654 77777777
Q ss_pred ecCcCcccCCcccCCCCCCcEEECcCCCCcccCCcc---cCCCCCEEEeeCCCCCCccCccccc---ccc-ccccccccc
Q 038019 289 SFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQ---KSENLQKIDLSHNHLSGTFPLWVNS---ELQ-MNLAVNNFK 361 (866)
Q Consensus 289 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---~~~~L~~L~Ls~N~l~g~~p~~~~~---~~~-l~l~~N~~~ 361 (866)
++|.+++.+|..+..+++|++|+|++|+++|.+|.. ..++|+.|++++|++++.+|..+.. .++ |++++|.+.
T Consensus 302 s~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~ 381 (768)
T 3rgz_A 302 SGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFS 381 (768)
T ss_dssp CSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEE
T ss_pred cCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcC
Confidence 777777777777777777777777777777777643 2467777777777777777766542 233 777777776
Q ss_pred cc
Q 038019 362 FD 363 (866)
Q Consensus 362 ~~ 363 (866)
+.
T Consensus 382 ~~ 383 (768)
T 3rgz_A 382 GP 383 (768)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 5
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.5e-36 Score=368.10 Aligned_cols=303 Identities=31% Similarity=0.468 Sum_probs=242.9
Q ss_pred eEEEEEEcccCcCCCCCcc-cCCCCCCCEEEccCCCCCCCCCccc-------------------------cC--CCCcCE
Q 038019 66 HITKLRVYGLNKKGVIPEE-LVTLQYLTVLKIDQNFFTGPLPSFI-------------------------GN--LSRLMF 117 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~p~~-l~~l~~L~~L~Ls~n~l~~~~p~~l-------------------------~~--l~~L~~ 117 (866)
+++.|++++|.++|.+|.. |.++++|++|+|++|.+++.+|..+ .. +++|++
T Consensus 319 ~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~ 398 (768)
T 3rgz_A 319 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 398 (768)
T ss_dssp TCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCE
T ss_pred CccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccE
Confidence 4555666666555555544 5555555555555555554444433 33 556777
Q ss_pred EeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCC
Q 038019 118 LSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPF 197 (866)
Q Consensus 118 L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 197 (866)
|+|++|.+++.+|..|+++++|++|+|++|.+++.+|..++.+++|+.|+|++|.+++.+|..+..+++|++|++++|++
T Consensus 399 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 478 (768)
T 3rgz_A 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 478 (768)
T ss_dssp EECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred EECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcc
Confidence 77777777777888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcc-
Q 038019 198 TGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFG- 276 (866)
Q Consensus 198 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~- 276 (866)
++.+|..+.++++|++|+|++|++++.+|..++.+++|+.|++++|.+....+..+..+++|+.|+|++|.++|.+|..
T Consensus 479 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~ 558 (768)
T 3rgz_A 479 TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGG
T ss_pred cCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHH
Confidence 8888888888888888888888888888888888888888888888887667777888888888888888888766643
Q ss_pred ---------------------------------------------------------------------cCCCCCcCEEe
Q 038019 277 ---------------------------------------------------------------------IGELQMLQILD 287 (866)
Q Consensus 277 ---------------------------------------------------------------------~~~l~~L~~L~ 287 (866)
++.+++|+.|+
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~Ld 638 (768)
T 3rgz_A 559 FKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638 (768)
T ss_dssp GTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEE
T ss_pred hcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEE
Confidence 33457789999
Q ss_pred eecCcCcccCCcccCCCCCCcEEECcCCCCcccCCccc--CCCCCEEEeeCCCCCCccCcccccc--c-ccccccccccc
Q 038019 288 LSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQK--SENLQKIDLSHNHLSGTFPLWVNSE--L-QMNLAVNNFKF 362 (866)
Q Consensus 288 Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~--~~~L~~L~Ls~N~l~g~~p~~~~~~--~-~l~l~~N~~~~ 362 (866)
|++|+++|.+|..++.+++|+.|+|++|+++|.+|... .++|+.|||++|+++|.+|..+... + .|++++|+++|
T Consensus 639 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 718 (768)
T 3rgz_A 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718 (768)
T ss_dssp CCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEE
T ss_pred CcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccc
Confidence 99999999999999999999999999999999999865 4799999999999999999887643 3 38999999998
Q ss_pred ccCCCc
Q 038019 363 DISNIS 368 (866)
Q Consensus 363 ~~~~~~ 368 (866)
.++...
T Consensus 719 ~iP~~~ 724 (768)
T 3rgz_A 719 PIPEMG 724 (768)
T ss_dssp ECCSSS
T ss_pred cCCCch
Confidence 866543
No 6
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.3e-34 Score=328.48 Aligned_cols=299 Identities=21% Similarity=0.219 Sum_probs=211.9
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCC-CccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPL-PSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
.++++|++++|.+++..|..|.++++|++|+|++|.+.+.+ +..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 57999999999999999999999999999999999997555 56799999999999999999988899999999999999
Q ss_pred ccCCCCCCCCchh--hcCCCCccEEEeecCCCCCCChhh-hhcCcCCCEEEecCCCCCCCCcccccCC------------
Q 038019 144 FGTNNFSGALPPE--LGNLAKLEQLYIDSCGAGGEIPST-FAKLRNMQTLWASDNPFTGKIPDFIGNW------------ 208 (866)
Q Consensus 144 Ls~N~l~~~~p~~--l~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l------------ 208 (866)
|++|.+++..+.. ++.+++|++|+|++|.+++..|.. |.++++|++|++++|.+++..+..+..+
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999866655 999999999999999999988876 8999999999999999998888776554
Q ss_pred ----------------------CCCCeEEccCCCCCCCCchhhcCC----------------------------------
Q 038019 209 ----------------------TKLKSLRFQGNSFQGPIPSSLSKL---------------------------------- 232 (866)
Q Consensus 209 ----------------------~~L~~L~L~~N~l~~~~p~~~~~l---------------------------------- 232 (866)
++|++|+|++|.+.+..|..+..+
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 456666666666665444433221
Q ss_pred -----CCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCC
Q 038019 233 -----ASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSL 307 (866)
Q Consensus 233 -----~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 307 (866)
++|+.|++++|.+.......+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..+..+..+++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 345555555544444444445555555555555555555555555555555555555555555555555555555
Q ss_pred cEEECcCCCCcccCCccc--CCCCCEEEeeCCCCCCccCccccc--cc-cccccccccccc
Q 038019 308 EYLFLGNNSLSGTLPDQK--SENLQKIDLSHNHLSGTFPLWVNS--EL-QMNLAVNNFKFD 363 (866)
Q Consensus 308 ~~L~L~~N~l~g~~p~~~--~~~L~~L~Ls~N~l~g~~p~~~~~--~~-~l~l~~N~~~~~ 363 (866)
++|+|++|++++..|... .++|+.|+|++|++++..+..+.. .+ .|++++|++.++
T Consensus 350 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 350 EVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 555555555555444322 245555555555555433333221 12 255555555554
No 7
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-33 Score=323.24 Aligned_cols=315 Identities=20% Similarity=0.190 Sum_probs=277.5
Q ss_pred CCeeccccC----CCCCeeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCC
Q 038019 51 PAIVCNCTF----DNGATCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFS 126 (866)
Q Consensus 51 ~~v~C~~~~----~~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 126 (866)
..+.|.... +.....+++.|++++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++
T Consensus 14 ~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 93 (477)
T 2id5_A 14 RAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK 93 (477)
T ss_dssp TEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC
Confidence 456664321 1223457899999999999999999999999999999999999988999999999999999999999
Q ss_pred CCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCccccc
Q 038019 127 GPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIG 206 (866)
Q Consensus 127 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 206 (866)
+..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..+.
T Consensus 94 ~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~ 173 (477)
T 2id5_A 94 LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALS 173 (477)
T ss_dssp SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHT
T ss_pred ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhc
Confidence 77777899999999999999999999999999999999999999999999999999999999999999999988778899
Q ss_pred CCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEE
Q 038019 207 NWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQIL 286 (866)
Q Consensus 207 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 286 (866)
++++|+.|+|++|.+.+..+..|..+++|+.|++++|..............+|+.|+|++|.++...+..+..+++|+.|
T Consensus 174 ~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 253 (477)
T 2id5_A 174 HLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFL 253 (477)
T ss_dssp TCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEE
T ss_pred ccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCee
Confidence 99999999999999998888899999999999999987664444444455699999999999996665689999999999
Q ss_pred eeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCccc--CCCCCEEEeeCCCCCCccCccccc--cc-cccccccccc
Q 038019 287 DLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQK--SENLQKIDLSHNHLSGTFPLWVNS--EL-QMNLAVNNFK 361 (866)
Q Consensus 287 ~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~--~~~L~~L~Ls~N~l~g~~p~~~~~--~~-~l~l~~N~~~ 361 (866)
+|++|.+++..+..+..+++|+.|+|++|++++..|..+ .++|+.|+|++|++++..+..+.. .+ .|++++|++.
T Consensus 254 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 254 NLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp ECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred ECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 999999998888899999999999999999998777654 479999999999999876665542 33 4999999998
Q ss_pred cccC
Q 038019 362 FDIS 365 (866)
Q Consensus 362 ~~~~ 365 (866)
++..
T Consensus 334 c~c~ 337 (477)
T 2id5_A 334 CDCR 337 (477)
T ss_dssp CSGG
T ss_pred Cccc
Confidence 8753
No 8
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.98 E-value=5.4e-33 Score=331.06 Aligned_cols=293 Identities=19% Similarity=0.215 Sum_probs=253.9
Q ss_pred CcCCCCCcccCCCCCCCEEEccCCCCCCC-----------------CCcccc--CCCCcCEEeccCCcCCCCCCccccCC
Q 038019 76 NKKGVIPEELVTLQYLTVLKIDQNFFTGP-----------------LPSFIG--NLSRLMFLSFSHNDFSGPVPRELGNL 136 (866)
Q Consensus 76 ~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~-----------------~p~~l~--~l~~L~~L~Ls~N~l~~~~p~~l~~l 136 (866)
+++| +|..|+++++|++|+|++|.+++. +|..++ ++++|++|+|++|++.+.+|..|+++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 3445 889999999999999999999986 999999 99999999999999999999999999
Q ss_pred CCCCEeeccCCC-CCC-CCchhhcCC------CCccEEEeecCCCCCCChh--hhhcCcCCCEEEecCCCCCCCCccccc
Q 038019 137 KELTVLAFGTNN-FSG-ALPPELGNL------AKLEQLYIDSCGAGGEIPS--TFAKLRNMQTLWASDNPFTGKIPDFIG 206 (866)
Q Consensus 137 ~~L~~L~Ls~N~-l~~-~~p~~l~~l------~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~l~ 206 (866)
++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .|+++++|++|++++|+++|.+| .++
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~ 350 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG 350 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhC
Confidence 999999999998 998 899999887 99999999999999 7888 99999999999999999999999 899
Q ss_pred CCCCCCeEEccCCCCCCCCchhhcCCCC-CCEEEccCccCCCCCchhhhc--CCCCCceeccCcccccCCCcccC-----
Q 038019 207 NWTKLKSLRFQGNSFQGPIPSSLSKLAS-LESLQMSDIYNVSSSLDFVMS--LKNLTDLSLRNALITGTIPFGIG----- 278 (866)
Q Consensus 207 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~l~~n~~~~~~~~~~~~--l~~L~~L~L~~n~l~~~~p~~~~----- 278 (866)
++++|++|+|++|.++ .+|..+.++++ |+.|++++|.+... +..+.. +++|+.|++++|.+++.+|..+.
T Consensus 351 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~l-p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~ 428 (636)
T 4eco_A 351 SEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYI-PNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPT 428 (636)
T ss_dssp EEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSC-CSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSS
T ss_pred CCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCccc-chhhhhcccCccCEEECcCCcCCCcchhhhcccccc
Confidence 9999999999999999 88889999999 99999999998833 344444 44899999999999999998888
Q ss_pred --CCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCcccCC----------CCCEEEeeCCCCCCccCcc
Q 038019 279 --ELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQKSE----------NLQKIDLSHNHLSGTFPLW 346 (866)
Q Consensus 279 --~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~----------~L~~L~Ls~N~l~g~~p~~ 346 (866)
.+++|+.|+|++|.++...+..+..+++|++|+|++|+++ .+|...+. +|+.|+|++|+++ .+|..
T Consensus 429 ~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~ 506 (636)
T 4eco_A 429 PFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDD 506 (636)
T ss_dssp CCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGG
T ss_pred cccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChh
Confidence 8889999999999999544444556999999999999999 67765442 8999999999999 68876
Q ss_pred cc--c--cc-cccccccccccccCCCccCCCccc
Q 038019 347 VN--S--EL-QMNLAVNNFKFDISNISVFPGLNC 375 (866)
Q Consensus 347 ~~--~--~~-~l~l~~N~~~~~~~~~~~~p~l~~ 375 (866)
+. . .+ .|+|++|++++-...+..++.|..
T Consensus 507 ~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~ 540 (636)
T 4eco_A 507 FRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKG 540 (636)
T ss_dssp GSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCE
T ss_pred hhhccCCCcCEEECCCCCCCCcChhhhcCCCCCE
Confidence 54 2 23 499999999863333333444433
No 9
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.98 E-value=4.3e-32 Score=310.91 Aligned_cols=282 Identities=21% Similarity=0.233 Sum_probs=251.3
Q ss_pred eeeEEEEEEcccCcCCCC-CcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCcc--ccCCCCCC
Q 038019 64 TCHITKLRVYGLNKKGVI-PEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRE--LGNLKELT 140 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~-p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--l~~l~~L~ 140 (866)
..+++.|++++|.+.+.+ +..|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++.+|.. |.++++|+
T Consensus 53 l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~ 132 (455)
T 3v47_A 53 LQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLE 132 (455)
T ss_dssp CTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCC
T ss_pred CccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCC
Confidence 458999999999998776 567999999999999999999888999999999999999999999866555 99999999
Q ss_pred EeeccCCCCCCCCchh-hcCCCCccEEEeecCCCCCCChhhhhcC----------------------------------c
Q 038019 141 VLAFGTNNFSGALPPE-LGNLAKLEQLYIDSCGAGGEIPSTFAKL----------------------------------R 185 (866)
Q Consensus 141 ~L~Ls~N~l~~~~p~~-l~~l~~L~~L~L~~n~l~~~~p~~~~~l----------------------------------~ 185 (866)
+|+|++|.+++..|.. +.++++|++|+|++|.+++..+..+..+ +
T Consensus 133 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~ 212 (455)
T 3v47_A 133 MLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNT 212 (455)
T ss_dssp EEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTC
T ss_pred EEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccc
Confidence 9999999999888876 8999999999999999998888776654 6
Q ss_pred CCCEEEecCCCCCCCCcccccC---------------------------------------CCCCCeEEccCCCCCCCCc
Q 038019 186 NMQTLWASDNPFTGKIPDFIGN---------------------------------------WTKLKSLRFQGNSFQGPIP 226 (866)
Q Consensus 186 ~L~~L~L~~N~l~~~~p~~l~~---------------------------------------l~~L~~L~L~~N~l~~~~p 226 (866)
+|++|++++|.+++.+|..+.. .++|+.|++++|.+.+.+|
T Consensus 213 ~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 292 (455)
T 3v47_A 213 SITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLK 292 (455)
T ss_dssp EEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECT
T ss_pred eeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccch
Confidence 7999999999887655544322 2589999999999999999
Q ss_pred hhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCC
Q 038019 227 SSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDS 306 (866)
Q Consensus 227 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 306 (866)
..|.++++|+.|++++|.+.......+..+++|+.|+|++|.+++..+..+..+++|+.|+|++|++++..|..+..+++
T Consensus 293 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 372 (455)
T 3v47_A 293 SVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPN 372 (455)
T ss_dssp TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred hhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccccc
Confidence 99999999999999999998877788999999999999999999888999999999999999999999999999999999
Q ss_pred CcEEECcCCCCcccCCcc--cCCCCCEEEeeCCCCCCccCc
Q 038019 307 LEYLFLGNNSLSGTLPDQ--KSENLQKIDLSHNHLSGTFPL 345 (866)
Q Consensus 307 L~~L~L~~N~l~g~~p~~--~~~~L~~L~Ls~N~l~g~~p~ 345 (866)
|++|+|++|++++..+.. ..++|+.|+|++|++++..|.
T Consensus 373 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 373 LKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 999999999999755533 357999999999999999884
No 10
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=5.4e-31 Score=313.13 Aligned_cols=298 Identities=20% Similarity=0.187 Sum_probs=269.7
Q ss_pred eEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeecc
Q 038019 66 HITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFG 145 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 145 (866)
+++.|++.+|.+++..+..|.++++|++|+|++|.++ .+|..+.++++|++|+|++|.+++..|..+.++++|++|+++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 333 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK 333 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC
Confidence 7999999999999988888999999999999999998 788899999999999999999998888999999999999999
Q ss_pred CCCCCCCCch-hhcCCCCccEEEeecCCCCCCC--hhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCC
Q 038019 146 TNNFSGALPP-ELGNLAKLEQLYIDSCGAGGEI--PSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQ 222 (866)
Q Consensus 146 ~N~l~~~~p~-~l~~l~~L~~L~L~~n~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 222 (866)
+|.+.+.+|. .+..+++|++|++++|.+++.. +..+..+++|++|++++|.+++..|..+..+++|+.|++++|.+.
T Consensus 334 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 413 (606)
T 3t6q_A 334 GNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK 413 (606)
T ss_dssp SCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE
T ss_pred CCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC
Confidence 9999877765 4999999999999999998876 788999999999999999999888999999999999999999999
Q ss_pred CCCch-hhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccC---CCcccCCCCCcCEEeeecCcCcccCC
Q 038019 223 GPIPS-SLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGT---IPFGIGELQMLQILDLSFNNLTGQIP 298 (866)
Q Consensus 223 ~~~p~-~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p 298 (866)
+..+. .+.++++|+.|++++|.+.......+..+++|++|+|++|.+++. .+..+..+++|+.|++++|.+++..|
T Consensus 414 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 493 (606)
T 3t6q_A 414 VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQ 493 (606)
T ss_dssp CCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECT
T ss_pred CcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccCh
Confidence 87654 489999999999999999887778889999999999999999873 33568999999999999999999999
Q ss_pred cccCCCCCCcEEECcCCCCcccCCccc--CCCCCEEEeeCCCCCCccCccccc--cc-cccccccccccccC
Q 038019 299 ATLFNIDSLEYLFLGNNSLSGTLPDQK--SENLQKIDLSHNHLSGTFPLWVNS--EL-QMNLAVNNFKFDIS 365 (866)
Q Consensus 299 ~~l~~l~~L~~L~L~~N~l~g~~p~~~--~~~L~~L~Ls~N~l~g~~p~~~~~--~~-~l~l~~N~~~~~~~ 365 (866)
..+..+++|++|+|++|++++..|... .+.| .|+|++|++++..|..+.. .+ .+++++|++.|++.
T Consensus 494 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 494 HAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp TTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred hhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 999999999999999999998877654 3688 9999999999888876553 23 49999999988743
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=5.5e-31 Score=313.09 Aligned_cols=298 Identities=19% Similarity=0.155 Sum_probs=193.2
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 45666666666666666666666666666666666666655666666666666666666666655666666666666666
Q ss_pred cCCCCCCCCchhhcCCCCccEEEeecCCCCC-CChhhhhcCcCCCEEEecCCCCCCCCccc-------------------
Q 038019 145 GTNNFSGALPPELGNLAKLEQLYIDSCGAGG-EIPSTFAKLRNMQTLWASDNPFTGKIPDF------------------- 204 (866)
Q Consensus 145 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~------------------- 204 (866)
++|.+++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..+..
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 6666665555556666666666666666654 34556666666666666555544322211
Q ss_pred --------------------------------------------------------------------------------
Q 038019 205 -------------------------------------------------------------------------------- 204 (866)
Q Consensus 205 -------------------------------------------------------------------------------- 204 (866)
T Consensus 192 ~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 271 (606)
T 3vq2_A 192 PIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYT 271 (606)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCC
T ss_pred CcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecccc
Confidence
Q ss_pred --------------------------------------------------------------------------ccCCCC
Q 038019 205 --------------------------------------------------------------------------IGNWTK 210 (866)
Q Consensus 205 --------------------------------------------------------------------------l~~l~~ 210 (866)
+..+++
T Consensus 272 ~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~ 351 (606)
T 3vq2_A 272 NDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPS 351 (606)
T ss_dssp TTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTT
T ss_pred ccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCC
Confidence 112344
Q ss_pred CCeEEccCCCCCCC--CchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCC-cccCCCCCcCEEe
Q 038019 211 LKSLRFQGNSFQGP--IPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIP-FGIGELQMLQILD 287 (866)
Q Consensus 211 L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~ 287 (866)
|++|++++|.+++. ++..+..+++|+.|++++|.+.... ..+..+++|+.|++++|.+.+..+ ..+..+++|+.|+
T Consensus 352 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 430 (606)
T 3vq2_A 352 LSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMS-ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLD 430 (606)
T ss_dssp CCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEEC-CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEE
T ss_pred CCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccch-hhccCCCCCCeeECCCCccCCccChhhhhccccCCEEE
Confidence 55555555555543 3667778888888888888765433 556677778888888888777766 5677777788888
Q ss_pred eecCcCcccCCcccCCCCCCcEEECcCCCCccc-CCccc--CCCCCEEEeeCCCCCCccCccccc--cc-cccccccccc
Q 038019 288 LSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGT-LPDQK--SENLQKIDLSHNHLSGTFPLWVNS--EL-QMNLAVNNFK 361 (866)
Q Consensus 288 Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~-~p~~~--~~~L~~L~Ls~N~l~g~~p~~~~~--~~-~l~l~~N~~~ 361 (866)
+++|.+++..|..+..+++|++|++++|++++. +|... .++|+.|+|++|++++..|.++.. .+ .|++++|+++
T Consensus 431 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 510 (606)
T 3vq2_A 431 ISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLL 510 (606)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCC
Confidence 888877777777777777777777777777763 44432 367777777777777776665542 22 3777777776
Q ss_pred cc
Q 038019 362 FD 363 (866)
Q Consensus 362 ~~ 363 (866)
+.
T Consensus 511 ~~ 512 (606)
T 3vq2_A 511 FL 512 (606)
T ss_dssp CE
T ss_pred Cc
Confidence 54
No 12
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=4.3e-31 Score=307.98 Aligned_cols=304 Identities=19% Similarity=0.200 Sum_probs=238.2
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 47899999999999888889999999999999999999888899999999999999999998 56666 8999999999
Q ss_pred cCCCCCC-CCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCC--CEEEecCCCC--CCCCcccccCCC----------
Q 038019 145 GTNNFSG-ALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNM--QTLWASDNPF--TGKIPDFIGNWT---------- 209 (866)
Q Consensus 145 s~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~l~~l~---------- 209 (866)
++|.+++ .+|..|+++++|++|+|++|.+++ ..+..+++| ++|++++|.+ ++..|..+..+.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 9999987 478899999999999999999876 456777777 9999998888 666666655533
Q ss_pred -------------------------------------------------------------------------CCCeEEc
Q 038019 210 -------------------------------------------------------------------------KLKSLRF 216 (866)
Q Consensus 210 -------------------------------------------------------------------------~L~~L~L 216 (866)
+|++|++
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l 254 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSI 254 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEE
T ss_pred CcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEe
Confidence 6777777
Q ss_pred cCCCCCCCCchhh-----cCCCCCCEEEccCccCCCCCch-------------------------hhhcCCCCCceeccC
Q 038019 217 QGNSFQGPIPSSL-----SKLASLESLQMSDIYNVSSSLD-------------------------FVMSLKNLTDLSLRN 266 (866)
Q Consensus 217 ~~N~l~~~~p~~~-----~~l~~L~~L~l~~n~~~~~~~~-------------------------~~~~l~~L~~L~L~~ 266 (866)
++|.+.|.+|..+ .++++|+.++++.|.+ ..... ....+++|++|++++
T Consensus 255 ~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~ 333 (520)
T 2z7x_B 255 SNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSN 333 (520)
T ss_dssp EEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCS
T ss_pred ecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeEC
Confidence 7777777777776 6666666665555544 11100 115678889999999
Q ss_pred cccccCCCcccCCCCCcCEEeeecCcCcc--cCCcccCCCCCCcEEECcCCCCcccCCcc---cCCCCCEEEeeCCCCCC
Q 038019 267 ALITGTIPFGIGELQMLQILDLSFNNLTG--QIPATLFNIDSLEYLFLGNNSLSGTLPDQ---KSENLQKIDLSHNHLSG 341 (866)
Q Consensus 267 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---~~~~L~~L~Ls~N~l~g 341 (866)
|.+++.+|..++.+++|+.|++++|++++ .+|..+..+++|++|+|++|++++.+|.. ..++|+.|++++|++++
T Consensus 334 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~ 413 (520)
T 2z7x_B 334 NLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTD 413 (520)
T ss_dssp SCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCG
T ss_pred CccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCc
Confidence 99988888888888999999999999886 56677888889999999999988766643 23688888999988888
Q ss_pred ccCcccccccc-ccccccccccccCCCccCCCccc
Q 038019 342 TFPLWVNSELQ-MNLAVNNFKFDISNISVFPGLNC 375 (866)
Q Consensus 342 ~~p~~~~~~~~-l~l~~N~~~~~~~~~~~~p~l~~ 375 (866)
.+|..+...++ |++++|.++.-...+..++.|..
T Consensus 414 ~~~~~l~~~L~~L~Ls~N~l~~ip~~~~~l~~L~~ 448 (520)
T 2z7x_B 414 TIFRCLPPRIKVLDLHSNKIKSIPKQVVKLEALQE 448 (520)
T ss_dssp GGGGSCCTTCCEEECCSSCCCCCCGGGGGCTTCCE
T ss_pred chhhhhcccCCEEECCCCcccccchhhhcCCCCCE
Confidence 88877754444 88888888732222333444443
No 13
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=7.2e-31 Score=302.63 Aligned_cols=281 Identities=20% Similarity=0.137 Sum_probs=261.2
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
..+++.|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 55 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 45899999999999999999999999999999999999977777899999999999999999999999999999999999
Q ss_pred ccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCC
Q 038019 144 FGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQG 223 (866)
Q Consensus 144 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 223 (866)
|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|+.|+|++|.+++..+..|..+++|+.|++++|.+.+
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~ 214 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLD 214 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCC
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcccc
Confidence 99999999889999999999999999999999888999999999999999999998888899999999999999999888
Q ss_pred CCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCC
Q 038019 224 PIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFN 303 (866)
Q Consensus 224 ~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 303 (866)
.++..+....+|+.|++++|.+.......+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..+..
T Consensus 215 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 294 (477)
T 2id5_A 215 TMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRG 294 (477)
T ss_dssp EECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTT
T ss_pred ccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcC
Confidence 88887777789999999999998877778999999999999999999888888999999999999999999999999999
Q ss_pred CCCCcEEECcCCCCcccCCccc--CCCCCEEEeeCCCCCCccC
Q 038019 304 IDSLEYLFLGNNSLSGTLPDQK--SENLQKIDLSHNHLSGTFP 344 (866)
Q Consensus 304 l~~L~~L~L~~N~l~g~~p~~~--~~~L~~L~Ls~N~l~g~~p 344 (866)
+++|++|+|++|++++..+..+ .++|+.|+|++|++++..+
T Consensus 295 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 295 LNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp CTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred cccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccc
Confidence 9999999999999997555432 4789999999999987654
No 14
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=2.7e-32 Score=296.17 Aligned_cols=248 Identities=25% Similarity=0.381 Sum_probs=202.4
Q ss_pred CCCCEEEccCCCCCC--CCCccccCCCCcCEEeccC-CcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccE
Q 038019 89 QYLTVLKIDQNFFTG--PLPSFIGNLSRLMFLSFSH-NDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQ 165 (866)
Q Consensus 89 ~~L~~L~Ls~n~l~~--~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 165 (866)
.+++.|+|++|.+++ .+|..|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 478999999999998 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCC-CCCeEEccCCCCCCCCchhhcCCCCCCEEEccCcc
Q 038019 166 LYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWT-KLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIY 244 (866)
Q Consensus 166 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~ 244 (866)
|+|++|.+++.+|..|..+++|++|+|++|++++.+|..+..++ +|++|+|++|.+++.+|..+..++ |+.|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999999999999999999999999999989999999998 999999999999988888888876 7777777776
Q ss_pred CCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCcc
Q 038019 245 NVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQ 324 (866)
Q Consensus 245 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~ 324 (866)
+.......+..+++|+.|+|++|.+++.+|. +..+++|+.|+|++|++++.+|..+..+++|++|+|++|+++|.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 6655555666667777777777776655554 566666777777777776666666666666666666666666666553
Q ss_pred c-CCCCCEEEeeCCC
Q 038019 325 K-SENLQKIDLSHNH 338 (866)
Q Consensus 325 ~-~~~L~~L~Ls~N~ 338 (866)
. .++|+.|++++|+
T Consensus 288 ~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 288 GNLQRFDVSAYANNK 302 (313)
T ss_dssp TTGGGSCGGGTCSSS
T ss_pred ccccccChHHhcCCC
Confidence 1 2445555555554
No 15
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=8.8e-31 Score=310.12 Aligned_cols=283 Identities=20% Similarity=0.143 Sum_probs=203.5
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++.++.+....+..|..+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 56788999999888777777889999999999999999888889999999999999999999988889999999999999
Q ss_pred cCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCC
Q 038019 145 GTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGP 224 (866)
Q Consensus 145 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 224 (866)
++|.+++..+..|+++++|++|+|++|.+++..|..|..+++|++|+|++|.+++.. +..+++|+.|++++|.+.+
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~- 206 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST- 206 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE-
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc-
Confidence 999999776667899999999999999999999999999999999999999998653 4556788888888887764
Q ss_pred CchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCC
Q 038019 225 IPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNI 304 (866)
Q Consensus 225 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 304 (866)
+....+|+.|++++|.+...... ..++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..|..+..+
T Consensus 207 ----l~~~~~L~~L~ls~n~l~~~~~~---~~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 277 (597)
T 3oja_B 207 ----LAIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKM 277 (597)
T ss_dssp ----EECCTTCSEEECCSSCCCEEECS---CCSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTC
T ss_pred ----ccCCchhheeeccCCcccccccc---cCCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCc
Confidence 23344566666666655422211 124555666666655542 345555566666666666655555555556
Q ss_pred CCCcEEECcCCCCcccCCcc-cCCCCCEEEeeCCCCCCccCccccc--cc-cccccccccc
Q 038019 305 DSLEYLFLGNNSLSGTLPDQ-KSENLQKIDLSHNHLSGTFPLWVNS--EL-QMNLAVNNFK 361 (866)
Q Consensus 305 ~~L~~L~L~~N~l~g~~p~~-~~~~L~~L~Ls~N~l~g~~p~~~~~--~~-~l~l~~N~~~ 361 (866)
++|+.|+|++|.+++..+.. .+++|+.|+|++|+++ .+|.++.. .+ .|+|++|.+.
T Consensus 278 ~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~ 337 (597)
T 3oja_B 278 QRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV 337 (597)
T ss_dssp SSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC
T ss_pred cCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCC
Confidence 66666666666555432111 1345566666666555 33433321 12 2555555554
No 16
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.97 E-value=5.7e-31 Score=309.09 Aligned_cols=297 Identities=20% Similarity=0.208 Sum_probs=219.0
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 57899999999999888888999999999999999999888888999999999999999999877777999999999999
Q ss_pred cCCCCCC-CCchhhcCCCCccEEEeecCCCCCCC-hhhhhcCcCCCEEEecCCCCCCCCcccccC---------------
Q 038019 145 GTNNFSG-ALPPELGNLAKLEQLYIDSCGAGGEI-PSTFAKLRNMQTLWASDNPFTGKIPDFIGN--------------- 207 (866)
Q Consensus 145 s~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~--------------- 207 (866)
++|.+++ ..|..++++++|++|+|++|.+.+.+ +..|.++++|++|++++|.+++.+|..++.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 9999886 35678888999999999988854444 467888888999999888888777766654
Q ss_pred ---------CCCCCeEEccCCCCCCCC--chh-----------------------------hcC----------------
Q 038019 208 ---------WTKLKSLRFQGNSFQGPI--PSS-----------------------------LSK---------------- 231 (866)
Q Consensus 208 ---------l~~L~~L~L~~N~l~~~~--p~~-----------------------------~~~---------------- 231 (866)
+++|++|++++|++++.. +.. +..
T Consensus 186 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~ 265 (549)
T 2z81_A 186 FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNG 265 (549)
T ss_dssp THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEEC
T ss_pred ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccc
Confidence 455666666666665421 000 000
Q ss_pred -------------------------------------------CCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcc
Q 038019 232 -------------------------------------------LASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNAL 268 (866)
Q Consensus 232 -------------------------------------------l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~ 268 (866)
+.+|+.|++++|.+...+...+..+++|+.|+|++|.
T Consensus 266 ~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~ 345 (549)
T 2z81_A 266 LGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENL 345 (549)
T ss_dssp CSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSC
T ss_pred cccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCc
Confidence 1223333333333332222333568889999999999
Q ss_pred cccCCC---cccCCCCCcCEEeeecCcCcccCC--cccCCCCCCcEEECcCCCCcccCCccc--CCCCCEEEeeCCCCCC
Q 038019 269 ITGTIP---FGIGELQMLQILDLSFNNLTGQIP--ATLFNIDSLEYLFLGNNSLSGTLPDQK--SENLQKIDLSHNHLSG 341 (866)
Q Consensus 269 l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p--~~l~~l~~L~~L~L~~N~l~g~~p~~~--~~~L~~L~Ls~N~l~g 341 (866)
+++.+| ..++.+++|+.|++++|++++..+ ..+..+++|++|+|++|+++ .+|... .++|+.|++++|+++.
T Consensus 346 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~ 424 (549)
T 2z81_A 346 MVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV 424 (549)
T ss_dssp CCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC
T ss_pred cccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc
Confidence 887664 347788889999999998876432 45778888999999999888 455432 3678888888888874
Q ss_pred ccCccccccc-cccccccccccc
Q 038019 342 TFPLWVNSEL-QMNLAVNNFKFD 363 (866)
Q Consensus 342 ~~p~~~~~~~-~l~l~~N~~~~~ 363 (866)
+|..+...+ .|++++|++++.
T Consensus 425 -l~~~~~~~L~~L~Ls~N~l~~~ 446 (549)
T 2z81_A 425 -VKTCIPQTLEVLDVSNNNLDSF 446 (549)
T ss_dssp -CCTTSCTTCSEEECCSSCCSCC
T ss_pred -ccchhcCCceEEECCCCChhhh
Confidence 333333333 388888887754
No 17
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=5.5e-31 Score=319.31 Aligned_cols=289 Identities=22% Similarity=0.312 Sum_probs=250.1
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCC-CCC-CCCccccCCC-------CcCEEeccCCcCCCCCCc--c
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNF-FTG-PLPSFIGNLS-------RLMFLSFSHNDFSGPVPR--E 132 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~-l~~-~~p~~l~~l~-------~L~~L~Ls~N~l~~~~p~--~ 132 (866)
..+++.|+|++|++.+.+|..|.++++|++|+|++|+ +++ .+|..+++++ +|++|+|++|+++ .+|. .
T Consensus 490 L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~ 568 (876)
T 4ecn_A 490 LKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASAS 568 (876)
T ss_dssp CTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHH
T ss_pred CCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhh
Confidence 4679999999999999999999999999999999998 998 7888776665 9999999999999 8998 9
Q ss_pred ccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcC-CCEEEecCCCCCCCCcccccCCCC-
Q 038019 133 LGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRN-MQTLWASDNPFTGKIPDFIGNWTK- 210 (866)
Q Consensus 133 l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~l~~l~~- 210 (866)
|+++++|++|+|++|.++ .+| .|+.+++|+.|+|++|.++ .+|..+.++++ |++|+|++|.++ .+|..+..++.
T Consensus 569 l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~ 644 (876)
T 4ecn_A 569 LQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVY 644 (876)
T ss_dssp HTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSS
T ss_pred hhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccC
Confidence 999999999999999999 788 9999999999999999999 88989999999 999999999999 78888877654
Q ss_pred -CCeEEccCCCCCCCCchh---hc--CCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCC-----
Q 038019 211 -LKSLRFQGNSFQGPIPSS---LS--KLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGE----- 279 (866)
Q Consensus 211 -L~~L~L~~N~l~~~~p~~---~~--~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~----- 279 (866)
|+.|+|++|.+.+.+|.. +. .+++|+.|+|++|.+.......+..+++|+.|+|++|.++ .+|..+..
T Consensus 645 ~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~ 723 (876)
T 4ecn_A 645 VMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGN 723 (876)
T ss_dssp CEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSC
T ss_pred CCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhcccccc
Confidence 999999999999876532 22 3458999999999988666666778999999999999998 55554333
Q ss_pred ---CCCcCEEeeecCcCcccCCcccC--CCCCCcEEECcCCCCcccCCccc--CCCCCEEEeeC------CCCCCccCcc
Q 038019 280 ---LQMLQILDLSFNNLTGQIPATLF--NIDSLEYLFLGNNSLSGTLPDQK--SENLQKIDLSH------NHLSGTFPLW 346 (866)
Q Consensus 280 ---l~~L~~L~Ls~N~l~~~~p~~l~--~l~~L~~L~L~~N~l~g~~p~~~--~~~L~~L~Ls~------N~l~g~~p~~ 346 (866)
+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|... .++|+.|+|++ |++.+.+|.+
T Consensus 724 l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~ 801 (876)
T 4ecn_A 724 YKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTG 801 (876)
T ss_dssp CTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTT
T ss_pred ccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHH
Confidence 238999999999998 7888887 89999999999999998 66543 47899999976 8888999987
Q ss_pred cccc--c-ccccccccc
Q 038019 347 VNSE--L-QMNLAVNNF 360 (866)
Q Consensus 347 ~~~~--~-~l~l~~N~~ 360 (866)
+... + .|+|++|.+
T Consensus 802 l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 802 ITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp GGGCSSCCEEECCSSCC
T ss_pred HhcCCCCCEEECCCCCC
Confidence 7642 3 389999998
No 18
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=1.1e-30 Score=310.55 Aligned_cols=297 Identities=22% Similarity=0.186 Sum_probs=221.4
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
..+++.|++++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 32 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 35789999999999999999999999999999999999998899999999999999999999998999999999999999
Q ss_pred ccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCC--eEEccCCCC
Q 038019 144 FGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLK--SLRFQGNSF 221 (866)
Q Consensus 144 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~--~L~L~~N~l 221 (866)
|++|.+++..+..++++++|++|+|++|.+++.....+..+++|++|++++|.+++..+..++.+++|+ .|++++|.+
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc
Confidence 999999987788899999999999999999986544555699999999999999988899999999999 899999999
Q ss_pred CCCCchhhcCCC----------------------------------------------------CCCEEEccCccCCCCC
Q 038019 222 QGPIPSSLSKLA----------------------------------------------------SLESLQMSDIYNVSSS 249 (866)
Q Consensus 222 ~~~~p~~~~~l~----------------------------------------------------~L~~L~l~~n~~~~~~ 249 (866)
.+..|..+.. . +|+.|++++|.+....
T Consensus 192 ~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~ 270 (606)
T 3t6q_A 192 AGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNIS 270 (606)
T ss_dssp CEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCC
T ss_pred CccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccC
Confidence 9877766543 3 3444555555444444
Q ss_pred chhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCcc---cC
Q 038019 250 LDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQ---KS 326 (866)
Q Consensus 250 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---~~ 326 (866)
...+..+++|++|++++|.++ .+|..+..+++|+.|++++|.+++..|..+..+++|++|++++|.+.+.+|.. ..
T Consensus 271 ~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l 349 (606)
T 3t6q_A 271 SNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENL 349 (606)
T ss_dssp TTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTC
T ss_pred HHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhcc
Confidence 444555566666666666555 44555555566666666666665555555555666666666666555544432 12
Q ss_pred CCCCEEEeeCCCCCCcc--Cccccc--cc-ccccccccccc
Q 038019 327 ENLQKIDLSHNHLSGTF--PLWVNS--EL-QMNLAVNNFKF 362 (866)
Q Consensus 327 ~~L~~L~Ls~N~l~g~~--p~~~~~--~~-~l~l~~N~~~~ 362 (866)
++|+.|++++|++++.. |..+.. .+ .|++++|.+..
T Consensus 350 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 390 (606)
T 3t6q_A 350 ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLS 390 (606)
T ss_dssp TTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEE
T ss_pred CcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCc
Confidence 45566666666655443 332221 11 25555555543
No 19
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=1.7e-30 Score=291.29 Aligned_cols=289 Identities=17% Similarity=0.114 Sum_probs=194.1
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
..+++.|++.++.++...+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 35789999999988876666688999999999999999988888999999999999999999988888999999999999
Q ss_pred ccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCC
Q 038019 144 FGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQG 223 (866)
Q Consensus 144 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 223 (866)
|++|.++...+..|.++++|++|+|++|.+++..|..|..+++|++|++++|++++. .+..+++|+.|++++|.+++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc
Confidence 999999966555679999999999999999999899999999999999999999864 24556777777777776653
Q ss_pred CCchhhcCCCCCCEEEccCccCCCCC-------------------chhhhcCCCCCceeccCcccccCCCcccCCCCCcC
Q 038019 224 PIPSSLSKLASLESLQMSDIYNVSSS-------------------LDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQ 284 (866)
Q Consensus 224 ~~p~~~~~l~~L~~L~l~~n~~~~~~-------------------~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 284 (866)
. ...++|+.|++++|.+.... ...+..+++|+.|+|++|.+++..|..+..+++|+
T Consensus 201 ~-----~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 275 (390)
T 3o6n_A 201 L-----AIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLE 275 (390)
T ss_dssp E-----ECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCC
T ss_pred c-----CCCCcceEEECCCCeeeeccccccccccEEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhHccccccCC
Confidence 1 22334555555554443221 13344444555555555555444444444555555
Q ss_pred EEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCcc--cCCCCCEEEeeCCCCCCccCcccccccccccccccccc
Q 038019 285 ILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQ--KSENLQKIDLSHNHLSGTFPLWVNSELQMNLAVNNFKF 362 (866)
Q Consensus 285 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~--~~~~L~~L~Ls~N~l~g~~p~~~~~~~~l~l~~N~~~~ 362 (866)
.|+|++|++++ +|..+..+++|++|+|++|++++ +|.. .+++|+.|+|++|+++......+.....|++++|++.+
T Consensus 276 ~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 276 RLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp EEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEH
T ss_pred EEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCccceeCchhhccCCEEEcCCCCccc
Confidence 55555555442 23333444455555555555442 2221 12445555555555443322222222224455554443
No 20
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=1.7e-30 Score=305.70 Aligned_cols=290 Identities=20% Similarity=0.197 Sum_probs=218.4
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57999999999999988899999999999999999999888999999999999999999998 56666 8999999999
Q ss_pred cCCCCCC-CCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCC--CEEEecCCCC--CCCCcccccCCC----------
Q 038019 145 GTNNFSG-ALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNM--QTLWASDNPF--TGKIPDFIGNWT---------- 209 (866)
Q Consensus 145 s~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~l~~l~---------- 209 (866)
++|++++ .+|..|+++++|++|+|++|.+++. .+..+++| ++|++++|.+ ++..|..+..+.
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 205 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHP 205 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecC
Confidence 9999987 3568999999999999999999864 34555555 9999999988 777666665543
Q ss_pred -----------------------------------------------------------------------CCCeEEccC
Q 038019 210 -----------------------------------------------------------------------KLKSLRFQG 218 (866)
Q Consensus 210 -----------------------------------------------------------------------~L~~L~L~~ 218 (866)
+|++|++++
T Consensus 206 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~ 285 (562)
T 3a79_B 206 NSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYN 285 (562)
T ss_dssp SSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEE
T ss_pred ccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEec
Confidence 677777777
Q ss_pred CCCCCCCchhh-----cCCC--------------------------CCCEEEccCccCCCCCchhhhcCCCCCceeccCc
Q 038019 219 NSFQGPIPSSL-----SKLA--------------------------SLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNA 267 (866)
Q Consensus 219 N~l~~~~p~~~-----~~l~--------------------------~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 267 (866)
|.++|.+|..+ .+++ +|+.|++++|.+.... ....+++|++|++++|
T Consensus 286 n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n 363 (562)
T 3a79_B 286 LTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQN 363 (562)
T ss_dssp EEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSS
T ss_pred cEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCC
Confidence 77777777655 2222 2334444433332111 1145677777777777
Q ss_pred ccccCCCcccCCCCCcCEEeeecCcCcc--cCCcccCCCCCCcEEECcCCCCcccCCccc---CCCCCEEEeeCCCCCCc
Q 038019 268 LITGTIPFGIGELQMLQILDLSFNNLTG--QIPATLFNIDSLEYLFLGNNSLSGTLPDQK---SENLQKIDLSHNHLSGT 342 (866)
Q Consensus 268 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~---~~~L~~L~Ls~N~l~g~ 342 (866)
.+++.+|..++.+++|+.|++++|++++ .+|..+..+++|++|+|++|++++.+|... .++|+.|++++|++++.
T Consensus 364 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 443 (562)
T 3a79_B 364 VFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGS 443 (562)
T ss_dssp CCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGG
T ss_pred ccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcc
Confidence 7777777777777777777777777775 334567777777777777777776555432 36777777777777777
Q ss_pred cCccccccc-ccccccccccc
Q 038019 343 FPLWVNSEL-QMNLAVNNFKF 362 (866)
Q Consensus 343 ~p~~~~~~~-~l~l~~N~~~~ 362 (866)
+|..+...+ .|++++|.++.
T Consensus 444 ~~~~l~~~L~~L~L~~N~l~~ 464 (562)
T 3a79_B 444 VFRCLPPKVKVLDLHNNRIMS 464 (562)
T ss_dssp GGSSCCTTCSEEECCSSCCCC
T ss_pred hhhhhcCcCCEEECCCCcCcc
Confidence 776664333 37777777763
No 21
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=2.6e-30 Score=307.29 Aligned_cols=307 Identities=17% Similarity=0.116 Sum_probs=250.1
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
..+++.|++++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+
T Consensus 55 l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 55 FSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE
T ss_pred CccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEe
Confidence 35788899999888888888888899999999999988887788888888999999998888877777888888888888
Q ss_pred ccCCCCCC-CCchhhcCCCCccEEEeecCCCCCCChhhhh----------------------------------------
Q 038019 144 FGTNNFSG-ALPPELGNLAKLEQLYIDSCGAGGEIPSTFA---------------------------------------- 182 (866)
Q Consensus 144 Ls~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~---------------------------------------- 182 (866)
|++|.+++ .+|..++++++|++|+|++|++++..|..|.
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n 214 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGN 214 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCC
Confidence 88888875 5688888888888888888877654443221
Q ss_pred --------------------------------------------------------------------------------
Q 038019 183 -------------------------------------------------------------------------------- 182 (866)
Q Consensus 183 -------------------------------------------------------------------------------- 182 (866)
T Consensus 215 ~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~ 294 (606)
T 3vq2_A 215 FNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAG 294 (606)
T ss_dssp CSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEES
T ss_pred ccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecC
Confidence
Q ss_pred -----------------------------------------------------cCcCCCEEEecCCCCCCC--CcccccC
Q 038019 183 -----------------------------------------------------KLRNMQTLWASDNPFTGK--IPDFIGN 207 (866)
Q Consensus 183 -----------------------------------------------------~l~~L~~L~L~~N~l~~~--~p~~l~~ 207 (866)
.+++|++|++++|.+++. +|..+..
T Consensus 295 ~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~ 374 (606)
T 3vq2_A 295 VSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLG 374 (606)
T ss_dssp CCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHC
T ss_pred ccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhcc
Confidence 123444455555555433 3778889
Q ss_pred CCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCc-hhhhcCCCCCceeccCcccccCCCcccCCCCCcCEE
Q 038019 208 WTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSL-DFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQIL 286 (866)
Q Consensus 208 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 286 (866)
+++|++|++++|.+.+ +|..+..+++|+.|++++|.+..... ..+..+++|+.|++++|.+++..|..+..+++|+.|
T Consensus 375 ~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 453 (606)
T 3vq2_A 375 TNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTL 453 (606)
T ss_dssp CSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEE
Confidence 9999999999999885 56889999999999999998876655 678899999999999999999999999999999999
Q ss_pred eeecCcCcc-cCCcccCCCCCCcEEECcCCCCcccCCccc--CCCCCEEEeeCCCCCCccCccccc--cc-ccccccccc
Q 038019 287 DLSFNNLTG-QIPATLFNIDSLEYLFLGNNSLSGTLPDQK--SENLQKIDLSHNHLSGTFPLWVNS--EL-QMNLAVNNF 360 (866)
Q Consensus 287 ~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~--~~~L~~L~Ls~N~l~g~~p~~~~~--~~-~l~l~~N~~ 360 (866)
++++|.+++ .+|..+..+++|++|+|++|++++..|... .++|+.|+|++|++++.+|..+.. .+ .|++++|++
T Consensus 454 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 533 (606)
T 3vq2_A 454 KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRI 533 (606)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCC
T ss_pred ECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcC
Confidence 999999998 478899999999999999999998877644 479999999999999988887764 23 499999998
Q ss_pred ccccCCCccCC
Q 038019 361 KFDISNISVFP 371 (866)
Q Consensus 361 ~~~~~~~~~~p 371 (866)
+.-...+..+|
T Consensus 534 ~~~p~~~~~l~ 544 (606)
T 3vq2_A 534 ETSKGILQHFP 544 (606)
T ss_dssp CCEESCGGGSC
T ss_pred cccCHhHhhhc
Confidence 75433344444
No 22
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=3.4e-30 Score=300.34 Aligned_cols=287 Identities=21% Similarity=0.196 Sum_probs=226.9
Q ss_pred EEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCC
Q 038019 68 TKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTN 147 (866)
Q Consensus 68 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 147 (866)
+.|++++|+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 47899999999 5787776 89999999999999888889999999999999999999888999999999999999999
Q ss_pred CCCCCCchhhcCCCCccEEEeecCCCCC-CChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCC--CeEEccCCCC--C
Q 038019 148 NFSGALPPELGNLAKLEQLYIDSCGAGG-EIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKL--KSLRFQGNSF--Q 222 (866)
Q Consensus 148 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~l--~ 222 (866)
+++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|++++|.+++ ..+..+++| +.|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 998 56666 89999999999999998 578999999999999999999986 456777888 9999999999 6
Q ss_pred CCCchhhcCC--------------------------CCCCEEEccCcc------------------------------CC
Q 038019 223 GPIPSSLSKL--------------------------ASLESLQMSDIY------------------------------NV 246 (866)
Q Consensus 223 ~~~p~~~~~l--------------------------~~L~~L~l~~n~------------------------------~~ 246 (866)
+..|..+..+ ++|+.|++++|. +.
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~ 233 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETT 233 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccC
Confidence 6666666553 233333333321 11
Q ss_pred CCCchh---hhcCCCCCceeccCcccccCCCccc----------------------------------------------
Q 038019 247 SSSLDF---VMSLKNLTDLSLRNALITGTIPFGI---------------------------------------------- 277 (866)
Q Consensus 247 ~~~~~~---~~~l~~L~~L~L~~n~l~~~~p~~~---------------------------------------------- 277 (866)
...... ....++|+.|++++|.+++.+|..+
T Consensus 234 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~ 313 (520)
T 2z7x_B 234 WNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTR 313 (520)
T ss_dssp HHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSC
T ss_pred HHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCc
Confidence 000000 0012345555555555554444433
Q ss_pred -------CCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcc--cCCc--ccCCCCCEEEeeCCCCCCccCcc
Q 038019 278 -------GELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSG--TLPD--QKSENLQKIDLSHNHLSGTFPLW 346 (866)
Q Consensus 278 -------~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g--~~p~--~~~~~L~~L~Ls~N~l~g~~p~~ 346 (866)
..+++|+.|++++|++++.+|..+..+++|++|+|++|++++ .+|. ...++|+.|++++|++++.+|..
T Consensus 314 l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~ 393 (520)
T 2z7x_B 314 MVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKG 393 (520)
T ss_dssp CCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGC
T ss_pred cccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccc
Confidence 678899999999999999899999999999999999999996 4443 34589999999999999977764
Q ss_pred -cc---ccccccccccccccc
Q 038019 347 -VN---SELQMNLAVNNFKFD 363 (866)
Q Consensus 347 -~~---~~~~l~l~~N~~~~~ 363 (866)
+. ....|++++|.+++.
T Consensus 394 ~~~~l~~L~~L~Ls~N~l~~~ 414 (520)
T 2z7x_B 394 DCSWTKSLLSLNMSSNILTDT 414 (520)
T ss_dssp SCCCCTTCCEEECCSSCCCGG
T ss_pred hhccCccCCEEECcCCCCCcc
Confidence 22 223499999999765
No 23
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=7.2e-30 Score=314.34 Aligned_cols=299 Identities=18% Similarity=0.176 Sum_probs=246.0
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCC-CccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEe
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPL-PSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVL 142 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 142 (866)
..+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|+++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 357899999999999999999999999999999999666555 7889999999999999999999899999999999999
Q ss_pred eccCCCCCCCCchh--hcCCCCccEEEeecCCCCCCCh-hhhhcCcCCCEEEecCCCCCCCCcccccCC--CCCCeEEcc
Q 038019 143 AFGTNNFSGALPPE--LGNLAKLEQLYIDSCGAGGEIP-STFAKLRNMQTLWASDNPFTGKIPDFIGNW--TKLKSLRFQ 217 (866)
Q Consensus 143 ~Ls~N~l~~~~p~~--l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~L~ 217 (866)
+|++|.+++.+|.. ++++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..+..+ ++|+.|+|+
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 99999999877766 9999999999999999988755 679999999999999999999888888877 889999999
Q ss_pred CCCCCCCCchhhcCCCC------CCEEEccCccCCCCCch------------------------------------hhhc
Q 038019 218 GNSFQGPIPSSLSKLAS------LESLQMSDIYNVSSSLD------------------------------------FVMS 255 (866)
Q Consensus 218 ~N~l~~~~p~~~~~l~~------L~~L~l~~n~~~~~~~~------------------------------------~~~~ 255 (866)
.|.+.+..|..+..+.+ |+.|++++|.+...... .+.+
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 99988887777666655 88888888754322111 1111
Q ss_pred --CCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCccc--CCCCCE
Q 038019 256 --LKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQK--SENLQK 331 (866)
Q Consensus 256 --l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~--~~~L~~ 331 (866)
.++|+.|+|++|.+.+..+..|..+++|+.|+|++|.+++..+..|..+++|++|+|++|++++..|... .++|+.
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 2578888888888888778888888888888888888888888888888888888888888887666543 467888
Q ss_pred EEeeCCCCCCccCccccc--cc-ccccccccccc
Q 038019 332 IDLSHNHLSGTFPLWVNS--EL-QMNLAVNNFKF 362 (866)
Q Consensus 332 L~Ls~N~l~g~~p~~~~~--~~-~l~l~~N~~~~ 362 (866)
|++++|++++..+..+.. .+ .|++++|.++.
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 888888887766655432 22 37888887764
No 24
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=1.3e-29 Score=302.64 Aligned_cols=140 Identities=17% Similarity=0.142 Sum_probs=127.8
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
..+++.|+|++|++++..+.+|.++++|++|||++|+|+++.|.+|.+|++|++|+|++|+|++..+..|.++++|++|+
T Consensus 51 p~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 51 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred CcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 35799999999999988888999999999999999999988888999999999999999999987778899999999999
Q ss_pred ccCCCCCCCCchhhcCCCCccEEEeecCCCCC-CChhhhhcCcCCCEEEecCCCCCCCCcc
Q 038019 144 FGTNNFSGALPPELGNLAKLEQLYIDSCGAGG-EIPSTFAKLRNMQTLWASDNPFTGKIPD 203 (866)
Q Consensus 144 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 203 (866)
|++|++++..+..|+++++|++|+|++|.++. ..|..+..+++|++|+|++|++++..+.
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccc
Confidence 99999998877889999999999999999976 4688899999999999999988755443
No 25
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.7e-30 Score=283.70 Aligned_cols=270 Identities=19% Similarity=0.277 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHhCC-CC--CCCCCc----CCCCCCCCCCCCCcccCCCCCCCCCCeeccccC---CCCCeeeEEEEEEc
Q 038019 4 KHAVRALNSILQQWD-AP--AVPLWN----ISGNPCSGSALNATDSEFESPNNNPAIVCNCTF---DNGATCHITKLRVY 73 (866)
Q Consensus 4 ~~~~~~l~~~~~~~~-~~--~~~~w~----~~~~~C~~~~~~~~~~~~~~~~~~~~v~C~~~~---~~~~~~~v~~L~l~ 73 (866)
.+|++||+++|+++. ++ ...+|. ...++|. | .|+.|+... ......+++.|+++
T Consensus 26 ~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~----~------------~g~~~~~~~~~l~~~~~~~l~~L~L~ 89 (328)
T 4fcg_A 26 RPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIET----R------------TGRALKATADLLEDATQPGRVALELR 89 (328)
T ss_dssp CCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCC----S------------HHHHHHHHHHHHHHHTSTTCCEEEEE
T ss_pred chHHHHHHHHHHhccCCchhhhhhhcccccccccccc----c------------CCcchhhhHHHHhcccccceeEEEcc
Confidence 468899999999883 33 124563 2345552 4 688884210 00112468888888
Q ss_pred ccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCC
Q 038019 74 GLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGAL 153 (866)
Q Consensus 74 ~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 153 (866)
+|+++ .+|..+.++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..|+++++|++|+|++|++.+.+
T Consensus 90 ~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~ 166 (328)
T 4fcg_A 90 SVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTEL 166 (328)
T ss_dssp SSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCC
T ss_pred CCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCcccc
Confidence 88887 67878888888999999888888 78888888888888888888888 77888888888888888888888888
Q ss_pred chhhcC---------CCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCC
Q 038019 154 PPELGN---------LAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGP 224 (866)
Q Consensus 154 p~~l~~---------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 224 (866)
|..++. +++|++|+|++|+++ .+|..+.++++|++|+|++|.+++ +|..+..+++|++|+|++|.+.+.
T Consensus 167 p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~ 244 (328)
T 4fcg_A 167 PEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRN 244 (328)
T ss_dssp CSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCB
T ss_pred ChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhh
Confidence 877654 777777777777776 666677777777777777777774 455677777777777777777777
Q ss_pred CchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCC
Q 038019 225 IPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNI 304 (866)
Q Consensus 225 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 304 (866)
+|..|.++++|+.|+ |++|.+.+.+|..+..+++|+.|+|++|++.+.+|..+.++
T Consensus 245 ~p~~~~~l~~L~~L~------------------------L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L 300 (328)
T 4fcg_A 245 YPPIFGGRAPLKRLI------------------------LKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQL 300 (328)
T ss_dssp CCCCTTCCCCCCEEE------------------------CTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGS
T ss_pred hHHHhcCCCCCCEEE------------------------CCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhc
Confidence 666666655555555 45555555666666666667777777766666677777777
Q ss_pred CCCcEEECcCCCCc
Q 038019 305 DSLEYLFLGNNSLS 318 (866)
Q Consensus 305 ~~L~~L~L~~N~l~ 318 (866)
++|+.+++..|.+.
T Consensus 301 ~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 301 PANCIILVPPHLQA 314 (328)
T ss_dssp CTTCEEECCGGGSC
T ss_pred cCceEEeCCHHHHH
Confidence 77777766665544
No 26
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=5.8e-29 Score=272.23 Aligned_cols=268 Identities=21% Similarity=0.274 Sum_probs=227.7
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
.|+++.+++.++.++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 30 ~c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 30 QCHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EEETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred cCCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 456778888888876 4565554 6899999999999987777899999999999999999988899999999999999
Q ss_pred ccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCC--CCcccccCCCCCCeEEccCCCC
Q 038019 144 FGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTG--KIPDFIGNWTKLKSLRFQGNSF 221 (866)
Q Consensus 144 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l 221 (866)
|++|.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.++. ..+..+.++++|++|++++|.+
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 9999998 5565554 789999999999999888899999999999999999864 6778889999999999999999
Q ss_pred CCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCccc
Q 038019 222 QGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATL 301 (866)
Q Consensus 222 ~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 301 (866)
+. +|..+. ++|+.|++++|.+.......+..+++|+.|+|++|.+++..+..+..+++|+.|+|++|+++ .+|..+
T Consensus 184 ~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 259 (330)
T 1xku_A 184 TT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGL 259 (330)
T ss_dssp CS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTT
T ss_pred cc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhh
Confidence 84 554443 78999999999888777778889999999999999999887778889999999999999998 778888
Q ss_pred CCCCCCcEEECcCCCCcccCCccc--------CCCCCEEEeeCCCCCC
Q 038019 302 FNIDSLEYLFLGNNSLSGTLPDQK--------SENLQKIDLSHNHLSG 341 (866)
Q Consensus 302 ~~l~~L~~L~L~~N~l~g~~p~~~--------~~~L~~L~Ls~N~l~g 341 (866)
..+++|++|+|++|++++..+..+ ...++.|++++|++..
T Consensus 260 ~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 260 ADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred ccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 999999999999999986544332 2568889999998863
No 27
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=1.6e-29 Score=297.45 Aligned_cols=287 Identities=19% Similarity=0.128 Sum_probs=228.6
Q ss_pred EEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCC
Q 038019 68 TKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTN 147 (866)
Q Consensus 68 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 147 (866)
+.++++++++++ +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|+.|.++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 789999999996 777665 89999999999999888889999999999999999999988999999999999999999
Q ss_pred CCCCCCchhhcCCCCccEEEeecCCCCC-CChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCC--CeEEccCCCC--C
Q 038019 148 NFSGALPPELGNLAKLEQLYIDSCGAGG-EIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKL--KSLRFQGNSF--Q 222 (866)
Q Consensus 148 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~l--~ 222 (866)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++. .+..+++| +.|++++|.+ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 998 56665 89999999999999998 4678999999999999999999864 34455555 9999999999 7
Q ss_pred CCCchhhcCC--------------------------CCCCEEEccCccCC----------------------------CC
Q 038019 223 GPIPSSLSKL--------------------------ASLESLQMSDIYNV----------------------------SS 248 (866)
Q Consensus 223 ~~~p~~~~~l--------------------------~~L~~L~l~~n~~~----------------------------~~ 248 (866)
+..|..+..+ ++|+.|++++|... ..
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~ 264 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWK 264 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHH
Confidence 7766666553 34445555444210 00
Q ss_pred C---chhhhcCCCCCceeccCcccccCCCccc------------------------------------------------
Q 038019 249 S---LDFVMSLKNLTDLSLRNALITGTIPFGI------------------------------------------------ 277 (866)
Q Consensus 249 ~---~~~~~~l~~L~~L~L~~n~l~~~~p~~~------------------------------------------------ 277 (866)
. .......++|++|++++|.+++.+|..+
T Consensus 265 ~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~ 344 (562)
T 3a79_B 265 CSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFI 344 (562)
T ss_dssp HHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCC
T ss_pred HHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcc
Confidence 0 0001112366666666676666555543
Q ss_pred -----CCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccC--Cc--ccCCCCCEEEeeCCCCCCccCcccc
Q 038019 278 -----GELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTL--PD--QKSENLQKIDLSHNHLSGTFPLWVN 348 (866)
Q Consensus 278 -----~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~--p~--~~~~~L~~L~Ls~N~l~g~~p~~~~ 348 (866)
..+++|+.|++++|.+++.+|..+..+++|++|+|++|++++.. |. ...++|+.|++++|++++.+|....
T Consensus 345 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 424 (562)
T 3a79_B 345 HMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTC 424 (562)
T ss_dssp CCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCC
T ss_pred cccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhh
Confidence 67899999999999999999999999999999999999999632 22 3358999999999999997776432
Q ss_pred ----ccccccccccccccc
Q 038019 349 ----SELQMNLAVNNFKFD 363 (866)
Q Consensus 349 ----~~~~l~l~~N~~~~~ 363 (866)
....|++++|.+++.
T Consensus 425 ~~l~~L~~L~l~~n~l~~~ 443 (562)
T 3a79_B 425 AWAESILVLNLSSNMLTGS 443 (562)
T ss_dssp CCCTTCCEEECCSSCCCGG
T ss_pred cCcccCCEEECCCCCCCcc
Confidence 223499999999765
No 28
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=2.1e-29 Score=276.02 Aligned_cols=273 Identities=23% Similarity=0.322 Sum_probs=236.0
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
.|+++.+++++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 32 ~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp EEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred cccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 467888999998887 5676664 6899999999999988888999999999999999999988899999999999999
Q ss_pred ccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCC--CCCcccccCCCCCCeEEccCCCC
Q 038019 144 FGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFT--GKIPDFIGNWTKLKSLRFQGNSF 221 (866)
Q Consensus 144 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~L~~N~l 221 (866)
|++|.++ .+|..+. ++|++|+|++|.++...+..|.++++|++|++++|.++ +..+..+..+ +|+.|++++|.+
T Consensus 109 L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 109 ISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 9999998 5666655 89999999999999888888999999999999999996 3677888888 999999999999
Q ss_pred CCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCccc
Q 038019 222 QGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATL 301 (866)
Q Consensus 222 ~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 301 (866)
++ +|..+. ++|+.|++++|.+.......+..+++|+.|+|++|.+++..+..+..+++|+.|++++|+++ .+|..+
T Consensus 185 ~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 260 (332)
T 2ft3_A 185 TG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGL 260 (332)
T ss_dssp SS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTG
T ss_pred Cc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhh
Confidence 86 555443 78999999999998887788899999999999999999888888999999999999999998 788889
Q ss_pred CCCCCCcEEECcCCCCcccCCccc--------CCCCCEEEeeCCCCC--CccCccc
Q 038019 302 FNIDSLEYLFLGNNSLSGTLPDQK--------SENLQKIDLSHNHLS--GTFPLWV 347 (866)
Q Consensus 302 ~~l~~L~~L~L~~N~l~g~~p~~~--------~~~L~~L~Ls~N~l~--g~~p~~~ 347 (866)
..+++|++|+|++|++++..+... ...|+.|++++|++. +..|..+
T Consensus 261 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~ 316 (332)
T 2ft3_A 261 PDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATF 316 (332)
T ss_dssp GGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGG
T ss_pred hcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccc
Confidence 999999999999999986544322 246889999999987 4444443
No 29
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.97 E-value=1.2e-29 Score=297.90 Aligned_cols=304 Identities=20% Similarity=0.234 Sum_probs=200.8
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCC-CCCccccCCCCCCEe
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSG-PVPRELGNLKELTVL 142 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L 142 (866)
..++++|++++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++ ..|..|+++++|++|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 4579999999999999888999999999999999999998888889999999999999999986 467889999999999
Q ss_pred eccCCCCCCCCc-hhhcCCCCccEEEeecCCCCCCChhhhhc------------------------CcCCCEEEecCCCC
Q 038019 143 AFGTNNFSGALP-PELGNLAKLEQLYIDSCGAGGEIPSTFAK------------------------LRNMQTLWASDNPF 197 (866)
Q Consensus 143 ~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~~~~------------------------l~~L~~L~L~~N~l 197 (866)
+|++|.+.+.+| ..+.++++|++|+|++|.+++..|..+.. +++|++|++++|++
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l 208 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNL 208 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBC
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcc
Confidence 999998544554 67899999999999999988877766543 56777777777777
Q ss_pred CCCC----------------------------------------------------------------------------
Q 038019 198 TGKI---------------------------------------------------------------------------- 201 (866)
Q Consensus 198 ~~~~---------------------------------------------------------------------------- 201 (866)
++..
T Consensus 209 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l 288 (549)
T 2z81_A 209 ARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTI 288 (549)
T ss_dssp TTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEE
T ss_pred ccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccc
Confidence 6521
Q ss_pred -------------------------------------cccc-cCCCCCCeEEccCCCCCCCCch---hhcCCCCCCEEEc
Q 038019 202 -------------------------------------PDFI-GNWTKLKSLRFQGNSFQGPIPS---SLSKLASLESLQM 240 (866)
Q Consensus 202 -------------------------------------p~~l-~~l~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~l 240 (866)
|..+ ..+++|++|+|++|++.+.+|. .++.+++|+.|++
T Consensus 289 ~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~L 368 (549)
T 2z81_A 289 RRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVL 368 (549)
T ss_dssp ESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEEC
T ss_pred cccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEc
Confidence 1111 1244445555555554443322 2344455555555
Q ss_pred cCccCCCCCc--hhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCc
Q 038019 241 SDIYNVSSSL--DFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLS 318 (866)
Q Consensus 241 ~~n~~~~~~~--~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 318 (866)
++|.+..... ..+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|.++. +|..+ .++|++|+|++|+++
T Consensus 369 s~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~ 444 (549)
T 2z81_A 369 SQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLD 444 (549)
T ss_dssp TTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCS
T ss_pred cCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChh
Confidence 5554433221 23455555666666666555 345555555556666666665542 22222 134555555555555
Q ss_pred ccCCcccCCCCCEEEeeCCCCCCccCcccc-ccc-cccccccccccccCC-CccCCCcc
Q 038019 319 GTLPDQKSENLQKIDLSHNHLSGTFPLWVN-SEL-QMNLAVNNFKFDISN-ISVFPGLN 374 (866)
Q Consensus 319 g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~-~~~-~l~l~~N~~~~~~~~-~~~~p~l~ 374 (866)
+.+ ...++|+.|+|++|+++ .+|.... ..+ .|++++|++++.... +..++.+.
T Consensus 445 ~~~--~~l~~L~~L~Ls~N~l~-~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 500 (549)
T 2z81_A 445 SFS--LFLPRLQELYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQ 500 (549)
T ss_dssp CCC--CCCTTCCEEECCSSCCS-SCCCGGGCTTCCEEECCSSCCCCCCTTGGGGCTTCC
T ss_pred hhc--ccCChhcEEECCCCccC-cCCCcccCccCCEEecCCCccCCcCHHHHhcCcccC
Confidence 432 23467888888888887 5665321 233 388888888765432 23344443
No 30
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.7e-29 Score=297.94 Aligned_cols=155 Identities=26% Similarity=0.225 Sum_probs=110.6
Q ss_pred CCCCeEEccCCCCCCCC--chhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCC-cccCCCCCcCE
Q 038019 209 TKLKSLRFQGNSFQGPI--PSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIP-FGIGELQMLQI 285 (866)
Q Consensus 209 ~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~ 285 (866)
++|+.|++++|.+++.. +..+.++++|+.|++++|.+...... +..+++|+.|++++|.+.+..+ ..+..+++|+.
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 44555555555555332 56677788888898888876644433 6778888888888888877655 46777888888
Q ss_pred EeeecCcCcccCCcccCCCCCCcEEECcCCCCc-ccCCccc--CCCCCEEEeeCCCCCCccCccccc--cc-cccccccc
Q 038019 286 LDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLS-GTLPDQK--SENLQKIDLSHNHLSGTFPLWVNS--EL-QMNLAVNN 359 (866)
Q Consensus 286 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-g~~p~~~--~~~L~~L~Ls~N~l~g~~p~~~~~--~~-~l~l~~N~ 359 (866)
|++++|.+.+..|..+..+++|++|+|++|.++ +.+|... .++|+.|+|++|++++..|.++.. .+ .|++++|.
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 505 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCc
Confidence 888888888777778888888888888888876 4566433 367888888888888777766653 23 37888887
Q ss_pred ccccc
Q 038019 360 FKFDI 364 (866)
Q Consensus 360 ~~~~~ 364 (866)
+++..
T Consensus 506 l~~~~ 510 (570)
T 2z63_A 506 LKSVP 510 (570)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 76543
No 31
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.96 E-value=4.6e-29 Score=307.14 Aligned_cols=296 Identities=22% Similarity=0.238 Sum_probs=243.5
Q ss_pred eeeEEEEEEcccCcCCCC-CcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCcc--ccCCCCCC
Q 038019 64 TCHITKLRVYGLNKKGVI-PEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRE--LGNLKELT 140 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~-p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--l~~l~~L~ 140 (866)
..+++.|+|++|+..+.+ |..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++.+|.. |+++++|+
T Consensus 47 l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 468999999999877777 788999999999999999999989999999999999999999999877765 99999999
Q ss_pred EeeccCCCCCCCCc-hhhcCCCCccEEEeecCCCCCCChhhhhcC--cCCCEEEecCCCCCCCCcccccCCCC------C
Q 038019 141 VLAFGTNNFSGALP-PELGNLAKLEQLYIDSCGAGGEIPSTFAKL--RNMQTLWASDNPFTGKIPDFIGNWTK------L 211 (866)
Q Consensus 141 ~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~l~~l~~------L 211 (866)
+|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..|..+ ++|+.|+++.|.+.+..|..++.+++ |
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L 206 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVL 206 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCB
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCce
Confidence 99999999988765 589999999999999999999999999888 88999999999998888777766655 8
Q ss_pred CeEEccCCCCCCCCchhhcC--------------------------------------CCCCCEEEccCccCCCCCchhh
Q 038019 212 KSLRFQGNSFQGPIPSSLSK--------------------------------------LASLESLQMSDIYNVSSSLDFV 253 (866)
Q Consensus 212 ~~L~L~~N~l~~~~p~~~~~--------------------------------------l~~L~~L~l~~n~~~~~~~~~~ 253 (866)
+.|+|++|.+++..+..+.. .++|+.|++++|.+.......+
T Consensus 207 ~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~ 286 (844)
T 3j0a_A 207 EILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVF 286 (844)
T ss_dssp SEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCS
T ss_pred eEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhh
Confidence 88999888777655543322 2578888888888776666677
Q ss_pred hcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCccc--CCCCCE
Q 038019 254 MSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQK--SENLQK 331 (866)
Q Consensus 254 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~--~~~L~~ 331 (866)
..+++|+.|+|++|.+++..+..|..+++|+.|+|++|.+++..|..+..+++|++|+|++|++++..+... .++|+.
T Consensus 287 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 366 (844)
T 3j0a_A 287 ETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQT 366 (844)
T ss_dssp SSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCE
T ss_pred hcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCE
Confidence 888888888888888888888888888888888888888888778888888888888888888876555432 478888
Q ss_pred EEeeCCCCCCccCccccccccccccccccc
Q 038019 332 IDLSHNHLSGTFPLWVNSELQMNLAVNNFK 361 (866)
Q Consensus 332 L~Ls~N~l~g~~p~~~~~~~~l~l~~N~~~ 361 (866)
|+|++|.+++... +.....+++++|++.
T Consensus 367 L~Ls~N~l~~i~~--~~~L~~L~l~~N~l~ 394 (844)
T 3j0a_A 367 LDLRDNALTTIHF--IPSIPDIFLSGNKLV 394 (844)
T ss_dssp EEEETCCSCCCSS--CCSCSEEEEESCCCC
T ss_pred EECCCCCCCcccC--CCCcchhccCCCCcc
Confidence 8888888875322 222223556666554
No 32
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=4.6e-29 Score=300.68 Aligned_cols=297 Identities=20% Similarity=0.220 Sum_probs=237.2
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++++|++++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 57999999999999988888999999999999999999989999999999999999999999766668999999999999
Q ss_pred cCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCccccc--CCCCCCeEEccCCCCC
Q 038019 145 GTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIG--NWTKLKSLRFQGNSFQ 222 (866)
Q Consensus 145 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~L~~N~l~ 222 (866)
++|.+++..|..|+++++|++|+|++|.+++..|..+.++++|++|++++|.+++..+..+. .+++|+.|++++|.++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999988888999999999999999999999999999999999999999999988777664 5689999999999999
Q ss_pred CCCchhhcCCCC---------------------------CCEEEccCccCCCCCchhhhcCCC--CCceeccCcccccCC
Q 038019 223 GPIPSSLSKLAS---------------------------LESLQMSDIYNVSSSLDFVMSLKN--LTDLSLRNALITGTI 273 (866)
Q Consensus 223 ~~~p~~~~~l~~---------------------------L~~L~l~~n~~~~~~~~~~~~l~~--L~~L~L~~n~l~~~~ 273 (866)
+..|..|..+.+ |+.|++++|.+.......+..++. |+.|+|++|.+++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 888887776544 555555555555444445555543 777777777777777
Q ss_pred CcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCccc-----CCc------ccCCCCCEEEeeCCCCCCc
Q 038019 274 PFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGT-----LPD------QKSENLQKIDLSHNHLSGT 342 (866)
Q Consensus 274 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~-----~p~------~~~~~L~~L~Ls~N~l~g~ 342 (866)
+..|+.+++|+.|++++|.+++..|..+..+++|++|++++|...+. +|. ...++|+.|++++|++++.
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~ 344 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI 344 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCC
Confidence 77777777777777777777777777777777777777777655432 221 1235777778887777776
Q ss_pred cCccccc--cc-cccccccccc
Q 038019 343 FPLWVNS--EL-QMNLAVNNFK 361 (866)
Q Consensus 343 ~p~~~~~--~~-~l~l~~N~~~ 361 (866)
.|..+.. .+ .|++++|.+.
T Consensus 345 ~~~~~~~l~~L~~L~Ls~n~~~ 366 (680)
T 1ziw_A 345 KSNMFTGLINLKYLSLSNSFTS 366 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBSC
T ss_pred ChhHhccccCCcEEECCCCchh
Confidence 6655442 22 3677766654
No 33
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=6.9e-29 Score=299.13 Aligned_cols=297 Identities=22% Similarity=0.192 Sum_probs=206.0
Q ss_pred eEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCC-----CCCc----cccCC
Q 038019 66 HITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSG-----PVPR----ELGNL 136 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-----~~p~----~l~~l 136 (866)
+++.|++++|.+++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|...+ .+|. .|..+
T Consensus 249 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l 328 (680)
T 1ziw_A 249 NLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWL 328 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTC
T ss_pred CCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccC
Confidence 37777777777777777777777777777777777776666656655555555555543332 1222 45556
Q ss_pred CCCCEeeccCCCCCCCCchhhcCCCCccEEEe----------------------------ecCCCCCCChhhhhcCcCCC
Q 038019 137 KELTVLAFGTNNFSGALPPELGNLAKLEQLYI----------------------------DSCGAGGEIPSTFAKLRNMQ 188 (866)
Q Consensus 137 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L----------------------------~~n~l~~~~p~~~~~l~~L~ 188 (866)
++|++|++++|.+++..+..|.++++|++|+| ++|++++..|..|..+++|+
T Consensus 329 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 408 (680)
T 1ziw_A 329 KCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLE 408 (680)
T ss_dssp TTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCC
Confidence 66666666666666655555555555554444 45566666778888889999
Q ss_pred EEEecCCCCCCCCc-ccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCC--CCCchhhhcCCCCCceecc
Q 038019 189 TLWASDNPFTGKIP-DFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNV--SSSLDFVMSLKNLTDLSLR 265 (866)
Q Consensus 189 ~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~--~~~~~~~~~l~~L~~L~L~ 265 (866)
.|+|++|.+++.+| ..+.++++|++|++++|++.+..+..|..+++|+.|++++|.+. ...+..+..+++|+.|+|+
T Consensus 409 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls 488 (680)
T 1ziw_A 409 VLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLS 488 (680)
T ss_dssp EEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECC
T ss_pred EEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECC
Confidence 99999998887655 67888888999999998888777778888888888888887765 2334567778888888888
Q ss_pred CcccccCCCcccCCCCCcCEEeeecCcCcccCC--------cccCCCCCCcEEECcCCCCcccCCcc---cCCCCCEEEe
Q 038019 266 NALITGTIPFGIGELQMLQILDLSFNNLTGQIP--------ATLFNIDSLEYLFLGNNSLSGTLPDQ---KSENLQKIDL 334 (866)
Q Consensus 266 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~l~~l~~L~~L~L~~N~l~g~~p~~---~~~~L~~L~L 334 (866)
+|.+++..+..|..+++|+.|++++|++++..+ ..+..+++|++|+|++|+++ .+|.. ..++|+.|+|
T Consensus 489 ~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~L 567 (680)
T 1ziw_A 489 NNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKIIDL 567 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred CCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHcccccCcceeEC
Confidence 888887777777888888888888888875422 23677788888888888887 34432 2367888888
Q ss_pred eCCCCCCccCcccc--ccc-cccccccccccc
Q 038019 335 SHNHLSGTFPLWVN--SEL-QMNLAVNNFKFD 363 (866)
Q Consensus 335 s~N~l~g~~p~~~~--~~~-~l~l~~N~~~~~ 363 (866)
++|++++..+..+. ..+ .|++++|.+++.
T Consensus 568 s~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~ 599 (680)
T 1ziw_A 568 GLNNLNTLPASVFNNQVSLKSLNLQKNLITSV 599 (680)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECTTSCCCBC
T ss_pred CCCCCCcCCHhHhCCCCCCCEEECCCCcCCcc
Confidence 88888855444333 223 378888877654
No 34
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=2.2e-28 Score=267.69 Aligned_cols=267 Identities=17% Similarity=0.189 Sum_probs=234.2
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 57899999999999988889999999999999999999888999999999999999999998 5676665 79999999
Q ss_pred cCCCCCCCCchhhcCCCCccEEEeecCCCCC--CChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCC
Q 038019 145 GTNNFSGALPPELGNLAKLEQLYIDSCGAGG--EIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQ 222 (866)
Q Consensus 145 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 222 (866)
++|.+++..+..+.++++|+.|+|++|.+.. ..+..|.++++|++|++++|.++. +|..+. ++|++|++++|.++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKIT 205 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCC
Confidence 9999998888889999999999999999964 778899999999999999999984 565554 79999999999999
Q ss_pred CCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccC
Q 038019 223 GPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLF 302 (866)
Q Consensus 223 ~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 302 (866)
+..+..|.++++|+.|++++|.+.......+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|++++..+..|.
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~ 284 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFC 284 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSS
T ss_pred ccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcC
Confidence 988999999999999999999998777778899999999999999998 7788899999999999999999987776665
Q ss_pred C------CCCCcEEECcCCCCcc-cCC-ccc--CCCCCEEEeeCCC
Q 038019 303 N------IDSLEYLFLGNNSLSG-TLP-DQK--SENLQKIDLSHNH 338 (866)
Q Consensus 303 ~------l~~L~~L~L~~N~l~g-~~p-~~~--~~~L~~L~Ls~N~ 338 (866)
. .+.|+.|++++|.+.. .++ ... ...++.++|++|+
T Consensus 285 ~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 285 PPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 3 4789999999999973 233 222 3678999999885
No 35
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=3e-28 Score=266.85 Aligned_cols=267 Identities=20% Similarity=0.214 Sum_probs=234.5
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
..+++.|++++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|..+. ++|++|+
T Consensus 53 ~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~ 129 (332)
T 2ft3_A 53 SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELR 129 (332)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEE
T ss_pred CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEE
Confidence 357899999999999888889999999999999999999888999999999999999999998 6676665 8999999
Q ss_pred ccCCCCCCCCchhhcCCCCccEEEeecCCCC--CCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCC
Q 038019 144 FGTNNFSGALPPELGNLAKLEQLYIDSCGAG--GEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSF 221 (866)
Q Consensus 144 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 221 (866)
|++|.++...+..+..+++|++|++++|.++ +..+..+..+ +|++|++++|++++ +|..+. ++|++|+|++|.+
T Consensus 130 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i 205 (332)
T 2ft3_A 130 IHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKI 205 (332)
T ss_dssp CCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCC
T ss_pred CCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcC
Confidence 9999999887778999999999999999996 4778888888 99999999999985 666554 7899999999999
Q ss_pred CCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCccc
Q 038019 222 QGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATL 301 (866)
Q Consensus 222 ~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 301 (866)
++..+..|.++++|+.|++++|.+.......+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|++++..+..+
T Consensus 206 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~ 284 (332)
T 2ft3_A 206 QAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDF 284 (332)
T ss_dssp CCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHc
Confidence 9888899999999999999999998887778999999999999999998 778889999999999999999998777766
Q ss_pred CC------CCCCcEEECcCCCCc--ccCCccc--CCCCCEEEeeCCC
Q 038019 302 FN------IDSLEYLFLGNNSLS--GTLPDQK--SENLQKIDLSHNH 338 (866)
Q Consensus 302 ~~------l~~L~~L~L~~N~l~--g~~p~~~--~~~L~~L~Ls~N~ 338 (866)
.. .++|+.|++++|.+. +..|... .+.|+.+++++|+
T Consensus 285 ~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 285 CPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 65 367999999999997 3444332 3789999999885
No 36
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.96 E-value=3.6e-28 Score=272.39 Aligned_cols=268 Identities=19% Similarity=0.180 Sum_probs=229.7
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++++|.+++..+..|..+++|++|+|++|.+++..|..|+++++|++|+|++|+++...+..|.++++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 57999999999999888889999999999999999999888888999999999999999999655556799999999999
Q ss_pred cCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecC-------------------CCCCCCCcccc
Q 038019 145 GTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASD-------------------NPFTGKIPDFI 205 (866)
Q Consensus 145 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-------------------N~l~~~~p~~l 205 (866)
++|.+++..+..+..+++|++|+|++|.+++.. +..+++|++|++++ |.++.. |..
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~-~~~- 223 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVV-RGP- 223 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEE-ECC-
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccccccCCCCcceEEECCCCeeeec-ccc-
Confidence 999999888889999999999999999998764 34445555555544 444422 222
Q ss_pred cCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCE
Q 038019 206 GNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQI 285 (866)
Q Consensus 206 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 285 (866)
..++|+.|++++|.+++. ..+..+++|+.|++++|.+....+..+..+++|+.|+|++|.+++ ++..+..+++|+.
T Consensus 224 -~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~ 299 (390)
T 3o6n_A 224 -VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKV 299 (390)
T ss_dssp -CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCE
T ss_pred -ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCE
Confidence 246899999999999864 578999999999999999887777889999999999999999986 4666788999999
Q ss_pred EeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCcccCCCCCEEEeeCCCCCCcc
Q 038019 286 LDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQKSENLQKIDLSHNHLSGTF 343 (866)
Q Consensus 286 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~ 343 (866)
|+|++|+++ .+|..+..+++|++|+|++|+++.. +....++|+.|++++|++++.-
T Consensus 300 L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 300 LDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-KLSTHHTLKNLTLSHNDWDCNS 355 (390)
T ss_dssp EECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-CCCTTCCCSEEECCSSCEEHHH
T ss_pred EECCCCcce-ecCccccccCcCCEEECCCCcccee-CchhhccCCEEEcCCCCccchh
Confidence 999999998 5677788899999999999999854 5556789999999999998753
No 37
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.96 E-value=1.3e-27 Score=274.25 Aligned_cols=289 Identities=26% Similarity=0.325 Sum_probs=221.0
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++++|.+++..+ +.++++|++|+|++|.+++..+ ++++++|++|+|++|.+++..+ +.++++|++|+|
T Consensus 68 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 141 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 141 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEE
T ss_pred cCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEEC
Confidence 478888998888887654 8888899999999998886544 8888999999999998886433 888889999999
Q ss_pred cCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCC
Q 038019 145 GTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGP 224 (866)
Q Consensus 145 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 224 (866)
++|.+++. + .++.+++|++|+++ |.+.+.. .+.++++|++|++++|.+++. ..+..+++|++|++++|.+.+.
T Consensus 142 ~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 214 (466)
T 1o6v_A 142 SSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDI 214 (466)
T ss_dssp EEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred CCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccc
Confidence 98888753 3 47788888888886 4444433 288888999999999988754 3477888999999999988866
Q ss_pred CchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCC
Q 038019 225 IPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNI 304 (866)
Q Consensus 225 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 304 (866)
.+ ++.+++|+.|++++|.+... +.+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+
T Consensus 215 ~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l 286 (466)
T 1o6v_A 215 TP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 286 (466)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred cc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCC
Confidence 55 77788899999988877643 467788888889998888887655 7788888888888888886544 7788
Q ss_pred CCCcEEECcCCCCcccCCcccCCCCCEEEeeCCCCCCccCccccccc-cccccccccccccCCCccCCCccc
Q 038019 305 DSLEYLFLGNNSLSGTLPDQKSENLQKIDLSHNHLSGTFPLWVNSEL-QMNLAVNNFKFDISNISVFPGLNC 375 (866)
Q Consensus 305 ~~L~~L~L~~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~~~-~l~l~~N~~~~~~~~~~~~p~l~~ 375 (866)
++|+.|+|++|++++..+...+++|+.|+|++|++++..|......+ .|++++|.+.+. ..+..++.|..
T Consensus 287 ~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~ 357 (466)
T 1o6v_A 287 TALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV-SSLANLTNINW 357 (466)
T ss_dssp TTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC-GGGTTCTTCCE
T ss_pred CccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc-hhhccCCCCCE
Confidence 88888888888888766655567888888888888887763322333 388888887754 33334444433
No 38
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=1.5e-27 Score=262.80 Aligned_cols=291 Identities=23% Similarity=0.297 Sum_probs=195.1
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++.++.+.. ++ .+..+++|++|+|++|.+++. +. +.++++|++|+|++|.++. + +.|.++++|++|+|
T Consensus 44 ~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~l 117 (347)
T 4fmz_A 44 ESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELYL 117 (347)
T ss_dssp TTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEEC
T ss_pred ccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEEC
Confidence 356777777777654 33 377777777777777777643 33 7777777777777777764 3 35777777777777
Q ss_pred cCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCC
Q 038019 145 GTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGP 224 (866)
Q Consensus 145 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 224 (866)
++|.+++..+ +..+++|+.|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+.
T Consensus 118 ~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~ 192 (347)
T 4fmz_A 118 NEDNISDISP--LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI 192 (347)
T ss_dssp TTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC
T ss_pred cCCcccCchh--hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccc
Confidence 7777775432 77777777777777765554444 7777777777777777765433 66777777777777777644
Q ss_pred CchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCC
Q 038019 225 IPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNI 304 (866)
Q Consensus 225 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 304 (866)
.+ +..+++|+.|++++|.+..... +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++. ..+..+
T Consensus 193 ~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l 264 (347)
T 4fmz_A 193 SP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDL 264 (347)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTC
T ss_pred cc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcC
Confidence 32 6777777777777776654332 6667777777777777775443 67777777777777777653 456777
Q ss_pred CCCcEEECcCCCCcccCCcccCCCCCEEEeeCCCCCCccCccccc--cc-cccccccccccccCCCccCCCccc
Q 038019 305 DSLEYLFLGNNSLSGTLPDQKSENLQKIDLSHNHLSGTFPLWVNS--EL-QMNLAVNNFKFDISNISVFPGLNC 375 (866)
Q Consensus 305 ~~L~~L~L~~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~--~~-~l~l~~N~~~~~~~~~~~~p~l~~ 375 (866)
++|++|++++|++++.......++|+.|++++|++++..|..+.. .+ .|++++|.++...+ +..++.+..
T Consensus 265 ~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~ 337 (347)
T 4fmz_A 265 TKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDS 337 (347)
T ss_dssp TTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSE
T ss_pred CCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccce
Confidence 777777777777775422233467777777777777766655442 22 37777777765433 333444433
No 39
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=3.5e-28 Score=287.78 Aligned_cols=284 Identities=17% Similarity=0.141 Sum_probs=249.8
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++++|.+++..|..|..+++|++|+|++|.+++..|..|+++++|++|+|++|.|++..+..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 57999999999999988889999999999999999999988888999999999999999999766667899999999999
Q ss_pred cCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCC
Q 038019 145 GTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGP 224 (866)
Q Consensus 145 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 224 (866)
++|.+++..|..|+.+++|++|+|++|.+++.. +..+++|+.|++++|.+++ +...++|+.|++++|.+...
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~ 226 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV 226 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEE
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCccccc
Confidence 999999999999999999999999999998763 5678999999999999874 34567899999999999854
Q ss_pred CchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCC
Q 038019 225 IPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNI 304 (866)
Q Consensus 225 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 304 (866)
.+. + .++|+.|+|++|.+.. ...+..+++|+.|+|++|.+++..|..|+.+++|+.|+|++|.+++ +|..+..+
T Consensus 227 ~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l 300 (597)
T 3oja_B 227 RGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPI 300 (597)
T ss_dssp ECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCC
T ss_pred ccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccC
Confidence 322 2 3689999999998875 3678899999999999999999999999999999999999999986 57777889
Q ss_pred CCCcEEECcCCCCcccCCccc--CCCCCEEEeeCCCCCCccCccccccccccccccccccc
Q 038019 305 DSLEYLFLGNNSLSGTLPDQK--SENLQKIDLSHNHLSGTFPLWVNSELQMNLAVNNFKFD 363 (866)
Q Consensus 305 ~~L~~L~L~~N~l~g~~p~~~--~~~L~~L~Ls~N~l~g~~p~~~~~~~~l~l~~N~~~~~ 363 (866)
++|+.|+|++|.+++ +|... +++|+.|+|++|++++..+..+.....|++++|++.|+
T Consensus 301 ~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 301 PTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp TTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHH
T ss_pred CCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCCCCCCh
Confidence 999999999999994 55433 48999999999999977544444444599999999876
No 40
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=2.2e-27 Score=261.55 Aligned_cols=279 Identities=25% Similarity=0.324 Sum_probs=236.7
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
..++++|++++|.+++..+ +..+++|++|+|++|.++. ++ .+.++++|++|+|++|.+++. +. +..+++|++|+
T Consensus 65 ~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~ 138 (347)
T 4fmz_A 65 LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISDI-SP-LANLTKMYSLN 138 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCCC-GG-GTTCTTCCEEE
T ss_pred cCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccCc-hh-hccCCceeEEE
Confidence 3579999999999986544 9999999999999999985 44 699999999999999999854 33 99999999999
Q ss_pred ccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCC
Q 038019 144 FGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQG 223 (866)
Q Consensus 144 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 223 (866)
+++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+.+
T Consensus 139 l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 213 (347)
T 4fmz_A 139 LGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITD 213 (347)
T ss_dssp CTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCC
Confidence 99997765554 49999999999999999987655 8899999999999999986443 8889999999999999986
Q ss_pred CCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCC
Q 038019 224 PIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFN 303 (866)
Q Consensus 224 ~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 303 (866)
..+ +..+++|+.|++++|.+..... +..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++. ..+..
T Consensus 214 ~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~ 285 (347)
T 4fmz_A 214 ITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNN 285 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGG
T ss_pred Cch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcC
Confidence 544 8899999999999998875543 88899999999999999864 4688999999999999999864 45888
Q ss_pred CCCCcEEECcCCCCcccCCcc--cCCCCCEEEeeCCCCCCccCccccccc-cccccccccc
Q 038019 304 IDSLEYLFLGNNSLSGTLPDQ--KSENLQKIDLSHNHLSGTFPLWVNSEL-QMNLAVNNFK 361 (866)
Q Consensus 304 l~~L~~L~L~~N~l~g~~p~~--~~~~L~~L~Ls~N~l~g~~p~~~~~~~-~l~l~~N~~~ 361 (866)
+++|+.|++++|++++..|.. ..++|+.|++++|++++..|......+ .+++++|.++
T Consensus 286 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 286 LSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVIK 346 (347)
T ss_dssp CTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC---
T ss_pred CCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhhccc
Confidence 999999999999999776653 358999999999999998883322333 4899998874
No 41
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.96 E-value=5.7e-28 Score=284.80 Aligned_cols=302 Identities=20% Similarity=0.178 Sum_probs=224.3
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 52 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 131 (570)
T 2z63_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (570)
T ss_dssp SSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEEC
T ss_pred CCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEec
Confidence 45666777776666666666666777777777777666655666666666666666666666544445666667777777
Q ss_pred cCCCCCC-CCchhhcCCCCccEEEeecCCCCCCChhhhh-----------------------------------------
Q 038019 145 GTNNFSG-ALPPELGNLAKLEQLYIDSCGAGGEIPSTFA----------------------------------------- 182 (866)
Q Consensus 145 s~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~----------------------------------------- 182 (866)
++|.+++ .+|..|+++++|++|++++|.+++..+..|.
T Consensus 132 ~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~ 211 (570)
T 2z63_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNF 211 (570)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred CCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEeccccc
Confidence 7766665 3566666677777766666655443322211
Q ss_pred --------------------------------------------------------------------------------
Q 038019 183 -------------------------------------------------------------------------------- 182 (866)
Q Consensus 183 -------------------------------------------------------------------------------- 182 (866)
T Consensus 212 ~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~ 291 (570)
T 2z63_A 212 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVS 291 (570)
T ss_dssp SCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEES
T ss_pred ccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecC
Confidence
Q ss_pred -----------------------------------------------------cCcCCCEEEecCCCCCCCC--cccccC
Q 038019 183 -----------------------------------------------------KLRNMQTLWASDNPFTGKI--PDFIGN 207 (866)
Q Consensus 183 -----------------------------------------------------~l~~L~~L~L~~N~l~~~~--p~~l~~ 207 (866)
.+++|++|++++|.+++.. +..+..
T Consensus 292 ~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~ 371 (570)
T 2z63_A 292 VTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 371 (570)
T ss_dssp CEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHHT
T ss_pred ccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCccccccccccc
Confidence 1223333334444433221 456778
Q ss_pred CCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCc-hhhhcCCCCCceeccCcccccCCCcccCCCCCcCEE
Q 038019 208 WTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSL-DFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQIL 286 (866)
Q Consensus 208 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 286 (866)
+++|++|++++|.+.+..+. +..+++|+.|++++|.+..... ..+..+++|+.|++++|.+.+..|..+..+++|+.|
T Consensus 372 ~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 372 TTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp CSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred cCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 99999999999999865544 9999999999999998875543 568889999999999999999999999999999999
Q ss_pred eeecCcCc-ccCCcccCCCCCCcEEECcCCCCcccCCccc--CCCCCEEEeeCCCCCCccCccccc--cc-ccccccccc
Q 038019 287 DLSFNNLT-GQIPATLFNIDSLEYLFLGNNSLSGTLPDQK--SENLQKIDLSHNHLSGTFPLWVNS--EL-QMNLAVNNF 360 (866)
Q Consensus 287 ~Ls~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~--~~~L~~L~Ls~N~l~g~~p~~~~~--~~-~l~l~~N~~ 360 (866)
++++|.++ +.+|..+..+++|++|+|++|++++..|... .++|+.|++++|++++..|..+.. .+ .+++++|++
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~ 530 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPW 530 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcc
Confidence 99999998 5789999999999999999999998877654 479999999999999988776643 23 499999999
Q ss_pred ccccCCC
Q 038019 361 KFDISNI 367 (866)
Q Consensus 361 ~~~~~~~ 367 (866)
.|+++..
T Consensus 531 ~~~~~~~ 537 (570)
T 2z63_A 531 DCSCPRI 537 (570)
T ss_dssp CCCTTTT
T ss_pred cCCCcch
Confidence 9885543
No 42
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.95 E-value=2.6e-27 Score=271.90 Aligned_cols=290 Identities=28% Similarity=0.321 Sum_probs=242.1
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++.++.+.. +| .+..+++|++|+|++|.+++..+ +.++++|++|+|++|.+++..+ ++++++|++|+|
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 478999999998875 55 48899999999999999986544 9999999999999999996555 999999999999
Q ss_pred cCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCC
Q 038019 145 GTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGP 224 (866)
Q Consensus 145 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 224 (866)
++|.+++..+ +.++++|++|+|++|.+++. + .+..+++|++|+++ |.+.+.. .+.++++|+.|++++|.+.+.
T Consensus 120 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~ 192 (466)
T 1o6v_A 120 FNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI 192 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC
Confidence 9999987643 99999999999999998874 3 48999999999997 5565443 389999999999999999854
Q ss_pred CchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCC
Q 038019 225 IPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNI 304 (866)
Q Consensus 225 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 304 (866)
..+..+++|+.|++++|.+..... +..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+ +..+
T Consensus 193 --~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 264 (466)
T 1o6v_A 193 --SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGL 264 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred --hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcC
Confidence 458899999999999998765433 77899999999999999864 367889999999999999997655 8899
Q ss_pred CCCcEEECcCCCCcccCCcccCCCCCEEEeeCCCCCCccCccccccc-cccccccccccccCCCccCCCcccc
Q 038019 305 DSLEYLFLGNNSLSGTLPDQKSENLQKIDLSHNHLSGTFPLWVNSEL-QMNLAVNNFKFDISNISVFPGLNCL 376 (866)
Q Consensus 305 ~~L~~L~L~~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~~~-~l~l~~N~~~~~~~~~~~~p~l~~l 376 (866)
++|+.|++++|.+++..+....++|+.|++++|++++..|..-...+ .|++++|.+.+... +..++.|..+
T Consensus 265 ~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L 336 (466)
T 1o6v_A 265 TKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP-VSSLTKLQRL 336 (466)
T ss_dssp TTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEE
T ss_pred CCCCEEECCCCccCccccccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh-hccCccCCEe
Confidence 99999999999999876655668999999999999987663222334 49999999886533 4445555433
No 43
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=9.1e-29 Score=273.36 Aligned_cols=267 Identities=21% Similarity=0.172 Sum_probs=214.1
Q ss_pred ccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCC
Q 038019 74 GLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGAL 153 (866)
Q Consensus 74 ~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 153 (866)
+++++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..
T Consensus 40 ~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 116 (353)
T 2z80_A 40 SGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLS 116 (353)
T ss_dssp STTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCC
T ss_pred CCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCC
Confidence 44444 4565554 48889999998888766668888899999999999888877888888889999999999888665
Q ss_pred chhhcCCCCccEEEeecCCCCCCCh-hhhhcCcCCCEEEecCC-CCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcC
Q 038019 154 PPELGNLAKLEQLYIDSCGAGGEIP-STFAKLRNMQTLWASDN-PFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSK 231 (866)
Q Consensus 154 p~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 231 (866)
+..++++++|++|+|++|.++...+ ..|..+++|++|++++| .+++..+..+.++++|++|++++|.+.+..|..|.+
T Consensus 117 ~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~ 196 (353)
T 2z80_A 117 SSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKS 196 (353)
T ss_dssp HHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred HhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhc
Confidence 5568888899999998888886544 47888889999999888 466556778888888999999999888888888888
Q ss_pred CCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCccc---CCCCCcCEEeeecCcCcc----cCCcccCCC
Q 038019 232 LASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGI---GELQMLQILDLSFNNLTG----QIPATLFNI 304 (866)
Q Consensus 232 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~----~~p~~l~~l 304 (866)
+++|+.|++++|.+.......+..+++|+.|++++|.+++..+..+ .....++.++|+++.+.+ .+|..+..+
T Consensus 197 l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l 276 (353)
T 2z80_A 197 IQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQI 276 (353)
T ss_dssp CSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTC
T ss_pred cccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcc
Confidence 8899999998888765444456678899999999999887655433 345778899999999876 467788899
Q ss_pred CCCcEEECcCCCCcccCCcc---cCCCCCEEEeeCCCCCCccC
Q 038019 305 DSLEYLFLGNNSLSGTLPDQ---KSENLQKIDLSHNHLSGTFP 344 (866)
Q Consensus 305 ~~L~~L~L~~N~l~g~~p~~---~~~~L~~L~Ls~N~l~g~~p 344 (866)
++|++|+|++|+++ .+|.. ..++|+.|+|++|++++..|
T Consensus 277 ~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 277 SGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 99999999999999 45554 34789999999999998876
No 44
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1.1e-28 Score=266.97 Aligned_cols=247 Identities=23% Similarity=0.243 Sum_probs=165.1
Q ss_pred EEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCC--CCCccccCCCCCCEeeccC
Q 038019 69 KLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSG--PVPRELGNLKELTVLAFGT 146 (866)
Q Consensus 69 ~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~Ls~ 146 (866)
.+++.+++++ .+|..+. ++|++|+|++|.++...+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 3444444444 3454443 578899999998885555567888899999999988873 2366677788888888888
Q ss_pred CCCCCCCchhhcCCCCccEEEeecCCCCCCCh-hhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCC-C
Q 038019 147 NNFSGALPPELGNLAKLEQLYIDSCGAGGEIP-STFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQG-P 224 (866)
Q Consensus 147 N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~ 224 (866)
|.++ .+|..+..+++|++|+|++|.+++..+ ..+..+++|++|++++|.+++..+..+..+++|++|+|++|.+.+ .
T Consensus 88 n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 166 (306)
T 2z66_A 88 NGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 166 (306)
T ss_dssp CSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred Cccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccccc
Confidence 8887 466678888888888888888876655 567788888888888888877777777888888888888888775 4
Q ss_pred CchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCC
Q 038019 225 IPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNI 304 (866)
Q Consensus 225 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 304 (866)
+|..+..+++|+.|++++|.+....+..+..+++|+.|+|++|.+++..+..+..+++|+.|+|++|++++..|..+..+
T Consensus 167 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 246 (306)
T 2z66_A 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 246 (306)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCC
T ss_pred chhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhh
Confidence 56666666666666666655544444444455555555555555554444445555555555555555555555555444
Q ss_pred C-CCcEEECcCCCCcc
Q 038019 305 D-SLEYLFLGNNSLSG 319 (866)
Q Consensus 305 ~-~L~~L~L~~N~l~g 319 (866)
+ +|++|+|++|.+++
T Consensus 247 ~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 247 PSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTCCEEECTTCCEEC
T ss_pred hccCCEEEccCCCeec
Confidence 2 45555555554443
No 45
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.95 E-value=3.1e-27 Score=269.55 Aligned_cols=273 Identities=19% Similarity=0.127 Sum_probs=226.5
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++++|++++. | .|..+++|++|+|++|.+++. | ++++++|++|+|++|++++. + ++++++|++|+|
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEEC
Confidence 4789999999999975 5 699999999999999999874 4 89999999999999999974 3 899999999999
Q ss_pred cCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCC
Q 038019 145 GTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGP 224 (866)
Q Consensus 145 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 224 (866)
++|++++. | ++.+++|++|++++|++++. + ++.+++|++|++++|...+.+ .+..+++|+.|++++|++++
T Consensus 114 ~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~- 184 (457)
T 3bz5_A 114 DTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE- 184 (457)
T ss_dssp CSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-
T ss_pred CCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-
Confidence 99999974 4 89999999999999999885 3 889999999999999766666 47889999999999999997
Q ss_pred CchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCC
Q 038019 225 IPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNI 304 (866)
Q Consensus 225 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 304 (866)
+| +..+++|+.|++++|.+... .+..+++|+.|++++|.+++ +| ++.+++|+.|++++|++++..+..+..+
T Consensus 185 l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L 256 (457)
T 3bz5_A 185 LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKL 256 (457)
T ss_dssp CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTC
T ss_pred ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCC
Confidence 44 88899999999999988765 37788999999999999998 55 8899999999999999998765555544
Q ss_pred C-------CCcEEECcCCCCcccCCcccCCCCCEEEeeCCCCCCccCccccc----------cc-ccccccccccc
Q 038019 305 D-------SLEYLFLGNNSLSGTLPDQKSENLQKIDLSHNHLSGTFPLWVNS----------EL-QMNLAVNNFKF 362 (866)
Q Consensus 305 ~-------~L~~L~L~~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~----------~~-~l~l~~N~~~~ 362 (866)
. +|+.|++++|.+.+.+|...+++|+.|++++|.+.+.+|..... .+ .|++++|++++
T Consensus 257 ~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~ 332 (457)
T 3bz5_A 257 TTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTE 332 (457)
T ss_dssp CEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSC
T ss_pred CEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccc
Confidence 4 55666677777777777666688999999999888887753221 12 26666666665
No 46
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=1.5e-27 Score=260.42 Aligned_cols=225 Identities=22% Similarity=0.270 Sum_probs=186.9
Q ss_pred CCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEE
Q 038019 87 TLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQL 166 (866)
Q Consensus 87 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 166 (866)
....++.|+|++|.++ .+|..+.++++|++|+|++|.++ .+|..|+++++|++|+|++|.++ .+|..++++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3578999999999998 78888999999999999999999 89999999999999999999999 789999999999999
Q ss_pred EeecCCCCCCChhhhhc---------CcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCE
Q 038019 167 YIDSCGAGGEIPSTFAK---------LRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLES 237 (866)
Q Consensus 167 ~L~~n~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 237 (866)
+|++|++.+.+|..+.. +++|++|+|++|+++ .+|..++++++|++|+|++|.+++ +|.
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~---------- 223 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGP---------- 223 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCG----------
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cch----------
Confidence 99999998888887654 555666666665555 455555555555555555555553 222
Q ss_pred EEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCC
Q 038019 238 LQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSL 317 (866)
Q Consensus 238 L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l 317 (866)
.+..+++|+.|+|++|.+.+.+|..++.+++|+.|+|++|.+.+.+|..+..+++|++|+|++|++
T Consensus 224 --------------~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~ 289 (328)
T 4fcg_A 224 --------------AIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVN 289 (328)
T ss_dssp --------------GGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTT
T ss_pred --------------hhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCc
Confidence 345566677777778888888999999999999999999999999999999999999999999999
Q ss_pred cccCCccc--CCCCCEEEeeCCCCC
Q 038019 318 SGTLPDQK--SENLQKIDLSHNHLS 340 (866)
Q Consensus 318 ~g~~p~~~--~~~L~~L~Ls~N~l~ 340 (866)
.+.+|... .++|+.+++..|.+.
T Consensus 290 ~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 290 LSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred hhhccHHHhhccCceEEeCCHHHHH
Confidence 99999865 488999999988765
No 47
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=4.7e-28 Score=267.62 Aligned_cols=258 Identities=18% Similarity=0.147 Sum_probs=223.9
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
..+++.|++++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|+++++|++|+
T Consensus 51 ~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 130 (353)
T 2z80_A 51 TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLN 130 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEE
T ss_pred cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEE
Confidence 34899999999999987777899999999999999999988888999999999999999999966556699999999999
Q ss_pred ccCCCCCCCCc-hhhcCCCCccEEEeecCC-CCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCC
Q 038019 144 FGTNNFSGALP-PELGNLAKLEQLYIDSCG-AGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSF 221 (866)
Q Consensus 144 Ls~N~l~~~~p-~~l~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 221 (866)
|++|+++...+ ..+..+++|++|++++|+ +....+..|.++++|++|++++|.+++..|..+.++++|++|++++|.+
T Consensus 131 L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 131 LLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp CTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred CCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 99999995544 478999999999999994 7777788999999999999999999988899999999999999999999
Q ss_pred CCCCchhhcCCCCCCEEEccCccCCCCCchh---hhcCCCCCceeccCccccc----CCCcccCCCCCcCEEeeecCcCc
Q 038019 222 QGPIPSSLSKLASLESLQMSDIYNVSSSLDF---VMSLKNLTDLSLRNALITG----TIPFGIGELQMLQILDLSFNNLT 294 (866)
Q Consensus 222 ~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~---~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 294 (866)
.......+..+++|+.|++++|.+....... ......++.++|+++.+++ .+|..+..+++|+.|+|++|+++
T Consensus 211 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (353)
T 2z80_A 211 ILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK 290 (353)
T ss_dssp TTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC
T ss_pred ccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC
Confidence 7544445567899999999999987654432 3346778889999988876 36778899999999999999999
Q ss_pred ccCCcc-cCCCCCCcEEECcCCCCcccCC
Q 038019 295 GQIPAT-LFNIDSLEYLFLGNNSLSGTLP 322 (866)
Q Consensus 295 ~~~p~~-l~~l~~L~~L~L~~N~l~g~~p 322 (866)
.+|.. +..+++|++|+|++|++++..|
T Consensus 291 -~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 291 -SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp -CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred -ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 45555 5899999999999999997654
No 48
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.2e-27 Score=253.92 Aligned_cols=254 Identities=20% Similarity=0.225 Sum_probs=185.3
Q ss_pred EEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCC
Q 038019 68 TKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTN 147 (866)
Q Consensus 68 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 147 (866)
+.++..+++++. +|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 567777777664 45433 468888899888888777777888888888888888888777888888888888888888
Q ss_pred C-CCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCc
Q 038019 148 N-FSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIP 226 (866)
Q Consensus 148 ~-l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 226 (866)
. ++...|..+..+++|++|+|++|.+++..|..|.++++|++|++++|++++..+..+..+++|++|+|++|.+++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 6 766667778888888888888888877777777777777777777777776666667777777777777777665444
Q ss_pred hhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCC
Q 038019 227 SSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDS 306 (866)
Q Consensus 227 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 306 (866)
..|.. +++|+.|+|++|.+++..|..+..+++|+.|++++|.+++..+..+..+++
T Consensus 171 ~~~~~------------------------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 171 RAFRG------------------------LHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp TTTTT------------------------CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred HHhcC------------------------ccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcc
Confidence 44444 445555566666666666777778888888888888888766667888888
Q ss_pred CcEEECcCCCCcccCCcc-cCCCCCEEEeeCCCCCCccCcccc
Q 038019 307 LEYLFLGNNSLSGTLPDQ-KSENLQKIDLSHNHLSGTFPLWVN 348 (866)
Q Consensus 307 L~~L~L~~N~l~g~~p~~-~~~~L~~L~Ls~N~l~g~~p~~~~ 348 (866)
|++|+|++|.++...+.. ....++.+..+.|.+.+..|..+.
T Consensus 227 L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 227 LQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp CCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGGGT
T ss_pred cCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCchHhC
Confidence 888888888887544332 123345555667777777776543
No 49
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=5.9e-27 Score=267.82 Aligned_cols=244 Identities=18% Similarity=0.143 Sum_probs=167.5
Q ss_pred EEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCC
Q 038019 69 KLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNN 148 (866)
Q Consensus 69 ~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 148 (866)
.++..+.+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 4555555555 3565554 688999999999998888889999999999999999988888889999999999999999
Q ss_pred CCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCC-cccccCCCCCCeEEccCCCCCCCCch
Q 038019 149 FSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKI-PDFIGNWTKLKSLRFQGNSFQGPIPS 227 (866)
Q Consensus 149 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p~ 227 (866)
++...+..|..+++|++|+|++|.++...+..|.++++|++|+|++|...+.+ +..|.++++|++|+|++|.+++. |
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~- 212 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P- 212 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-
Confidence 98777777888999999999999888777778888888999988884433343 44677888888888888888743 3
Q ss_pred hhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCC
Q 038019 228 SLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSL 307 (866)
Q Consensus 228 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 307 (866)
.+..+++|+.|+|++|.+.......+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..+..+..+++|
T Consensus 213 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 292 (452)
T 3zyi_A 213 NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYL 292 (452)
T ss_dssp CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTC
T ss_pred cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCC
Confidence 35555555555555555544444444444455555555554444444444444445555555554444444444444444
Q ss_pred cEEECcCCCC
Q 038019 308 EYLFLGNNSL 317 (866)
Q Consensus 308 ~~L~L~~N~l 317 (866)
+.|+|++|.+
T Consensus 293 ~~L~L~~Np~ 302 (452)
T 3zyi_A 293 VELHLHHNPW 302 (452)
T ss_dssp CEEECCSSCE
T ss_pred CEEEccCCCc
Confidence 4444444444
No 50
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.95 E-value=2e-26 Score=262.85 Aligned_cols=273 Identities=19% Similarity=0.141 Sum_probs=222.0
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
..+++.|++++|++++. | ++.+++|++|+|++|.+++. + ++++++|++|+|++|++++ +| ++.+++|++|+
T Consensus 63 l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~ 133 (457)
T 3bz5_A 63 LTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLN 133 (457)
T ss_dssp CTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEE
Confidence 35789999999999985 4 89999999999999999874 4 8999999999999999997 44 89999999999
Q ss_pred ccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCC
Q 038019 144 FGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQG 223 (866)
Q Consensus 144 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 223 (866)
+++|++++. .++.+++|++|++++|...+.+ .+..+++|++|++++|++++ +| +..+++|+.|++++|.+++
T Consensus 134 l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~ 205 (457)
T 3bz5_A 134 CARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITK 205 (457)
T ss_dssp CTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSC
T ss_pred CCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCe
Confidence 999999974 3889999999999999766666 47889999999999999997 44 7889999999999999987
Q ss_pred CCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCC-------CcCEEeeecCcCccc
Q 038019 224 PIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQ-------MLQILDLSFNNLTGQ 296 (866)
Q Consensus 224 ~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-------~L~~L~Ls~N~l~~~ 296 (866)
. .+..+++|+.|++++|.+...+ +..+++|+.|++++|.+++..+..+..++ +|+.|++++|.+.+.
T Consensus 206 ~---~l~~l~~L~~L~Ls~N~l~~ip---~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~ 279 (457)
T 3bz5_A 206 L---DLNQNIQLTFLDCSSNKLTEID---VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIY 279 (457)
T ss_dssp C---CCTTCTTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCE
T ss_pred e---ccccCCCCCEEECcCCcccccC---ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCc
Confidence 5 3888999999999999887743 77889999999999999986554454444 456666667766666
Q ss_pred CCcccCCCCCCcEEECcCCCCcccCCcc----------cCCCCCEEEeeCCCCCCccCccccccc-ccccccccccc
Q 038019 297 IPATLFNIDSLEYLFLGNNSLSGTLPDQ----------KSENLQKIDLSHNHLSGTFPLWVNSEL-QMNLAVNNFKF 362 (866)
Q Consensus 297 ~p~~l~~l~~L~~L~L~~N~l~g~~p~~----------~~~~L~~L~Ls~N~l~g~~p~~~~~~~-~l~l~~N~~~~ 362 (866)
+| +..+++|+.|+|++|.+.+.+|.. ..++|+.|++++|++++. +-.-...+ .|++++|.+++
T Consensus 280 ~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 280 FQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-DVSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp EE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-CCTTCTTCSEEECCSSCCCB
T ss_pred cc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-ccccCCcCcEEECCCCCCCC
Confidence 65 567889999999999877665532 236789999999999984 42212233 38999998875
No 51
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=9.2e-27 Score=265.27 Aligned_cols=244 Identities=19% Similarity=0.201 Sum_probs=171.7
Q ss_pred EEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCC
Q 038019 69 KLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNN 148 (866)
Q Consensus 69 ~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 148 (866)
.++..+.+++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|++|+
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 4555555555 4666554 688999999999998888889999999999999999988878889999999999999999
Q ss_pred CCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCC-cccccCCCCCCeEEccCCCCCCCCch
Q 038019 149 FSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKI-PDFIGNWTKLKSLRFQGNSFQGPIPS 227 (866)
Q Consensus 149 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p~ 227 (866)
++...+..|..+++|++|+|++|.++...+..|.++++|++|+|++|...+.+ +..|.++++|++|+|++|.++. +|
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~- 201 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP- 201 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-
Confidence 98777778888999999999999888877778888888888888885433333 4467788888888888888773 33
Q ss_pred hhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCC
Q 038019 228 SLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSL 307 (866)
Q Consensus 228 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 307 (866)
.+..+++| +.|+|++|.+++..|..|..+++|+.|+|++|++++..+..|..+++|
T Consensus 202 ~~~~l~~L------------------------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 257 (440)
T 3zyj_A 202 NLTPLIKL------------------------DELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 257 (440)
T ss_dssp CCTTCSSC------------------------CEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTC
T ss_pred ccCCCccc------------------------CEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCC
Confidence 24444444 445555555555455555555555555555555555555555555556
Q ss_pred cEEECcCCCCcccCCccc--CCCCCEEEeeCCCCCC
Q 038019 308 EYLFLGNNSLSGTLPDQK--SENLQKIDLSHNHLSG 341 (866)
Q Consensus 308 ~~L~L~~N~l~g~~p~~~--~~~L~~L~Ls~N~l~g 341 (866)
++|+|++|++++..+... .++|+.|+|++|++.+
T Consensus 258 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 258 VEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 666666665554333221 2455666666665544
No 52
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=1.5e-28 Score=266.57 Aligned_cols=248 Identities=18% Similarity=0.179 Sum_probs=167.1
Q ss_pred CCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcC-CCCCCcccc-------CCCCCCEeeccCCCCCCCCchhh
Q 038019 86 VTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDF-SGPVPRELG-------NLKELTVLAFGTNNFSGALPPEL 157 (866)
Q Consensus 86 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~~~p~~l~-------~l~~L~~L~Ls~N~l~~~~p~~l 157 (866)
+.+++|+.|++++|.+ .+|..+... |++|+|++|.+ ...+|..+. ++++|++|+|++|.+++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3445566667777766 456555433 66777777766 334555554 56777777777777776666665
Q ss_pred --cCCCCccEEEeecCCCCCCChhhhhcC-----cCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCC--Cchh
Q 038019 158 --GNLAKLEQLYIDSCGAGGEIPSTFAKL-----RNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGP--IPSS 228 (866)
Q Consensus 158 --~~l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~p~~ 228 (866)
+.+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+++++|++|+|++|++.+. .+..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 6677777777777777666 6666665 6777777777777766667777777777777777776654 2333
Q ss_pred h--cCCCCCCEEEccCccCCCC---CchhhhcCCCCCceeccCcccccCCC-cccCCCCCcCEEeeecCcCcccCCcccC
Q 038019 229 L--SKLASLESLQMSDIYNVSS---SLDFVMSLKNLTDLSLRNALITGTIP-FGIGELQMLQILDLSFNNLTGQIPATLF 302 (866)
Q Consensus 229 ~--~~l~~L~~L~l~~n~~~~~---~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 302 (866)
+ .++++|+.|++++|.+... ....+..+++|+.|+|++|.+++..| ..+..+++|+.|+|++|.++ .+|..+.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 3 6677777777777766522 12234567788888888888877664 34566788888888888887 6666665
Q ss_pred CCCCCcEEECcCCCCcccCCcccCCCCCEEEeeCCCCCC
Q 038019 303 NIDSLEYLFLGNNSLSGTLPDQKSENLQKIDLSHNHLSG 341 (866)
Q Consensus 303 ~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~Ls~N~l~g 341 (866)
++|++|+|++|++++.......++|+.|+|++|++++
T Consensus 274 --~~L~~L~Ls~N~l~~~p~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRNPSPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp --SEEEEEECCSSCCCSCCCTTTSCEEEEEECTTCTTTC
T ss_pred --CCceEEECCCCCCCCChhHhhCCCCCEEeccCCCCCC
Confidence 7788888888888866222234678888888888875
No 53
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.94 E-value=1e-26 Score=251.42 Aligned_cols=248 Identities=21% Similarity=0.192 Sum_probs=216.2
Q ss_pred CEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCC--CchhhcCCCCccEEEee
Q 038019 92 TVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGA--LPPELGNLAKLEQLYID 169 (866)
Q Consensus 92 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~p~~l~~l~~L~~L~L~ 169 (866)
+.++++++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++.. .+..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 57899999987 5666443 6899999999999965556689999999999999999843 36788889999999999
Q ss_pred cCCCCCCChhhhhcCcCCCEEEecCCCCCCCCc-ccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCC-
Q 038019 170 SCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIP-DFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVS- 247 (866)
Q Consensus 170 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~- 247 (866)
+|.++. +|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..+..|.++++|+.|++++|.+..
T Consensus 87 ~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 999874 66678999999999999999986655 678899999999999999998888999999999999999998765
Q ss_pred CCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCcccC-
Q 038019 248 SSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQKS- 326 (866)
Q Consensus 248 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~- 326 (866)
..+..+..+++|+.|+|++|.+++..|..+..+++|+.|+|++|.+++..+..+..+++|++|+|++|++++..|....
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 245 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 245 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHh
Confidence 4456788899999999999999988888999999999999999999988887899999999999999999988776442
Q ss_pred --CCCCEEEeeCCCCCCcc
Q 038019 327 --ENLQKIDLSHNHLSGTF 343 (866)
Q Consensus 327 --~~L~~L~Ls~N~l~g~~ 343 (866)
++|+.|+|++|++++..
T Consensus 246 ~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 246 FPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp CCTTCCEEECTTCCEECSG
T ss_pred hhccCCEEEccCCCeeccc
Confidence 48999999999998764
No 54
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.94 E-value=4e-26 Score=272.35 Aligned_cols=302 Identities=21% Similarity=0.160 Sum_probs=243.4
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
..+++.|+|++|++++..|..|.+|++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|+++++|++|+
T Consensus 75 l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 75 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 154 (635)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeec
Confidence 45899999999999998888999999999999999999987778899999999999999999988888899999999999
Q ss_pred ccCCCCCC-CCchhhcCCCCccEEEeecCCCCCCChhhhhcCcC------------------------------------
Q 038019 144 FGTNNFSG-ALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRN------------------------------------ 186 (866)
Q Consensus 144 Ls~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~------------------------------------ 186 (866)
|++|.++. .+|..++.+++|++|+|++|++++..+..|..+.+
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n 234 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 234 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcc
Confidence 99999976 46888999999999999999988766655443322
Q ss_pred --------------------------------------------------------------------------------
Q 038019 187 -------------------------------------------------------------------------------- 186 (866)
Q Consensus 187 -------------------------------------------------------------------------------- 186 (866)
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence
Q ss_pred ---------------CCEEEecCCCCCCCCc-------------------ccccCCCCCCeEEccCCCCCC---------
Q 038019 187 ---------------MQTLWASDNPFTGKIP-------------------DFIGNWTKLKSLRFQGNSFQG--------- 223 (866)
Q Consensus 187 ---------------L~~L~L~~N~l~~~~p-------------------~~l~~l~~L~~L~L~~N~l~~--------- 223 (866)
|+.|++.+|.+....+ .....+++|+.|+++.|.+..
T Consensus 315 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 394 (635)
T 4g8a_A 315 SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 394 (635)
T ss_dssp SCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHH
T ss_pred ccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchh
Confidence 1222222222111100 011134556666666665421
Q ss_pred ----------------------------------------C-CchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCce
Q 038019 224 ----------------------------------------P-IPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDL 262 (866)
Q Consensus 224 ----------------------------------------~-~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 262 (866)
. .+..|..+.+|+.++++.|.+.......+..++.|+.|
T Consensus 395 ~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L 474 (635)
T 4g8a_A 395 GTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 474 (635)
T ss_dssp SCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred hhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence 0 11345667888899999998887777788899999999
Q ss_pred eccCcccc-cCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCccc--CCCCCEEEeeCCCC
Q 038019 263 SLRNALIT-GTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQK--SENLQKIDLSHNHL 339 (866)
Q Consensus 263 ~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~--~~~L~~L~Ls~N~l 339 (866)
+|++|.+. +..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..+ .++|+.|+|++|+|
T Consensus 475 ~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l 554 (635)
T 4g8a_A 475 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 554 (635)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCC
T ss_pred hhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcC
Confidence 99999754 4578889999999999999999999999999999999999999999998777644 47999999999999
Q ss_pred CCccCccccc---ccc-ccccccccccccC
Q 038019 340 SGTFPLWVNS---ELQ-MNLAVNNFKFDIS 365 (866)
Q Consensus 340 ~g~~p~~~~~---~~~-l~l~~N~~~~~~~ 365 (866)
++..|..+.. .++ |+|++|+|.|++.
T Consensus 555 ~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 555 MTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999987753 334 9999999999854
No 55
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=3.8e-27 Score=252.16 Aligned_cols=238 Identities=18% Similarity=0.167 Sum_probs=203.2
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCc-CCCCCCccccCCCCCCEe
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHND-FSGPVPRELGNLKELTVL 142 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L 142 (866)
..+++.|++++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|. ++...|..|..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4589999999999999888899999999999999999998889999999999999999997 887778999999999999
Q ss_pred eccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCC
Q 038019 143 AFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQ 222 (866)
Q Consensus 143 ~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 222 (866)
+|++|.+++..|..+.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|.++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 99999999988999999999999999999999888888999999999999999999777777999999999999999999
Q ss_pred CCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccC
Q 038019 223 GPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLF 302 (866)
Q Consensus 223 ~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 302 (866)
+..|..|.++++|+.|++++|.+.......+..+++|+.|+|++|.+....+.. .-+..|+.+....+.+....|..+.
T Consensus 191 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGGT
T ss_pred ccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHhC
Confidence 888999999999999999888887766667777888888888888776543321 0112233444555666555555543
No 56
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=4.6e-26 Score=260.45 Aligned_cols=249 Identities=18% Similarity=0.156 Sum_probs=221.6
Q ss_pred CCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEee
Q 038019 90 YLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYID 169 (866)
Q Consensus 90 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 169 (866)
..+.++.+++.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 3567899998887 5776554 689999999999999889999999999999999999999888999999999999999
Q ss_pred cCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCC-CCCCCCchhhcCCCCCCEEEccCccCCCC
Q 038019 170 SCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGN-SFQGPIPSSLSKLASLESLQMSDIYNVSS 248 (866)
Q Consensus 170 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~n~~~~~ 248 (866)
+|+++...+..|..+++|++|+|++|+++...+..|.++++|+.|+|++| .+....+..|.++++|+.|++++|.+...
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 99999888888999999999999999999777778999999999999995 45444455789999999999999988754
Q ss_pred CchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCccc--C
Q 038019 249 SLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQK--S 326 (866)
Q Consensus 249 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~--~ 326 (866)
+.+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+... .
T Consensus 212 --~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 212 --PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp --CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred --ccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 457889999999999999999999999999999999999999999999999999999999999999996555432 4
Q ss_pred CCCCEEEeeCCCCCCcc
Q 038019 327 ENLQKIDLSHNHLSGTF 343 (866)
Q Consensus 327 ~~L~~L~Ls~N~l~g~~ 343 (866)
++|+.|+|++|++.+.-
T Consensus 290 ~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 290 RYLVELHLHHNPWNCDC 306 (452)
T ss_dssp TTCCEEECCSSCEECST
T ss_pred cCCCEEEccCCCcCCCC
Confidence 78999999999987653
No 57
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=4.5e-28 Score=262.84 Aligned_cols=245 Identities=19% Similarity=0.221 Sum_probs=211.1
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCC-CCCCcccc-------CCCCcCEEeccCCcCCCCCCccc--c
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFT-GPLPSFIG-------NLSRLMFLSFSHNDFSGPVPREL--G 134 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~-~~~p~~l~-------~l~~L~~L~Ls~N~l~~~~p~~l--~ 134 (866)
.+++.|++.+|.+ .+|..+... |+.|+|++|.++ ..+|..+. ++++|++|+|++|++++.+|..+ .
T Consensus 43 ~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 118 (312)
T 1wwl_A 43 RSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEA 118 (312)
T ss_dssp EECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSC
T ss_pred CCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHh
Confidence 3567778888888 788777655 999999999994 56777666 79999999999999999999887 8
Q ss_pred CCCCCCEeeccCCCCCCCCchhhcCC-----CCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCC--Ccccc--
Q 038019 135 NLKELTVLAFGTNNFSGALPPELGNL-----AKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGK--IPDFI-- 205 (866)
Q Consensus 135 ~l~~L~~L~Ls~N~l~~~~p~~l~~l-----~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~l-- 205 (866)
.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|..+++|++|+|++|++.+. ++..+
T Consensus 119 ~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 197 (312)
T 1wwl_A 119 TGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCP 197 (312)
T ss_dssp CSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCT
T ss_pred cCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHh
Confidence 999999999999999987 8888877 9999999999999999999999999999999999998765 34444
Q ss_pred cCCCCCCeEEccCCCCCCC--Cc-hhhcCCCCCCEEEccCccCCCCC-chhhhcCCCCCceeccCcccccCCCcccCCCC
Q 038019 206 GNWTKLKSLRFQGNSFQGP--IP-SSLSKLASLESLQMSDIYNVSSS-LDFVMSLKNLTDLSLRNALITGTIPFGIGELQ 281 (866)
Q Consensus 206 ~~l~~L~~L~L~~N~l~~~--~p-~~~~~l~~L~~L~l~~n~~~~~~-~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 281 (866)
..+++|++|+|++|.+++. ++ ..+.++++|+.|++++|.+.... ...+..+++|+.|+|++|.++ .+|..+. +
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~ 274 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--A 274 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--S
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--C
Confidence 8899999999999999842 22 44568899999999999988655 356677899999999999998 6777666 8
Q ss_pred CcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcc
Q 038019 282 MLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSG 319 (866)
Q Consensus 282 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g 319 (866)
+|+.|+|++|+|++. |. +..+++|++|+|++|++++
T Consensus 275 ~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 275 KLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 999999999999976 65 8899999999999999985
No 58
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=6.7e-26 Score=258.15 Aligned_cols=246 Identities=20% Similarity=0.237 Sum_probs=191.4
Q ss_pred CCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeec
Q 038019 91 LTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDS 170 (866)
Q Consensus 91 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 170 (866)
.+.++.+++.++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 457888888887 5676554 6788999999999887788888899999999999888877778888888888888888
Q ss_pred CCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCC-chhhcCCCCCCEEEccCccCCCCC
Q 038019 171 CGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPI-PSSLSKLASLESLQMSDIYNVSSS 249 (866)
Q Consensus 171 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~n~~~~~~ 249 (866)
|+++...+..|..+++|++|+|++|.++...+..|.++++|++|+|++|+..+.+ +..|.++
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l----------------- 184 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGL----------------- 184 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTC-----------------
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcc-----------------
Confidence 8888777777888888888888888877666667777777777777774333222 2344444
Q ss_pred chhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCccc--CC
Q 038019 250 LDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQK--SE 327 (866)
Q Consensus 250 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~--~~ 327 (866)
++|+.|+|++|.++. +| .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+ .+
T Consensus 185 -------~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 255 (440)
T 3zyj_A 185 -------SNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 255 (440)
T ss_dssp -------SSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT
T ss_pred -------cccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCC
Confidence 455555555555552 33 47788999999999999999999999999999999999999998776544 47
Q ss_pred CCCEEEeeCCCCCCccCccccc--cc-cccccccccccccC
Q 038019 328 NLQKIDLSHNHLSGTFPLWVNS--EL-QMNLAVNNFKFDIS 365 (866)
Q Consensus 328 ~L~~L~Ls~N~l~g~~p~~~~~--~~-~l~l~~N~~~~~~~ 365 (866)
+|+.|+|++|++++..+..+.. .+ .|+|++|.+.++..
T Consensus 256 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 256 SLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp TCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred CCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 9999999999999776665542 23 49999999998754
No 59
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.93 E-value=5.7e-26 Score=258.84 Aligned_cols=269 Identities=20% Similarity=0.202 Sum_probs=194.6
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCc-------------CEEeccCCcCCCCCC
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRL-------------MFLSFSHNDFSGPVP 130 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L-------------~~L~Ls~N~l~~~~p 130 (866)
..++++|++++|++ |.+|++|+++++|++|+|++|.+.|.+|..++++.+| ++|++++|.+++ +|
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 35789999999999 8999999999999999999999999999999998875 999999999985 44
Q ss_pred ccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCC
Q 038019 131 RELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTK 210 (866)
Q Consensus 131 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 210 (866)
.. .++|++|++++|.+++ +|.. +++|++|++++|++++. |.. .++|++|++++|++++ +| .++++++
T Consensus 88 ~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~ 154 (454)
T 1jl5_A 88 EL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSF 154 (454)
T ss_dssp SC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred CC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCC
Confidence 42 3789999999999987 5643 47899999999988763 211 2689999999999986 66 5888999
Q ss_pred CCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeec
Q 038019 211 LKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSF 290 (866)
Q Consensus 211 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 290 (866)
|++|++++|++++ +|.. ..+|+.|++++|.+.... .+..+++|+.|++++|.+++ +|.. .++|+.|++++
T Consensus 155 L~~L~l~~N~l~~-lp~~---~~~L~~L~L~~n~l~~l~--~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~ 224 (454)
T 1jl5_A 155 LKIIDVDNNSLKK-LPDL---PPSLEFIAAGNNQLEELP--ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGN 224 (454)
T ss_dssp CCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCS
T ss_pred CCEEECCCCcCcc-cCCC---cccccEEECcCCcCCcCc--cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcC
Confidence 9999999999885 5543 358899999998877643 57888999999999998886 4432 25889999999
Q ss_pred CcCcccCCcccCCCCCCcEEECcCCCCcccCCcccCCCCCEEEeeCCCCCCccCcccccccccccccccccc
Q 038019 291 NNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQKSENLQKIDLSHNHLSGTFPLWVNSELQMNLAVNNFKF 362 (866)
Q Consensus 291 N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~l~l~~N~~~~ 362 (866)
|.++ .+| .+..+++|++|++++|++++ +|. ..++|+.|++++|++++ +|........|++++|.+++
T Consensus 225 n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~-~~~~L~~L~l~~N~l~~-l~~~~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 225 NILE-ELP-ELQNLPFLTTIYADNNLLKT-LPD-LPPSLEALNVRDNYLTD-LPELPQSLTFLDVSENIFSG 291 (454)
T ss_dssp SCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCS-CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSE
T ss_pred CcCC-ccc-ccCCCCCCCEEECCCCcCCc-ccc-cccccCEEECCCCcccc-cCcccCcCCEEECcCCccCc
Confidence 9888 566 48888999999999999886 443 34789999999999887 66655444458888888875
No 60
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.93 E-value=8.4e-25 Score=249.20 Aligned_cols=262 Identities=24% Similarity=0.322 Sum_probs=130.0
Q ss_pred eEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeecc
Q 038019 66 HITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFG 145 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 145 (866)
+++.|++++|.+++ +|.. +++|++|++++|.+++ +|.. .++|++|+|++|++++ +| .|+++++|++|+++
T Consensus 92 ~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~ 161 (454)
T 1jl5_A 92 HLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVD 161 (454)
T ss_dssp TCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECC
Confidence 56666666666665 4432 2455555555555543 2211 1455555555555553 44 35555555555555
Q ss_pred CCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCC
Q 038019 146 TNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPI 225 (866)
Q Consensus 146 ~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 225 (866)
+|++++ +|..+ .+|++|++++|++++ +| .+.++++|++|++++|++++ +|... ++|++|++++|.++ .+
T Consensus 162 ~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~l 230 (454)
T 1jl5_A 162 NNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-EL 230 (454)
T ss_dssp SSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SC
T ss_pred CCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-cc
Confidence 555553 33222 355555555555554 33 35555555555555555553 22221 34555555555554 33
Q ss_pred chhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCccc-----------------CCCCCcCEEee
Q 038019 226 PSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGI-----------------GELQMLQILDL 288 (866)
Q Consensus 226 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~-----------------~~l~~L~~L~L 288 (866)
| .+..+++|+.|++++|.+..... .+++|+.|++++|.+++ +|..+ .-.++|+.|++
T Consensus 231 p-~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~N~l~~-l~~~~~~L~~L~ls~N~l~~l~~~~~~L~~L~l 304 (454)
T 1jl5_A 231 P-ELQNLPFLTTIYADNNLLKTLPD----LPPSLEALNVRDNYLTD-LPELPQSLTFLDVSENIFSGLSELPPNLYYLNA 304 (454)
T ss_dssp C-CCTTCTTCCEEECCSSCCSSCCS----CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSEESCCCTTCCEEEC
T ss_pred c-ccCCCCCCCEEECCCCcCCcccc----cccccCEEECCCCcccc-cCcccCcCCEEECcCCccCcccCcCCcCCEEEC
Confidence 3 24555555555555554432111 12344444444444433 22111 00123444444
Q ss_pred ecCcCcccCCcccCCC-CCCcEEECcCCCCcccCCcccCCCCCEEEeeCCCCCCccCcccccccccccccccccc
Q 038019 289 SFNNLTGQIPATLFNI-DSLEYLFLGNNSLSGTLPDQKSENLQKIDLSHNHLSGTFPLWVNSELQMNLAVNNFKF 362 (866)
Q Consensus 289 s~N~l~~~~p~~l~~l-~~L~~L~L~~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~~~~l~l~~N~~~~ 362 (866)
++|++++ +..+ ++|++|++++|++++ +|.. .++|+.|++++|++++ +|..+.....|++++|.+.+
T Consensus 305 ~~N~l~~-----i~~~~~~L~~L~Ls~N~l~~-lp~~-~~~L~~L~L~~N~l~~-lp~~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 305 SSNEIRS-----LCDLPPSLEELNVSNNKLIE-LPAL-PPRLERLIASFNHLAE-VPELPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CSSCCSE-----ECCCCTTCCEEECCSSCCSC-CCCC-CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSS
T ss_pred cCCcCCc-----ccCCcCcCCEEECCCCcccc-cccc-CCcCCEEECCCCcccc-ccchhhhccEEECCCCCCCc
Confidence 4444432 1122 467777777777775 4432 4677777777777773 55532222337777777765
No 61
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=3.3e-27 Score=256.69 Aligned_cols=245 Identities=18% Similarity=0.160 Sum_probs=157.8
Q ss_pred eEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeecc
Q 038019 66 HITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFG 145 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 145 (866)
+++.++++.+++...+...+..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+ |..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 34555666666655555556677788888888888887777888888888888888888876544 8888888888888
Q ss_pred CCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCC
Q 038019 146 TNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPI 225 (866)
Q Consensus 146 ~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 225 (866)
+|.+++. ...++|++|++++|++++..+. .+++|++|++++|++++..+..+..+++|++|+|++|.+++..
T Consensus 89 ~n~l~~l-----~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQEL-----LVGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEE-----EECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCccccc-----cCCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 8887643 2347888888888887765543 3567788888888887766667777777888888887777655
Q ss_pred chhhc-CCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCC
Q 038019 226 PSSLS-KLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNI 304 (866)
Q Consensus 226 p~~~~-~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 304 (866)
+..+. .+++|+.|++++|.+. +. + ....+++|+.|+|++|++++. |..+..+
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~------------------------~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l 213 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIY------------------------DV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSA 213 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCC------------------------EE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGG
T ss_pred HHHHhhccCcCCEEECCCCcCc------------------------cc-c-cccccccCCEEECCCCcCCcc-hhhhccc
Confidence 55543 5566666666655543 22 1 112245555555555555532 2235555
Q ss_pred CCCcEEECcCCCCcccCCccc--CCCCCEEEeeCCCCC-CccCcccc
Q 038019 305 DSLEYLFLGNNSLSGTLPDQK--SENLQKIDLSHNHLS-GTFPLWVN 348 (866)
Q Consensus 305 ~~L~~L~L~~N~l~g~~p~~~--~~~L~~L~Ls~N~l~-g~~p~~~~ 348 (866)
++|++|+|++|++++ +|... .++|+.|++++|+++ +.+|.++.
T Consensus 214 ~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 214 AGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp TTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred CcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 555555555555553 22221 245556666666655 44444443
No 62
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=4.2e-24 Score=226.55 Aligned_cols=212 Identities=19% Similarity=0.239 Sum_probs=161.2
Q ss_pred CCeeccccCCCCCeeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCC
Q 038019 51 PAIVCNCTFDNGATCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVP 130 (866)
Q Consensus 51 ~~v~C~~~~~~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 130 (866)
.|+.|.|.. +.+.+++++++++. +|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.++...+
T Consensus 8 ~~~~C~c~~------~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~ 78 (270)
T 2o6q_A 8 DGGVCSCNN------NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78 (270)
T ss_dssp GTCSBEEET------TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCT
T ss_pred CCCCCEeCC------CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeCh
Confidence 578888742 34678888888884 666554 578999999999987777788999999999999999986666
Q ss_pred ccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCC
Q 038019 131 RELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTK 210 (866)
Q Consensus 131 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 210 (866)
..|.++++|++|+|++|.+++..+..+..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+..|..+++
T Consensus 79 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 158 (270)
T 2o6q_A 79 GIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTS 158 (270)
T ss_dssp TTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcc
Confidence 67788999999999999988777777888888888888888888877777888888888888888888666666777888
Q ss_pred CCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeec
Q 038019 211 LKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSF 290 (866)
Q Consensus 211 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 290 (866)
|+.|+|++|.+++..+..|.++++|+.|++++ |.+++..+..+..+++|+.|+|++
T Consensus 159 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~------------------------N~l~~~~~~~~~~l~~L~~L~l~~ 214 (270)
T 2o6q_A 159 LKELRLYNNQLKRVPEGAFDKLTELKTLKLDN------------------------NQLKRVPEGAFDSLEKLKMLQLQE 214 (270)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCS------------------------SCCSCCCTTTTTTCTTCCEEECCS
T ss_pred cceeEecCCcCcEeChhHhccCCCcCEEECCC------------------------CcCCcCCHHHhccccCCCEEEecC
Confidence 88888888877766555566655555555554 444444444556666677777777
Q ss_pred CcCcc
Q 038019 291 NNLTG 295 (866)
Q Consensus 291 N~l~~ 295 (866)
|.+..
T Consensus 215 N~~~c 219 (270)
T 2o6q_A 215 NPWDC 219 (270)
T ss_dssp SCBCC
T ss_pred CCeeC
Confidence 76653
No 63
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.91 E-value=6.8e-26 Score=246.27 Aligned_cols=242 Identities=19% Similarity=0.117 Sum_probs=177.4
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++++|.+++..|..|.++++|++|+|++|.+++..+ +..+++|++|+|++|++++ +..+++|++|++
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~-----l~~~~~L~~L~l 106 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-----LLVGPSIETLHA 106 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEE-----EEECTTCCEEEC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccc-----ccCCCCcCEEEC
Confidence 479999999999999888999999999999999999987554 9999999999999999984 334489999999
Q ss_pred cCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccc-cCCCCCCeEEccCCCCCC
Q 038019 145 GTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFI-GNWTKLKSLRFQGNSFQG 223 (866)
Q Consensus 145 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~L~~N~l~~ 223 (866)
++|.+++..+. .+++|++|+|++|++++..+..+..+++|++|+|++|.+++..+..+ ..+++|++|+|++|.+++
T Consensus 107 ~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 183 (317)
T 3o53_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (317)
T ss_dssp CSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc
Confidence 99999876544 36889999999999999888899999999999999999998777776 478999999999999985
Q ss_pred CCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCC
Q 038019 224 PIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFN 303 (866)
Q Consensus 224 ~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 303 (866)
. + ....+++|+.|++++|.+... |..+..+++|+.|+|++|+++ .+|..+..
T Consensus 184 ~-~-~~~~l~~L~~L~Ls~N~l~~l-------------------------~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~ 235 (317)
T 3o53_A 184 V-K-GQVVFAKLKTLDLSSNKLAFM-------------------------GPEFQSAAGVTWISLRNNKLV-LIEKALRF 235 (317)
T ss_dssp E-E-CCCCCTTCCEEECCSSCCCEE-------------------------CGGGGGGTTCSEEECTTSCCC-EECTTCCC
T ss_pred c-c-cccccccCCEEECCCCcCCcc-------------------------hhhhcccCcccEEECcCCccc-chhhHhhc
Confidence 4 2 222355566665555544432 222444555555555555555 34444555
Q ss_pred CCCCcEEECcCCCCc-ccCCccc--CCCCCEEEee-CCCCCCccC
Q 038019 304 IDSLEYLFLGNNSLS-GTLPDQK--SENLQKIDLS-HNHLSGTFP 344 (866)
Q Consensus 304 l~~L~~L~L~~N~l~-g~~p~~~--~~~L~~L~Ls-~N~l~g~~p 344 (866)
+++|+.|+|++|+++ +.+|... .+.|+.|+++ .+.++|..|
T Consensus 236 l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp CTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred CCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 555555555555555 3222211 2345555555 233444433
No 64
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.91 E-value=2.2e-25 Score=256.56 Aligned_cols=232 Identities=18% Similarity=0.153 Sum_probs=161.5
Q ss_pred CCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEee
Q 038019 90 YLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYID 169 (866)
Q Consensus 90 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 169 (866)
+|++|+|++|.+++..|..|+++++|++|+|++|.+++..| |..+++|++|+|++|.+++.. ..++|++|+|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEECc
Confidence 67777777777776666677777777777777777765444 677777777777777766332 23677777777
Q ss_pred cCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhc-CCCCCCEEEccCccCCCC
Q 038019 170 SCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLS-KLASLESLQMSDIYNVSS 248 (866)
Q Consensus 170 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~~n~~~~~ 248 (866)
+|.+++..+. .+++|+.|+|++|.+++..|..++++++|+.|+|++|.+++.+|..+. .+++|+.|+|++|.+...
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 7777665543 346677777777777766666777777777777777777766666665 677777777777766533
Q ss_pred CchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCc-ccCCccc--
Q 038019 249 SLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLS-GTLPDQK-- 325 (866)
Q Consensus 249 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-g~~p~~~-- 325 (866)
+....+++|+.|+|++|.+++..| .+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+. +.+|...
T Consensus 185 --~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 --KGQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp --ECCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred --cccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 223357788888888888886544 47788888888888888885 6777888888888888888887 4444322
Q ss_pred CCCCCEEEee
Q 038019 326 SENLQKIDLS 335 (866)
Q Consensus 326 ~~~L~~L~Ls 335 (866)
.+.|+.++++
T Consensus 261 l~~L~~l~~~ 270 (487)
T 3oja_A 261 NQRVQTVAKQ 270 (487)
T ss_dssp CHHHHHHHHH
T ss_pred CCCCcEEecc
Confidence 2456666665
No 65
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.91 E-value=5.5e-25 Score=253.15 Aligned_cols=224 Identities=20% Similarity=0.177 Sum_probs=191.8
Q ss_pred CCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEE
Q 038019 111 NLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTL 190 (866)
Q Consensus 111 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 190 (866)
.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| ++.+++|++|+|++|.+++.. ..++|++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEE
Confidence 34589999999999999888999999999999999999987665 999999999999999987643 34899999
Q ss_pred EecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhh-cCCCCCceeccCccc
Q 038019 191 WASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVM-SLKNLTDLSLRNALI 269 (866)
Q Consensus 191 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~-~l~~L~~L~L~~n~l 269 (866)
++++|.+++..+. .+++|+.|+|++|.+++..|..|.++++|+.|+|++|.+....+..+. .+++|+.|+|++|.+
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 9999999976554 457899999999999998898999999999999999998876666665 799999999999999
Q ss_pred ccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCccc--CCCCCEEEeeCCCCC-CccCcc
Q 038019 270 TGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQK--SENLQKIDLSHNHLS-GTFPLW 346 (866)
Q Consensus 270 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~--~~~L~~L~Ls~N~l~-g~~p~~ 346 (866)
++..+ +..+++|+.|+|++|.+++..| .+..+++|+.|+|++|.+++ +|... .++|+.|++++|+++ +.+|.+
T Consensus 182 ~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~ 257 (487)
T 3oja_A 182 YDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (487)
T ss_dssp CEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHH
T ss_pred ccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHH
Confidence 87633 4468999999999999997544 58899999999999999997 44433 478999999999998 556665
Q ss_pred cc
Q 038019 347 VN 348 (866)
Q Consensus 347 ~~ 348 (866)
+.
T Consensus 258 ~~ 259 (487)
T 3oja_A 258 FS 259 (487)
T ss_dssp HT
T ss_pred HH
Confidence 54
No 66
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=1e-23 Score=224.29 Aligned_cols=225 Identities=19% Similarity=0.181 Sum_probs=153.0
Q ss_pred EEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCC
Q 038019 71 RVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFS 150 (866)
Q Consensus 71 ~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 150 (866)
+..+.+++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.++
T Consensus 13 ~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (276)
T 2z62_A 13 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (276)
T ss_dssp ECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC
Confidence 33343433 3555553 47889999999988777778888889999999999888777778888888888888888888
Q ss_pred CCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCC-CcccccCCCCCCeEEccCCCCCCCCchhh
Q 038019 151 GALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGK-IPDFIGNWTKLKSLRFQGNSFQGPIPSSL 229 (866)
Q Consensus 151 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 229 (866)
+..+..|.++++|++|++++|.+++..+..+..+++|++|++++|.+++. +|..+.++++|++|+|++|++++..+..+
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 169 (276)
T 2z62_A 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (276)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHh
Confidence 77777788888888888888888776666677777777777777777653 46777777777777777777765555444
Q ss_pred cCCCCCCEEEccCccCCCCCchhhhcCCCCC-ceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCc
Q 038019 230 SKLASLESLQMSDIYNVSSSLDFVMSLKNLT-DLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLE 308 (866)
Q Consensus 230 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~-~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 308 (866)
..+++|+ .|. .|++++|.+++..+..+. ..+|+.|+|++|++++..+..+..+++|+
T Consensus 170 ~~l~~L~---------------------~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 227 (276)
T 2z62_A 170 RVLHQMP---------------------LLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQ 227 (276)
T ss_dssp HHHHTCT---------------------TCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCC
T ss_pred hhhhhcc---------------------ccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhccccccc
Confidence 4433332 121 455556655544333332 23566666666666655444555566666
Q ss_pred EEECcCCCCccc
Q 038019 309 YLFLGNNSLSGT 320 (866)
Q Consensus 309 ~L~L~~N~l~g~ 320 (866)
.|+|++|++++.
T Consensus 228 ~L~l~~N~~~c~ 239 (276)
T 2z62_A 228 KIWLHTNPWDCS 239 (276)
T ss_dssp EEECCSSCBCCC
T ss_pred EEEccCCccccc
Confidence 666666655543
No 67
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.91 E-value=9.4e-24 Score=247.98 Aligned_cols=256 Identities=25% Similarity=0.238 Sum_probs=210.8
Q ss_pred eEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeecc
Q 038019 66 HITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFG 145 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 145 (866)
+++.|++++|+++ .+|..+. ++|++|+|++|.|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 4889999999998 7787776 79999999999998 4665 6789999999999998 4665 77999999999
Q ss_pred CCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCC
Q 038019 146 TNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPI 225 (866)
Q Consensus 146 ~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 225 (866)
+|++++. |. .+++|+.|+|++|+++. +|. .+++|++|+|++|++++ +|. .+++|+.|++++|.+++ +
T Consensus 110 ~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l 176 (622)
T 3g06_A 110 SNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-L 176 (622)
T ss_dssp SCCCCCC-CC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCCC-CC---CCCCcCEEECCCCCCCc-CCC---CCCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-C
Confidence 9999864 44 67899999999999987 444 35899999999999985 454 34689999999999996 5
Q ss_pred chhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCC
Q 038019 226 PSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNID 305 (866)
Q Consensus 226 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 305 (866)
| ..+++|+.|++++|.+..... .+++|+.|++++|.++. +|. .+++|+.|+|++|.|++ +| ..++
T Consensus 177 ~---~~~~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~ 241 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQLASLPT----LPSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP---VLPS 241 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC---CCCT
T ss_pred c---ccCCCCcEEECCCCCCCCCCC----ccchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CC---CCCC
Confidence 5 557899999999998875332 35789999999999984 443 34889999999999986 55 4568
Q ss_pred CCcEEECcCCCCcccCCcccCCCCCEEEeeCCCCCCccCcccccc--c-cccccccccccc
Q 038019 306 SLEYLFLGNNSLSGTLPDQKSENLQKIDLSHNHLSGTFPLWVNSE--L-QMNLAVNNFKFD 363 (866)
Q Consensus 306 ~L~~L~L~~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~~~--~-~l~l~~N~~~~~ 363 (866)
+|+.|+|++|+++. +|. ..++|+.|+|++|+|+ .+|..+... + .|+|++|++++.
T Consensus 242 ~L~~L~Ls~N~L~~-lp~-~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~ 299 (622)
T 3g06_A 242 ELKELMVSGNRLTS-LPM-LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSER 299 (622)
T ss_dssp TCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHH
T ss_pred cCcEEECCCCCCCc-CCc-ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCc
Confidence 99999999999994 555 6689999999999999 778766532 3 389999998764
No 68
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=6.1e-24 Score=226.04 Aligned_cols=208 Identities=17% Similarity=0.125 Sum_probs=175.1
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
..+++.|++++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|.++++|++|+
T Consensus 27 ~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 34699999999999988888999999999999999999988888899999999999999999988889999999999999
Q ss_pred ccCCCCCCCCchhhcCCCCccEEEeecCCCCCC-ChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCC----eEEccC
Q 038019 144 FGTNNFSGALPPELGNLAKLEQLYIDSCGAGGE-IPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLK----SLRFQG 218 (866)
Q Consensus 144 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~L~~ 218 (866)
+++|.+++..+..++.+++|++|+|++|.+++. +|..|..+++|++|+|++|++++..+..+..+++|+ .|++++
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~ 186 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCS
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCC
Confidence 999999988777899999999999999999884 699999999999999999999987777787777776 788999
Q ss_pred CCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCccc
Q 038019 219 NSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQ 296 (866)
Q Consensus 219 N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 296 (866)
|.+++..+..+.. . +|+.|+|++|.+++..+..+..+++|+.|+|++|.+.+.
T Consensus 187 n~l~~~~~~~~~~-~------------------------~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 187 NPMNFIQPGAFKE-I------------------------RLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp SCCCEECTTSSCS-C------------------------CEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred CcccccCccccCC-C------------------------cccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 9888554433332 2 445555566666655555566777777777777777643
No 69
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=2.1e-22 Score=213.48 Aligned_cols=205 Identities=21% Similarity=0.237 Sum_probs=162.5
Q ss_pred CCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEee
Q 038019 90 YLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYID 169 (866)
Q Consensus 90 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 169 (866)
.++.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++...+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4678999999988 4666554 678999999999987777788889999999999998886666667888888888888
Q ss_pred cCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCC
Q 038019 170 SCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSS 249 (866)
Q Consensus 170 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~ 249 (866)
+|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|..+
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l----------------- 156 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKL----------------- 156 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC-----------------
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCC-----------------
Confidence 888887777777788888888888888877666677777777777777777775544444444
Q ss_pred chhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccC
Q 038019 250 LDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTL 321 (866)
Q Consensus 250 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~ 321 (866)
++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+....
T Consensus 157 -------~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 157 -------TSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp -------TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred -------cccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 45555566666666666667888999999999999999877778899999999999999987543
No 70
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.90 E-value=3.8e-26 Score=261.82 Aligned_cols=299 Identities=16% Similarity=0.107 Sum_probs=210.8
Q ss_pred eeEEEEEEcccCcCCCCCccc-CCCC----CCCEEEccCCCCCC----CCCccccCCCCcCEEeccCCcCCCCCCccc--
Q 038019 65 CHITKLRVYGLNKKGVIPEEL-VTLQ----YLTVLKIDQNFFTG----PLPSFIGNLSRLMFLSFSHNDFSGPVPREL-- 133 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l-~~l~----~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l-- 133 (866)
.++++|++++|.++...+..+ ..+. +|++|+|++|.++. .++..+.++++|++|+|++|.+++..+..+
T Consensus 56 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 135 (461)
T 1z7x_W 56 PALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 135 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHH
Confidence 368888888888776544333 2344 68888888888874 457778888888888888888865434333
Q ss_pred ---cCCCCCCEeeccCCCCCCCC----chhhcCCCCccEEEeecCCCCCCChhhhh-----cCcCCCEEEecCCCCCCC-
Q 038019 134 ---GNLKELTVLAFGTNNFSGAL----PPELGNLAKLEQLYIDSCGAGGEIPSTFA-----KLRNMQTLWASDNPFTGK- 200 (866)
Q Consensus 134 ---~~l~~L~~L~Ls~N~l~~~~----p~~l~~l~~L~~L~L~~n~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~- 200 (866)
..+++|++|+|++|.+++.. +..+..+++|++|+|++|.++...+..+. .+++|++|++++|.+++.
T Consensus 136 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 215 (461)
T 1z7x_W 136 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN 215 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTH
T ss_pred HHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHH
Confidence 23567888888888887643 55667778888888888887665444443 256888888888888764
Q ss_pred ---CcccccCCCCCCeEEccCCCCCCCC-----chhhcCCCCCCEEEccCccCCCCC----chhhhcCCCCCceeccCcc
Q 038019 201 ---IPDFIGNWTKLKSLRFQGNSFQGPI-----PSSLSKLASLESLQMSDIYNVSSS----LDFVMSLKNLTDLSLRNAL 268 (866)
Q Consensus 201 ---~p~~l~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~l~~n~~~~~~----~~~~~~l~~L~~L~L~~n~ 268 (866)
++..+..+++|++|+|++|.+.... +..+..+++|+.|++++|.+.... ...+..+++|++|+|++|.
T Consensus 216 ~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 295 (461)
T 1z7x_W 216 CRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNE 295 (461)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCC
T ss_pred HHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCC
Confidence 5667777888888888888876432 223335788888888888776432 3345668888888888888
Q ss_pred cccCCCcccC-----CCCCcCEEeeecCcCccc----CCcccCCCCCCcEEECcCCCCcccCCccc-------CCCCCEE
Q 038019 269 ITGTIPFGIG-----ELQMLQILDLSFNNLTGQ----IPATLFNIDSLEYLFLGNNSLSGTLPDQK-------SENLQKI 332 (866)
Q Consensus 269 l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~g~~p~~~-------~~~L~~L 332 (866)
+++..+..+. ..++|+.|++++|.+++. ++..+..+++|++|+|++|.+++..+... .++|+.|
T Consensus 296 i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L 375 (461)
T 1z7x_W 296 LGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVL 375 (461)
T ss_dssp CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEE
T ss_pred CchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEE
Confidence 8754333222 236888888888888765 45666677888888888888875432211 3578888
Q ss_pred EeeCCCCCC----ccCcccc--ccc-cccccccccccc
Q 038019 333 DLSHNHLSG----TFPLWVN--SEL-QMNLAVNNFKFD 363 (866)
Q Consensus 333 ~Ls~N~l~g----~~p~~~~--~~~-~l~l~~N~~~~~ 363 (866)
+|++|++++ .+|..+. ..+ .|++++|+++..
T Consensus 376 ~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 376 WLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp ECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred ECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 888888886 5666543 223 388888887643
No 71
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=8.5e-23 Score=216.68 Aligned_cols=209 Identities=18% Similarity=0.167 Sum_probs=111.9
Q ss_pred CCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccE
Q 038019 86 VTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQ 165 (866)
Q Consensus 86 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 165 (866)
..+++|+.|++++|.++. + ..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++..+..+.++++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 113 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKE 113 (272)
T ss_dssp HHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred ccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCE
Confidence 344555555555555542 2 2245555555555555555431 24555555555555555555444444555555555
Q ss_pred EEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccC
Q 038019 166 LYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYN 245 (866)
Q Consensus 166 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~ 245 (866)
|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++++..+..|..+++|+.|++++|.+
T Consensus 114 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 193 (272)
T 3rfs_A 114 LVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcC
Confidence 55555555555555555555555555555555544444455555555555555555544444455555555555555555
Q ss_pred CCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCC
Q 038019 246 VSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNID 305 (866)
Q Consensus 246 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 305 (866)
.......+..+++|+.|+|++|.+.+. +++|+.|+++.|.++|.+|..++.++
T Consensus 194 ~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 194 KSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred CccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccC
Confidence 544444455555566666666655432 33566666666666666666665544
No 72
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=4.2e-23 Score=218.99 Aligned_cols=221 Identities=20% Similarity=0.189 Sum_probs=146.1
Q ss_pred CCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeec
Q 038019 91 LTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDS 170 (866)
Q Consensus 91 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 170 (866)
+..+++..+.+... ..+..+++|+.|++++|.++. + ..+..+++|++|+|++|.+++. ..+..+++|++|+|++
T Consensus 21 l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~ 94 (272)
T 3rfs_A 21 TIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTG 94 (272)
T ss_dssp HHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTT
T ss_pred HHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCC
Confidence 34455555555432 234566677777777776652 2 3466677777777777777652 3666777777777777
Q ss_pred CCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCc
Q 038019 171 CGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSL 250 (866)
Q Consensus 171 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 250 (866)
|.+++..+..|.++++|++|+|++|++++..+..+.++++|++|+|++|.+++..+..|.++++|+.|++++|.+.....
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 174 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCH
Confidence 77776666666777777777777777776666666677777777777777776666666677777777777776665555
Q ss_pred hhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCcc
Q 038019 251 DFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQ 324 (866)
Q Consensus 251 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~ 324 (866)
..+..+++|+.|+|++|.+++..+..+..+++|+.|++++|.+.+. +++|+.|+++.|.++|.+|..
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 175 GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred HHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 5566677777777777777766666667777777777777766533 445666777777777766654
No 73
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.89 E-value=5.1e-26 Score=260.78 Aligned_cols=277 Identities=17% Similarity=0.152 Sum_probs=134.5
Q ss_pred eEEEEEEcccCcCCCCCcc-cCCCCCCCEEEccCCCCCC----CCCccccCCCCcCEEeccCCcCCCCCCccc-cCCC--
Q 038019 66 HITKLRVYGLNKKGVIPEE-LVTLQYLTVLKIDQNFFTG----PLPSFIGNLSRLMFLSFSHNDFSGPVPREL-GNLK-- 137 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~p~~-l~~l~~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~-- 137 (866)
++++|++++++++...... +..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 4555666555554432222 4455556666666655543 234445555556666666655543222222 1233
Q ss_pred --CCCEeeccCCCCCC----CCchhhcCCCCccEEEeecCCCCCCChhhhhc-----CcCCCEEEecCCCCCCC----Cc
Q 038019 138 --ELTVLAFGTNNFSG----ALPPELGNLAKLEQLYIDSCGAGGEIPSTFAK-----LRNMQTLWASDNPFTGK----IP 202 (866)
Q Consensus 138 --~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~----~p 202 (866)
+|++|+|++|.++. .++..+..+++|++|+|++|.++...+..+.. +++|++|+|++|.+++. ++
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 45566666655552 33555555556666666555554433332221 33455666665555542 23
Q ss_pred ccccCCCCCCeEEccCCCCCCCCchhhc-----CCCCCCEEEccCccCCCCC----chhhhcCCCCCceeccCcccccCC
Q 038019 203 DFIGNWTKLKSLRFQGNSFQGPIPSSLS-----KLASLESLQMSDIYNVSSS----LDFVMSLKNLTDLSLRNALITGTI 273 (866)
Q Consensus 203 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~l~~n~~~~~~----~~~~~~l~~L~~L~L~~n~l~~~~ 273 (866)
..+..+++|++|+|++|.+....+..+. .+++|+.|++++|.+.... ...+..+++|+.|+|++|.+++..
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 243 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHH
Confidence 3444455556666655555433222222 2345555555555544322 223444555555555555554321
Q ss_pred -----CcccCCCCCcCEEeeecCcCccc----CCcccCCCCCCcEEECcCCCCcccCCcc-------cCCCCCEEEeeCC
Q 038019 274 -----PFGIGELQMLQILDLSFNNLTGQ----IPATLFNIDSLEYLFLGNNSLSGTLPDQ-------KSENLQKIDLSHN 337 (866)
Q Consensus 274 -----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~g~~p~~-------~~~~L~~L~Ls~N 337 (866)
+..+..+++|+.|++++|.+++. ++..+..+++|++|+|++|.+++..+.. ..++|+.|++++|
T Consensus 244 ~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 323 (461)
T 1z7x_W 244 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSC 323 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCC
Confidence 11222355555555555555542 3444444555555555555554321111 0135555555555
Q ss_pred CCCCc
Q 038019 338 HLSGT 342 (866)
Q Consensus 338 ~l~g~ 342 (866)
.+++.
T Consensus 324 ~l~~~ 328 (461)
T 1z7x_W 324 SFTAA 328 (461)
T ss_dssp CCBGG
T ss_pred CCchH
Confidence 55544
No 74
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.89 E-value=8.2e-22 Score=231.51 Aligned_cols=243 Identities=24% Similarity=0.248 Sum_probs=202.9
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
.+++.|++++|+++. +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|.+++ +|. .+++|++|+|
T Consensus 61 ~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L 128 (622)
T 3g06_A 61 AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWI 128 (622)
T ss_dssp TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEEC
T ss_pred CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEEC
Confidence 579999999999984 665 57899999999999984 665 78999999999999985 454 6789999999
Q ss_pred cCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCC
Q 038019 145 GTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGP 224 (866)
Q Consensus 145 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 224 (866)
++|+++. +|.. +++|++|+|++|.+++. |. .+.+|+.|++++|.+++ +| ..+++|+.|+|++|.+++
T Consensus 129 ~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~- 195 (622)
T 3g06_A 129 FGNQLTS-LPVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS- 195 (622)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-
T ss_pred CCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-
Confidence 9999985 5543 58999999999999864 43 35789999999999995 55 457899999999999996
Q ss_pred CchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCC
Q 038019 225 IPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNI 304 (866)
Q Consensus 225 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 304 (866)
+|. .+++|+.|++++|.+..... .+++|+.|+|++|.+++ +| ..+++|+.|+|++|.|+ .+|. .+
T Consensus 196 l~~---~~~~L~~L~L~~N~l~~l~~----~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~ 260 (622)
T 3g06_A 196 LPT---LPSELYKLWAYNNRLTSLPA----LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LP 260 (622)
T ss_dssp CCC---CCTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CC
T ss_pred CCC---ccchhhEEECcCCcccccCC----CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---cc
Confidence 443 35789999999998875432 35889999999999986 45 45689999999999998 4555 67
Q ss_pred CCCcEEECcCCCCcccCCccc--CCCCCEEEeeCCCCCCccCcccc
Q 038019 305 DSLEYLFLGNNSLSGTLPDQK--SENLQKIDLSHNHLSGTFPLWVN 348 (866)
Q Consensus 305 ~~L~~L~L~~N~l~g~~p~~~--~~~L~~L~Ls~N~l~g~~p~~~~ 348 (866)
++|+.|+|++|+++ .+|... .++|+.|+|++|++++.+|..+.
T Consensus 261 ~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 261 SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred ccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 89999999999999 667643 48999999999999998887654
No 75
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.88 E-value=3.4e-22 Score=213.87 Aligned_cols=204 Identities=23% Similarity=0.196 Sum_probs=121.9
Q ss_pred cCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCcc
Q 038019 85 LVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLE 164 (866)
Q Consensus 85 l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 164 (866)
+.++++|++|++++|.++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+ .+.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 455666666666666665 3444332 466666666666665556666666666666666666654322 14555566
Q ss_pred EEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCcc
Q 038019 165 QLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIY 244 (866)
Q Consensus 165 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~ 244 (866)
+|+|++|+++ .+|..+..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------------ 147 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPT------------ 147 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTC------------
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccc------------
Confidence 6666655554 344445555555555555555555444555555555555555555554444334444
Q ss_pred CCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcc
Q 038019 245 NVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSG 319 (866)
Q Consensus 245 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g 319 (866)
++|+.|+|++|.++...+..|..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.+..
T Consensus 148 ------------~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 148 ------------PKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp ------------TTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred ------------cCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 44444455555555444445566777777777777776 566677777788888888888764
No 76
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.88 E-value=4.9e-22 Score=212.64 Aligned_cols=204 Identities=22% Similarity=0.195 Sum_probs=148.6
Q ss_pred cccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCC
Q 038019 108 FIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNM 187 (866)
Q Consensus 108 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 187 (866)
.+.++++|++|++++|+++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+. ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 3567778888888888877 4555553 5777777777777766667777777777777777776654332 556666
Q ss_pred CEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCc
Q 038019 188 QTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNA 267 (866)
Q Consensus 188 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 267 (866)
++|+|++|+++ .+|..+..+++|++|+|++|++++..+.. +..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~------------------------~~~l~~L~~L~L~~N 134 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGA------------------------LRGLGELQELYLKGN 134 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSST------------------------TTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHH------------------------HcCCCCCCEEECCCC
Confidence 66666666665 45555566666666666666665444444 444556666667777
Q ss_pred ccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCcccC--CCCCEEEeeCCCCCCc
Q 038019 268 LITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQKS--ENLQKIDLSHNHLSGT 342 (866)
Q Consensus 268 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~--~~L~~L~Ls~N~l~g~ 342 (866)
.+++..+..|..+++|+.|+|++|+++...+..+..+++|++|+|++|+++ .+|.... ..|+.|+|++|++.+.
T Consensus 135 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 135 ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 777666677889999999999999999777777888999999999999999 5565443 6799999999999865
No 77
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=1.1e-23 Score=233.19 Aligned_cols=249 Identities=18% Similarity=0.147 Sum_probs=162.5
Q ss_pred EEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCC----ccccCCC-CcCEEeccCCcCCCCCCccccCC-----CCC
Q 038019 70 LRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLP----SFIGNLS-RLMFLSFSHNDFSGPVPRELGNL-----KEL 139 (866)
Q Consensus 70 L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p----~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l-----~~L 139 (866)
++++.|++++.+|..+...++|++|||++|.+++..+ ..|.+++ +|++|+|++|.+++..+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 5677788888888777777778888888888887666 6677787 88888888888887777766664 888
Q ss_pred CEeeccCCCCCCCCchhhcC----C-CCccEEEeecCCCCCCChhhhhc-----CcCCCEEEecCCCCCCCC----cccc
Q 038019 140 TVLAFGTNNFSGALPPELGN----L-AKLEQLYIDSCGAGGEIPSTFAK-----LRNMQTLWASDNPFTGKI----PDFI 205 (866)
Q Consensus 140 ~~L~Ls~N~l~~~~p~~l~~----l-~~L~~L~L~~n~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~----p~~l 205 (866)
++|+|++|.+++..+..+.. + ++|++|+|++|.+++..+..+.. .++|++|+|++|.+++.. +..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 88888888888766664443 3 78888888888887776655443 257888888888877543 3334
Q ss_pred cCCC-CCCeEEccCCCCCCCCchhh----cCC-CCCCEEEccCccCCCCCch----hhhc-CCCCCceeccCcccccCCC
Q 038019 206 GNWT-KLKSLRFQGNSFQGPIPSSL----SKL-ASLESLQMSDIYNVSSSLD----FVMS-LKNLTDLSLRNALITGTIP 274 (866)
Q Consensus 206 ~~l~-~L~~L~L~~N~l~~~~p~~~----~~l-~~L~~L~l~~n~~~~~~~~----~~~~-l~~L~~L~L~~n~l~~~~p 274 (866)
..++ +|++|+|++|.+++..+..+ ..+ ++|+.|+|++|.+...... .+.. .++|+.|+|++|.+++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 4554 78888888888876655433 334 4777777777766543332 2222 3466666666666655432
Q ss_pred ----cccCCCCCcCEEeeecCcCccc-------CCcccCCCCCCcEEECcCCCCc
Q 038019 275 ----FGIGELQMLQILDLSFNNLTGQ-------IPATLFNIDSLEYLFLGNNSLS 318 (866)
Q Consensus 275 ----~~~~~l~~L~~L~Ls~N~l~~~-------~p~~l~~l~~L~~L~L~~N~l~ 318 (866)
..+..+++|+.|+|++|.+.+. ++..+..+++|+.|++++|++.
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCC
T ss_pred HHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCC
Confidence 2334555666666666653322 1223344444444444444444
No 78
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=8e-24 Score=231.86 Aligned_cols=253 Identities=18% Similarity=0.204 Sum_probs=157.6
Q ss_pred EEEEEEcccCcCCCCCcccCCC--CCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCC-CCccccCCCCCCEee
Q 038019 67 ITKLRVYGLNKKGVIPEELVTL--QYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGP-VPRELGNLKELTVLA 143 (866)
Q Consensus 67 v~~L~l~~~~l~~~~p~~l~~l--~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~ 143 (866)
++.|+++++.+. +..+..+ ++|+.|++++|.+.+..+. +.++++|++|+|++|.+++. +|..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 456777766655 4445555 6777777777777665544 45677777777777776654 566666777777777
Q ss_pred ccCCCCCCCCchhhcCCCCccEEEeecC-CCCCC-ChhhhhcCcCCCEEEecCC-CCCCC-CcccccCCC-CCCeEEccC
Q 038019 144 FGTNNFSGALPPELGNLAKLEQLYIDSC-GAGGE-IPSTFAKLRNMQTLWASDN-PFTGK-IPDFIGNWT-KLKSLRFQG 218 (866)
Q Consensus 144 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~-~L~~L~L~~ 218 (866)
|++|.+++..+..++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+++. ++..+..++ +|++|+|++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 7777766666666666777777777666 45542 4555666666666666666 66543 445555566 666666666
Q ss_pred C--CCC-CCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcc-cccCCCcccCCCCCcCEEeeecCc-C
Q 038019 219 N--SFQ-GPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNAL-ITGTIPFGIGELQMLQILDLSFNN-L 293 (866)
Q Consensus 219 N--~l~-~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~Ls~N~-l 293 (866)
| .++ +.++..+ ..+++|+.|++++|. +++..+..+..+++|+.|++++|. +
T Consensus 205 ~~~~~~~~~l~~~~------------------------~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~ 260 (336)
T 2ast_B 205 YRKNLQKSDLSTLV------------------------RRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDI 260 (336)
T ss_dssp CGGGSCHHHHHHHH------------------------HHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTC
T ss_pred CcccCCHHHHHHHH------------------------hhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCC
Confidence 6 233 2233333 445555566666665 555555566677777777777774 3
Q ss_pred cccCCcccCCCCCCcEEECcCCCCcccCCcccCCCCCEEEeeCCCCCCccCcccc
Q 038019 294 TGQIPATLFNIDSLEYLFLGNNSLSGTLPDQKSENLQKIDLSHNHLSGTFPLWVN 348 (866)
Q Consensus 294 ~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~Ls~N~l~g~~p~~~~ 348 (866)
.......+..+++|+.|+|++| ++...-......+..|++++|++++..|.++.
T Consensus 261 ~~~~~~~l~~~~~L~~L~l~~~-i~~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 261 IPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp CGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred CHHHHHHHhcCCCCCEEeccCc-cCHHHHHHHHhhCcceEEecccCccccCCccc
Confidence 3222235677888888888888 33211111123577788899999988887654
No 79
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=9e-24 Score=236.25 Aligned_cols=244 Identities=18% Similarity=0.196 Sum_probs=143.7
Q ss_pred CCcccCCCCCCCEEEccCCCCCCCCC----ccccCCCCcCEEeccCCc---CCCCCCccc-------cCCCCCCEeeccC
Q 038019 81 IPEELVTLQYLTVLKIDQNFFTGPLP----SFIGNLSRLMFLSFSHND---FSGPVPREL-------GNLKELTVLAFGT 146 (866)
Q Consensus 81 ~p~~l~~l~~L~~L~Ls~n~l~~~~p----~~l~~l~~L~~L~Ls~N~---l~~~~p~~l-------~~l~~L~~L~Ls~ 146 (866)
++..+..+++|++|+|++|.+++..+ ..|.++++|++|+|++|. +++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 55566667777777777777765433 335667777777777753 334445444 5666666666666
Q ss_pred CCCCC----CCchhhcCCCCccEEEeecCCCCCCChhhhh----cC---------cCCCEEEecCCCCC-CCCc---ccc
Q 038019 147 NNFSG----ALPPELGNLAKLEQLYIDSCGAGGEIPSTFA----KL---------RNMQTLWASDNPFT-GKIP---DFI 205 (866)
Q Consensus 147 N~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~p---~~l 205 (866)
|.+++ .+|..+..+++|++|+|++|.++...+..+. .+ ++|++|+|++|+++ +.++ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 66665 2455556666666666666666433222222 22 55555555555554 2222 233
Q ss_pred cCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCch-hhhcCCCCCceeccCcccc----cCCCcccCCC
Q 038019 206 GNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLD-FVMSLKNLTDLSLRNALIT----GTIPFGIGEL 280 (866)
Q Consensus 206 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~-~~~~l~~L~~L~L~~n~l~----~~~p~~~~~l 280 (866)
..+++|++|+|++|.+...-. ....+ .+..+++|+.|+|++|.++ ..+|..+..+
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~--------------------~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~ 243 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGI--------------------EHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSW 243 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHH--------------------HHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGC
T ss_pred HhCCCcCEEECcCCCCCHhHH--------------------HHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccC
Confidence 444455555555554441000 00111 3445566666666666664 4455666777
Q ss_pred CCcCEEeeecCcCccc----CCccc--CCCCCCcEEECcCCCCcc----cCCccc---CCCCCEEEeeCCCCCCccC
Q 038019 281 QMLQILDLSFNNLTGQ----IPATL--FNIDSLEYLFLGNNSLSG----TLPDQK---SENLQKIDLSHNHLSGTFP 344 (866)
Q Consensus 281 ~~L~~L~Ls~N~l~~~----~p~~l--~~l~~L~~L~L~~N~l~g----~~p~~~---~~~L~~L~Ls~N~l~g~~p 344 (866)
++|+.|+|++|.+++. ++..+ ..+++|++|+|++|.+++ .+|... +++|+.|+|++|++++..+
T Consensus 244 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 244 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 7777777777777654 45555 337788888888888876 355533 4788888888888887664
No 80
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=9e-24 Score=236.24 Aligned_cols=240 Identities=19% Similarity=0.208 Sum_probs=159.0
Q ss_pred CCCccccCCCCcCEEeccCCcCCCCCC----ccccCCCCCCEeeccCCC---CCCCCchhh-------cCCCCccEEEee
Q 038019 104 PLPSFIGNLSRLMFLSFSHNDFSGPVP----RELGNLKELTVLAFGTNN---FSGALPPEL-------GNLAKLEQLYID 169 (866)
Q Consensus 104 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p----~~l~~l~~L~~L~Ls~N~---l~~~~p~~l-------~~l~~L~~L~L~ 169 (866)
.++..+..+++|++|+|++|.++...+ ..|..+++|++|+|++|. +++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 356667777888888888887775433 346677778888777753 334445444 455666666666
Q ss_pred cCCCCC----CChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCC---------CCCC
Q 038019 170 SCGAGG----EIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKL---------ASLE 236 (866)
Q Consensus 170 ~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l---------~~L~ 236 (866)
+|.++. .+|..+..+++|++|+|++|.+++..+..+.. .+..+ ++|+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~--------------------~l~~l~~~~~~~~~~~L~ 162 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR--------------------ALQELAVNKKAKNAPPLR 162 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH--------------------HHHHHHHHHHHHTCCCCC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHH--------------------HHHHHhhhhhcccCCCCc
Confidence 666555 24445555555555555555554322222211 11112 4555
Q ss_pred EEEccCccCCCCCch----hhhcCCCCCceeccCccccc-----CCCcccCCCCCcCEEeeecCcCc----ccCCcccCC
Q 038019 237 SLQMSDIYNVSSSLD----FVMSLKNLTDLSLRNALITG-----TIPFGIGELQMLQILDLSFNNLT----GQIPATLFN 303 (866)
Q Consensus 237 ~L~l~~n~~~~~~~~----~~~~l~~L~~L~L~~n~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~l~~ 303 (866)
.|++++|.+...... .+..+++|+.|+|++|.++. ..+..+..+++|+.|+|++|.++ ..+|..+..
T Consensus 163 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 163 SIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp EEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred EEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 555555554422222 44566777778888887762 34447888999999999999996 578888999
Q ss_pred CCCCcEEECcCCCCccc----CCccc----CCCCCEEEeeCCCCCC----ccCccc-c--ccc-cccccccccccc
Q 038019 304 IDSLEYLFLGNNSLSGT----LPDQK----SENLQKIDLSHNHLSG----TFPLWV-N--SEL-QMNLAVNNFKFD 363 (866)
Q Consensus 304 l~~L~~L~L~~N~l~g~----~p~~~----~~~L~~L~Ls~N~l~g----~~p~~~-~--~~~-~l~l~~N~~~~~ 363 (866)
+++|++|+|++|.+++. ++... .++|+.|+|++|++++ .+|..+ . ..+ .|++++|.+++.
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 99999999999999865 34432 6889999999999998 577766 2 333 499999999865
No 81
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=3.6e-22 Score=216.13 Aligned_cols=228 Identities=17% Similarity=0.161 Sum_probs=132.6
Q ss_pred CCCEEEccCCCCCCCCCc---cccCCCCcCEEeccCCcCCCCCCccc--cCCCCCCEeeccCCCCCCCCc----hhhcCC
Q 038019 90 YLTVLKIDQNFFTGPLPS---FIGNLSRLMFLSFSHNDFSGPVPREL--GNLKELTVLAFGTNNFSGALP----PELGNL 160 (866)
Q Consensus 90 ~L~~L~Ls~n~l~~~~p~---~l~~l~~L~~L~Ls~N~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~~p----~~l~~l 160 (866)
.++.|.+.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 356666666555421000 01123456666666666666666665 666666666666666665443 233445
Q ss_pred CCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCC--C--cccccCCCCCCeEEccCCCCCCCCchhhcCCCCCC
Q 038019 161 AKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGK--I--PDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLE 236 (866)
Q Consensus 161 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 236 (866)
++|++|+|++|++++..+..|..+++|++|+|++|++.+. + +..+..+++|++|+|++|+++. ++..
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~-------- 215 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGV-------- 215 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHH--------
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHH--------
Confidence 5566666666655555555555555555555555554431 1 1122345555555555555431 1110
Q ss_pred EEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCC---CCcCEEeeecCcCcccCCcccCCCCCCcEEECc
Q 038019 237 SLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGEL---QMLQILDLSFNNLTGQIPATLFNIDSLEYLFLG 313 (866)
Q Consensus 237 ~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 313 (866)
....+..+++|++|+|++|.+++..|..+..+ ++|+.|+|++|+++ .+|..+. ++|++|+|+
T Consensus 216 ------------~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls 280 (310)
T 4glp_A 216 ------------CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLS 280 (310)
T ss_dssp ------------HHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECC
T ss_pred ------------HHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECC
Confidence 00123556777777777777777766666655 57888888888887 5566554 678888888
Q ss_pred CCCCcccCCcccCCCCCEEEeeCCCCCC
Q 038019 314 NNSLSGTLPDQKSENLQKIDLSHNHLSG 341 (866)
Q Consensus 314 ~N~l~g~~p~~~~~~L~~L~Ls~N~l~g 341 (866)
+|++++.......++|+.|+|++|+++.
T Consensus 281 ~N~l~~~~~~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 281 SNRLNRAPQPDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp SCCCCSCCCTTSCCCCSCEECSSTTTSC
T ss_pred CCcCCCCchhhhCCCccEEECcCCCCCC
Confidence 8888863222345778888888888764
No 82
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=1.7e-23 Score=229.30 Aligned_cols=233 Identities=16% Similarity=0.206 Sum_probs=183.5
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCC-CCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGP-LPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
.+++.|++.+|.+.+..+. +..+++|++|+|++|.+++. ++..+.++++|++|+|++|.+++..+..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4789999999999988776 66899999999999999866 788899999999999999999988889999999999999
Q ss_pred ccCC-CCCCC-CchhhcCCCCccEEEeecC-CCCCC-ChhhhhcCc-CCCEEEecCC--CCC-CCCcccccCCCCCCeEE
Q 038019 144 FGTN-NFSGA-LPPELGNLAKLEQLYIDSC-GAGGE-IPSTFAKLR-NMQTLWASDN--PFT-GKIPDFIGNWTKLKSLR 215 (866)
Q Consensus 144 Ls~N-~l~~~-~p~~l~~l~~L~~L~L~~n-~l~~~-~p~~~~~l~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L~ 215 (866)
|++| .+++. ++..+.++++|++|+|++| .+++. ++..+..++ +|++|++++| .++ +.++..+.++++|++|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 9999 67753 6777899999999999999 88865 678899999 9999999999 565 45677888999999999
Q ss_pred ccCCC-CCCCCchhhcCCCCCCEEEccCcc-CCCCCchhhhcCCCCCceeccCcccccCCCcccCCC-CCcCEEeeecCc
Q 038019 216 FQGNS-FQGPIPSSLSKLASLESLQMSDIY-NVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGEL-QMLQILDLSFNN 292 (866)
Q Consensus 216 L~~N~-l~~~~p~~~~~l~~L~~L~l~~n~-~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l-~~L~~L~Ls~N~ 292 (866)
|++|. +++..+..+.++++|+.|++++|. +.......+..+++|+.|++++| ++.. .+..+ .+|..|++++|+
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~ 304 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSH 304 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCC
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEeccc
Confidence 99999 777777888889999999998875 22222334566677777777666 3221 11111 123444455555
Q ss_pred CcccCCcccC
Q 038019 293 LTGQIPATLF 302 (866)
Q Consensus 293 l~~~~p~~l~ 302 (866)
+++..|..++
T Consensus 305 l~~~~~~~~~ 314 (336)
T 2ast_B 305 FTTIARPTIG 314 (336)
T ss_dssp SCCTTCSSCS
T ss_pred CccccCCccc
Confidence 5555554443
No 83
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=8.8e-22 Score=204.59 Aligned_cols=203 Identities=20% Similarity=0.203 Sum_probs=141.4
Q ss_pred CCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCc-CCCCCCccccCCCCCCEeeccC-CCCCCCCchhh
Q 038019 80 VIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHND-FSGPVPRELGNLKELTVLAFGT-NNFSGALPPEL 157 (866)
Q Consensus 80 ~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~l 157 (866)
.+|. +. .+|++|+|++|++++..+..|.++++|++|+|++|+ ++...+..|.++++|++|+|++ |.++...+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4555 43 378899999998887777788888889999998886 7766666888888888888888 88887766778
Q ss_pred cCCCCccEEEeecCCCCCCChhhhhcCcCCC---EEEecCC-CCCCCCcccccCCCCCC-eEEccCCCCCCCCchhhcCC
Q 038019 158 GNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQ---TLWASDN-PFTGKIPDFIGNWTKLK-SLRFQGNSFQGPIPSSLSKL 232 (866)
Q Consensus 158 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~L~~N~l~~~~p~~~~~l 232 (866)
.++++|++|+|++|.+++ +|. |..+++|+ +|++++| .+++..+..|.++++|+ .|++++|.++...+..|..
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~- 178 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG- 178 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-
Confidence 888888888888888876 554 77777777 8888888 77766666677777788 8888877776322222222
Q ss_pred CCCCEEEccCccCCCCCchhhhcCCCCCceeccCcc-cccCCCcccCCC-CCcCEEeeecCcCcccCCcccCCCCCCcEE
Q 038019 233 ASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNAL-ITGTIPFGIGEL-QMLQILDLSFNNLTGQIPATLFNIDSLEYL 310 (866)
Q Consensus 233 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 310 (866)
++| +.|+|++|. +++..+..|..+ ++|+.|++++|++++. |.. .+++|+.|
T Consensus 179 ~~L------------------------~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L 231 (239)
T 2xwt_C 179 TKL------------------------DAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKEL 231 (239)
T ss_dssp CEE------------------------EEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEE
T ss_pred CCC------------------------CEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCcee
Confidence 444 444555552 444444455566 6666666666666633 322 45566666
Q ss_pred ECcCC
Q 038019 311 FLGNN 315 (866)
Q Consensus 311 ~L~~N 315 (866)
+++++
T Consensus 232 ~l~~~ 236 (239)
T 2xwt_C 232 IARNT 236 (239)
T ss_dssp ECTTC
T ss_pred eccCc
Confidence 66654
No 84
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=9.1e-22 Score=204.48 Aligned_cols=204 Identities=17% Similarity=0.169 Sum_probs=158.7
Q ss_pred CCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCC-CCCCCchhhcCCCCccEEEeec-CCCCCCChhhh
Q 038019 104 PLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNN-FSGALPPELGNLAKLEQLYIDS-CGAGGEIPSTF 181 (866)
Q Consensus 104 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~L~~-n~l~~~~p~~~ 181 (866)
.+|. +. ++|++|+|++|++++..+..|.++++|++|+|++|. ++...+..|.++++|++|+|++ |.+++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4555 43 389999999999997777789999999999999997 8766667888999999999988 88887777788
Q ss_pred hcCcCCCEEEecCCCCCCCCcccccCCCCCC---eEEccCC-CCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCC
Q 038019 182 AKLRNMQTLWASDNPFTGKIPDFIGNWTKLK---SLRFQGN-SFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLK 257 (866)
Q Consensus 182 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~ 257 (866)
.++++|++|++++|.+++ +|. +..+++|+ +|++++| .+++..+..|.+++
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~------------------------ 155 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLC------------------------ 155 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTB------------------------
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchh------------------------
Confidence 888888888888888875 555 77777777 8888887 77655444555554
Q ss_pred CCC-ceeccCcccccCCCcccCCCCCcCEEeeecCc-CcccCCcccCCC-CCCcEEECcCCCCcccCCcccCCCCCEEEe
Q 038019 258 NLT-DLSLRNALITGTIPFGIGELQMLQILDLSFNN-LTGQIPATLFNI-DSLEYLFLGNNSLSGTLPDQKSENLQKIDL 334 (866)
Q Consensus 258 ~L~-~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l-~~L~~L~L~~N~l~g~~p~~~~~~L~~L~L 334 (866)
+|+ .|++++|.++...+..+.. ++|+.|++++|+ +++..+..+..+ ++|+.|+|++|++++ +|...+++|+.|++
T Consensus 156 ~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~~~~~L~~L~l 233 (239)
T 2xwt_C 156 NETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSKGLEHLKELIA 233 (239)
T ss_dssp SSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCTTCTTCSEEEC
T ss_pred cceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChhHhccCceeec
Confidence 445 5555556665222233444 799999999995 997778889999 999999999999985 55557789999999
Q ss_pred eCCC
Q 038019 335 SHNH 338 (866)
Q Consensus 335 s~N~ 338 (866)
+++.
T Consensus 234 ~~~~ 237 (239)
T 2xwt_C 234 RNTW 237 (239)
T ss_dssp TTC-
T ss_pred cCcc
Confidence 8763
No 85
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=5.7e-22 Score=214.59 Aligned_cols=227 Identities=18% Similarity=0.186 Sum_probs=174.9
Q ss_pred eEEEEEEcccCcCCCC-C--cccCCCCCCCEEEccCCCCCCCCCccc--cCCCCcCEEeccCCcCCCCCC----ccccCC
Q 038019 66 HITKLRVYGLNKKGVI-P--EELVTLQYLTVLKIDQNFFTGPLPSFI--GNLSRLMFLSFSHNDFSGPVP----RELGNL 136 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~-p--~~l~~l~~L~~L~Ls~n~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~~p----~~l~~l 136 (866)
+++.|.+.++.++... . ..+..+++|++|+|++|.+++..|..+ .++++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 4677888777665321 1 112345679999999999999999888 999999999999999997666 445689
Q ss_pred CCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCC--C--hhhhhcCcCCCEEEecCCCCCCCCcc----cccCC
Q 038019 137 KELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGE--I--PSTFAKLRNMQTLWASDNPFTGKIPD----FIGNW 208 (866)
Q Consensus 137 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~l~~l 208 (866)
++|++|+|++|.+++..+..++.+++|++|+|++|++.+. + +..+..+++|++|+|++|+++. ++. .+.++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 9999999999999999889999999999999999998753 2 2234789999999999999973 333 35788
Q ss_pred CCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEee
Q 038019 209 TKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDL 288 (866)
Q Consensus 209 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 288 (866)
++|++|+|++|++++..|..+..+. .+++|++|+|++|.++ .+|..+. ++|+.|+|
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~---------------------~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~L 279 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCM---------------------WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDL 279 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCC---------------------CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEEC
T ss_pred CCCCEEECCCCCCCccchhhHHhcc---------------------CcCcCCEEECCCCCCC-chhhhhc--CCCCEEEC
Confidence 9999999999999988777666542 1245566666666666 4455443 67788888
Q ss_pred ecCcCcccCCcccCCCCCCcEEECcCCCCcc
Q 038019 289 SFNNLTGQIPATLFNIDSLEYLFLGNNSLSG 319 (866)
Q Consensus 289 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g 319 (866)
++|++++. |. +..+++|+.|+|++|+++.
T Consensus 280 s~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 280 SSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 88888753 32 5667888888888888763
No 86
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=8e-21 Score=198.89 Aligned_cols=177 Identities=15% Similarity=0.231 Sum_probs=154.4
Q ss_pred EEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccC
Q 038019 67 ITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGT 146 (866)
Q Consensus 67 v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 146 (866)
.+.+++.+++++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 457888888887 4666555 5899999999999988888899999999999999999988888899999999999999
Q ss_pred CCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCc
Q 038019 147 NNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIP 226 (866)
Q Consensus 147 N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 226 (866)
|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 99998888888999999999999999998888888899999999999999997777788889999999999999997777
Q ss_pred hhhcCCCCCCEEEccCccCC
Q 038019 227 SSLSKLASLESLQMSDIYNV 246 (866)
Q Consensus 227 ~~~~~l~~L~~L~l~~n~~~ 246 (866)
..|..+++|+.|++++|.+.
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBC
T ss_pred HHHhCCCCCCEEEeeCCcee
Confidence 78888888888888777664
No 87
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=6.7e-23 Score=226.98 Aligned_cols=254 Identities=16% Similarity=0.175 Sum_probs=196.1
Q ss_pred EEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCC----ccccCCC-CCCEeeccCCCCCCCCchhhcCC-----CC
Q 038019 93 VLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVP----RELGNLK-ELTVLAFGTNNFSGALPPELGNL-----AK 162 (866)
Q Consensus 93 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p----~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l-----~~ 162 (866)
.++|+.|.+++.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999888888877889999999999987776 7788888 89999999999998888888775 99
Q ss_pred ccEEEeecCCCCCCChhhhhc----C-cCCCEEEecCCCCCCCCccccc----C-CCCCCeEEccCCCCCCCCc----hh
Q 038019 163 LEQLYIDSCGAGGEIPSTFAK----L-RNMQTLWASDNPFTGKIPDFIG----N-WTKLKSLRFQGNSFQGPIP----SS 228 (866)
Q Consensus 163 L~~L~L~~n~l~~~~p~~~~~----l-~~L~~L~L~~N~l~~~~p~~l~----~-l~~L~~L~L~~N~l~~~~p----~~ 228 (866)
|++|+|++|.+++..+..+.. + ++|++|+|++|++++..+..+. . .++|++|+|++|.++.... ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 999999999999888775554 3 8999999999999877665543 3 3689999999999986443 44
Q ss_pred hcCCC-CCCEEEccCccCCCCCchh----hhcC-CCCCceeccCcccccC----CCcccCC-CCCcCEEeeecCcCcccC
Q 038019 229 LSKLA-SLESLQMSDIYNVSSSLDF----VMSL-KNLTDLSLRNALITGT----IPFGIGE-LQMLQILDLSFNNLTGQI 297 (866)
Q Consensus 229 ~~~l~-~L~~L~l~~n~~~~~~~~~----~~~l-~~L~~L~L~~n~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~ 297 (866)
+..++ +|+.|+|++|.+....... +..+ ++|+.|+|++|.+++. ++..+.. .++|+.|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45665 8999999999887666543 3445 5899999999998863 3444444 358999999999988654
Q ss_pred C----cccCCCCCCcEEECcCCCCcccCCc---------ccCCCCCEEEeeCCCCCCccCcc
Q 038019 298 P----ATLFNIDSLEYLFLGNNSLSGTLPD---------QKSENLQKIDLSHNHLSGTFPLW 346 (866)
Q Consensus 298 p----~~l~~l~~L~~L~L~~N~l~g~~p~---------~~~~~L~~L~Ls~N~l~g~~p~~ 346 (866)
+ ..+..+++|+.|+|++|.+.+..+. ...++|+.||+++|++.+..+..
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~ 303 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIP 303 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHH
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHH
Confidence 4 3456678899999999985432221 12356888888888887665543
No 88
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=6.2e-21 Score=206.08 Aligned_cols=195 Identities=24% Similarity=0.317 Sum_probs=117.9
Q ss_pred cCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCcc
Q 038019 85 LVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLE 164 (866)
Q Consensus 85 l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 164 (866)
+.++++|++|++++|.++. ++ .+..+++|++|+|++|.+++..+ +..+++|++|+|++|.+++. +.+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCC
Confidence 3456667777777777663 34 46667777777777777764333 66777777777777776643 3566666677
Q ss_pred EEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCcc
Q 038019 165 QLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIY 244 (866)
Q Consensus 165 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~ 244 (866)
+|+|++|++++. + .+..+++|++|++++|.+++..+ +..+++|+.|+|++|.+++..+ +..+++|+.|+++
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~--- 181 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKAD--- 181 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC---
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECC---
Confidence 777766666653 2 26666666666666666664332 5566666666666666654222 4455545444444
Q ss_pred CCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcc
Q 038019 245 NVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSG 319 (866)
Q Consensus 245 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g 319 (866)
+|.+++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 182 ---------------------~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 182 ---------------------DNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp ---------------------SSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred ---------------------CCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 444443222 4555666666666666664432 5666777777777777654
No 89
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.85 E-value=1.7e-20 Score=196.42 Aligned_cols=180 Identities=19% Similarity=0.202 Sum_probs=140.2
Q ss_pred CCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEee
Q 038019 90 YLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYID 169 (866)
Q Consensus 90 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 169 (866)
..++++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4578999999987 5666554 689999999999998888889999999999999999988888888888899999998
Q ss_pred cCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCC
Q 038019 170 SCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSS 249 (866)
Q Consensus 170 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~ 249 (866)
+|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~---------- 161 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLS---------- 161 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE----------
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEE----------
Confidence 8888887778888888888888888888876666677888888888888888766555666655555555
Q ss_pred chhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCccc
Q 038019 250 LDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQ 296 (866)
Q Consensus 250 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 296 (866)
|++|.+++..+..+..+++|+.|+|++|.+.+.
T Consensus 162 --------------L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 162 --------------LSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp --------------CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred --------------CCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 455555555555666677777777777777644
No 90
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=7.4e-21 Score=205.44 Aligned_cols=208 Identities=23% Similarity=0.302 Sum_probs=149.4
Q ss_pred EEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCC
Q 038019 94 LKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGA 173 (866)
Q Consensus 94 L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l 173 (866)
+.+..+.+++.+ .+..+++|++|++++|.++. +| .+..+++|++|+|++|.+++..+ +..+++|++|+|++|.+
T Consensus 24 ~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l 97 (308)
T 1h6u_A 24 IAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPL 97 (308)
T ss_dssp HHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCC
T ss_pred HHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcC
Confidence 345555555432 24567788888888887764 44 57777888888888887775433 77777777777777777
Q ss_pred CCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhh
Q 038019 174 GGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFV 253 (866)
Q Consensus 174 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~ 253 (866)
++. ..+..+++|++|+|++|++++. +. +..+++|++|+|++|.+++..+ +
T Consensus 98 ~~~--~~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--------------------------l 147 (308)
T 1h6u_A 98 KNV--SAIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--------------------------L 147 (308)
T ss_dssp SCC--GGGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--------------------------G
T ss_pred CCc--hhhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--------------------------c
Confidence 653 2466777777777777777643 22 6666666666666666654322 3
Q ss_pred hcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCcccCCCCCEEE
Q 038019 254 MSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQKSENLQKID 333 (866)
Q Consensus 254 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~ 333 (866)
..+++|+.|+|++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|++|+|++|++++..+....++|+.|+
T Consensus 148 ~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~ 223 (308)
T 1h6u_A 148 AGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPLANTSNLFIVT 223 (308)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEE
T ss_pred cCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccccccCCCCCCEEE
Confidence 445566666677777765433 7889999999999999986544 888999999999999999877655678999999
Q ss_pred eeCCCCCC
Q 038019 334 LSHNHLSG 341 (866)
Q Consensus 334 Ls~N~l~g 341 (866)
|++|++++
T Consensus 224 l~~N~i~~ 231 (308)
T 1h6u_A 224 LTNQTITN 231 (308)
T ss_dssp EEEEEEEC
T ss_pred ccCCeeec
Confidence 99999986
No 91
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.83 E-value=1.5e-21 Score=208.50 Aligned_cols=142 Identities=15% Similarity=0.207 Sum_probs=97.6
Q ss_pred hhccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeee---cCCCCchhHHHHHHHHHHHHHh
Q 038019 635 VLVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAM---RGHLTEKADVFSFGVVALEIIS 711 (866)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~---~~~~t~ksDVySfGvvLlEl~t 711 (866)
++|+.....|++.+++...|+.|||+++.+............+||++|||||++. .+.++.|+||||||||||||+|
T Consensus 153 IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Ellt 232 (307)
T 3omv_A 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT 232 (307)
T ss_dssp CBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHH
Confidence 4455555568999899999999999999887655444556678999999999986 3569999999999999999999
Q ss_pred cCCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 038019 712 GRASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAG 786 (866)
Q Consensus 712 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~ 786 (866)
|+.||....... .+......+ ..+|.+...+......+.+++..||+.+|++||||.||+++|+.
T Consensus 233 g~~Pf~~~~~~~------~~~~~~~~~----~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~ 297 (307)
T 3omv_A 233 GELPYSHINNRD------QIIFMVGRG----YASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp SSCTTTTCCCHH------HHHHHHHTT----CCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHH
T ss_pred CCCCCCCCChHH------HHHHHHhcC----CCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 999997543322 111122221 23343333333334456677789999999999999999999874
No 92
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=8.9e-20 Score=185.08 Aligned_cols=181 Identities=17% Similarity=0.226 Sum_probs=121.4
Q ss_pred EEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCC
Q 038019 68 TKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTN 147 (866)
Q Consensus 68 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 147 (866)
+.+++.++.++. +|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 456666666653 34333 357788888888887666666777888888888888877665566777777777777777
Q ss_pred CCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCch
Q 038019 148 NFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPS 227 (866)
Q Consensus 148 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 227 (866)
++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 7776555556677777777777776666555556666666666666666665444445555566666666554432
Q ss_pred hhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCC
Q 038019 228 SLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQM 282 (866)
Q Consensus 228 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 282 (866)
.+++|+.|+++.|.++|.+|..++.++.
T Consensus 163 ---------------------------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ---------------------------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ---------------------------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ---------------------------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 2456777888888888888877776654
No 93
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.82 E-value=5.1e-20 Score=202.73 Aligned_cols=198 Identities=17% Similarity=0.060 Sum_probs=140.4
Q ss_pred EEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCC-ccccCCCCCCE-eeccC
Q 038019 69 KLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVP-RELGNLKELTV-LAFGT 146 (866)
Q Consensus 69 ~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~-L~Ls~ 146 (866)
.++.++++++ .+|..+ .++|++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|++ +.++.
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4566677777 567666 3689999999999986666789999999999999999877665 56889988775 66677
Q ss_pred CCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecC-CCCCCCCcccccCCC-CCCeEEccCCCCCCC
Q 038019 147 NNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASD-NPFTGKIPDFIGNWT-KLKSLRFQGNSFQGP 224 (866)
Q Consensus 147 N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~ 224 (866)
|+++...|..|..+++|++|++++|++....+..+....++..|++.+ +++....+..|..+. .++.|+|++|+++..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i 169 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI 169 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC
Confidence 899888888899999999999999999888777777788888888866 456644455566554 578888888888743
Q ss_pred CchhhcCCCCCCEEEccC-ccCCCCCchhhhcCCCCCceeccCcccc
Q 038019 225 IPSSLSKLASLESLQMSD-IYNVSSSLDFVMSLKNLTDLSLRNALIT 270 (866)
Q Consensus 225 ~p~~~~~l~~L~~L~l~~-n~~~~~~~~~~~~l~~L~~L~L~~n~l~ 270 (866)
+.......+|+.|++.+ |.+.......|..+++|+.|+|++|.++
T Consensus 170 -~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 170 -HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp -CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred -ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 33333445566666543 3333333333444444444444444443
No 94
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.82 E-value=1.5e-21 Score=209.32 Aligned_cols=138 Identities=22% Similarity=0.289 Sum_probs=103.5
Q ss_pred hhccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cC
Q 038019 635 VLVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GR 713 (866)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~ 713 (866)
++++.....|++.+++...|+.|||+++.+..+..........||++|||||++.++.++.|+||||||||||||+| |+
T Consensus 166 iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~ 245 (308)
T 4gt4_A 166 VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 245 (308)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCC
Confidence 34444445589999999999999999998866544333344579999999999999999999999999999999999 89
Q ss_pred CCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 714 ASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 714 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
.||...... .+.+.+ ..+... | .+.++...+.+++..||+.||++||||.||++.|+..
T Consensus 246 ~Pf~~~~~~---~~~~~i----~~~~~~----~----~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 246 QPYCGYSNQ---DVVEMI----RNRQVL----P----CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp CTTTTCCHH---HHHHHH----HTTCCC----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCCCCHH---HHHHHH----HcCCCC----C----CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 999765432 233322 222211 1 1122334566788899999999999999999999853
No 95
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.81 E-value=3e-21 Score=209.06 Aligned_cols=141 Identities=21% Similarity=0.207 Sum_probs=94.8
Q ss_pred hhccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cC
Q 038019 635 VLVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GR 713 (866)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~ 713 (866)
++|+.....|++.+++...|+.|||+++.+.......+.....||++|||||++.+..++.|+||||||||||||+| |+
T Consensus 179 iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~ 258 (329)
T 4aoj_A 179 FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 258 (329)
T ss_dssp CCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred eecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCC
Confidence 34444445588998999999999999998877665555556789999999999999999999999999999999999 89
Q ss_pred CCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 714 ASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 714 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
.||......+ +...+ ..+.. +..+. .....+.+++.+||+.||++||||.||+++|+...+.
T Consensus 259 ~Pf~~~~~~~---~~~~i----~~g~~-----~~~p~---~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 259 QPWYQLSNTE---AIDCI----TQGRE-----LERPR---ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp CTTCSSCHHH---HHHHH----HHTCC-----CCCCT---TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCCCCCHHH---HHHHH----HcCCC-----CCCcc---cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 9997654322 22222 22211 11111 1223456677899999999999999999999976543
No 96
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.80 E-value=9.8e-20 Score=200.48 Aligned_cols=238 Identities=16% Similarity=0.075 Sum_probs=156.4
Q ss_pred CEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCc-hhhcCCCCccE-EEee
Q 038019 92 TVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALP-PELGNLAKLEQ-LYID 169 (866)
Q Consensus 92 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~-L~L~ 169 (866)
++++.++++++ .+|..+ .++|++|+|++|+|+...+.+|.++++|++|+|++|++.+.+| ..|.++++|++ +.+.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56888999998 677765 3689999999999996666789999999999999999876665 46788888775 5667
Q ss_pred cCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccC-CCCCCCCchhhcCCC-CCCEEEccCccCCC
Q 038019 170 SCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQG-NSFQGPIPSSLSKLA-SLESLQMSDIYNVS 247 (866)
Q Consensus 170 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~l~~n~~~~ 247 (866)
.|+++...|..|..+++|++|++++|+++...+..+....++..|++.+ +.+....+..|..+. .|+.|++++|.+..
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 7888888888899999999999999998876666666667778888865 456544455565553 46667777666654
Q ss_pred CCchhhhcCCCCCceeccC-cccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCc-cc
Q 038019 248 SSLDFVMSLKNLTDLSLRN-ALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPD-QK 325 (866)
Q Consensus 248 ~~~~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~~ 325 (866)
.....+ ...+|+.|++.+ |.++...+..|..+++|+.|+|++|+|+...+..+ .+|+.|.+.++.--..+|. ..
T Consensus 169 i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP~l~~ 244 (350)
T 4ay9_X 169 IHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLPTLEK 244 (350)
T ss_dssp ECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCCCTTT
T ss_pred CChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCCCchh
Confidence 433333 234566666653 33433333345666666666666666653333222 3344444333322223332 22
Q ss_pred CCCCCEEEeeC
Q 038019 326 SENLQKIDLSH 336 (866)
Q Consensus 326 ~~~L~~L~Ls~ 336 (866)
+++|+.+++++
T Consensus 245 l~~L~~l~l~~ 255 (350)
T 4ay9_X 245 LVALMEASLTY 255 (350)
T ss_dssp CCSCCEEECSC
T ss_pred CcChhhCcCCC
Confidence 34555555544
No 97
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.80 E-value=8.7e-20 Score=211.67 Aligned_cols=203 Identities=25% Similarity=0.317 Sum_probs=157.4
Q ss_pred CCe-eccccCCCCCeeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCC
Q 038019 51 PAI-VCNCTFDNGATCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPV 129 (866)
Q Consensus 51 ~~v-~C~~~~~~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 129 (866)
.++ .|.|. +++.|++++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +
T Consensus 51 ~~l~~C~~~-------~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-i 115 (571)
T 3cvr_A 51 SLLKECLIN-------QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-L 115 (571)
T ss_dssp HHHHHHHHT-------TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-C
T ss_pred hhccccccC-------CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-c
Confidence 466 67642 68899999999987 777663 78999999999998 567 557899999999999987 7
Q ss_pred CccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCC
Q 038019 130 PRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWT 209 (866)
Q Consensus 130 p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 209 (866)
|. |.+ +|++|+|++|++++ +|. .+++|+.|+|++|.+++ +|. .+++|++|+|++|++++ +|. |. +
T Consensus 116 p~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~ 180 (571)
T 3cvr_A 116 PE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--E 180 (571)
T ss_dssp CC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--T
T ss_pred ch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--C
Confidence 77 665 89999999999987 555 68899999999999887 554 57889999999998886 666 65 7
Q ss_pred CCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeee
Q 038019 210 KLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLS 289 (866)
Q Consensus 210 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 289 (866)
+|+.|+|++|.|+ .+|. |.. +| +...+.|+.|+|++|.++ .+|..+..+++|+.|+|+
T Consensus 181 ~L~~L~Ls~N~L~-~lp~-~~~--~L-----------------~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~ 238 (571)
T 3cvr_A 181 SLEALDVSTNLLE-SLPA-VPV--RN-----------------HHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILE 238 (571)
T ss_dssp TCCEEECCSSCCS-SCCC-CC---------------------------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECC
T ss_pred CCCEEECcCCCCC-chhh-HHH--hh-----------------hcccccceEEecCCCcce-ecCHHHhcCCCCCEEEee
Confidence 8889999988888 4554 432 22 112244578888888887 467777779999999999
Q ss_pred cCcCcccCCcccCCCC
Q 038019 290 FNNLTGQIPATLFNID 305 (866)
Q Consensus 290 ~N~l~~~~p~~l~~l~ 305 (866)
+|.+++.+|..+..+.
T Consensus 239 ~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 239 DNPLSSRIRESLSQQT 254 (571)
T ss_dssp SSSCCHHHHHHHHHHH
T ss_pred CCcCCCcCHHHHHHhh
Confidence 9999988888776543
No 98
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.80 E-value=1.9e-19 Score=182.62 Aligned_cols=177 Identities=20% Similarity=0.258 Sum_probs=154.8
Q ss_pred CCeeccccC----CCCCeeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCC
Q 038019 51 PAIVCNCTF----DNGATCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFS 126 (866)
Q Consensus 51 ~~v~C~~~~----~~~~~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 126 (866)
.++.|.... ......+++.|++++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|+++
T Consensus 10 ~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 89 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ 89 (208)
T ss_dssp TEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCC
Confidence 567775321 1123457999999999999877778999999999999999999777777899999999999999999
Q ss_pred CCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCccccc
Q 038019 127 GPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIG 206 (866)
Q Consensus 127 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 206 (866)
+..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|++++|.+.+
T Consensus 90 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~------- 162 (208)
T 2o6s_A 90 SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC------- 162 (208)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------
T ss_pred ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------
Confidence 7777789999999999999999998877789999999999999999998888889999999999999998764
Q ss_pred CCCCCCeEEccCCCCCCCCchhhcCCCC
Q 038019 207 NWTKLKSLRFQGNSFQGPIPSSLSKLAS 234 (866)
Q Consensus 207 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 234 (866)
.+++|+.|+++.|+++|.+|..++.++.
T Consensus 163 ~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 4568999999999999999998887654
No 99
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.80 E-value=3.2e-21 Score=205.96 Aligned_cols=140 Identities=22% Similarity=0.235 Sum_probs=104.1
Q ss_pred hhccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cC
Q 038019 635 VLVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GR 713 (866)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~ 713 (866)
++|+.....|++..++...|+.|||+++.+..+....+.....||++|||||++.++.++.|+|||||||+||||+| |+
T Consensus 149 iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~ 228 (299)
T 4asz_A 149 FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228 (299)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred cccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCC
Confidence 34444444588998999999999999998876655444444579999999999999999999999999999999999 89
Q ss_pred CCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 714 ASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 714 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
.||......+ +...+ ..+... .. +......+.+++..||+.||++||||+||+++|+...+
T Consensus 229 ~Pf~~~~~~~---~~~~i----~~~~~~-----~~---p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 229 QPWYQLSNNE---VIECI----TQGRVL-----QR---PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp CTTTTSCHHH---HHHHH----HHTCCC-----CC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHH---HHHHH----HcCCCC-----CC---CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 9997654322 22222 222211 11 11222346667789999999999999999999986543
No 100
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.79 E-value=7.4e-19 Score=203.88 Aligned_cols=185 Identities=23% Similarity=0.353 Sum_probs=134.6
Q ss_pred CCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEee
Q 038019 90 YLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYID 169 (866)
Q Consensus 90 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 169 (866)
+|+.|+|++|.|++ +|..+ +++|++|+|++|+|+ .+| ..+++|++|+|++|++++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 78888888888876 66655 377888888888887 566 456788888888888886 565 554 78888888
Q ss_pred cCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCC
Q 038019 170 SCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSS 249 (866)
Q Consensus 170 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~ 249 (866)
+|++++ +|. .+++|+.|+|++|.+++ +|. .+++|+.|+|++|.+++ +|. |. ++|+.|
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L----------- 185 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEAL----------- 185 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEE-----------
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEE-----------
Confidence 888777 444 56778888888887775 554 45677777777777775 444 33 445554
Q ss_pred chhhhcCCCCCceeccCcccccCCCcccCC-----CCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCcc
Q 038019 250 LDFVMSLKNLTDLSLRNALITGTIPFGIGE-----LQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQ 324 (866)
Q Consensus 250 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~ 324 (866)
+|++|.++ .+|. +.. .+.|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|..
T Consensus 186 -------------~Ls~N~L~-~lp~-~~~~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 186 -------------DVSTNLLE-SLPA-VPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp -------------ECCSSCCS-SCCC-CC--------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHH
T ss_pred -------------ECcCCCCC-chhh-HHHhhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHH
Confidence 55555554 3333 332 123399999999999 58888888999999999999999877754
No 101
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.78 E-value=3.2e-20 Score=202.69 Aligned_cols=140 Identities=19% Similarity=0.157 Sum_probs=103.5
Q ss_pred hhccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cC
Q 038019 635 VLVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GR 713 (866)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~ 713 (866)
.+|+.....|++..++...|+.|||+++.+..+..........||++|||||++.++.++.|+|||||||+||||+| |+
T Consensus 206 iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~ 285 (353)
T 4ase_A 206 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 285 (353)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred eecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCC
Confidence 34444444588988999999999999999876654444445679999999999999999999999999999999998 99
Q ss_pred CCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 714 ASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 714 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
.||......+ .+...+.++.. +..++.. ..++.+++..||+.||++||||.||++.|+..+
T Consensus 286 ~Pf~~~~~~~------~~~~~i~~g~~-----~~~p~~~---~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 286 SPYPGVKIDE------EFCRRLKEGTR-----MRAPDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp CSSTTCCCSH------HHHHHHHHTCC-----CCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHH------HHHHHHHcCCC-----CCCCccC---CHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 9997543222 12222333321 1222222 234556777999999999999999999998654
No 102
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.78 E-value=9.3e-21 Score=224.21 Aligned_cols=212 Identities=17% Similarity=0.090 Sum_probs=147.2
Q ss_pred CCchhhcCCCCccEEEeecCCCCCCCh-hhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccC-----------C
Q 038019 152 ALPPELGNLAKLEQLYIDSCGAGGEIP-STFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQG-----------N 219 (866)
Q Consensus 152 ~~p~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-----------N 219 (866)
.+|..+..+++|++|+|++|.++.... ..+..+++|++|+++++...+.++..+..+++|++|+|++ |
T Consensus 284 ~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~ 363 (592)
T 3ogk_B 284 EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEG 363 (592)
T ss_dssp TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTC
T ss_pred HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccC
Confidence 456667778899999999999765443 4468899999999984322223444556788999999993 5
Q ss_pred CCCCC-CchhhcCCCCCCEEEccCccCCCCCchhhhc-CCCCCceecc----CcccccC-----CCcccCCCCCcCEEee
Q 038019 220 SFQGP-IPSSLSKLASLESLQMSDIYNVSSSLDFVMS-LKNLTDLSLR----NALITGT-----IPFGIGELQMLQILDL 288 (866)
Q Consensus 220 ~l~~~-~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~-l~~L~~L~L~----~n~l~~~-----~p~~~~~l~~L~~L~L 288 (866)
.+++. ++..+..+++|+.|+++.+.+.......+.. +++|+.|+++ .|.+++. ++..+..+++|+.|++
T Consensus 364 ~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L 443 (592)
T 3ogk_B 364 LVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAF 443 (592)
T ss_dssp CCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEE
T ss_pred ccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEE
Confidence 55533 2333456899999999777776544555544 8899999996 6677753 3334667889999999
Q ss_pred ecCc--CcccCCcccC-CCCCCcEEECcCCCCccc-CCc--ccCCCCCEEEeeCCCCCCccCccc----ccccccccccc
Q 038019 289 SFNN--LTGQIPATLF-NIDSLEYLFLGNNSLSGT-LPD--QKSENLQKIDLSHNHLSGTFPLWV----NSELQMNLAVN 358 (866)
Q Consensus 289 s~N~--l~~~~p~~l~-~l~~L~~L~L~~N~l~g~-~p~--~~~~~L~~L~Ls~N~l~g~~p~~~----~~~~~l~l~~N 358 (866)
+.|. +++..+..+. .+++|++|+|++|++++. ++. ...++|+.|+|++|++++....++ .....|++++|
T Consensus 444 ~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n 523 (592)
T 3ogk_B 444 YLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGY 523 (592)
T ss_dssp ECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESC
T ss_pred ecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCC
Confidence 8543 6655555444 378899999999998752 222 234789999999999876533322 12234899999
Q ss_pred ccccc
Q 038019 359 NFKFD 363 (866)
Q Consensus 359 ~~~~~ 363 (866)
+++..
T Consensus 524 ~it~~ 528 (592)
T 3ogk_B 524 RASMT 528 (592)
T ss_dssp BCCTT
T ss_pred cCCHH
Confidence 87654
No 103
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=1.3e-18 Score=177.97 Aligned_cols=154 Identities=20% Similarity=0.252 Sum_probs=130.5
Q ss_pred EEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCC-ccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccC
Q 038019 68 TKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLP-SFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGT 146 (866)
Q Consensus 68 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 146 (866)
+.|++++|.++. +|..+. ..+++|+|++|.|++..+ ..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 478888888875 666554 356899999999987655 4578999999999999999987788899999999999999
Q ss_pred CCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCC
Q 038019 147 NNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGP 224 (866)
Q Consensus 147 N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 224 (866)
|.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|+|++|.+...
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 999888888888899999999999999888888888888899999988888887788888888888888888888754
No 104
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=2.2e-18 Score=176.38 Aligned_cols=153 Identities=18% Similarity=0.240 Sum_probs=128.0
Q ss_pred EEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCC
Q 038019 68 TKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTN 147 (866)
Q Consensus 68 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 147 (866)
+.+++.+++++. +|..+. ++|+.|+|++|.|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 356677777664 565554 68999999999999877778999999999999999999888899999999999999999
Q ss_pred CCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCC
Q 038019 148 NFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQG 223 (866)
Q Consensus 148 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 223 (866)
.++...+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 9987666667888999999999988888888888888888888888888887777778888888888888887753
No 105
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=1.8e-18 Score=185.10 Aligned_cols=173 Identities=23% Similarity=0.336 Sum_probs=108.6
Q ss_pred cCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCcc
Q 038019 85 LVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLE 164 (866)
Q Consensus 85 l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 164 (866)
+..+++|+.|++++|.+... + .+..+++|++|+|++|++++..+ +.++++|++|+|++|.+++ + +.+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-SSLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C-hhhccCCCCC
Confidence 34566777777777777643 3 36677777777777777765433 7777777777777777764 2 3466777777
Q ss_pred EEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCcc
Q 038019 165 QLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIY 244 (866)
Q Consensus 165 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~ 244 (866)
+|+|++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|+|++|.+++..+ +..+++|+.|+++
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~--- 186 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLS--- 186 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECC---
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECC---
Confidence 777777766653 3466666777777777766643 456666666666666666664433 5555555555544
Q ss_pred CCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcc
Q 038019 245 NVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTG 295 (866)
Q Consensus 245 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 295 (866)
+|.+++. + .+..+++|+.|++++|+++.
T Consensus 187 ---------------------~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 187 ---------------------KNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp ---------------------SSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred ---------------------CCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 4444432 2 25566667777777776654
No 106
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.76 E-value=4.7e-20 Score=198.09 Aligned_cols=150 Identities=13% Similarity=0.064 Sum_probs=101.7
Q ss_pred hhhccCCCCCcccCHHHHHHHhcCCccccccCCCCce--eEEEeecCCCCccCceeeecC------CCCchhHHHHHHHH
Q 038019 634 EVLVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYG--PVYKVTANSYGYLAPEYAMRG------HLTEKADVFSFGVV 705 (866)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g--~vy~~~~gt~gY~aPE~~~~~------~~t~ksDVySfGvv 705 (866)
.++|+.....|++.+++...++.|||+++.+..+... ......+||++|||||++.+. .++.|+||||||||
T Consensus 128 ~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvv 207 (303)
T 3hmm_A 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 207 (303)
T ss_dssp CEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHH
T ss_pred CEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHH
Confidence 3455555556899989999999999999887654321 122345799999999998653 57889999999999
Q ss_pred HHHHHhcCCCCCCCchhh----h----hcHHHHHHHHhhcCCcccccCCcccc--cCHHHHHHHHHHHHHccCCCCCCCC
Q 038019 706 ALEIISGRASSDKSLDME----K----IYLLEWAWNLHENNQSFGLVDPTLTE--FNDKEALRVIGVALLCTQTSPMMRP 775 (866)
Q Consensus 706 LlEl~tg~~p~~~~~~~~----~----~~l~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~la~~C~~~~p~~RP 775 (866)
||||+||+.|+....... . ....+...... ..+.++|.++. ...+....+.+++.+||+.||++||
T Consensus 208 l~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RP 283 (303)
T 3hmm_A 208 FWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV----CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARL 283 (303)
T ss_dssp HHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH----TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSC
T ss_pred HHHHHHCCCCCCccccccccchhcccccchHHHHHHHH----hcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCc
Confidence 999999988764321100 0 00111122221 12334565532 2234566778899999999999999
Q ss_pred CHHHHHHHHhcC
Q 038019 776 PMSRVVAMLAGD 787 (866)
Q Consensus 776 sm~~V~~~L~~~ 787 (866)
||.||+++|+..
T Consensus 284 t~~ei~~~L~~l 295 (303)
T 3hmm_A 284 TALRIKKTLSQL 295 (303)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999999854
No 107
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=2.6e-18 Score=201.51 Aligned_cols=190 Identities=22% Similarity=0.265 Sum_probs=135.5
Q ss_pred EEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccC
Q 038019 67 ITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGT 146 (866)
Q Consensus 67 v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 146 (866)
+..+.+..+.+...++ +..|++|+.|+|++|.+.. ++ .|..|++|++|+|++|+|++..| +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 3334444444444333 4567788888888888864 34 47888888888888888876544 78888888888888
Q ss_pred CCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCc
Q 038019 147 NNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIP 226 (866)
Q Consensus 147 N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 226 (866)
|.+++. +.+..+++|+.|+|++|.+++. ..+..|++|+.|+|++|.+++. ..+..+++|+.|+|++|.+.+..|
T Consensus 97 N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 888753 3678888888888888888763 3577888888888888888764 567778888888888888876555
Q ss_pred hhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccC
Q 038019 227 SSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGT 272 (866)
Q Consensus 227 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 272 (866)
+..+++|+.|+|++|.+... +.+..+++|+.|+|++|.+.+.
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 77777777777777766543 3456666666666666666543
No 108
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=1.3e-18 Score=192.32 Aligned_cols=174 Identities=19% Similarity=0.216 Sum_probs=134.4
Q ss_pred EEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCcccc-CCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccC
Q 038019 68 TKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIG-NLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGT 146 (866)
Q Consensus 68 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 146 (866)
+.+++.+++++. +|..+. ..|+.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 467788887775 565554 4688999999999887777787 899999999999999887778899999999999999
Q ss_pred CCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccc---cCCCCCCeEEccCCCCCC
Q 038019 147 NNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFI---GNWTKLKSLRFQGNSFQG 223 (866)
Q Consensus 147 N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~l~~L~~L~L~~N~l~~ 223 (866)
|+++...+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99987777788888999999999888888888888888888888888888886544444 467788888888888776
Q ss_pred CCchhhcCCCCC--CEEEccCcc
Q 038019 224 PIPSSLSKLASL--ESLQMSDIY 244 (866)
Q Consensus 224 ~~p~~~~~l~~L--~~L~l~~n~ 244 (866)
..+..+..++.+ +.|+|++|.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~ 200 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNP 200 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSC
T ss_pred cCHHHhhhccHhhcceEEecCCC
Confidence 555555555442 444444443
No 109
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=7.5e-18 Score=173.55 Aligned_cols=143 Identities=20% Similarity=0.274 Sum_probs=123.1
Q ss_pred CCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcC
Q 038019 80 VIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGN 159 (866)
Q Consensus 80 ~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 159 (866)
.+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|++|++++..+..|..
T Consensus 33 ~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~ 110 (229)
T 3e6j_A 33 SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDR 110 (229)
T ss_dssp SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCc
Confidence 4555444 78999999999999888889999999999999999998766677899999999999999999877777889
Q ss_pred CCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCC
Q 038019 160 LAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPI 225 (866)
Q Consensus 160 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 225 (866)
+++|++|+|++|+++ .+|..+..+++|++|+|++|++++..+..|..+++|+.|+|++|.+....
T Consensus 111 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 111 LVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred chhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 999999999999988 67788888999999999999998777777888889999999998887543
No 110
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.76 E-value=5.1e-18 Score=181.50 Aligned_cols=168 Identities=25% Similarity=0.344 Sum_probs=143.8
Q ss_pred eeeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 64 TCHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
..+++.|++.+|.++.. + .+..+++|++|+|++|.+++..+ +.++++|++|+|++|.+++ + ..+..+++|++|+
T Consensus 45 l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-SSLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCCEEE
T ss_pred cCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C-hhhccCCCCCEEE
Confidence 34789999999998765 3 48999999999999999997544 9999999999999999985 3 4599999999999
Q ss_pred ccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCC
Q 038019 144 FGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQG 223 (866)
Q Consensus 144 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 223 (866)
|++|++++. ..+..+++|+.|+|++|++++. ..+..+++|++|++++|++++..+ +..+++|+.|+|++|.+++
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 999999874 5799999999999999999886 679999999999999999997655 8999999999999999985
Q ss_pred CCchhhcCCCCCCEEEccCccC
Q 038019 224 PIPSSLSKLASLESLQMSDIYN 245 (866)
Q Consensus 224 ~~p~~~~~l~~L~~L~l~~n~~ 245 (866)
. + .+..+++|+.|++++|.+
T Consensus 193 l-~-~l~~l~~L~~L~l~~n~i 212 (291)
T 1h6t_A 193 L-R-ALAGLKNLDVLELFSQEC 212 (291)
T ss_dssp C-G-GGTTCTTCSEEEEEEEEE
T ss_pred C-h-hhccCCCCCEEECcCCcc
Confidence 3 3 366666666666665544
No 111
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.75 E-value=2.4e-18 Score=201.88 Aligned_cols=191 Identities=19% Similarity=0.253 Sum_probs=133.4
Q ss_pred CCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEe
Q 038019 89 QYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYI 168 (866)
Q Consensus 89 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 168 (866)
..+..++|..+.+.+..+ +..|++|++|+|++|.+.. ++ .|..|++|+.|+|++|.+++..+ +..+++|+.|+|
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 345556677777765433 5678888888888888874 33 58888888888888888886544 888888888888
Q ss_pred ecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCC
Q 038019 169 DSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSS 248 (866)
Q Consensus 169 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~ 248 (866)
++|.+++. | .+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+...
T Consensus 95 s~N~l~~l-~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~ 168 (605)
T 1m9s_A 95 DENKIKDL-S-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 168 (605)
T ss_dssp CSSCCCCC-T-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCC
T ss_pred cCCCCCCC-h-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCc
Confidence 88888763 2 577888888888888888753 3577778888888888887754 5566777777777766665543
Q ss_pred CchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcc
Q 038019 249 SLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTG 295 (866)
Q Consensus 249 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 295 (866)
.. +..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+.+
T Consensus 169 ~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 169 VP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp GG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred hh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 32 55666666666666666543 235566666666666666654
No 112
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=8e-18 Score=172.13 Aligned_cols=151 Identities=17% Similarity=0.200 Sum_probs=132.5
Q ss_pred CEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecC
Q 038019 92 TVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSC 171 (866)
Q Consensus 92 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n 171 (866)
+.++++++.++ .+|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 57899999998 5676554 68999999999999877889999999999999999999888999999999999999999
Q ss_pred CCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccC
Q 038019 172 GAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYN 245 (866)
Q Consensus 172 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~ 245 (866)
+++...+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|.+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 99987777788999999999999999988888899999999999999999987777788888888877777654
No 113
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.75 E-value=1.6e-20 Score=222.20 Aligned_cols=294 Identities=15% Similarity=0.134 Sum_probs=156.5
Q ss_pred eEEEEEEcccCcCCCCCcccCCC--CCCCEEEccCCC-CCC-CCCccccCCCCcCEEeccCCcCCCC----CCccccCCC
Q 038019 66 HITKLRVYGLNKKGVIPEELVTL--QYLTVLKIDQNF-FTG-PLPSFIGNLSRLMFLSFSHNDFSGP----VPRELGNLK 137 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~p~~l~~l--~~L~~L~Ls~n~-l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~ 137 (866)
++++|+|++|.+++..+..+..+ .+|++|+|++|. ++. .++..+.++++|++|+|++|.+++. ++..+.+++
T Consensus 113 ~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~ 192 (592)
T 3ogk_B 113 QLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNT 192 (592)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCC
T ss_pred CCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCC
Confidence 56667776666555444444432 235555555543 110 0111223455555555555555433 222334445
Q ss_pred CCCEeeccCCCCCCC----CchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEe---------------------
Q 038019 138 ELTVLAFGTNNFSGA----LPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWA--------------------- 192 (866)
Q Consensus 138 ~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L--------------------- 192 (866)
+|++|+|++|.+++. ++..+.++++|+.|+|++|.+.+ +|..+.++++|++|++
T Consensus 193 ~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~ 271 (592)
T 3ogk_B 193 SLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRK 271 (592)
T ss_dssp CCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTT
T ss_pred CccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhcccc
Confidence 555555555555422 22223345555555555554443 3344444444444444
Q ss_pred ------cCCCCCCCCcccccCCCCCCeEEccCCCCCCCCc-hhhcCCCCCCEEEccCccCCCCCc-hhhhcCCCCCceec
Q 038019 193 ------SDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIP-SSLSKLASLESLQMSDIYNVSSSL-DFVMSLKNLTDLSL 264 (866)
Q Consensus 193 ------~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~n~~~~~~~-~~~~~l~~L~~L~L 264 (866)
.++. .+.+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++ +.+..... ..+..+++|++|+|
T Consensus 272 L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L 349 (592)
T 3ogk_B 272 LCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRI 349 (592)
T ss_dssp CCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEE
T ss_pred ccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEe
Confidence 3321 23456666777788888888888654333 345778888888887 33322222 23355777888888
Q ss_pred cC-----------cccccC-CCcccCCCCCcCEEeeecCcCcccCCcccCC-CCCCcEEECc----CCCCcccCCc----
Q 038019 265 RN-----------ALITGT-IPFGIGELQMLQILDLSFNNLTGQIPATLFN-IDSLEYLFLG----NNSLSGTLPD---- 323 (866)
Q Consensus 265 ~~-----------n~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~L~~L~L~----~N~l~g~~p~---- 323 (866)
++ |.+++. ++..+..+++|+.|+++.|.+++..+..+.. +++|+.|+++ .|.+++....
T Consensus 350 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~ 429 (592)
T 3ogk_B 350 ERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVR 429 (592)
T ss_dssp ECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHH
T ss_pred ecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHH
Confidence 73 455432 2222344677788888777777666665554 7777777775 5666643111
Q ss_pred ---ccCCCCCEEEeeCC--CCCCccCcccc---ccc-ccccccccccc
Q 038019 324 ---QKSENLQKIDLSHN--HLSGTFPLWVN---SEL-QMNLAVNNFKF 362 (866)
Q Consensus 324 ---~~~~~L~~L~Ls~N--~l~g~~p~~~~---~~~-~l~l~~N~~~~ 362 (866)
..+++|+.|+|++| .+++..+..+. ..+ .|++++|.++.
T Consensus 430 ~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~ 477 (592)
T 3ogk_B 430 SLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESD 477 (592)
T ss_dssp HHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSH
T ss_pred HHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCH
Confidence 12467777777643 35554443332 122 36777776653
No 114
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.75 E-value=5.5e-18 Score=187.30 Aligned_cols=176 Identities=18% Similarity=0.150 Sum_probs=144.0
Q ss_pred CEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCcccc-CCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeec
Q 038019 92 TVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELG-NLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDS 170 (866)
Q Consensus 92 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 170 (866)
+.+++++|.++ .+|..+. ..|++|+|++|+|++..+..|. ++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 58999999998 4676554 4689999999999988888887 999999999999999988888899999999999999
Q ss_pred CCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhh---cCCCCCCEEEccCccCCC
Q 038019 171 CGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSL---SKLASLESLQMSDIYNVS 247 (866)
Q Consensus 171 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~l~~n~~~~ 247 (866)
|+++...+..|..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..| ..+++|+.|+|++|.+..
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99998888889999999999999999998888899999999999999999986555555 457777777777777766
Q ss_pred CCchhhhcCCC--CCceeccCcccc
Q 038019 248 SSLDFVMSLKN--LTDLSLRNALIT 270 (866)
Q Consensus 248 ~~~~~~~~l~~--L~~L~L~~n~l~ 270 (866)
.....+..++. |+.|+|++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 55555555554 255555555554
No 115
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=9.8e-18 Score=171.47 Aligned_cols=152 Identities=16% Similarity=0.192 Sum_probs=134.8
Q ss_pred CEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCC-ccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeec
Q 038019 92 TVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVP-RELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDS 170 (866)
Q Consensus 92 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 170 (866)
+.|++++|.++ .+|..+. ..+++|+|++|+|++..| ..|..+++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 58999999998 4676554 457899999999997755 4589999999999999999988888999999999999999
Q ss_pred CCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCC
Q 038019 171 CGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNV 246 (866)
Q Consensus 171 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~ 246 (866)
|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|++++|.+.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 9999999999999999999999999999888999999999999999999999888888888888888888777654
No 116
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.73 E-value=4e-17 Score=168.11 Aligned_cols=151 Identities=19% Similarity=0.219 Sum_probs=130.9
Q ss_pred CEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecC
Q 038019 92 TVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSC 171 (866)
Q Consensus 92 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n 171 (866)
+.++.+++.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+++...+..|..+++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 35667777776 5666544 89999999999999988999999999999999999998777777899999999999999
Q ss_pred CCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCC
Q 038019 172 GAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNV 246 (866)
Q Consensus 172 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~ 246 (866)
++++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|++++..+..|..+++|+.|++++|.+.
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 999888888999999999999999998 77888899999999999999999777777888888888888777654
No 117
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=7.2e-19 Score=211.46 Aligned_cols=192 Identities=17% Similarity=0.184 Sum_probs=109.7
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCE-----EEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCC
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTV-----LKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKEL 139 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~-----L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 139 (866)
.+++.|+|.++++... +..+.....|+. ++++.|.+. ..+..|..+++|+.|+|++|.+. .+|..+.++++|
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCcc-hhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 5688999988887763 333322222222 233334443 45777888888888888888887 677777788888
Q ss_pred CEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCC
Q 038019 140 TVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGN 219 (866)
Q Consensus 140 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 219 (866)
++|+|++|.|+ .+|..|++|++|++|+|++|.++ .+|..|++|++|++|+|++|.|+ .+|..|+++++|+.|+|++|
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTS
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCC
Confidence 88888888888 77888888888888888888888 66888888888888888888887 67777888888888888888
Q ss_pred CCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecC
Q 038019 220 SFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFN 291 (866)
Q Consensus 220 ~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 291 (866)
.|++.+|..+..+.. .+..|+|++|.+++.+|.. |..|+++.|
T Consensus 327 ~l~~~~p~~~~~~~~-----------------------~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 327 PLEKQFLKILTEKSV-----------------------TGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp CCCSHHHHHHHHHHH-----------------------HHHHHHHHHCCCCCCCCCC---------------
T ss_pred ccCCCChHHHhhcch-----------------------hhhHHhhccCcccCcCccc------cceeEeecc
Confidence 888777766543210 1123567788887777653 455566655
No 118
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=2.3e-17 Score=165.67 Aligned_cols=153 Identities=18% Similarity=0.153 Sum_probs=92.6
Q ss_pred CCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccE
Q 038019 86 VTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQ 165 (866)
Q Consensus 86 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 165 (866)
..+++|+.|+|++|.++ .+| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|.+++..+..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44556666666666665 344 4666666666666666543 2235666666666666666666555566666666666
Q ss_pred EEeecCCCCCCChhhhhcCcCCCEEEecCCC-CCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCcc
Q 038019 166 LYIDSCGAGGEIPSTFAKLRNMQTLWASDNP-FTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIY 244 (866)
Q Consensus 166 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~ 244 (866)
|+|++|++++..|..+..+++|++|++++|. ++ .+| .+..+++|+.|++++|.+++. + .+..+++|+.|++++|.
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcc
Confidence 6666666666666666666666666666666 43 344 466666666666666666642 2 56666666666666665
Q ss_pred CC
Q 038019 245 NV 246 (866)
Q Consensus 245 ~~ 246 (866)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 43
No 119
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=2.5e-17 Score=165.45 Aligned_cols=150 Identities=18% Similarity=0.191 Sum_probs=71.0
Q ss_pred eEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeecc
Q 038019 66 HITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFG 145 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 145 (866)
+++.|++++|.++ .+| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|.+++..|..|+.+++|++|+|+
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 4445555555444 233 3445555555555555443 12244455555555555555554444445555555555555
Q ss_pred CCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCC
Q 038019 146 TNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQ 222 (866)
Q Consensus 146 ~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 222 (866)
+|.+++..|..++.+++|++|+|++|...+.+| .+..+++|++|++++|.+++. + .+..+++|+.|++++|++.
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC---
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcccC
Confidence 555554444455555555555555554222223 344555555555555555432 2 3444555555555555443
No 120
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.70 E-value=2e-18 Score=186.27 Aligned_cols=142 Identities=18% Similarity=0.168 Sum_probs=93.6
Q ss_pred hhccCCCCCcccCHHHH-HHHhcCCccccccCCCCceeEE---EeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHH
Q 038019 635 VLVGIGSKPNIFGYAEL-RSATKDFNRSNKLGEGGYGPVY---KVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEII 710 (866)
Q Consensus 635 ~~~~~~~~~~~~~~~~~-~~~~~dF~~~~~lg~g~~g~vy---~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~ 710 (866)
++|++.+..|++...+. ..++.|||+++.+...+.+... ...+||+.|||||.+.+..++.++|||||||++|||+
T Consensus 171 IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyeml 250 (336)
T 4g3f_A 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 250 (336)
T ss_dssp EECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHH
Confidence 34444444477776665 5789999999998766544322 2347999999999999999999999999999999999
Q ss_pred hcCCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 711 SGRASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 711 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
||+.||......+ +...+.. .. +.+.+.+......+.++..+|++.||++|||+.|+++.|.....
T Consensus 251 tG~~Pf~~~~~~~---~~~~i~~---~~-------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 251 NGCHPWTQYFRGP---LCLKIAS---EP-------PPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp HSSCSSTTTCCSC---CHHHHHH---SC-------CGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HCcCCCCCCCHHH---HHHHHHc---CC-------CCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 9999997544322 2211111 10 11111111112234455669999999999999999998875443
No 121
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.69 E-value=5.7e-20 Score=214.36 Aligned_cols=118 Identities=24% Similarity=0.262 Sum_probs=62.2
Q ss_pred CCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccC
Q 038019 187 MQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRN 266 (866)
Q Consensus 187 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~ 266 (866)
|+.|+|++|.+++ +|. ++.+++|+.|+|++|.++ .+|..|+++++|+.|+ |++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~------------------------Ls~ 495 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQ------------------------ASD 495 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEE------------------------CCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEE------------------------CCC
Confidence 5555555555553 343 555555555555555555 4455555544444444 444
Q ss_pred cccccCCCcccCCCCCcCEEeeecCcCcccC-CcccCCCCCCcEEECcCCCCcccCCcc-----cCCCCCEEE
Q 038019 267 ALITGTIPFGIGELQMLQILDLSFNNLTGQI-PATLFNIDSLEYLFLGNNSLSGTLPDQ-----KSENLQKID 333 (866)
Q Consensus 267 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~g~~p~~-----~~~~L~~L~ 333 (866)
|.+++ +| .++.+++|+.|+|++|+|++.. |..+..+++|+.|+|++|++++..|.. .+++|+.|+
T Consensus 496 N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 496 NALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp SCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 44443 33 4555555555555555555544 555555566666666666655544321 135555554
No 122
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.68 E-value=1.5e-17 Score=180.75 Aligned_cols=154 Identities=32% Similarity=0.429 Sum_probs=124.6
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASS 716 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~ 716 (866)
|......|++...+...++.|||.++..+............||.+|+|||.+..+.++.++|||||||+++||+||+.|+
T Consensus 162 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~ 241 (321)
T 2qkw_B 162 HRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241 (321)
T ss_dssp CSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTC
T ss_pred cCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcc
Confidence 33334447777777778899999998765443333334456899999999999999999999999999999999999999
Q ss_pred CCCchhhhhcHHHHHHHHhhcCCcccccCCccc-ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 717 DKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLT-EFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 717 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
....+.+.....+|.......+...+++++.+. ....+....+.+++..|++.||++||+|.||++.|+...+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 242 VQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp SCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 876666667788888887777878888888774 45667778888999999999999999999999999965544
No 123
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.68 E-value=9.7e-19 Score=206.92 Aligned_cols=248 Identities=15% Similarity=0.136 Sum_probs=150.4
Q ss_pred eeEEEEEEcccCcCCCCCcccC-CCCCCCEEEccCC-CCCCC-CCccccCCCCcCEEeccCCcCCCCCCcccc----CCC
Q 038019 65 CHITKLRVYGLNKKGVIPEELV-TLQYLTVLKIDQN-FFTGP-LPSFIGNLSRLMFLSFSHNDFSGPVPRELG----NLK 137 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~-~l~~L~~L~Ls~n-~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~----~l~ 137 (866)
.++++|+++++.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 3688899998888777666665 6889999999888 55432 444455788999999999988765544443 667
Q ss_pred CCCEeeccCCC--CCCC-CchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCC------------------
Q 038019 138 ELTVLAFGTNN--FSGA-LPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNP------------------ 196 (866)
Q Consensus 138 ~L~~L~Ls~N~--l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~------------------ 196 (866)
+|++|+|++|. ++.. ++..+..+++|++|+|++|...+.++..+..+++|++|+++.+.
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~ 264 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGC 264 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTC
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcC
Confidence 89999998886 2211 11123456888888888873322356666667777777654431
Q ss_pred --------CCC----CCcccccCCCCCCeEEccCCCCCCCC-chhhcCCCCCCEEEccCccCCCCCch-hhhcCCCCCce
Q 038019 197 --------FTG----KIPDFIGNWTKLKSLRFQGNSFQGPI-PSSLSKLASLESLQMSDIYNVSSSLD-FVMSLKNLTDL 262 (866)
Q Consensus 197 --------l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~n~~~~~~~~-~~~~l~~L~~L 262 (866)
+.. .++..+..+++|++|+|++|.+++.. ...+.++++|+.|++++| +...... ....+++|+.|
T Consensus 265 ~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L 343 (594)
T 2p1m_B 265 KELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLREL 343 (594)
T ss_dssp TTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEE
T ss_pred CCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEE
Confidence 111 13333335677888888888765432 223557777888877765 2211122 22346677777
Q ss_pred eccC---------cccccCCCccc-CCCCCcCEEeeecCcCcccCCcccC-CCCCCcEEECc
Q 038019 263 SLRN---------ALITGTIPFGI-GELQMLQILDLSFNNLTGQIPATLF-NIDSLEYLFLG 313 (866)
Q Consensus 263 ~L~~---------n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~L~ 313 (866)
+|.+ +.+++.....+ ..+++|+.|.+..|.+++.....+. .+++|+.|+|+
T Consensus 344 ~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 344 RVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp EEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred EEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 6632 33333221122 2256666666666666654444443 35666666666
No 124
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.67 E-value=9.2e-17 Score=169.01 Aligned_cols=168 Identities=20% Similarity=0.261 Sum_probs=89.0
Q ss_pred eEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeecc
Q 038019 66 HITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFG 145 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 145 (866)
+++.+++.++.++... .+..+++|++|++++|.++. ++ .+..+++|++|+|++|++++..+ +.++++|++|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 3444445555554332 35556666666666666652 33 45566666666666666654333 5666666666666
Q ss_pred CCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCC
Q 038019 146 TNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPI 225 (866)
Q Consensus 146 ~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 225 (866)
+|++++. |. +.. ++|++|+|++|++++. ..+..+++|+.|+|++|++++. + .+..+++|+.|+|++|++++.
T Consensus 94 ~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 94 RNRLKNL-NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp SSCCSCC-TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-
T ss_pred CCccCCc-Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-
Confidence 6666542 22 222 5555555555555542 2355555555555555555532 2 344555555555555555433
Q ss_pred chhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccC
Q 038019 226 PSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGT 272 (866)
Q Consensus 226 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 272 (866)
..+..+++|+.|++++|.+++.
T Consensus 166 -------------------------~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 -------------------------GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -------------------------TTSTTCCCCCEEEEEEEEEECC
T ss_pred -------------------------HHhccCCCCCEEeCCCCcccCC
Confidence 3344555666666666666544
No 125
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.67 E-value=1.7e-19 Score=210.24 Aligned_cols=202 Identities=18% Similarity=0.131 Sum_probs=133.4
Q ss_pred cCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCE
Q 038019 110 GNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQT 189 (866)
Q Consensus 110 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 189 (866)
..+++|+.|+|++|+++ .+|.++++|++|+.|++++|.....+|.. +..+...+..|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l-----------l~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL-----------MRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----------HHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH-----------HHhcccccCCHHHHHHHHhccc
Confidence 45566666666666665 56666666666666666544310000000 0112244555666666666666
Q ss_pred EE-ecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcc
Q 038019 190 LW-ASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNAL 268 (866)
Q Consensus 190 L~-L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~ 268 (866)
|+ ++.|.+ .+|..+.+.+|.+....+ ..|+.|+|++|.+...+ .+..+++|+.|+|++|.
T Consensus 414 L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~lp--~~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVLC--HLEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSCC--CGGGGTTCCEEECCSSC
T ss_pred Ccchhhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCCCCc--CccccccCcEeecCccc
Confidence 65 444422 233344444444432111 13555666665554432 26667778888888888
Q ss_pred cccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccC-Cccc--CCCCCEEEeeCCCCCCccCc
Q 038019 269 ITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTL-PDQK--SENLQKIDLSHNHLSGTFPL 345 (866)
Q Consensus 269 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~-p~~~--~~~L~~L~Ls~N~l~g~~p~ 345 (866)
++ .+|..++.+++|+.|+|++|.|++ +| .+..+++|+.|+|++|++++.. |... +++|+.|+|++|++++..|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 88 778899999999999999999997 66 8999999999999999999886 6654 58999999999999987664
No 126
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.66 E-value=9.9e-17 Score=168.76 Aligned_cols=149 Identities=20% Similarity=0.232 Sum_probs=62.3
Q ss_pred ccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCC
Q 038019 133 LGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLK 212 (866)
Q Consensus 133 l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 212 (866)
+..+++|++|++++|.++. ++ .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++ +|.. .. ++|+
T Consensus 37 ~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~ 109 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLS 109 (263)
T ss_dssp HHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCC
T ss_pred hhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-Cccc
Confidence 3334444444444444432 22 34444444444444444443322 4444445555555554443 2221 11 4555
Q ss_pred eEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCc
Q 038019 213 SLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNN 292 (866)
Q Consensus 213 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 292 (866)
.|+|++|++++. ..+..+++|+.|++++|.+... +.+..+++|+.|+|++|.+++. ..+..+++|+.|++++|.
T Consensus 110 ~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~--~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 110 RLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI--VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp EEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC--GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEE
T ss_pred EEEccCCccCCC--hhhcCcccccEEECCCCcCCCC--hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCc
Confidence 555555555532 2344444444444444433221 1233344444444444444433 233344444444444444
Q ss_pred Cc
Q 038019 293 LT 294 (866)
Q Consensus 293 l~ 294 (866)
++
T Consensus 184 ~~ 185 (263)
T 1xeu_A 184 CV 185 (263)
T ss_dssp EE
T ss_pred cc
Confidence 33
No 127
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.66 E-value=3.1e-16 Score=156.66 Aligned_cols=132 Identities=21% Similarity=0.314 Sum_probs=96.6
Q ss_pred eEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCc-cccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 66 HITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPS-FIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
..+.|++++++++ .+|..+.. +|++|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 9 ~~~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 85 (192)
T 1w8a_A 9 EGTTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQL 85 (192)
T ss_dssp ETTEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEEC
Confidence 3457778887774 56665543 788888888888766554 4778888888888888888777778888888888888
Q ss_pred cCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCC
Q 038019 145 GTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGK 200 (866)
Q Consensus 145 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 200 (866)
++|++++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++.
T Consensus 86 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 86 GENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 88888777776677777777777777777776666666666666666666666644
No 128
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.65 E-value=2.6e-17 Score=197.85 Aligned_cols=160 Identities=20% Similarity=0.261 Sum_probs=125.2
Q ss_pred eEEEEEEcccCcCC---------CCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCC
Q 038019 66 HITKLRVYGLNKKG---------VIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNL 136 (866)
Q Consensus 66 ~v~~L~l~~~~l~~---------~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 136 (866)
.+..++|+.+.+.+ ..+..|..+..|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|++|
T Consensus 192 ~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 269 (727)
T 4b8c_D 192 LLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNL 269 (727)
T ss_dssp ------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGG
T ss_pred HhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCC
Confidence 44556666655543 34778999999999999999998 67878889999999999999999 899999999
Q ss_pred CCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCC-CCeEE
Q 038019 137 KELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTK-LKSLR 215 (866)
Q Consensus 137 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~ 215 (866)
++|++|+|++|.|+ .+|..|++|++|++|+|++|.++ .+|..|++|++|++|+|++|.+++.+|..+..+.. +..|+
T Consensus 270 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~ 347 (727)
T 4b8c_D 270 SNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFY 347 (727)
T ss_dssp TTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHh
Confidence 99999999999999 77999999999999999999997 67888999999999999999999999988865432 23578
Q ss_pred ccCCCCCCCCchhh
Q 038019 216 FQGNSFQGPIPSSL 229 (866)
Q Consensus 216 L~~N~l~~~~p~~~ 229 (866)
|++|.+++.+|..+
T Consensus 348 l~~N~l~~~~p~~l 361 (727)
T 4b8c_D 348 LRDNRPEIPLPHER 361 (727)
T ss_dssp HHHCCCCCCCCCC-
T ss_pred hccCcccCcCcccc
Confidence 99999998887543
No 129
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.65 E-value=8.9e-17 Score=170.27 Aligned_cols=130 Identities=15% Similarity=0.186 Sum_probs=87.5
Q ss_pred hhccCCCCCcccCH-HHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcC
Q 038019 635 VLVGIGSKPNIFGY-AELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGR 713 (866)
Q Consensus 635 ~~~~~~~~~~~~~~-~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~ 713 (866)
++|+..+..|++.. .+...++.|||+++..... . .+..+||+.|||||.+. ++++.++|||||||+||||+||+
T Consensus 152 IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~-~---~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~ 226 (290)
T 3fpq_A 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-F---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSE 226 (290)
T ss_dssp CCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT-S---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EEecccChhheeEECCCCCEEEEeCcCCEeCCCC-c---cCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCC
Confidence 34444444477765 3567899999999865432 2 34568999999999875 57999999999999999999999
Q ss_pred CCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 714 ASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 714 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.||....... .+ ......+.. .+........+ +.++..+|++.||++|||+.|+++
T Consensus 227 ~Pf~~~~~~~--~~----~~~i~~~~~----~~~~~~~~~~~---~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 227 YPYSECQNAA--QI----YRRVTSGVK----PASFDKVAIPE---VKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CTTTTCSSHH--HH----HHHHTTTCC----CGGGGGCCCHH---HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCCCCcHH--HH----HHHHHcCCC----CCCCCccCCHH---HHHHHHHHccCChhHCcCHHHHhc
Confidence 9996433211 11 122222111 11111112223 445666999999999999999864
No 130
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.65 E-value=9.4e-18 Score=198.43 Aligned_cols=295 Identities=16% Similarity=0.106 Sum_probs=192.3
Q ss_pred eeEEEEEEccc-CcCCC-CCcccCCCCCCCEEEccCCCCCCCCCcccc----CCCCcCEEeccCCc--CCCC-CCccccC
Q 038019 65 CHITKLRVYGL-NKKGV-IPEELVTLQYLTVLKIDQNFFTGPLPSFIG----NLSRLMFLSFSHND--FSGP-VPRELGN 135 (866)
Q Consensus 65 ~~v~~L~l~~~-~l~~~-~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~----~l~~L~~L~Ls~N~--l~~~-~p~~l~~ 135 (866)
.++++|++.+| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++|+|++|. ++.. ++..+.+
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~ 209 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTR 209 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHh
Confidence 47888888887 44432 444445788888888888887665444333 56688888888776 2110 1111234
Q ss_pred CCCCCEeeccCCC--------------------------------------------------CCCC----CchhhcCCC
Q 038019 136 LKELTVLAFGTNN--------------------------------------------------FSGA----LPPELGNLA 161 (866)
Q Consensus 136 l~~L~~L~Ls~N~--------------------------------------------------l~~~----~p~~l~~l~ 161 (866)
+++|++|+|++|. +... ++..+..++
T Consensus 210 ~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~ 289 (594)
T 2p1m_B 210 CPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCS 289 (594)
T ss_dssp CTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHT
T ss_pred CCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhC
Confidence 5777777777651 1111 222233578
Q ss_pred CccEEEeecCCCCCCC-hhhhhcCcCCCEEEecCCCCCCC-CcccccCCCCCCeEEccC---------CCCCCCCchhhc
Q 038019 162 KLEQLYIDSCGAGGEI-PSTFAKLRNMQTLWASDNPFTGK-IPDFIGNWTKLKSLRFQG---------NSFQGPIPSSLS 230 (866)
Q Consensus 162 ~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~---------N~l~~~~p~~~~ 230 (866)
+|++|+|++|.++... ...+..+++|++|++++| ++.. ++.....+++|+.|+|.. +.+++.....+.
T Consensus 290 ~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~ 368 (594)
T 2p1m_B 290 RLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVS 368 (594)
T ss_dssp TCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHH
T ss_pred CCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHH
Confidence 9999999999976543 333668999999999988 4322 233334588999999843 445433223333
Q ss_pred -CCCCCCEEEccCccCCCCCchhhh-cCCCCCceecc--C----cccccC-----CCcccCCCCCcCEEeeecCcCcccC
Q 038019 231 -KLASLESLQMSDIYNVSSSLDFVM-SLKNLTDLSLR--N----ALITGT-----IPFGIGELQMLQILDLSFNNLTGQI 297 (866)
Q Consensus 231 -~l~~L~~L~l~~n~~~~~~~~~~~-~l~~L~~L~L~--~----n~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~ 297 (866)
.+++|+.|.+..+.+.......+. .+++|+.|+|+ + +.+++. ++..+..+++|+.|+|++ .+++..
T Consensus 369 ~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~ 447 (594)
T 2p1m_B 369 MGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKV 447 (594)
T ss_dssp HHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHH
T ss_pred HhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHH
Confidence 488999998877776654444444 58999999998 3 455522 122356778999999977 676665
Q ss_pred CcccCC-CCCCcEEECcCCCCcccCCcc---cCCCCCEEEeeCCCCCCccCccc----cccccccccccccc
Q 038019 298 PATLFN-IDSLEYLFLGNNSLSGTLPDQ---KSENLQKIDLSHNHLSGTFPLWV----NSELQMNLAVNNFK 361 (866)
Q Consensus 298 p~~l~~-l~~L~~L~L~~N~l~g~~p~~---~~~~L~~L~Ls~N~l~g~~p~~~----~~~~~l~l~~N~~~ 361 (866)
+..+.. +++|+.|+|++|.+++..+.. .+++|+.|+|++|++++..+..+ .....|++++|.++
T Consensus 448 ~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 448 FEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred HHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 555655 889999999999987543332 25789999999999965443322 22234888888874
No 131
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.65 E-value=5.3e-17 Score=175.63 Aligned_cols=131 Identities=17% Similarity=0.222 Sum_probs=92.9
Q ss_pred hhccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCC
Q 038019 635 VLVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRA 714 (866)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~ 714 (866)
++|++.+..|++...+...|+.|||+++.+.... ......+||+.|||||.+....|+.++||||+||+++||+||+.
T Consensus 191 IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~ 268 (346)
T 4fih_A 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 268 (346)
T ss_dssp EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred cccccCCHHHEEECCCCCEEEecCcCceecCCCC--CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 3344344447887777788999999999886543 23345689999999999999999999999999999999999999
Q ss_pred CCCCCchhhhhcHHHHHHHHhhcCCcccccCCccc--ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 715 SSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLT--EFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 715 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~--~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
||......+ +...+.. + ..+.+. ....++ +.++..+|++.||++|||+.|+++
T Consensus 269 PF~~~~~~~---~~~~i~~----~-----~~~~~~~~~~~s~~---~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 269 PYFNEPPLK---AMKMIRD----N-----LPPRLKNLHKVSPS---LKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp TTTTSCHHH---HHHHHHH----S-----SCCCCSCGGGSCHH---HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCCcCHHH---HHHHHHc----C-----CCCCCCccccCCHH---HHHHHHHHcCCChhHCcCHHHHhc
Confidence 997543322 2222211 1 122221 111223 344556999999999999999864
No 132
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.64 E-value=5.8e-16 Score=154.70 Aligned_cols=132 Identities=19% Similarity=0.242 Sum_probs=110.1
Q ss_pred CEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCc-cccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeec
Q 038019 92 TVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPR-ELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDS 170 (866)
Q Consensus 92 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 170 (866)
++|++++|.++ .+|..+.. +|++|+|++|+|++..+. .|+.+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 78899999986 57765543 889999999999876664 488899999999999999888888888888999999988
Q ss_pred CCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCc
Q 038019 171 CGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIP 226 (866)
Q Consensus 171 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 226 (866)
|++++..+..|.++++|++|+|++|++++..|..+..+++|++|+|++|.+.+..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 88888888888888888888888888888888888888888888888888876543
No 133
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=6.5e-16 Score=150.71 Aligned_cols=132 Identities=18% Similarity=0.144 Sum_probs=83.6
Q ss_pred CCCCEEEccCCCCC-CCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEE
Q 038019 89 QYLTVLKIDQNFFT-GPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLY 167 (866)
Q Consensus 89 ~~L~~L~Ls~n~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 167 (866)
++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56677777777766 55666666677777777777776644 5566666667777666666665666666666666666
Q ss_pred eecCCCCCCC-hhhhhcCcCCCEEEecCCCCCCCCc---ccccCCCCCCeEEccCCCCC
Q 038019 168 IDSCGAGGEI-PSTFAKLRNMQTLWASDNPFTGKIP---DFIGNWTKLKSLRFQGNSFQ 222 (866)
Q Consensus 168 L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~~N~l~ 222 (866)
|++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 6666665532 2556666666666666666664433 35556666666666666554
No 134
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.63 E-value=8.7e-18 Score=182.06 Aligned_cols=131 Identities=16% Similarity=0.215 Sum_probs=92.7
Q ss_pred hhccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCC
Q 038019 635 VLVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRA 714 (866)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~ 714 (866)
++|+..+..|++..++...++.|||+++.+..+. ...+..+||+.|||||.+.+..|+.++||||+||+||||+||+.
T Consensus 146 IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~ 223 (350)
T 4b9d_A 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV--ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH 223 (350)
T ss_dssp CEETTCCGGGEEECTTCCEEECSTTEESCCCHHH--HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred eeeccCCHHHEEECCCCCEEEcccccceeecCCc--ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 3444444448888777788999999999886432 22234579999999999999999999999999999999999999
Q ss_pred CCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 715 SSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 715 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
||......+ +. ..... +.. |.+.....++ +.++..+|++.||++|||+.|+++
T Consensus 224 PF~~~~~~~---~~---~~i~~-~~~-----~~~~~~~s~~---~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 224 AFEAGSMKN---LV---LKIIS-GSF-----PPVSLHYSYD---LRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp SCCCSSHHH---HH---HHHHH-TCC-----CCCCTTSCHH---HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCcCHHH---HH---HHHHc-CCC-----CCCCccCCHH---HHHHHHHHccCChhHCcCHHHHhc
Confidence 997543221 22 12111 111 1111111223 445566999999999999999975
No 135
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.63 E-value=9.9e-17 Score=174.54 Aligned_cols=147 Identities=37% Similarity=0.584 Sum_probs=119.4
Q ss_pred CCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 640 GSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 640 ~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
....|++...+...++.|||.+..+..... .......||++|+|||.+..+.++.++|||||||+++||+||+.|++..
T Consensus 160 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 238 (326)
T 3uim_A 160 VKAANILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 238 (326)
T ss_dssp CSGGGEEECTTCCEEECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHH
T ss_pred CchhhEEECCCCCEEeccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccc
Confidence 333477777777788999999988765432 3444556999999999999999999999999999999999999998632
Q ss_pred c--hhhhhcHHHHHHHHhhcCCcccccCCcc-cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 720 L--DMEKIYLLEWAWNLHENNQSFGLVDPTL-TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 720 ~--~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
. ......+.+|+...........++++.+ .....+....+.+++..|++.+|++||||.||+++|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 239 RLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred ccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 1 1234567888888777777777888777 356777888899999999999999999999999999964
No 136
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=6.2e-16 Score=147.61 Aligned_cols=125 Identities=18% Similarity=0.166 Sum_probs=54.6
Q ss_pred cCEEeccCCcCC-CCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEec
Q 038019 115 LMFLSFSHNDFS-GPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWAS 193 (866)
Q Consensus 115 L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 193 (866)
|++|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+++
T Consensus 19 l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls 96 (149)
T 2je0_A 19 VKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLS 96 (149)
T ss_dssp CSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECT
T ss_pred CeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECC
Confidence 333333333333 33333333334444444444443332 333444444444444444444444444444444444444
Q ss_pred CCCCCCC-CcccccCCCCCCeEEccCCCCCCCCc---hhhcCCCCCCEEEcc
Q 038019 194 DNPFTGK-IPDFIGNWTKLKSLRFQGNSFQGPIP---SSLSKLASLESLQMS 241 (866)
Q Consensus 194 ~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~l~ 241 (866)
+|.+++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 97 ~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 97 GNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 4444432 22444455555555555555544333 344555555555443
No 137
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.61 E-value=2.5e-15 Score=146.55 Aligned_cols=134 Identities=19% Similarity=0.133 Sum_probs=114.9
Q ss_pred CCCCcCEEeccCCcCC-CCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCE
Q 038019 111 NLSRLMFLSFSHNDFS-GPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQT 189 (866)
Q Consensus 111 ~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 189 (866)
..++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999998 78898899999999999999999876 78899999999999999999888888888999999
Q ss_pred EEecCCCCCCCC-cccccCCCCCCeEEccCCCCCCCCc---hhhcCCCCCCEEEccCccCC
Q 038019 190 LWASDNPFTGKI-PDFIGNWTKLKSLRFQGNSFQGPIP---SSLSKLASLESLQMSDIYNV 246 (866)
Q Consensus 190 L~L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~l~~n~~~ 246 (866)
|+|++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|+.|++++|...
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 999999998642 2788889999999999999986655 46777777877777776553
No 138
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.61 E-value=1.9e-16 Score=175.58 Aligned_cols=131 Identities=17% Similarity=0.222 Sum_probs=93.4
Q ss_pred hhccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCC
Q 038019 635 VLVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRA 714 (866)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~ 714 (866)
++|++....|++...+...++.|||+++.+.... ......+||+.|||||.+....|+.++||||+||+++||+||+.
T Consensus 268 IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~ 345 (423)
T 4fie_A 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 345 (423)
T ss_dssp EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred eecccCCHHHEEEcCCCCEEEecCccceECCCCC--ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 3444444458888888888999999999886543 22345679999999999999999999999999999999999999
Q ss_pred CCCCCchhhhhcHHHHHHHHhhcCCcccccCCccc--ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 715 SSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLT--EFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 715 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~--~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
||......+ +...+. .+ ..+.+. ....++ +.++..+|++.||++|||+.|+++
T Consensus 346 PF~~~~~~~---~~~~i~----~~-----~~~~~~~~~~~s~~---~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 346 PYFNEPPLK---AMKMIR----DN-----LPPRLKNLHKVSPS---LKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TTTTSCHHH---HHHHHH----HS-----CCCCCSCTTSSCHH---HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCCcCHHH---HHHHHH----cC-----CCCCCcccccCCHH---HHHHHHHHcCCChhHCcCHHHHhc
Confidence 997543322 222221 11 112221 111223 344556999999999999999865
No 139
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=1.5e-15 Score=144.95 Aligned_cols=129 Identities=19% Similarity=0.177 Sum_probs=116.9
Q ss_pred CCCCCEEEccCCCCC-CCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEE
Q 038019 88 LQYLTVLKIDQNFFT-GPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQL 166 (866)
Q Consensus 88 l~~L~~L~Ls~n~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 166 (866)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 468999999999998 78898899999999999999999876 789999999999999999998889888899999999
Q ss_pred EeecCCCCCC-ChhhhhcCcCCCEEEecCCCCCCCCc---ccccCCCCCCeEEccC
Q 038019 167 YIDSCGAGGE-IPSTFAKLRNMQTLWASDNPFTGKIP---DFIGNWTKLKSLRFQG 218 (866)
Q Consensus 167 ~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~~ 218 (866)
+|++|.+++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999874 45889999999999999999997665 5789999999999864
No 140
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=3.6e-15 Score=148.95 Aligned_cols=127 Identities=24% Similarity=0.325 Sum_probs=86.1
Q ss_pred EEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCC
Q 038019 68 TKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTN 147 (866)
Q Consensus 68 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 147 (866)
+.+++++++++ .+|..+. ++|++|+|++|.|+ .+|..|.++++|++|+|++|.|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45667777666 3554443 46777777777776 56677777777777777777777666667777777777777777
Q ss_pred CCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCC
Q 038019 148 NFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFT 198 (866)
Q Consensus 148 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 198 (866)
.+++..|..|..+++|++|+|++|.++...+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 777666666666667777766666666555555666666666666666554
No 141
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.60 E-value=1.2e-16 Score=170.24 Aligned_cols=130 Identities=10% Similarity=0.081 Sum_probs=93.1
Q ss_pred hccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCC
Q 038019 636 LVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRAS 715 (866)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p 715 (866)
+|+..+..|++..++...++.|||+++.+..++........+||+.|||||.+.+..++.++||||+||+|+||+||+.|
T Consensus 154 iHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~P 233 (311)
T 4aw0_A 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233 (311)
T ss_dssp ECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 33333344788777788899999999998755444444556899999999999999999999999999999999999999
Q ss_pred CCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 038019 716 SDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVV 781 (866)
Q Consensus 716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~ 781 (866)
|...... .+...+. .+. +.+.+...++ +.++..+|++.||++|||+.|+.
T Consensus 234 F~~~~~~---~~~~~i~----~~~------~~~p~~~s~~---~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 234 FRAGNEG---LIFAKII----KLE------YDFPEKFFPK---ARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp SCCSSHH---HHHHHHH----HTC------CCCCTTCCHH---HHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CCCCCHH---HHHHHHH----cCC------CCCCcccCHH---HHHHHHHHccCCHhHCcChHHHc
Confidence 9754322 2222221 111 1121111223 34456699999999999999864
No 142
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.60 E-value=4.3e-16 Score=163.55 Aligned_cols=129 Identities=22% Similarity=0.256 Sum_probs=81.5
Q ss_pred hhccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCC-CchhHHHHHHHHHHHHHhcC
Q 038019 635 VLVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHL-TEKADVFSFGVVALEIISGR 713 (866)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~-t~ksDVySfGvvLlEl~tg~ 713 (866)
++|+..+..|++..++...++.|||+++.+..+.. .....||+.|||||.+.+..+ +.++||||+||+++||+||+
T Consensus 133 IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~---~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~ 209 (275)
T 3hyh_A 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209 (275)
T ss_dssp CCCCCCCTTTEEECTTCCEEECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccccCChHHeEECCCCCEEEeecCCCeecCCCCc---cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCC
Confidence 34444444588887777889999999998876543 344679999999999987765 58999999999999999999
Q ss_pred CCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 714 ASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 714 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.||...... .+.+. ...+. +.++....++ +.++..+|++.||++|||+.|+++
T Consensus 210 ~PF~~~~~~---~~~~~----i~~~~------~~~p~~~s~~---~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 210 LPFDDESIP---VLFKN----ISNGV------YTLPKFLSPG---AAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CSSCCSSHH---HHHHH----HHHTC------CCCCTTSCHH---HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCCCCHH---HHHHH----HHcCC------CCCCCCCCHH---HHHHHHHHccCChhHCcCHHHHHc
Confidence 999754321 12211 11121 1111212233 344556999999999999999986
No 143
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=8.5e-15 Score=144.08 Aligned_cols=132 Identities=20% Similarity=0.308 Sum_probs=87.6
Q ss_pred EEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccC
Q 038019 67 ITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGT 146 (866)
Q Consensus 67 v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 146 (866)
.+.+++.+++++. +|..+ .++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3455556666553 44333 25778888888887766666677777788888888777766666677777777777777
Q ss_pred CCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCC
Q 038019 147 NNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKI 201 (866)
Q Consensus 147 N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 201 (866)
|++++..+..+..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 7777665556666677777777766666555555566666666666666665443
No 144
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=8.4e-15 Score=146.26 Aligned_cols=128 Identities=23% Similarity=0.290 Sum_probs=107.8
Q ss_pred CEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecC
Q 038019 92 TVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSC 171 (866)
Q Consensus 92 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n 171 (866)
+++++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 57899999987 5676553 68999999999998 67788999999999999999999888888889999999999999
Q ss_pred CCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCC
Q 038019 172 GAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQG 223 (866)
Q Consensus 172 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 223 (866)
++++..|..|..+++|++|+|++|+++...+..|..+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9888888888888888888888888886666677888888888888887763
No 145
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.58 E-value=3.5e-16 Score=166.55 Aligned_cols=124 Identities=20% Similarity=0.187 Sum_probs=84.2
Q ss_pred hccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCC
Q 038019 636 LVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRAS 715 (866)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p 715 (866)
+|+.....|++..++...++.|||+++.+.... ......+||+.|||||.+....++.++||||+||+|+||+||+.|
T Consensus 148 iHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~P 225 (304)
T 3ubd_A 148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225 (304)
T ss_dssp CCSSCCGGGEEECTTSCEEEESSEEEEC-------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cCCCCCHHHeEEcCCCCEEecccccceeccCCC--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCC
Confidence 333334447887777788999999998764432 122345799999999999999999999999999999999999999
Q ss_pred CCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCH
Q 038019 716 SDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPM 777 (866)
Q Consensus 716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm 777 (866)
|......+ +...+. .+. +........+ +.++..+|++.||++|||.
T Consensus 226 F~~~~~~~---~~~~i~----~~~------~~~p~~~s~~---~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 226 FQGKDRKE---TMTMIL----KAK------LGMPQFLSPE---AQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp SCCSSHHH---HHHHHH----HCC------CCCCTTSCHH---HHHHHHHHTCSSGGGSTTC
T ss_pred CCCcCHHH---HHHHHH----cCC------CCCCCcCCHH---HHHHHHHHcccCHHHCCCC
Confidence 97643322 222111 111 1111112233 4445669999999999984
No 146
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.58 E-value=1.5e-14 Score=142.27 Aligned_cols=133 Identities=20% Similarity=0.242 Sum_probs=110.6
Q ss_pred CCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeec
Q 038019 91 LTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDS 170 (866)
Q Consensus 91 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 170 (866)
.+.+++++|.++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..+..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 478899999887 455443 36899999999999877777788999999999999999877777788899999999999
Q ss_pred CCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCc
Q 038019 171 CGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIP 226 (866)
Q Consensus 171 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 226 (866)
|.+++..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|.+.+..+
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99988877778888999999999998887666667888888999999888886544
No 147
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.56 E-value=4e-15 Score=162.07 Aligned_cols=120 Identities=15% Similarity=0.089 Sum_probs=59.8
Q ss_pred eeEEEEEEcccCcCCCCCcccCC-CCCCCEEEccCCCCC--CCCCccccCCCCcCEEeccCCcCCCCCCccccC------
Q 038019 65 CHITKLRVYGLNKKGVIPEELVT-LQYLTVLKIDQNFFT--GPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGN------ 135 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~-l~~L~~L~Ls~n~l~--~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~------ 135 (866)
.+++.|.+.++ +...--..+.. +++|++|||++|++. ..... .++.++.+.+..|.|. +..|.+
T Consensus 25 ~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I~---~~aF~~~~~~~~ 97 (329)
T 3sb4_A 25 NSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFVP---AYAFSNVVNGVT 97 (329)
T ss_dssp HHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEEC---TTTTEEEETTEE
T ss_pred CceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccccC---HHHhcccccccc
Confidence 46778887653 21111122333 788999999999887 11111 1122333444433221 233444
Q ss_pred --CCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEe
Q 038019 136 --LKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWA 192 (866)
Q Consensus 136 --l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 192 (866)
+++|+.|+|.+ .++...+.+|.++++|+.|+|.+|.+....+..|.++.++..+.+
T Consensus 98 ~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~ 155 (329)
T 3sb4_A 98 KGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPL 155 (329)
T ss_dssp EECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECT
T ss_pred cccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecC
Confidence 55555555555 444444445555555555555555555444455555444444433
No 148
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.53 E-value=4.3e-15 Score=160.13 Aligned_cols=143 Identities=15% Similarity=0.207 Sum_probs=93.0
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeee---cCCCCchhHHHHHHHHHHHHHhcC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAM---RGHLTEKADVFSFGVVALEIISGR 713 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~---~~~~t~ksDVySfGvvLlEl~tg~ 713 (866)
+......|++...+...++.|||.+................||.+|+|||.+. ...++.++|||||||+++||+||+
T Consensus 155 H~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~ 234 (307)
T 3lb7_A 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234 (307)
T ss_dssp CSCCCSSSEEECTTSCEEECCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred eCCCChhhEEEcCCCCEEEccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 33334447777777788899999998776543334445567999999999886 667899999999999999999999
Q ss_pred CCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 714 ASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 714 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
.|+......+. +. .....+ ...|.+..........+.+++..|++.+|++||++.||++.|+....
T Consensus 235 ~Pf~~~~~~~~--~~----~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 235 LPYSHINNRDQ--II----FMVGRG----YASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp CTTTTCCCHHH--HH----HHHHHT----CCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred CCCccCCcHHH--HH----HHHhcC----CCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 99975443221 11 111111 12222211111122345566779999999999999999999985443
No 149
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.53 E-value=1.1e-15 Score=163.18 Aligned_cols=131 Identities=18% Similarity=0.211 Sum_probs=79.3
Q ss_pred hhccCCCCCcccCHHHHHHHhcCCccccccCCCCcee----------EEEeecCCCCccCceeeecCCCCchhHHHHHHH
Q 038019 635 VLVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGP----------VYKVTANSYGYLAPEYAMRGHLTEKADVFSFGV 704 (866)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~----------vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGv 704 (866)
++|+..+..|++...+...++.|||+++.+..+.... ...+.+||+.|||||.+.+..++.|+|||||||
T Consensus 139 IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGv 218 (299)
T 4g31_A 139 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGL 218 (299)
T ss_dssp CCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHH
T ss_pred CccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHH
Confidence 3343334447887777788999999999887543211 123457999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 705 VALEIISGRASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 705 vLlEl~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
+++||++ |+... .+..... .. ...... |. ...........+..+|++.||++|||+.|+++
T Consensus 219 ilyell~---Pf~~~--~~~~~~~---~~-~~~~~~-----p~---~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 219 ILFELLY---PFSTQ--MERVRTL---TD-VRNLKF-----PP---LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHS---CCSSH--HHHHHHH---HH-HHTTCC-----CH---HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHcc---CCCCc--cHHHHHH---HH-HhcCCC-----CC---CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 9999996 65421 1111111 11 111111 11 11112223445777999999999999999875
No 150
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.52 E-value=2.2e-15 Score=164.05 Aligned_cols=138 Identities=16% Similarity=0.157 Sum_probs=97.1
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRAS 715 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p 715 (866)
|......|++...+...++.|||.++.++.........+..||++|+|||++.++.++.++|||||||+++||+| |+.|
T Consensus 140 H~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p 219 (327)
T 3poz_A 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219 (327)
T ss_dssp CSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred CCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCC
Confidence 333334477777777889999999998877655455556678899999999999999999999999999999999 9999
Q ss_pred CCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 716 SDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
++.....+ +...+ ..+.. +.. +......+.+++.+||+.+|++||+|.||++.|+....
T Consensus 220 ~~~~~~~~---~~~~~----~~~~~-----~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 220 YDGIPASE---ISSIL----EKGER-----LPQ---PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp TTTCCGGG---HHHHH----HTTCC-----CCC---CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ccCCCHHH---HHHHH----HcCCC-----CCC---CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 97654322 22221 11110 001 11122346667789999999999999999999986544
No 151
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.51 E-value=1.5e-15 Score=164.84 Aligned_cols=146 Identities=16% Similarity=0.117 Sum_probs=99.7
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-----CCCCchhHHHHHHHHHHHHHh
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-----GHLTEKADVFSFGVVALEIIS 711 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-----~~~t~ksDVySfGvvLlEl~t 711 (866)
+......|++...+...++.|||.++.+..+.......+..||+.|+|||.+.. ..++.++|||||||++|||+|
T Consensus 154 H~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~t 233 (322)
T 3soc_A 154 HRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233 (322)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHh
Confidence 333334477777777888999999988776543333334579999999999876 466789999999999999999
Q ss_pred cCCCCCCCchhhhh----------cHHHHHHHHhhcCCcccccCCcccc--cCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 038019 712 GRASSDKSLDMEKI----------YLLEWAWNLHENNQSFGLVDPTLTE--FNDKEALRVIGVALLCTQTSPMMRPPMSR 779 (866)
Q Consensus 712 g~~p~~~~~~~~~~----------~l~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~la~~C~~~~p~~RPsm~~ 779 (866)
|+.|+......... ....+...... ....|.+.. ........+.+++..||+.||++||||.|
T Consensus 234 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 308 (322)
T 3soc_A 234 RCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVH-----KKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGC 308 (322)
T ss_dssp TBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTT-----SCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCCCCCcchhccchhhhhccCCchhhhhhhhhc-----ccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHH
Confidence 99998754322111 11111111111 122233321 12234556778888999999999999999
Q ss_pred HHHHHhcC
Q 038019 780 VVAMLAGD 787 (866)
Q Consensus 780 V~~~L~~~ 787 (866)
|++.|+..
T Consensus 309 ll~~L~~l 316 (322)
T 3soc_A 309 VGERITQM 316 (322)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999853
No 152
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.51 E-value=1.1e-14 Score=156.73 Aligned_cols=143 Identities=23% Similarity=0.350 Sum_probs=105.1
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
..|++...+...++.|||.+...+............||.+|+|||... +.++.++||||||++++||+||+.|++....
T Consensus 161 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 239 (307)
T 2nru_A 161 SANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239 (307)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBS
T ss_pred HHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhc-CCCCccchhHHHHHHHHHHHHCCCCcccCcc
Confidence 346776666677899999998876544333334457999999999775 4689999999999999999999999976443
Q ss_pred hhhhcHHHHHHHHhh-cCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 722 MEKIYLLEWAWNLHE-NNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
.. .+..+...... ...+.+.+++.+..........+.+++..|++.+|.+||++.+|++.|+..
T Consensus 240 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l 304 (307)
T 2nru_A 240 PQ--LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304 (307)
T ss_dssp SS--BTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred hH--HHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 22 22222222222 122344566666556666777888899999999999999999999999854
No 153
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.50 E-value=3.7e-15 Score=170.25 Aligned_cols=137 Identities=12% Similarity=0.036 Sum_probs=95.1
Q ss_pred CcccC---HHHHHHHhcCCccccccCCCCcee-----EEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCC
Q 038019 643 PNIFG---YAELRSATKDFNRSNKLGEGGYGP-----VYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRA 714 (866)
Q Consensus 643 ~~~~~---~~~~~~~~~dF~~~~~lg~g~~g~-----vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~ 714 (866)
.|++. ..+...++.|||.++.+....... ......||.+|+|||++.+..++.++||||||||||||++|+.
T Consensus 132 ~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~ 211 (483)
T 3sv0_A 132 DNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSL 211 (483)
T ss_dssp GGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred ceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCC
Confidence 36665 466678899999998887654321 1124579999999999999999999999999999999999999
Q ss_pred CCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 715 SSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 715 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
||............+.+...........+ ...+ ..++.+++..|++.+|++||+|.+|+++|+..
T Consensus 212 Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l----~~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 212 PWQGLKAGTKKQKYEKISEKKVATSIEAL----CRGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp TTSSCCCSSHHHHHHHHHHHHHHSCHHHH----HTTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred CCccccchhHHHHHHHHhhccccccHHHH----hcCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 99865433322222222221111100000 0111 23456677799999999999999999998854
No 154
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.50 E-value=3.6e-14 Score=154.54 Aligned_cols=239 Identities=11% Similarity=0.002 Sum_probs=148.0
Q ss_pred eeEEEEEEcccCcC--CCCCcccCCCCCCCEEEccCCCCCCCCCccccC--------CCCcCEEeccCCcCCCCCCcccc
Q 038019 65 CHITKLRVYGLNKK--GVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGN--------LSRLMFLSFSHNDFSGPVPRELG 134 (866)
Q Consensus 65 ~~v~~L~l~~~~l~--~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~--------l~~L~~L~Ls~N~l~~~~p~~l~ 134 (866)
.+++.|+|++|++. ......+. .++.+.+..|.+ ....|.+ +++|+.|+|.+ .++.+-+.+|.
T Consensus 49 ~~L~~LdLs~n~i~~~~~~~~~~~---~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~ 121 (329)
T 3sb4_A 49 PSLKVLDISNAEIKMYSGKAGTYP---NGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFK 121 (329)
T ss_dssp TTCCEEEEEEEEECCEEESSSSSG---GGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTT
T ss_pred ccCeEEecCcceeEEecCcccccc---cccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHhh
Confidence 46899999999887 21111111 122333333321 1223333 55555555554 44433344455
Q ss_pred CCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecC----CC----------------------CCCChhhhh----cC
Q 038019 135 NLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSC----GA----------------------GGEIPSTFA----KL 184 (866)
Q Consensus 135 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n----~l----------------------~~~~p~~~~----~l 184 (866)
+|++|++|+|.+|.++...+..|.++.++..+.+..+ .. .+.++..+. ..
T Consensus 122 ~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~ 201 (329)
T 3sb4_A 122 GCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQP 201 (329)
T ss_dssp TCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCG
T ss_pred cCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCc
Confidence 5555555555555544444444444444443333221 00 111222211 24
Q ss_pred cCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCC-cee
Q 038019 185 RNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLT-DLS 263 (866)
Q Consensus 185 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~-~L~ 263 (866)
.++..+.+.++-...........+++|+.|+|++|+++...+..|.++++|+.|++.+| +.......|.++++|+ .|+
T Consensus 202 ~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~ 280 (329)
T 3sb4_A 202 RDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLE 280 (329)
T ss_dssp GGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEE
Confidence 55666666554221111111123789999999999998777788999999999999887 6677777899999999 999
Q ss_pred ccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEEC
Q 038019 264 LRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFL 312 (866)
Q Consensus 264 L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 312 (866)
+.+ .++...+..|..+++|+.|+++.|.++...+..|.++++|+.|+.
T Consensus 281 l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 281 LPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp ECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred Ecc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 988 677666788999999999999999999888889999999999874
No 155
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.49 E-value=1.2e-14 Score=155.07 Aligned_cols=137 Identities=18% Similarity=0.290 Sum_probs=84.8
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeee---cCCCCchhHHHHHHHHHHHHHhcCCCCCC
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAM---RGHLTEKADVFSFGVVALEIISGRASSDK 718 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~---~~~~t~ksDVySfGvvLlEl~tg~~p~~~ 718 (866)
..|++...+...++.|||.+...........+....||..|+|||.+. ...++.++||||||++++||+||+.|+..
T Consensus 148 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 227 (289)
T 3og7_A 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227 (289)
T ss_dssp GGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred cceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccc
Confidence 346777666778899999998776544444556668999999999886 66789999999999999999999999975
Q ss_pred CchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 719 SLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 719 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
....+ .+.+ ....+.. .+.+..........+.+++..|++.+|++||++.||+++|+...
T Consensus 228 ~~~~~--~~~~----~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 228 INNRD--QIIE----MVGRGSL----SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CCCHH--HHHH----HHHHTSC----CCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cchHH--HHHH----Hhccccc----CcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 43322 1222 2222211 12221111122244566777999999999999999999998653
No 156
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.49 E-value=3.1e-14 Score=139.88 Aligned_cols=133 Identities=17% Similarity=0.189 Sum_probs=81.1
Q ss_pred ccCCCCCCCEEEccCCCCCCCCCccccCCC-CcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCC
Q 038019 84 ELVTLQYLTVLKIDQNFFTGPLPSFIGNLS-RLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAK 162 (866)
Q Consensus 84 ~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 162 (866)
.+.++.+|++|+|++|.++. +|. +..+. +|++|+|++|.|++. ..|..+++|++|+|++|.+++..+..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 35566777777777777763 343 33333 777777777777654 46667777777777777776544444466666
Q ss_pred ccEEEeecCCCCCCChh--hhhcCcCCCEEEecCCCCCCCCccc----ccCCCCCCeEEccCCCCC
Q 038019 163 LEQLYIDSCGAGGEIPS--TFAKLRNMQTLWASDNPFTGKIPDF----IGNWTKLKSLRFQGNSFQ 222 (866)
Q Consensus 163 L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----l~~l~~L~~L~L~~N~l~ 222 (866)
|++|+|++|.++. +|. .+..+++|++|++++|.++ .+|.. +..+++|+.|+++.|.+.
T Consensus 90 L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 6666666666643 333 5556666666666666665 33332 555566666666655543
No 157
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.49 E-value=2.1e-16 Score=158.76 Aligned_cols=150 Identities=21% Similarity=0.326 Sum_probs=108.8
Q ss_pred cCCCCCCCEEEccCCCCCCCCCc------cccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhc
Q 038019 85 LVTLQYLTVLKIDQNFFTGPLPS------FIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELG 158 (866)
Q Consensus 85 l~~l~~L~~L~Ls~n~l~~~~p~------~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 158 (866)
+.....++.++++.+.+++.+|. .|.++++|++|+|++|.+++ +| .+.++++|++|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34455666667777777666665 77788888888888888875 56 7778888888888888887 5677777
Q ss_pred CCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCc-ccccCCCCCCeEEccCCCCCCCCch----------
Q 038019 159 NLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIP-DFIGNWTKLKSLRFQGNSFQGPIPS---------- 227 (866)
Q Consensus 159 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~---------- 227 (866)
.+++|++|+|++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+.+|.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 77888888888888876 34 57788888888888888875322 4677888888888888887765443
Q ss_pred hhcCCCCCCEEE
Q 038019 228 SLSKLASLESLQ 239 (866)
Q Consensus 228 ~~~~l~~L~~L~ 239 (866)
.+..+++|+.|+
T Consensus 169 ~~~~l~~L~~Ld 180 (198)
T 1ds9_A 169 VVKRLPNLKKLD 180 (198)
T ss_dssp HHHHCSSCSEEC
T ss_pred HHHhCCCcEEEC
Confidence 255556666554
No 158
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.49 E-value=1.3e-14 Score=156.47 Aligned_cols=135 Identities=19% Similarity=0.200 Sum_probs=85.7
Q ss_pred CCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 640 GSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 640 ~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
....|++...+...++.|||.++..+... .......||.+|+|||.+....++.++|||||||+++||+||+.|+...
T Consensus 165 ikp~NIll~~~~~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~ 242 (309)
T 3p86_A 165 LKSPNLLVDKKYTVKVCDFGLSRLKASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL 242 (309)
T ss_dssp CCGGGEEECTTCCEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred CChhhEEEeCCCcEEECCCCCCccccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 33347777777778899999998765432 1233457999999999999999999999999999999999999999764
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
...+ ....+.. ... ...+..... ..+.+++..|++.+|++||++.||++.|+..+..
T Consensus 243 ~~~~---~~~~~~~---~~~-----~~~~~~~~~---~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 243 NPAQ---VVAAVGF---KCK-----RLEIPRNLN---PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp CHHH---HHHHHHH---SCC-----CCCCCTTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred CHHH---HHHHHHh---cCC-----CCCCCccCC---HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 4322 1111111 110 111111112 2355566799999999999999999999976654
No 159
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.48 E-value=7.6e-15 Score=159.57 Aligned_cols=139 Identities=18% Similarity=0.237 Sum_probs=97.2
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRAS 715 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p 715 (866)
|......|++...+...++.|||.++.+........+....||.+|+|||.+..+.++.++|||||||+++||+| |+.|
T Consensus 138 H~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p 217 (325)
T 3kex_A 138 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217 (325)
T ss_dssp CSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred CCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCC
Confidence 333334477776667788999999999877665556667788999999999999999999999999999999999 9999
Q ss_pred CCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 716 SDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
+......+ +.+.+ ..+.. ...|.. ....+.+++..|++.+|++||+|.||++.|+.....
T Consensus 218 ~~~~~~~~---~~~~~----~~~~~--~~~~~~------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 218 YAGLRLAE---VPDLL----EKGER--LAQPQI------CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp TTTSCTTH---HHHHH----HTTCB--CCCCTT------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred ccccCHHH---HHHHH----HcCCC--CCCCCc------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 97644322 22221 11111 111111 111345567799999999999999999999876543
No 160
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.48 E-value=7.9e-13 Score=147.30 Aligned_cols=223 Identities=8% Similarity=0.010 Sum_probs=113.8
Q ss_pred ccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCc
Q 038019 84 ELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKL 163 (866)
Q Consensus 84 ~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 163 (866)
.|.++ +|+.++|..+ ++.+...+|.++ +|+.+.|.. .++.+-+.+|.++++|+.++|..|+++......|. ..+|
T Consensus 131 aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L 205 (401)
T 4fdw_A 131 AFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGI 205 (401)
T ss_dssp TTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCC
T ss_pred hcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-eccc
Confidence 34443 4666665544 443444455553 466666654 44444445566666666666666555543333343 4566
Q ss_pred cEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCc
Q 038019 164 EQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDI 243 (866)
Q Consensus 164 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n 243 (866)
+.+.|.. .+......+|.++++|+.+.+..| ++..-...|.+ .+|+.+.| .+.++..-...|.++++|+.+.+.++
T Consensus 206 ~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~ 281 (401)
T 4fdw_A 206 EEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGS 281 (401)
T ss_dssp SEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESS
T ss_pred CEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCc
Confidence 6666652 344444555666666666666543 33233334444 45666665 23344344455566666666665554
Q ss_pred cCC-----CCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCc
Q 038019 244 YNV-----SSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLS 318 (866)
Q Consensus 244 ~~~-----~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 318 (866)
... ......|.++++|+.+.|.+ .++..-...|..+++|+.|+|..| ++......|.++ +|+.|++.+|.+.
T Consensus 282 ~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 282 TFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp CCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC
T ss_pred cccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc
Confidence 332 23334455555555555552 244333445555555555555433 443444455555 5555555555544
No 161
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.48 E-value=1.5e-14 Score=164.65 Aligned_cols=138 Identities=22% Similarity=0.274 Sum_probs=91.7
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRAS 715 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p 715 (866)
|......|++..++...++.|||.++.+..+.+ ....+..+++.|+|||.+..+.++.|+|||||||++|||+| |+.|
T Consensus 303 HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P 381 (452)
T 1fmk_A 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381 (452)
T ss_dssp CSCCSGGGEEECGGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred CCCCChhhEEECCCCCEEECCCccceecCCCce-ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCC
Confidence 333334477777777889999999998875443 33445567899999999999999999999999999999999 9999
Q ss_pred CCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 716 SDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
+......+ +... ...+.. +.. +......+.+++..||+.+|++||||.+|+++|+.....
T Consensus 382 ~~~~~~~~---~~~~----i~~~~~-----~~~---~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 382 YPGMVNRE---VLDQ----VERGYR-----MPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp STTCCHHH---HHHH----HHTTCC-----CCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred CCCCCHHH---HHHH----HHcCCC-----CCC---CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 87544322 2211 222211 111 111223455677799999999999999999999976544
No 162
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.48 E-value=5.9e-15 Score=163.16 Aligned_cols=141 Identities=9% Similarity=0.060 Sum_probs=95.8
Q ss_pred CcccCH--HHHHHHhcCCccccccCCCCceeEE-----EeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCC
Q 038019 643 PNIFGY--AELRSATKDFNRSNKLGEGGYGPVY-----KVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRAS 715 (866)
Q Consensus 643 ~~~~~~--~~~~~~~~dF~~~~~lg~g~~g~vy-----~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p 715 (866)
.|++.. .+...++.|||.++.+...+....+ ....||++|||||++.+..++.++|||||||+++||+||+.|
T Consensus 181 ~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~P 260 (364)
T 3op5_A 181 SNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLP 260 (364)
T ss_dssp GGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred HHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 366665 5667789999999887654432222 234599999999999999999999999999999999999999
Q ss_pred CCCCchhhhhcHHHHHHHHhhcCCcccccCCccc-ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 716 SDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLT-EFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
+...... ...+.+....... .+.+++|+.+. ... ...+.+++..||+.+|++||+|.+|++.|+....
T Consensus 261 f~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~ 329 (364)
T 3op5_A 261 WEDNLKD--PKYVRDSKIRYRE-NIASLMDKCFPAANA---PGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK 329 (364)
T ss_dssp TGGGTTC--HHHHHHHHHHHHH-CHHHHHHHHSCTTCC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred ccccccC--HHHHHHHHHHhhh-hHHHHHHHhcccccC---HHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 9743221 1222222222111 12223333221 111 2345556669999999999999999999986554
No 163
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.47 E-value=1.2e-14 Score=155.76 Aligned_cols=129 Identities=10% Similarity=0.030 Sum_probs=88.7
Q ss_pred HHhcCCccccccCCCCcee-----EEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcH
Q 038019 653 SATKDFNRSNKLGEGGYGP-----VYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYL 727 (866)
Q Consensus 653 ~~~~dF~~~~~lg~g~~g~-----vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l 727 (866)
.++.|||.++.+....... ......||.+|+|||...+..++.++|||||||+++||+||+.|+...........
T Consensus 150 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 229 (298)
T 1csn_A 150 IYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQK 229 (298)
T ss_dssp EEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHH
T ss_pred EEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHH
Confidence 7899999998887543221 12345799999999999999999999999999999999999999976443222222
Q ss_pred HHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 728 LEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 728 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
...+....... ............+.+++..|++.+|++||++.+|++.|+....
T Consensus 230 ~~~~~~~~~~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 230 YERIGEKKQST--------PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp HHHHHHHHHHS--------CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHhhccCc--------cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 22222111100 0000000112345567779999999999999999999986543
No 164
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.47 E-value=4.5e-13 Score=149.28 Aligned_cols=242 Identities=9% Similarity=0.039 Sum_probs=194.0
Q ss_pred eeEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeec
Q 038019 65 CHITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAF 144 (866)
Q Consensus 65 ~~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 144 (866)
|+++.+.+..+ ++..-...|.++ +|+.++|.. .++.+....|.+|++|+.++|..|+++......|. +.+|+.+.|
T Consensus 135 ~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~l 210 (401)
T 4fdw_A 135 SQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLL 210 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEEC
T ss_pred CCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEe
Confidence 46778887654 665556678775 699999986 67767778899999999999999999866666676 689999999
Q ss_pred cCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCC--
Q 038019 145 GTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQ-- 222 (866)
Q Consensus 145 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-- 222 (866)
..+ ++.....+|.++++|+.+.|..+ ++..-..+|.+ .+|+.+.+. +.++..-...|.++++|+.+.+.+|.+.
T Consensus 211 p~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~ 286 (401)
T 4fdw_A 211 PVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDD 286 (401)
T ss_dssp CTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCC
T ss_pred CCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCC
Confidence 844 77677788999999999999864 66666777877 799999994 5566566788999999999999998775
Q ss_pred ---CCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCc
Q 038019 223 ---GPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPA 299 (866)
Q Consensus 223 ---~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 299 (866)
...+..|.+|++|+.+.|.+ .+.......|.++++|+.|.|..+ ++..-...|..+ +|+.|++.+|.+......
T Consensus 287 ~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~ 363 (401)
T 4fdw_A 287 PEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEK 363 (401)
T ss_dssp TTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCS
T ss_pred cccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccc
Confidence 35567899999999999984 466677778999999999999665 665566789999 999999999998866666
Q ss_pred ccCCCC-CCcEEECcCCCC
Q 038019 300 TLFNID-SLEYLFLGNNSL 317 (866)
Q Consensus 300 ~l~~l~-~L~~L~L~~N~l 317 (866)
.|..++ +++.|++-.+.+
T Consensus 364 ~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 364 VWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp SCCCSCTTCCEEEECGGGH
T ss_pred cccCCCCCccEEEeCHHHH
Confidence 777664 566777665544
No 165
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.47 E-value=8.5e-15 Score=162.16 Aligned_cols=133 Identities=19% Similarity=0.216 Sum_probs=94.4
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKS 719 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~ 719 (866)
...|++...+...++.|||.++.+.............+|+.|+|||++.+..++.++|||||||++|||+| |+.|+...
T Consensus 230 kp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~ 309 (370)
T 2psq_A 230 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 309 (370)
T ss_dssp CGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 33477777777788999999987765443222223357789999999999999999999999999999999 99998754
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
...+ +...+ ..+.. +.... .....+.+++..|++.+|++||++.||++.|+...
T Consensus 310 ~~~~---~~~~~----~~~~~-----~~~~~---~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 310 PVEE---LFKLL----KEGHR-----MDKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp CGGG---HHHHH----HTTCC-----CCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHH---HHHHH----hcCCC-----CCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 3322 22221 11211 11111 11234556677999999999999999999998654
No 166
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.47 E-value=1.5e-14 Score=157.28 Aligned_cols=136 Identities=16% Similarity=0.169 Sum_probs=88.3
Q ss_pred CCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCC
Q 038019 640 GSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDK 718 (866)
Q Consensus 640 ~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~ 718 (866)
....|++...+...++.|||.++.++.........+..+|..|+|||.+.+..++.++|||||||+++||+| |+.|++.
T Consensus 143 ikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~ 222 (327)
T 3lzb_A 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222 (327)
T ss_dssp CCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 333477776677788999999998876554444555678889999999999999999999999999999999 9999976
Q ss_pred CchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 719 SLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 719 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
....+ +...+ ..+.. +..... ....+.+++..|++.+|++||++.||++.|+.....
T Consensus 223 ~~~~~---~~~~~----~~~~~-----~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 223 IPASE---ISSIL----EKGER-----LPQPPI---CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CCGGG---HHHHH----HTTCC-----CCCCTT---BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred CCHHH---HHHHH----HcCCC-----CCCCcc---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 54332 22221 11110 111111 122355667799999999999999999999976544
No 167
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=2.1e-16 Score=158.73 Aligned_cols=150 Identities=19% Similarity=0.268 Sum_probs=128.9
Q ss_pred eEEEEEEcccCcCCCCCc------ccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCC
Q 038019 66 HITKLRVYGLNKKGVIPE------ELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKEL 139 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~p~------~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 139 (866)
+++.+++..+.++|.+|. .|..+++|++|+|++|.+++ +| .+.++++|++|+|++|.++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455666777777777776 89999999999999999986 67 8999999999999999998 678888888999
Q ss_pred CEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCCh-hhhhcCcCCCEEEecCCCCCCCCcc----------cccCC
Q 038019 140 TVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIP-STFAKLRNMQTLWASDNPFTGKIPD----------FIGNW 208 (866)
Q Consensus 140 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~----------~l~~l 208 (866)
++|+|++|++++ +| .+..+++|++|+|++|.++...+ ..+..+++|++|++++|.+++.+|. .+..+
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l 173 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRL 173 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhC
Confidence 999999999986 44 79999999999999999987543 5799999999999999999876654 37889
Q ss_pred CCCCeEEccCCCCC
Q 038019 209 TKLKSLRFQGNSFQ 222 (866)
Q Consensus 209 ~~L~~L~L~~N~l~ 222 (866)
++|+.|+ +|.++
T Consensus 174 ~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 174 PNLKKLD--GMPVD 185 (198)
T ss_dssp SSCSEEC--CGGGT
T ss_pred CCcEEEC--CcccC
Confidence 9999987 66655
No 168
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.47 E-value=1.3e-14 Score=155.23 Aligned_cols=139 Identities=12% Similarity=0.023 Sum_probs=95.3
Q ss_pred CcccC---HHHHHHHhcCCccccccCCCCcee-----EEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCC
Q 038019 643 PNIFG---YAELRSATKDFNRSNKLGEGGYGP-----VYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRA 714 (866)
Q Consensus 643 ~~~~~---~~~~~~~~~dF~~~~~lg~g~~g~-----vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~ 714 (866)
.|++. ..+...++.|||.++.+....... ......||..|+|||...+..++.++|||||||+++||+||+.
T Consensus 134 ~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 213 (296)
T 4hgt_A 134 DNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSL 213 (296)
T ss_dssp GGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred HHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCC
Confidence 46665 566677899999998887654321 1224478999999999999999999999999999999999999
Q ss_pred CCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 715 SSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 715 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
|+..............+......... +.+. ..+ ...+.+++..|++.+|++||++.+|++.|+....
T Consensus 214 pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 214 PWQGLKAATKRQKYERISEKKMSTPI-EVLC---KGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp TTSSCCCSSSSSHHHHHHHHHHHSCH-HHHT---TTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred CCcccchhhhhhhhhhhhcccccchh-hhhh---ccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 99764433322222222211110000 0000 011 2345667779999999999999999999986543
No 169
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.46 E-value=1.4e-14 Score=154.94 Aligned_cols=139 Identities=12% Similarity=0.023 Sum_probs=94.2
Q ss_pred CcccC---HHHHHHHhcCCccccccCCCCcee-----EEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCC
Q 038019 643 PNIFG---YAELRSATKDFNRSNKLGEGGYGP-----VYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRA 714 (866)
Q Consensus 643 ~~~~~---~~~~~~~~~dF~~~~~lg~g~~g~-----vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~ 714 (866)
.|++. ..+...++.|||.+..++...... ......||..|+|||...+..++.++|||||||+++||+||+.
T Consensus 134 ~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 213 (296)
T 3uzp_A 134 DNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSL 213 (296)
T ss_dssp GGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred HHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCC
Confidence 35655 356667899999998887654311 1134479999999999999999999999999999999999999
Q ss_pred CCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 715 SSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 715 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
|+..............+......... +.+. ..+ ...+.+++..|++.+|++||++.+|++.|+....
T Consensus 214 pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 280 (296)
T 3uzp_A 214 PWQGLKAATKRQKYERISEKKMSTPI-EVLC---KGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp TTSSCCCSSSSSHHHHHHHHHHHSCH-HHHT---TTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred CCCCcCchhhhhhhhhhcccccCCch-HHHH---hhC----CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHH
Confidence 99764432222222222211110000 0000 111 1345667779999999999999999999986543
No 170
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.46 E-value=3.8e-14 Score=154.41 Aligned_cols=137 Identities=8% Similarity=-0.015 Sum_probs=93.5
Q ss_pred CcccCHHHHH-----HHhcCCccccccCCCCceeE-----EEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhc
Q 038019 643 PNIFGYAELR-----SATKDFNRSNKLGEGGYGPV-----YKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISG 712 (866)
Q Consensus 643 ~~~~~~~~~~-----~~~~dF~~~~~lg~g~~g~v-----y~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg 712 (866)
.|++...+.. .++.|||.++.+........ .....||..|+|||.+.+..++.++|||||||+++||+||
T Consensus 134 ~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g 213 (330)
T 2izr_A 134 ENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG 213 (330)
T ss_dssp GGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred HHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcC
Confidence 3666655554 78999999988765432211 1345799999999999999999999999999999999999
Q ss_pred CCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 713 RASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 713 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
+.|+......+.......+......... +.+....+ .+.+++..|++.+|.+||++.+|++.|+...
T Consensus 214 ~~Pf~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~p----~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 214 SLPWQGLKADTLKERYQKIGDTKRATPI-----EVLCENFP----EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp SCTTTTCCCSSHHHHHHHHHHHHHHSCH-----HHHTTTCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred CCCccccccccHHHHHHHHHhhhccCCH-----HHHhccCh----HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 9999864432222222222111100000 00001111 5666777999999999999999999998544
No 171
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.46 E-value=2.4e-14 Score=157.86 Aligned_cols=138 Identities=20% Similarity=0.164 Sum_probs=98.5
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRAS 715 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p 715 (866)
|......|++...+...++.|||.+..+..+..........||.+|+|||++.+..++.++|||||||+++||+| |+.|
T Consensus 216 H~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p 295 (359)
T 3vhe_A 216 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295 (359)
T ss_dssp CSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCC
Confidence 333334478877778889999999998876655555556678999999999999999999999999999999999 9999
Q ss_pred CCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 716 SDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
+......+. +......+.. +....... ..+.+++..|++.+|++||+|.||++.|+...
T Consensus 296 ~~~~~~~~~------~~~~~~~~~~-----~~~~~~~~---~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 296 YPGVKIDEE------FCRRLKEGTR-----MRAPDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp STTCCCSHH------HHHHHHHTCC-----CCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCccchhHH------HHHHHHcCCC-----CCCCCCCC---HHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 875432221 1111221111 11111112 23556677999999999999999999998643
No 172
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.46 E-value=1e-13 Score=136.19 Aligned_cols=131 Identities=15% Similarity=0.163 Sum_probs=104.5
Q ss_pred cccCCCCcCEEeccCCcCCCCCCccccCCC-CCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcC
Q 038019 108 FIGNLSRLMFLSFSHNDFSGPVPRELGNLK-ELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRN 186 (866)
Q Consensus 108 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 186 (866)
.+.++.+|++|+|++|+++. +|. +..+. +|++|+|++|.+++. ..+..+++|++|+|++|.+++..+..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 46778899999999999984 454 55544 999999999999865 67888999999999999998776666788999
Q ss_pred CCEEEecCCCCCCCCcc--cccCCCCCCeEEccCCCCCCCCch----hhcCCCCCCEEEccCcc
Q 038019 187 MQTLWASDNPFTGKIPD--FIGNWTKLKSLRFQGNSFQGPIPS----SLSKLASLESLQMSDIY 244 (866)
Q Consensus 187 L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~l~~n~ 244 (866)
|++|+|++|+++ .+|. .+..+++|+.|++++|.+.. +|. .+..+++|+.|+++.|.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECC
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCC
Confidence 999999999986 4555 78888899999999998874 344 36667777777666554
No 173
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.45 E-value=1.5e-14 Score=158.26 Aligned_cols=135 Identities=21% Similarity=0.248 Sum_probs=96.2
Q ss_pred CCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCC
Q 038019 640 GSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDK 718 (866)
Q Consensus 640 ~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~ 718 (866)
....|++...+...++.|||.++.+....+........||.+|+|||.+..+.++.++|||||||+++||+| |+.|+..
T Consensus 200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 333477777778889999999988765544444455678999999999999999999999999999999999 9999875
Q ss_pred CchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 719 SLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 719 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
....+ +.. ....+... ..... ....+.+++..|++.+|++||++.+|++.|+....
T Consensus 280 ~~~~~---~~~----~~~~~~~~-----~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 280 MAHEE---VIY----YVRDGNIL-----ACPEN---CPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp SCHHH---HHH----HHHTTCCC-----CCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CChHH---HHH----HHhCCCcC-----CCCCC---CCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 43221 111 12222211 11111 12345566779999999999999999999997654
No 174
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.45 E-value=1.3e-14 Score=161.21 Aligned_cols=143 Identities=12% Similarity=0.058 Sum_probs=88.8
Q ss_pred hccCCCCCcccCHHHHHHHhcCCccccccCCCCc--eeEEEeecCCCCccCceeeecC-CCCchhHHHHHHHHHHHHHhc
Q 038019 636 LVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGY--GPVYKVTANSYGYLAPEYAMRG-HLTEKADVFSFGVVALEIISG 712 (866)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~--g~vy~~~~gt~gY~aPE~~~~~-~~t~ksDVySfGvvLlEl~tg 712 (866)
+|...+..|++...+...++.|||+++.+..... .......+||+.|||||.+.+. .++.++||||+||+++||+||
T Consensus 180 iHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G 259 (398)
T 4b99_A 180 IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLAR 259 (398)
T ss_dssp BCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred cCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHC
Confidence 3333334477777777889999999998864322 1223345899999999988764 569999999999999999999
Q ss_pred CCCCCCCchhhhhcHHHHHHHHhhc---CCccc-----------ccCCcccccCHH-----HHHHHHHHHHHccCCCCCC
Q 038019 713 RASSDKSLDMEKIYLLEWAWNLHEN---NQSFG-----------LVDPTLTEFNDK-----EALRVIGVALLCTQTSPMM 773 (866)
Q Consensus 713 ~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~-----------~~d~~l~~~~~~-----~~~~~~~la~~C~~~~p~~ 773 (866)
+.||......+.. ..+...... ..... .+.+.. ..+.+ ....+.++..+|++.||++
T Consensus 260 ~~pF~g~~~~~~l---~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~dLl~~mL~~dP~~ 335 (398)
T 4b99_A 260 RQLFPGKNYVHQL---QLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQ-PVPWETVYPGADRQALSLLGRMLRFEPSA 335 (398)
T ss_dssp SCSSCCSSHHHHH---HHHHHHHCCCCGGGTC-----CHHHHHHSSCCCC-CCCHHHHSTTCCHHHHHHHHHHSCSSTTT
T ss_pred CCCCCCCCHHHHH---HHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcC-CCCHHHhCCCCCHHHHHHHHHHCcCChhH
Confidence 9999865433322 111111100 00000 000000 00000 1123456677999999999
Q ss_pred CCCHHHHHH
Q 038019 774 RPPMSRVVA 782 (866)
Q Consensus 774 RPsm~~V~~ 782 (866)
|||+.|+++
T Consensus 336 R~ta~e~L~ 344 (398)
T 4b99_A 336 RISAAAALR 344 (398)
T ss_dssp SCCHHHHTT
T ss_pred CcCHHHHhc
Confidence 999998864
No 175
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.45 E-value=1.1e-14 Score=166.02 Aligned_cols=138 Identities=21% Similarity=0.290 Sum_probs=96.9
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRAS 715 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p 715 (866)
|......|++...+...++.|||.++.+..+.+ ....+..+|+.|+|||.+..+.++.++|||||||++|||+| |+.|
T Consensus 307 HrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P 385 (454)
T 1qcf_A 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385 (454)
T ss_dssp CSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred CCCCCHHHEEECCCCcEEEeeCCCceEcCCCce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCC
Confidence 333333477777777788999999998764322 11233456789999999999999999999999999999999 9999
Q ss_pred CCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 716 SDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
+......+ +...+. .+.. . +. +......+.+++..||+.+|++||||.+|+++|+.....
T Consensus 386 ~~~~~~~~---~~~~i~----~~~~--~--~~----~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 386 YPGMSNPE---VIRALE----RGYR--M--PR----PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp STTCCHHH---HHHHHH----HTCC--C--CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred CCCCCHHH---HHHHHH----cCCC--C--CC----CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 97544322 222221 1110 0 11 111223456677799999999999999999999976543
No 176
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.44 E-value=1.5e-14 Score=157.19 Aligned_cols=136 Identities=20% Similarity=0.220 Sum_probs=93.0
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCc-eeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGY-GPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDK 718 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~-g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~ 718 (866)
...|++...+...++.|||.++.+..... .....+..+|++|+|||++....++.++|||||||+++||+| |+.|+..
T Consensus 178 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~ 257 (325)
T 3kul_A 178 AARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWN 257 (325)
T ss_dssp SGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCccc
Confidence 33477777777788999999998865432 122234457889999999999999999999999999999999 9999875
Q ss_pred CchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCCC
Q 038019 719 SLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEVG 791 (866)
Q Consensus 719 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~~ 791 (866)
....+ +...+ ..+. .+... ......+.+++..|++.||++||+|.||+++|+.....+
T Consensus 258 ~~~~~---~~~~~----~~~~-----~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 258 MTNRD---VISSV----EEGY-----RLPAP---MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp SCHHH---HHHHH----HTTC-----CCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred CCHHH---HHHHH----HcCC-----CCCCC---CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 44322 22111 1111 11111 111234556777999999999999999999999765543
No 177
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.44 E-value=3.8e-14 Score=152.01 Aligned_cols=145 Identities=14% Similarity=0.124 Sum_probs=97.4
Q ss_pred hccCCCCCcccCHHHHHHHhcCCccccccCCCCceeE--EEeecCCCCccCceeeecC------CCCchhHHHHHHHHHH
Q 038019 636 LVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPV--YKVTANSYGYLAPEYAMRG------HLTEKADVFSFGVVAL 707 (866)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~v--y~~~~gt~gY~aPE~~~~~------~~t~ksDVySfGvvLl 707 (866)
.|......|++...+...++.|||.++.+........ .....||++|+|||.+... .++.++|||||||+++
T Consensus 135 vH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~ 214 (301)
T 3q4u_A 135 AHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214 (301)
T ss_dssp ECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred ecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHH
Confidence 3333344477777777888999999987765443221 1233799999999998876 5668999999999999
Q ss_pred HHHhc----------CCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCccc--ccCHHHHHHHHHHHHHccCCCCCCCC
Q 038019 708 EIISG----------RASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLT--EFNDKEALRVIGVALLCTQTSPMMRP 775 (866)
Q Consensus 708 El~tg----------~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~--~~~~~~~~~~~~la~~C~~~~p~~RP 775 (866)
||+|| +.|+........ ..... ...... +...+.+. .........+.+++..|++.||++||
T Consensus 215 el~tg~~~~~~~~~~~~pf~~~~~~~~-~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 288 (301)
T 3q4u_A 215 EVARRMVSNGIVEDYKPPFYDVVPNDP-SFEDM-RKVVCV----DQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARL 288 (301)
T ss_dssp HHHTTBCBTTBCCCCCCTTTTTSCSSC-CHHHH-HHHHTT----SCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSC
T ss_pred HHHhhhcCccccccccccccccCCCCc-chhhh-hHHHhc----cCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCC
Confidence 99999 777754332211 11111 111111 11222221 12334556777888899999999999
Q ss_pred CHHHHHHHHhc
Q 038019 776 PMSRVVAMLAG 786 (866)
Q Consensus 776 sm~~V~~~L~~ 786 (866)
||.||+++|+.
T Consensus 289 s~~~i~~~L~~ 299 (301)
T 3q4u_A 289 TALRIKKTLTK 299 (301)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHhc
Confidence 99999999974
No 178
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=4.4e-13 Score=130.81 Aligned_cols=108 Identities=19% Similarity=0.222 Sum_probs=76.6
Q ss_pred eEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeecc
Q 038019 66 HITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFG 145 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 145 (866)
..+.|++++|.++. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 34567777777764 555553 677777887777777767777777777777777777776666667777777777777
Q ss_pred CCCCCCCCchhhcCCCCccEEEeecCCCCCC
Q 038019 146 TNNFSGALPPELGNLAKLEQLYIDSCGAGGE 176 (866)
Q Consensus 146 ~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 176 (866)
+|++++..+..|..+++|++|+|++|.+...
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 7777766555677777777777777766544
No 179
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.44 E-value=2.9e-14 Score=158.72 Aligned_cols=136 Identities=18% Similarity=0.197 Sum_probs=97.2
Q ss_pred CCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCC
Q 038019 640 GSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDK 718 (866)
Q Consensus 640 ~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~ 718 (866)
....|++..++...++.|||.++.++............+|++|+|||++.+..++.++|||||||+++||+| |+.|+..
T Consensus 217 lkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~ 296 (382)
T 3tt0_A 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296 (382)
T ss_dssp CCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 333477777777888999999998876544333334467889999999999999999999999999999999 9999875
Q ss_pred CchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 719 SLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 719 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
....+ +.+. ...+.. +...... ...+.+++..|++.+|++||+|.||++.|+.....
T Consensus 297 ~~~~~---~~~~----~~~~~~-----~~~~~~~---~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 297 VPVEE---LFKL----LKEGHR-----MDKPSNC---TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp CCHHH---HHHH----HHTTCC-----CCCCSSC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCHHH---HHHH----HHcCCC-----CCCCccC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 43221 2222 222211 1111111 22455667799999999999999999999976543
No 180
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.43 E-value=1.6e-14 Score=160.09 Aligned_cols=135 Identities=19% Similarity=0.244 Sum_probs=83.1
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCce-eEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYG-PVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDK 718 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g-~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~ 718 (866)
...|++...+...++.|||.++.+...... ....+..+|++|+|||++..+.++.++|||||||++|||++ |+.|+..
T Consensus 174 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~ 253 (373)
T 2qol_A 174 AARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253 (373)
T ss_dssp CGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTT
T ss_pred CcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCC
Confidence 334777777777889999999888654321 12233356789999999999999999999999999999998 9999875
Q ss_pred CchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 719 SLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 719 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
....+ +...+ ..+.. .+. +......+.+++..|++.+|++||+|.||+++|+..+..
T Consensus 254 ~~~~~---~~~~i----~~~~~----~~~----~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 254 MSNQD---VIKAV----DEGYR----LPP----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp CCHHH---HHHHH----HTTEE----CCC----CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCHHH---HHHHH----HcCCC----CCC----CccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 44322 22211 11110 010 111234466777899999999999999999999876543
No 181
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.43 E-value=2.2e-14 Score=159.29 Aligned_cols=132 Identities=21% Similarity=0.246 Sum_probs=91.1
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKS 719 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~ 719 (866)
...|++...+...++.|||.++....+.+........+++.|+|||.+..+.++.++|||||||++|||+| |+.|+...
T Consensus 240 kp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~ 319 (377)
T 3cbl_A 240 AARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL 319 (377)
T ss_dssp SGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred CHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 33467776677788999999987765432111111234678999999999999999999999999999999 99998754
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
...+ ..+ ....+.. ....... ...+.+++..||+.+|++||||.+|++.|+..
T Consensus 320 ~~~~---~~~----~~~~~~~-----~~~~~~~---~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 372 (377)
T 3cbl_A 320 SNQQ---TRE----FVEKGGR-----LPCPELC---PDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372 (377)
T ss_dssp CHHH---HHH----HHHTTCC-----CCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CHHH---HHH----HHHcCCC-----CCCCCCC---CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 4322 222 2222211 1111111 23455677799999999999999999999853
No 182
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.43 E-value=3.7e-14 Score=155.35 Aligned_cols=126 Identities=16% Similarity=0.275 Sum_probs=78.7
Q ss_pred cccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-----------CCCCchhHHHHHHHHHHHHHhc
Q 038019 644 NIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-----------GHLTEKADVFSFGVVALEIISG 712 (866)
Q Consensus 644 ~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-----------~~~t~ksDVySfGvvLlEl~tg 712 (866)
|++.. +...++.|||.++.+.............||++|+|||++.. +.++.++|||||||+++||+||
T Consensus 138 NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g 216 (343)
T 3dbq_A 138 NFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 216 (343)
T ss_dssp GEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHS
T ss_pred eEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhC
Confidence 55543 44578999999998876655555566789999999999864 7899999999999999999999
Q ss_pred CCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 038019 713 RASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAM 783 (866)
Q Consensus 713 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~ 783 (866)
+.|+...... ............ ......... ..+.+++..|++.||++||||.||++.
T Consensus 217 ~~pf~~~~~~-----~~~~~~~~~~~~-----~~~~~~~~~---~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 217 KTPFQQIINQ-----ISKLHAIIDPNH-----EIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp SCTTTTCCSH-----HHHHHHHHCTTS-----CCCCCCCSC---HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCcchhhhhH-----HHHHHHHhcCCc-----ccCCcccCC---HHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 9999753221 111111111110 011111222 234556679999999999999999864
No 183
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.42 E-value=5.2e-14 Score=166.08 Aligned_cols=136 Identities=18% Similarity=0.171 Sum_probs=92.3
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCc-eeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGY-GPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRA 714 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~-g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~ 714 (866)
+......|++...+...++.|||.++.++.+.. ........+|++|+|||++..+.++.++|||||||++|||+| |+.
T Consensus 459 HrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~ 538 (613)
T 2ozo_A 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 538 (613)
T ss_dssp CSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred cCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 333334477777777889999999998875432 111223346789999999999999999999999999999998 999
Q ss_pred CCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 715 SSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 715 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
|+......+ +... +..+... .. +......+.+++..||+.+|++||+|.+|++.|+..
T Consensus 539 Pf~~~~~~~---~~~~----i~~~~~~-----~~---p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 539 PYKKMKGPE---VMAF----IEQGKRM-----EC---PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp TTTTCCSHH---HHHH----HHTTCCC-----CC---CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCHHH---HHHH----HHcCCCC-----CC---CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 997654332 2222 2222111 11 111223466677799999999999999999999854
No 184
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.42 E-value=6.7e-14 Score=161.10 Aligned_cols=137 Identities=18% Similarity=0.165 Sum_probs=97.0
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRAS 715 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p 715 (866)
|......|++...+...++.|||.++.+....+ ....+..+++.|+|||.+..+.++.|+|||||||++|||+| |+.|
T Consensus 341 HrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p 419 (495)
T 1opk_A 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 419 (495)
T ss_dssp CSCCSGGGEEECGGGCEEECCTTCEECCTTCCE-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cCCCChhhEEECCCCcEEEeecccceeccCCce-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCC
Confidence 333334477777777889999999998764432 22334456789999999999999999999999999999999 9999
Q ss_pred CCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 716 SDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
+......+ +.+.+ ..+. .... +......+.+++..||+.+|++||+|.+|+++|+....
T Consensus 420 ~~~~~~~~---~~~~~----~~~~-----~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 420 YPGIDLSQ---VYELL----EKDY-----RMER---PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp STTCCGGG---HHHHH----HTTC-----CCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCHHH---HHHHH----HcCC-----CCCC---CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 87544322 22222 1111 0111 11122345567779999999999999999999996543
No 185
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.42 E-value=4.5e-14 Score=153.18 Aligned_cols=135 Identities=19% Similarity=0.231 Sum_probs=86.8
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKS 719 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~ 719 (866)
...|++...+...++.|||.++.+..+.......+..+|+.|+|||.+....++.++|||||||+++||+| |+.|+...
T Consensus 164 kp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 243 (323)
T 3qup_A 164 AARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI 243 (323)
T ss_dssp SGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred CcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc
Confidence 33477777777788999999998877655444445567889999999999999999999999999999999 99998764
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
...+ +...+. .+.. +.. +......+.+++..|++.||++||++.++++.|+.....
T Consensus 244 ~~~~---~~~~~~----~~~~-----~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 244 ENAE---IYNYLI----GGNR-----LKQ---PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp CGGG---HHHHHH----TTCC-----CCC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ChHH---HHHHHh----cCCC-----CCC---CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 4322 222111 1110 011 111123456677799999999999999999999975543
No 186
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.42 E-value=5.2e-14 Score=154.30 Aligned_cols=138 Identities=12% Similarity=0.133 Sum_probs=90.1
Q ss_pred CcccCHHHH--HHHhcCCccccccCCCCceeEE-----EeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCC
Q 038019 643 PNIFGYAEL--RSATKDFNRSNKLGEGGYGPVY-----KVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRAS 715 (866)
Q Consensus 643 ~~~~~~~~~--~~~~~dF~~~~~lg~g~~g~vy-----~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p 715 (866)
.|++...+. ..++.|||.++.+..++....+ ....||..|+|||.+.+..++.++|||||||+++||+||+.|
T Consensus 180 ~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p 259 (345)
T 2v62_A 180 ANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLP 259 (345)
T ss_dssp GGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred HHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 356655444 6778999999887654322222 234799999999999999999999999999999999999999
Q ss_pred CCCCchhhhhcHHHHHHHHhhcCCcccccCCccccc--CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 716 SDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEF--NDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
+....... . ............ +.+.+... .......+.++...|++.+|++||++.+|++.|+..
T Consensus 260 f~~~~~~~-~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 260 WEQNLKDP-V-AVQTAKTNLLDE-----LPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp TGGGTTCH-H-HHHHHHHHHHHT-----TTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred cccccccc-H-HHHHHHHhhccc-----ccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 96422111 1 111111111100 01100000 001122455666799999999999999999999853
No 187
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.42 E-value=5.9e-14 Score=162.88 Aligned_cols=130 Identities=16% Similarity=0.117 Sum_probs=88.6
Q ss_pred hhccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcC
Q 038019 635 VLVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGR 713 (866)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~ 713 (866)
++|+....-|++.+.+...++.|||+++.+..+.. ...+||+.|||||.+.. ..|+.++||||+||+|+||+||+
T Consensus 313 IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~----~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~ 388 (689)
T 3v5w_A 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388 (689)
T ss_dssp EECCCCSGGGEEECTTSCEEECCCTTCEECSSCCC----CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred ccccCCchHHeEEeCCCCEEecccceeeecCCCCC----CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 33443344488888888899999999998876542 23579999999999975 47999999999999999999999
Q ss_pred CCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHH
Q 038019 714 ASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPP-----MSRVV 781 (866)
Q Consensus 714 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPs-----m~~V~ 781 (866)
.||......+...+...+. .. ++.+......++ .++...|++.||++|++ +.||.
T Consensus 389 ~PF~~~~~~~~~~i~~~i~----~~------~~~~p~~~S~~a---~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 389 SPFRQHKTKDKHEIDRMTL----TM------AVELPDSFSPEL---RSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp CTTCGGGCCCHHHHHHHHH----HC------CCCCCTTSCHHH---HHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred CCCCCCChHHHHHHHHhhc----CC------CCCCCccCCHHH---HHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 9997432222111111111 11 111112122333 44556999999999998 56665
No 188
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.42 E-value=2.8e-14 Score=159.15 Aligned_cols=126 Identities=17% Similarity=0.291 Sum_probs=80.7
Q ss_pred cccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-----------CCCCchhHHHHHHHHHHHHHhc
Q 038019 644 NIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-----------GHLTEKADVFSFGVVALEIISG 712 (866)
Q Consensus 644 ~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-----------~~~t~ksDVySfGvvLlEl~tg 712 (866)
|++. .+...++.|||.++.+..+..........||+.|+|||++.. +.++.++|||||||+++||+||
T Consensus 185 NIll-~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G 263 (390)
T 2zmd_A 185 NFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 263 (390)
T ss_dssp GEEE-SSSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHS
T ss_pred HEEE-ECCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHC
Confidence 5554 345678999999998876554444455679999999998864 4799999999999999999999
Q ss_pred CCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 038019 713 RASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAM 783 (866)
Q Consensus 713 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~ 783 (866)
+.|+...... ............ .........+ .+.+++..|++.||++||+|.||++.
T Consensus 264 ~~Pf~~~~~~-----~~~~~~~~~~~~-----~~~~~~~~~~---~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 264 KTPFQQIINQ-----ISKLHAIIDPNH-----EIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp SCTTTTCCCH-----HHHHHHHHCTTS-----CCCCCCCSCH---HHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCcchhhhHH-----HHHHHHHhCccc-----cCCCCccchH---HHHHHHHHHcccChhhCCCHHHHhhC
Confidence 9999753221 111122111110 1111122222 34556679999999999999999864
No 189
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.41 E-value=6e-14 Score=151.17 Aligned_cols=130 Identities=25% Similarity=0.389 Sum_probs=84.2
Q ss_pred CCcccCHHHHH-HHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELR-SATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~-~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++...+.. .++.|||.+..+... .....||.+|+|||.+.+..++.++|||||||+++||+||+.|++...
T Consensus 133 p~NIll~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 207 (307)
T 2eva_A 133 PPNLLLVAGGTVLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG 207 (307)
T ss_dssp GGGEEEETTTTEEEECCCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTC
T ss_pred hhHEEEeCCCCEEEEcccccccccccc-----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhC
Confidence 34666555444 578999998776532 223468999999999999999999999999999999999999997533
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcc-cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTL-TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
... . ...|.. . .+. .+.. ...+ ..+.+++..|++.+|++||+|.||+++|+.....
T Consensus 208 ~~~-~-~~~~~~--~-~~~-----~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 264 (307)
T 2eva_A 208 GPA-F-RIMWAV--H-NGT-----RPPLIKNLP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264 (307)
T ss_dssp SSH-H-HHHHHH--H-TTC-----CCCCBTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred ccH-H-HHHHHH--h-cCC-----CCCcccccC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 211 1 111111 1 111 1111 1222 2345567799999999999999999999865544
No 190
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.41 E-value=5.7e-14 Score=153.87 Aligned_cols=140 Identities=17% Similarity=0.153 Sum_probs=98.3
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRAS 715 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p 715 (866)
|......|++...+...++.|||.+..+.............||++|+|||.+.++.++.++|||||||+++||+| |+.|
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 274 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCC
Confidence 333333477777777788999999998876654444445567899999999999999999999999999999998 9999
Q ss_pred CCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 716 SDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
+....... .+. .....+. .+...... ...+.+++..|++.||++||++.||++.|+.....
T Consensus 275 ~~~~~~~~--~~~----~~~~~~~-----~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 275 YPGIPVDA--NFY----KLIQNGF-----KMDQPFYA---TEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp STTCCCSH--HHH----HHHHTTC-----CCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred cccCCcHH--HHH----HHHhcCC-----CCCCCCCC---CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 87543222 111 1122211 11111111 23455566799999999999999999999965543
No 191
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.41 E-value=1.1e-12 Score=127.89 Aligned_cols=107 Identities=19% Similarity=0.290 Sum_probs=75.2
Q ss_pred CCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeec
Q 038019 91 LTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDS 170 (866)
Q Consensus 91 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 170 (866)
.++|++++|.++. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4678888888763 565443 6777788888777777777777777777777777777766665667777777777777
Q ss_pred CCCCCCChhhhhcCcCCCEEEecCCCCCCC
Q 038019 171 CGAGGEIPSTFAKLRNMQTLWASDNPFTGK 200 (866)
Q Consensus 171 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 200 (866)
|++++..+..|..+++|++|+|++|.++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 777666666666666666666666666543
No 192
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.41 E-value=3.8e-14 Score=164.71 Aligned_cols=138 Identities=22% Similarity=0.277 Sum_probs=97.1
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRAS 715 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p 715 (866)
|......|++..++...++.|||.++.+....+ ....+..++..|+|||.+..+.++.|+|||||||++|||+| |+.|
T Consensus 386 HrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P 464 (535)
T 2h8h_A 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464 (535)
T ss_dssp CSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH-HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCS
T ss_pred CCCCCHhhEEEcCCCcEEEcccccceecCCCce-ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 333334477777777889999999998764322 11223457789999999999999999999999999999999 9999
Q ss_pred CCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 716 SDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
+......+ +.+. +..+.. ..... .....+.+++..||+.+|++||+|.+|+++|+.....
T Consensus 465 ~~~~~~~~---~~~~----i~~~~~-----~~~~~---~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 465 YPGMVNRE---VLDQ----VERGYR-----MPCPP---ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp STTCCHHH---HHHH----HHTTCC-----CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred CCCCCHHH---HHHH----HHcCCC-----CCCCC---CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 87544322 2221 222211 01111 1123455677799999999999999999999976544
No 193
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.40 E-value=1.9e-14 Score=159.16 Aligned_cols=133 Identities=22% Similarity=0.257 Sum_probs=90.8
Q ss_pred CcccCH---HHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCC
Q 038019 643 PNIFGY---AELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDK 718 (866)
Q Consensus 643 ~~~~~~---~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~ 718 (866)
.|++.. .....++.|||.++.+...++........||+.|+|||.+..+.++.++|||||||+++||+| |+.|+..
T Consensus 210 ~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~ 289 (367)
T 3l9p_A 210 RNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 289 (367)
T ss_dssp GGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred hhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 355554 233467899999887654333222223467899999999999999999999999999999998 9999875
Q ss_pred CchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 719 SLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 719 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
....+ +.+.+ ..+.. +.... .....+.+++..|++.+|++||++.||++.|+.....
T Consensus 290 ~~~~~---~~~~i----~~~~~-----~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 290 KSNQE---VLEFV----TSGGR-----MDPPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp CCHHH---HHHHH----HTTCC-----CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCHHH---HHHHH----HcCCC-----CCCCc---cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 43322 22222 11111 11111 1122355677799999999999999999999865443
No 194
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=1.2e-12 Score=128.18 Aligned_cols=106 Identities=20% Similarity=0.244 Sum_probs=76.3
Q ss_pred EEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCC
Q 038019 68 TKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTN 147 (866)
Q Consensus 68 ~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 147 (866)
+.++++++.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56777777774 5665554 67888888888887777777778888888888888877655556677777777777777
Q ss_pred CCCCCCchhhcCCCCccEEEeecCCCCCC
Q 038019 148 NFSGALPPELGNLAKLEQLYIDSCGAGGE 176 (866)
Q Consensus 148 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 176 (866)
++++..+..|..+++|++|+|++|.+...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 77765555577777777777777766543
No 195
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.40 E-value=4.3e-14 Score=152.43 Aligned_cols=136 Identities=18% Similarity=0.175 Sum_probs=91.8
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeE------------EEeecCCCCccCceeeecCCCCchhHHHHHHH
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPV------------YKVTANSYGYLAPEYAMRGHLTEKADVFSFGV 704 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~v------------y~~~~gt~gY~aPE~~~~~~~t~ksDVySfGv 704 (866)
|......|++...+...++.|||.++.+........ .....||++|+|||.+.+..++.++|||||||
T Consensus 131 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~ 210 (310)
T 3s95_A 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGI 210 (310)
T ss_dssp CSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHH
T ss_pred CCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHH
Confidence 333344477777777788999999988765432211 01346999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCchhhh---hcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 038019 705 VALEIISGRASSDKSLDMEK---IYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVV 781 (866)
Q Consensus 705 vLlEl~tg~~p~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~ 781 (866)
+++||++|+.|+........ .....+... .. +......+.+++..|++.||++||+|.||+
T Consensus 211 ~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-------------~~---~~~~~~~l~~li~~~l~~dP~~Rps~~~l~ 274 (310)
T 3s95_A 211 VLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR-------------YC---PPNCPPSFFPITVRCCDLDPEKRPSFVKLE 274 (310)
T ss_dssp HHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH-------------TC---CTTCCTTHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHhcCCCCCcchhhhHHHHhhhhhccccc-------------cC---CCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 99999999998764332111 111111110 00 011112355677799999999999999999
Q ss_pred HHHhcCc
Q 038019 782 AMLAGDI 788 (866)
Q Consensus 782 ~~L~~~~ 788 (866)
+.|+...
T Consensus 275 ~~L~~l~ 281 (310)
T 3s95_A 275 HWLETLR 281 (310)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998543
No 196
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.40 E-value=6.4e-14 Score=155.10 Aligned_cols=134 Identities=20% Similarity=0.312 Sum_probs=82.8
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeE--EEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPV--YKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSD 717 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~v--y~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~ 717 (866)
...|++...+...++.|||.++.+....+... ..+..+|++|+|||.+..+.++.++|||||||++|||+| |+.|+.
T Consensus 219 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~ 298 (373)
T 3c1x_A 219 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 298 (373)
T ss_dssp CGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCT
T ss_pred chheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCC
Confidence 33477777777788999999988765543322 234567889999999999999999999999999999999 666765
Q ss_pred CCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 718 KSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 718 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
..... .+...+. .+.. ...| ... ...+.+++..||+.+|++||++.||++.|+....
T Consensus 299 ~~~~~---~~~~~~~----~~~~--~~~p---~~~---~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 299 DVNTF---DITVYLL----QGRR--LLQP---EYC---PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp TSCSS---CHHHHHH----TTCC--CCCC---TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCHH---HHHHHHH----cCCC--CCCC---CCC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 43322 2222221 1111 1111 111 2245566779999999999999999999986543
No 197
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.40 E-value=1e-13 Score=149.56 Aligned_cols=133 Identities=18% Similarity=0.249 Sum_probs=94.6
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~ 720 (866)
..|++...+...++.|||.+..++............||++|+|||.+....++.++||||||++++||+| |+.|+....
T Consensus 173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 252 (313)
T 1t46_A 173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP 252 (313)
T ss_dssp GGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence 3467766667778999999998876654333334467889999999999999999999999999999999 999987543
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
.... +. .....+ ..+...... ...+.+++..|++.||++||++.||+++|+..+
T Consensus 253 ~~~~--~~----~~~~~~-----~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 253 VDSK--FY----KMIKEG-----FRMLSPEHA---PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp SSHH--HH----HHHHHT-----CCCCCCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred chhH--HH----HHhccC-----CCCCCcccC---CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 2211 11 111111 111111111 234555667999999999999999999998654
No 198
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.40 E-value=8.9e-14 Score=151.57 Aligned_cols=137 Identities=18% Similarity=0.214 Sum_probs=96.1
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRAS 715 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p 715 (866)
|......|++...+...++.|||.+..+.............||++|+|||.+.+..++.++|||||||+++||+| |+.|
T Consensus 187 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 266 (333)
T 2i1m_A 187 HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266 (333)
T ss_dssp CSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred cCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCC
Confidence 333333477777777788999999998876544333444567889999999999999999999999999999999 9999
Q ss_pred CCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 716 SDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
+....... .+.. ....+. .+....... ..+.+++..|++.+|++||++.||++.|+..
T Consensus 267 ~~~~~~~~--~~~~----~~~~~~-----~~~~~~~~~---~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 267 YPGILVNS--KFYK----LVKDGY-----QMAQPAFAP---KNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp STTCCSSH--HHHH----HHHHTC-----CCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CcccchhH--HHHH----HHhcCC-----CCCCCCCCC---HHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 87543222 1111 111111 111111112 3455667799999999999999999999853
No 199
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.39 E-value=7.5e-14 Score=165.19 Aligned_cols=135 Identities=20% Similarity=0.174 Sum_probs=92.0
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCC-ceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGG-YGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRA 714 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~-~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~ 714 (866)
|......|++...+...++.|||.++.+..+. +........+|++|+|||++....++.|+|||||||+++||+| |+.
T Consensus 492 HrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~ 571 (635)
T 4fl3_A 492 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 571 (635)
T ss_dssp CSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 33334447777777788999999999886543 1222233457889999999999999999999999999999999 999
Q ss_pred CCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 038019 715 SSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAG 786 (866)
Q Consensus 715 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~ 786 (866)
|+......+ + ...+..+.. +... ......+.+++..||+.||++||+|.+|+++|+.
T Consensus 572 Pf~~~~~~~---~----~~~i~~~~~-----~~~p---~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 628 (635)
T 4fl3_A 572 PYRGMKGSE---V----TAMLEKGER-----MGCP---AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 628 (635)
T ss_dssp SSTTCCHHH---H----HHHHHTTCC-----CCCC---TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCCCCHHH---H----HHHHHcCCC-----CCCC---CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 997654322 1 222222211 1111 1122345667779999999999999999999985
No 200
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.39 E-value=1.1e-13 Score=147.99 Aligned_cols=139 Identities=19% Similarity=0.151 Sum_probs=88.0
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCc-eeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGY-GPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~-g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
...|++...+...++.|||.++.++.... ........+|..|+|||.+....++.++||||||++++||+||+.|+...
T Consensus 141 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~ 220 (295)
T 3ugc_A 141 ATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 220 (295)
T ss_dssp SGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSH
T ss_pred CHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCC
Confidence 33477777777788999999998865432 12222335777899999999999999999999999999999999987642
Q ss_pred chhh---------hhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 720 LDME---------KIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 720 ~~~~---------~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
.... ......++......+.. +.. +......+.+++..||+.+|++|||+.||+++|+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l 289 (295)
T 3ugc_A 221 PAEFMRMIGNDKQGQMIVFHLIELLKNNGR-----LPR---PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289 (295)
T ss_dssp HHHHHHHHCTTCCTHHHHHHHHHHHHTTCC-----CCC---CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred hHHHHhhhcCccccchhHHHHHHHHhccCc-----CCC---CcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 2110 00111122222222111 111 111223455677799999999999999999999854
No 201
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.39 E-value=1.2e-13 Score=149.08 Aligned_cols=133 Identities=21% Similarity=0.280 Sum_probs=86.3
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKS 719 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~ 719 (866)
...|++...+...++.|||.++.+..+..........++..|+|||......++.++||||||++++||+| |+.|+...
T Consensus 174 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 253 (313)
T 3brb_A 174 AARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV 253 (313)
T ss_dssp SGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC
Confidence 33467777777788999999988876554333334467889999999999999999999999999999999 88888754
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
...+ +...+.. +. .+.... .....+.+++..|++.+|++||++.+|++.|+...
T Consensus 254 ~~~~---~~~~~~~----~~-----~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 254 QNHE---MYDYLLH----GH-----RLKQPE---DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp CGGG---HHHHHHT----TC-----CCCCBT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHH---HHHHHHc----CC-----CCCCCc---cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 3322 2222211 11 011111 11234556677999999999999999999998654
No 202
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.39 E-value=1.1e-13 Score=151.15 Aligned_cols=151 Identities=14% Similarity=0.086 Sum_probs=96.3
Q ss_pred hccCCCCCcccCHHHHHHHhcCCccccccCCCCc------eeEEEeecCCCCccCceeeec-------CCCCchhHHHHH
Q 038019 636 LVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGY------GPVYKVTANSYGYLAPEYAMR-------GHLTEKADVFSF 702 (866)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~------g~vy~~~~gt~gY~aPE~~~~-------~~~t~ksDVySf 702 (866)
.+......|++...+...++.|||.+..+..... ........||..|+|||.+.+ ..++.++|||||
T Consensus 142 vH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Diwsl 221 (336)
T 3g2f_A 142 SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYAL 221 (336)
T ss_dssp ECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHH
T ss_pred eecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHH
Confidence 3333344477777777888999999988764332 111223469999999999876 567789999999
Q ss_pred HHHHHHHHhcCCCCCCCchhhhh-c----------HHHHHHHHhhcCCcccccCCcccc---cCHHHHHHHHHHHHHccC
Q 038019 703 GVVALEIISGRASSDKSLDMEKI-Y----------LLEWAWNLHENNQSFGLVDPTLTE---FNDKEALRVIGVALLCTQ 768 (866)
Q Consensus 703 GvvLlEl~tg~~p~~~~~~~~~~-~----------l~~~~~~~~~~~~~~~~~d~~l~~---~~~~~~~~~~~la~~C~~ 768 (866)
||+++||+||+.|+......... . ..+......... ...+.+.+ ........+.+++..|++
T Consensus 222 G~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (336)
T 3g2f_A 222 GLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSRE----KQRPKFPEAWKENSLAVRSLKETIEDCWD 297 (336)
T ss_dssp HHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTS----CCCCCCCTTCCCCSHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhccc----ccCCCCCcccccccchHHHHHHHHHHHhc
Confidence 99999999998775432211100 0 000111111111 11122211 122345567778889999
Q ss_pred CCCCCCCCHHHHHHHHhcCcCC
Q 038019 769 TSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 769 ~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
.||++|||+.||++.|+.....
T Consensus 298 ~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 298 QDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHC
T ss_pred CChhhCcchHHHHHHHHHHHHH
Confidence 9999999999999999975543
No 203
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.38 E-value=1.5e-13 Score=144.69 Aligned_cols=131 Identities=19% Similarity=0.269 Sum_probs=93.2
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~ 720 (866)
..|++...+...++.|||.+..+..+.. ....+..+|..|+|||......++.++||||||++++||+| |+.|++...
T Consensus 132 p~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 210 (268)
T 3sxs_A 132 ARNCLVDRDLCVKVSDFGMTRYVLDDQY-VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT 210 (268)
T ss_dssp GGGEEECTTCCEEECCTTCEEECCTTCE-EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCCEEEccCccceecchhhh-hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC
Confidence 3466766677788999999988876543 22345567788999999998899999999999999999999 999987544
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
..+. . .. ...+. ....| ....+ .+.++...|++.+|++|||+.||++.|+...
T Consensus 211 ~~~~---~---~~-~~~~~--~~~~~---~~~~~---~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 211 NSEV---V---LK-VSQGH--RLYRP---HLASD---TIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp HHHH---H---HH-HHTTC--CCCCC---TTSCH---HHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred hHHH---H---HH-HHcCC--CCCCC---CcChH---HHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 3221 1 11 11111 11111 11122 3555667999999999999999999998643
No 204
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.38 E-value=1.9e-13 Score=147.59 Aligned_cols=134 Identities=20% Similarity=0.209 Sum_probs=95.2
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKS 719 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~ 719 (866)
...|++...+...++.|||.++.+.............||.+|+|||.+.+..++.++||||||++++||+| |+.|+...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 33477777777788999999988866543333334567899999999999999999999999999999998 99998754
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
...+. + ......+.. +...... ...+.+++..|++.+|++||++.||++.|+...
T Consensus 255 ~~~~~--~----~~~~~~~~~-----~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 255 KIDEE--F----CRRLKEGTR-----MRAPDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp CCSHH--H----HHHHHHTCC-----CCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred chhHH--H----HHHhccCcc-----CCCCCCC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 32211 1 111221111 1111111 223556667999999999999999999998644
No 205
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.38 E-value=2e-14 Score=154.34 Aligned_cols=148 Identities=13% Similarity=0.062 Sum_probs=89.6
Q ss_pred hccCCCCCcccCHHHHHHHhcCCccccccCCCCcee--EEEeecCCCCccCceeeecC------CCCchhHHHHHHHHHH
Q 038019 636 LVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGP--VYKVTANSYGYLAPEYAMRG------HLTEKADVFSFGVVAL 707 (866)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~--vy~~~~gt~gY~aPE~~~~~------~~t~ksDVySfGvvLl 707 (866)
.|......|++...+...++.|||.+..+....... ......||.+|+|||.+... .++.++|||||||+++
T Consensus 130 vH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~ 209 (303)
T 3gxj_A 130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 209 (303)
T ss_dssp CCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-
T ss_pred eeCcCCHHHeEECCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHH
Confidence 333333447777777788999999998776544321 12334699999999998765 4557999999999999
Q ss_pred HHHhc----------CCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccc--cCHHHHHHHHHHHHHccCCCCCCCC
Q 038019 708 EIISG----------RASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTE--FNDKEALRVIGVALLCTQTSPMMRP 775 (866)
Q Consensus 708 El~tg----------~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~la~~C~~~~p~~RP 775 (866)
||+|| +.|+........ ...+. ..... .....+.+.. ...+....+.+++..||+.||++||
T Consensus 210 el~~g~~~~~~~~~~~~p~~~~~~~~~-~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 283 (303)
T 3gxj_A 210 EIARRCSIGGIHEDYQLPYYDLVPSDP-SVEEM-RKVVC----EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARL 283 (303)
T ss_dssp CTGGGBCBTTBC-CCCCTTTTTCC-CC-CCC-C-HHHHT----TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSC
T ss_pred HHHhcCCCccccceeeccccccCCCCc-cHHHH-HHHHH----HhhcCCCccccccchhhHHHHHHHHHHHhccCcccCC
Confidence 99999 555543221110 00000 01111 1122333321 1224566778888999999999999
Q ss_pred CHHHHHHHHhcCcC
Q 038019 776 PMSRVVAMLAGDIE 789 (866)
Q Consensus 776 sm~~V~~~L~~~~~ 789 (866)
|+.||+++|+....
T Consensus 284 s~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 284 TALRIKKTLSQLSQ 297 (303)
T ss_dssp CHHHHHHHHHC-CC
T ss_pred CHHHHHHHHHHhhh
Confidence 99999999996544
No 206
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.38 E-value=8.4e-14 Score=150.28 Aligned_cols=132 Identities=19% Similarity=0.195 Sum_probs=93.3
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~ 720 (866)
..|++...+...++.|||.++.+.............+|++|+|||...+..++.++|||||||+++||+| |+.|+....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 3467776666788999999988765433222233457889999999999999999999999999999999 999987644
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
... +...+ ..+.. +.... .....+.+++..|++.||++||++.||++.|+...
T Consensus 258 ~~~---~~~~~----~~~~~-----~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 258 PER---LFNLL----KTGHR-----MERPD---NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp GGG---HHHHH----HTTCC-----CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHH---HHHHh----hcCCc-----CCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 322 22221 11111 11111 11234556677999999999999999999998643
No 207
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.38 E-value=1.9e-13 Score=149.90 Aligned_cols=78 Identities=24% Similarity=0.271 Sum_probs=57.3
Q ss_pred CcccCHHH-HHHHhcCCccccccCCCCce--------------------------eEEEeecCCCCccCceeeecC-CCC
Q 038019 643 PNIFGYAE-LRSATKDFNRSNKLGEGGYG--------------------------PVYKVTANSYGYLAPEYAMRG-HLT 694 (866)
Q Consensus 643 ~~~~~~~~-~~~~~~dF~~~~~lg~g~~g--------------------------~vy~~~~gt~gY~aPE~~~~~-~~t 694 (866)
.|++...+ ...++.|||+++........ ......+||++|||||.+.+. .++
T Consensus 146 eNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~ 225 (361)
T 4f9c_A 146 SNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQT 225 (361)
T ss_dssp GGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCC
T ss_pred HHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCC
Confidence 36665544 35678999999876543210 112234799999999998765 589
Q ss_pred chhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 695 EKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 695 ~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
.++||||+||+++||+||+.||....
T Consensus 226 ~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 226 TAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp THHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred CccchhhhHHHHHHHHHCCCCCCCCC
Confidence 99999999999999999999996543
No 208
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.38 E-value=7.6e-14 Score=148.22 Aligned_cols=130 Identities=18% Similarity=0.206 Sum_probs=80.6
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~ 720 (866)
..|++...+...++.|||.++.+........ ....+|+.|+|||.+....++.++||||||++++||++ |+.|+....
T Consensus 144 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~ 222 (281)
T 1mp8_A 144 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222 (281)
T ss_dssp GGGEEEEETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred HHHEEECCCCCEEECccccccccCccccccc-ccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC
Confidence 3466666666778999999988866543222 22356789999999998999999999999999999997 999987544
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
..+ +...+. .+.. +.+... ....+.+++..|++.+|++||++.||++.|+..
T Consensus 223 ~~~---~~~~i~----~~~~-----~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 223 NND---VIGRIE----NGER-----LPMPPN---CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp GGG---HHHHHH----TTCC-----CCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHH---HHHHHH----cCCC-----CCCCCC---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 322 222221 1111 111111 123355566799999999999999999999854
No 209
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.38 E-value=2.6e-13 Score=158.12 Aligned_cols=116 Identities=19% Similarity=0.181 Sum_probs=83.4
Q ss_pred HHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHH
Q 038019 651 LRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEW 730 (866)
Q Consensus 651 ~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~ 730 (866)
...++.|||+++.+..+. .++..+||+.|||||.+.+..++.++||||+||+++||++|+.||......+ ....
T Consensus 294 ~~vKl~DFG~a~~~~~~~---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~---~~~~ 367 (573)
T 3uto_A 294 NELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE---TLRN 367 (573)
T ss_dssp CCEEECCCSSCEECCTTS---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHHH
T ss_pred CCEEEeeccceeEccCCC---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH---HHHH
Confidence 346889999999987654 3455689999999999999999999999999999999999999997644322 2211
Q ss_pred HHHHhhcCCcccccCCcc-cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 731 AWNLHENNQSFGLVDPTL-TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 731 ~~~~~~~~~~~~~~d~~l-~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
+ ..+.. .+++.. .... ++ +.++...|++.||++|||+.|+++
T Consensus 368 i----~~~~~--~~~~~~~~~~s-~~---~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 368 V----KSCDW--NMDDSAFSGIS-ED---GKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp H----HTTCC--CCCSGGGTTSC-HH---HHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred H----HhCCC--CCCcccccCCC-HH---HHHHHHHHccCChhHCcCHHHHhc
Confidence 1 11111 011111 1222 23 344566999999999999999976
No 210
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.38 E-value=1.6e-13 Score=150.96 Aligned_cols=142 Identities=12% Similarity=0.097 Sum_probs=94.3
Q ss_pred CCcccCHHHH--HHHhcCCccccccCCCCceeEE-----EeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCC
Q 038019 642 KPNIFGYAEL--RSATKDFNRSNKLGEGGYGPVY-----KVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRA 714 (866)
Q Consensus 642 ~~~~~~~~~~--~~~~~dF~~~~~lg~g~~g~vy-----~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~ 714 (866)
..|++...+. ..++.|||.++.+...+....+ ....||..|+|||.+.+..++.++|||||||+++||+||+.
T Consensus 187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 266 (352)
T 2jii_A 187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL 266 (352)
T ss_dssp GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 3466666665 6789999999887654321111 22368999999999999999999999999999999999999
Q ss_pred CCCCCchhhhhcHHHHHHHHhhcCCcccccCCccc-ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 715 SSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLT-EFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 715 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
|+....... ..+..+...... ......++... .... ..+.+++..|++.||++||++.+|+++|+....
T Consensus 267 pf~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 336 (352)
T 2jii_A 267 PWTNCLPNT-EDIMKQKQKFVD--KPGPFVGPCGHWIRPS---ETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQ 336 (352)
T ss_dssp TTGGGTTCH-HHHHHHHHHHHH--SCCCEECTTSCEECCC---HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred CcccCCcCH-HHHHHHHHhccC--ChhhhhhhccccCCCc---HHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHH
Confidence 987543111 112222221111 11112222111 1112 335556669999999999999999999986544
No 211
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.38 E-value=4.3e-13 Score=142.79 Aligned_cols=117 Identities=26% Similarity=0.377 Sum_probs=82.3
Q ss_pred HHhcCCccccccCCCCceeEEEeecCCCCccCceee--ecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHH
Q 038019 653 SATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYA--MRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEW 730 (866)
Q Consensus 653 ~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~--~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~ 730 (866)
.++.|||.++..... .....||..|+|||.+ ....++.++|||||||+++||+||+.|+....... ......
T Consensus 168 ~kl~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~ 241 (287)
T 4f0f_A 168 AKVADFGLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-IKFINM 241 (287)
T ss_dssp EEECCCTTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH-HHHHHH
T ss_pred EEeCCCCcccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH-HHHHHH
Confidence 678999998865542 3445799999999998 45668999999999999999999999997544322 111111
Q ss_pred HHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 038019 731 AWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAG 786 (866)
Q Consensus 731 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~ 786 (866)
. ...+ ..+.+.... ...+.+++..|++.||++||++.||++.|+.
T Consensus 242 ~---~~~~-----~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 242 I---REEG-----LRPTIPEDC---PPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp H---HHSC-----CCCCCCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred H---hccC-----CCCCCCccc---CHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 1 1111 112221111 2345566679999999999999999999974
No 212
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.38 E-value=2.3e-13 Score=145.87 Aligned_cols=125 Identities=17% Similarity=0.183 Sum_probs=87.3
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchh
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDM 722 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~ 722 (866)
.|++...+...++.|||.+..+..... ......||+.|+|||.+....++.++|||||||+++||+||+.|+......
T Consensus 145 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 222 (297)
T 3fxz_A 145 DNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222 (297)
T ss_dssp GGEEECTTCCEEECCCTTCEECCSTTC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred HHEEECCCCCEEEeeCCCceecCCccc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 466666666788999999887765432 233457999999999999999999999999999999999999999754332
Q ss_pred hhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 723 EKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 723 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.. .......+.. .. ...... ...+.++...|++.||++|||+.|+++
T Consensus 223 ~~------~~~~~~~~~~-~~---~~~~~~---~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 223 RA------LYLIATNGTP-EL---QNPEKL---SAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HH------HHHHHHHCSC-CC---SCGGGS---CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HH------HHHHHhCCCC-CC---CCcccc---CHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 21 1111111110 01 011111 223455667999999999999999975
No 213
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.37 E-value=1.6e-13 Score=149.63 Aligned_cols=149 Identities=15% Similarity=0.109 Sum_probs=95.0
Q ss_pred hccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEE--EeecCCCCccCceeeecCCCCch------hHHHHHHHHHH
Q 038019 636 LVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVY--KVTANSYGYLAPEYAMRGHLTEK------ADVFSFGVVAL 707 (866)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy--~~~~gt~gY~aPE~~~~~~~t~k------sDVySfGvvLl 707 (866)
.|......|++...+...++.|||.+..+........+ ....||.+|+|||.+.....+.+ +|||||||++|
T Consensus 164 vH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~ 243 (337)
T 3mdy_A 164 AHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILW 243 (337)
T ss_dssp ECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHH
T ss_pred EecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHH
Confidence 34333444777777778889999999877654322211 23479999999999887666554 99999999999
Q ss_pred HHHhc----------CCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccc--cCHHHHHHHHHHHHHccCCCCCCCC
Q 038019 708 EIISG----------RASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTE--FNDKEALRVIGVALLCTQTSPMMRP 775 (866)
Q Consensus 708 El~tg----------~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~la~~C~~~~p~~RP 775 (866)
||+|| +.|+....... ..... ....... ....+.... ...+....+.+++..|++.||++||
T Consensus 244 el~tg~~~~~~~~~~~~p~~~~~~~~-~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp 317 (337)
T 3mdy_A 244 EVARRCVSGGIVEEYQLPYHDLVPSD-PSYED-MREIVCI----KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRL 317 (337)
T ss_dssp HHHTTBCBTTBCCCCCCTTTTTSCSS-CCHHH-HHHHHTT----SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSC
T ss_pred HHHhccCcccccccccccHhhhcCCC-Cchhh-hHHHHhh----hccCccccccchhhHHHHHHHHHHHHhhhhChhhCC
Confidence 99999 55654332211 11111 1111111 112232211 1224556677888899999999999
Q ss_pred CHHHHHHHHhcCcCC
Q 038019 776 PMSRVVAMLAGDIEV 790 (866)
Q Consensus 776 sm~~V~~~L~~~~~~ 790 (866)
++.||++.|+.....
T Consensus 318 s~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 318 TALRVKKTLAKMSES 332 (337)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhh
Confidence 999999999865443
No 214
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.37 E-value=1.1e-13 Score=149.12 Aligned_cols=140 Identities=14% Similarity=0.050 Sum_probs=92.0
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASS 716 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~ 716 (866)
|......|++...+...++.|||.++.++.... .....||..|+|||.+..+.++.++|||||||+++||+||+.|+
T Consensus 143 H~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf 219 (308)
T 3g33_A 143 HRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 219 (308)
T ss_dssp CSCCCTTTEEECTTSCEEECSCSCTTTSTTCCC---SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSC
T ss_pred cCCCCHHHEEEcCCCCEEEeeCccccccCCCcc---cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCC
Confidence 333344477777777788999999988765432 23457899999999999999999999999999999999999999
Q ss_pred CCCchhhhhcHHHHHHHHhh---cCCccc-------ccCCcc----cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 717 DKSLDMEKIYLLEWAWNLHE---NNQSFG-------LVDPTL----TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 717 ~~~~~~~~~~l~~~~~~~~~---~~~~~~-------~~d~~l----~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
......+ ....+..... .....+ .+.+.. .....+....+.++...|++.||++|||+.|+++
T Consensus 220 ~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 220 CGNSEAD---QLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CCSSHHH---HHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCHHH---HHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 7654332 2222222111 110000 000000 0000111234556777999999999999999875
No 215
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.37 E-value=2.1e-12 Score=126.42 Aligned_cols=105 Identities=18% Similarity=0.283 Sum_probs=80.0
Q ss_pred CEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecC
Q 038019 92 TVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSC 171 (866)
Q Consensus 92 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n 171 (866)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67889888886 5676554 78888888888888877888888888888888888888665556677777777777777
Q ss_pred CCCCCChhhhhcCcCCCEEEecCCCCCC
Q 038019 172 GAGGEIPSTFAKLRNMQTLWASDNPFTG 199 (866)
Q Consensus 172 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 199 (866)
++++..+..|..+++|++|+|++|.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 7776655567777777777777776653
No 216
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.37 E-value=8.1e-14 Score=151.07 Aligned_cols=133 Identities=20% Similarity=0.281 Sum_probs=91.7
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~ 720 (866)
..|++...+...++.|||.++.+....+........||.+|+|||.+.++.++.++||||||++++||+| |+.|+....
T Consensus 166 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 245 (322)
T 1p4o_A 166 ARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245 (322)
T ss_dssp GGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC
T ss_pred cceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC
Confidence 3467776677788999999987765432111112246789999999999999999999999999999999 888887543
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
..+ +... ...+.... ..... ...+.++...|++.+|++||++.||++.|+....
T Consensus 246 ~~~---~~~~----~~~~~~~~----~~~~~----~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 246 NEQ---VLRF----VMEGGLLD----KPDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHH---HHHH----HHTTCCCC----CCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHH---HHHH----HHcCCcCC----CCCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 221 2211 11121111 00111 2235556679999999999999999999986544
No 217
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.37 E-value=1.9e-13 Score=146.15 Aligned_cols=136 Identities=18% Similarity=0.228 Sum_probs=88.8
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
..|++...+...++.|||.+..++.... .......||+.|+|||.+.+..++.++|||||||+++||+||+.|+.....
T Consensus 139 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~ 217 (294)
T 4eqm_A 139 PQNILIDSNKTLKIFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA 217 (294)
T ss_dssp GGGEEECTTSCEEECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH
T ss_pred HHHEEECCCCCEEEEeCCCccccccccc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 3467766666788999999988865432 223345699999999999999999999999999999999999999975432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcc-cccCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhcCcCC
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTL-TEFNDKEALRVIGVALLCTQTSPMMRP-PMSRVVAMLAGDIEV 790 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~~~~la~~C~~~~p~~RP-sm~~V~~~L~~~~~~ 790 (866)
.. ......... . +.. .....+....+.++..+|++.||++|| ++.++.+.|+.....
T Consensus 218 ~~------~~~~~~~~~-~-----~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 218 VS------IAIKHIQDS-V-----PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp HH------HHHHHHSSC-C-----CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred HH------HHHHHhhcc-C-----CCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 21 111211111 0 111 011111123455677799999999998 899999999865543
No 218
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.36 E-value=1.5e-13 Score=149.78 Aligned_cols=134 Identities=20% Similarity=0.245 Sum_probs=86.3
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCce-eEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCC
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYG-PVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKS 719 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g-~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~ 719 (866)
..|++...+...++.|||.++.++..... ....+..+|..|+|||.+....++.++|||||||+++||+| |+.|+...
T Consensus 175 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~ 254 (333)
T 1mqb_A 175 ARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL 254 (333)
T ss_dssp GGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred hheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC
Confidence 34677766777889999999887654321 11223356889999999999999999999999999999999 99998754
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
...+ +.. ....+.. +.... .....+.+++..||+.+|++||+|.+|+++|+.....
T Consensus 255 ~~~~---~~~----~~~~~~~-----~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 255 SNHE---VMK----AINDGFR-----LPTPM---DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp CHHH---HHH----HHHTTCC-----CCCCT---TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CHHH---HHH----HHHCCCc-----CCCcc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 3322 221 1122110 11111 1123455677799999999999999999999875543
No 219
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.36 E-value=1.3e-13 Score=148.88 Aligned_cols=125 Identities=24% Similarity=0.299 Sum_probs=84.1
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASS 716 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~ 716 (866)
+......|++...+...++.|||.+..++.... .....||++|+|||++.+ .++.++|||||||+++||+||+.|+
T Consensus 180 H~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~ 255 (311)
T 3p1a_A 180 HLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA---GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELP 255 (311)
T ss_dssp CCCCSGGGEEECGGGCEEECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCC
T ss_pred cCCCCHHHEEECCCCCEEEccceeeeecccCCC---CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCC
Confidence 333334477877888889999999988765433 334568999999998764 7999999999999999999998775
Q ss_pred CCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 717 DKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 717 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
... +. | ..+..+ ...+.+... ....+.+++..|++.||++|||+.|+++
T Consensus 256 ~~~---~~-----~--~~~~~~----~~~~~~~~~---~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 256 HGG---EG-----W--QQLRQG----YLPPEFTAG---LSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp SSH---HH-----H--HHHTTT----CCCHHHHTT---SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCc---cH-----H--HHHhcc----CCCcccccC---CCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 431 10 1 111111 111111111 1234556677999999999999999985
No 220
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.36 E-value=2e-13 Score=148.87 Aligned_cols=132 Identities=19% Similarity=0.215 Sum_probs=94.0
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCCch
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKSLD 721 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~~ 721 (866)
.|++...+...++.|||.+..++............+|++|+|||.+.+..++.++|||||||+++||+| |+.|+.....
T Consensus 186 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 265 (334)
T 2pvf_A 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265 (334)
T ss_dssp GGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred ceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH
Confidence 467766666788999999988876544333334457889999999998899999999999999999999 9999875432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
.+ +...+ ..+.. +.... .....+.+++..|++.+|++||++.||++.|+....
T Consensus 266 ~~---~~~~~----~~~~~-----~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 266 EE---LFKLL----KEGHR-----MDKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp HH---HHHHH----HHTCC-----CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH---HHHHH----hcCCC-----CCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 22 22221 11111 11111 112345566679999999999999999999997554
No 221
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.36 E-value=1.8e-13 Score=148.34 Aligned_cols=126 Identities=15% Similarity=0.208 Sum_probs=87.6
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
..|++...+...++.|||.+..+..... ......||.+|+|||++.++.++.++|||||||+++||+||+.|+.....
T Consensus 169 p~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~ 246 (321)
T 2c30_A 169 SDSILLTLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP 246 (321)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred HHHEEECCCCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 3467766666788999999888765421 12345799999999999999999999999999999999999999975432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.. ....+.. . ..+.+.. .......+.++...|++.||++||++.||++
T Consensus 247 ~~---~~~~~~~----~-----~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 247 VQ---AMKRLRD----S-----PPPKLKN-SHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp HH---HHHHHHH----S-----SCCCCTT-GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HH---HHHHHhc----C-----CCCCcCc-cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 21 1222111 1 1122210 0011123445666999999999999999986
No 222
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.36 E-value=2.4e-13 Score=148.58 Aligned_cols=146 Identities=14% Similarity=0.071 Sum_probs=97.7
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCcee--EEEeecCCCCccCceeeecC------CCCchhHHHHHHHHHHH
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGP--VYKVTANSYGYLAPEYAMRG------HLTEKADVFSFGVVALE 708 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~--vy~~~~gt~gY~aPE~~~~~------~~t~ksDVySfGvvLlE 708 (866)
|......|++...+...++.|||.+..+....... ......||..|+|||.+... .++.++|||||||+++|
T Consensus 170 H~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~e 249 (342)
T 1b6c_B 170 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 249 (342)
T ss_dssp CSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHH
Confidence 33333347777777778899999998876544211 12334799999999998765 34479999999999999
Q ss_pred HHhc----------CCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccc--cCHHHHHHHHHHHHHccCCCCCCCCC
Q 038019 709 IISG----------RASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTE--FNDKEALRVIGVALLCTQTSPMMRPP 776 (866)
Q Consensus 709 l~tg----------~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~~~la~~C~~~~p~~RPs 776 (866)
|+|| +.|+....... .....+...... +..++.+.. ...+....+.+++.+||+.+|++||+
T Consensus 250 l~tg~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 323 (342)
T 1b6c_B 250 IARRCSIGGIHEDYQLPYYDLVPSD-PSVEEMRKVVCE-----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 323 (342)
T ss_dssp HHTTBCBTTBCCCCCCTTTTTSCSS-CCHHHHHHHHTT-----SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCC
T ss_pred HHhccCcCCcccccccCccccCcCc-ccHHHHHHHHHH-----HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCC
Confidence 9999 66765432211 122222222111 123333321 12345567778889999999999999
Q ss_pred HHHHHHHHhcCc
Q 038019 777 MSRVVAMLAGDI 788 (866)
Q Consensus 777 m~~V~~~L~~~~ 788 (866)
|.||++.|+...
T Consensus 324 ~~~i~~~L~~i~ 335 (342)
T 1b6c_B 324 ALRIKKTLSQLS 335 (342)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998643
No 223
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.36 E-value=3.4e-13 Score=153.37 Aligned_cols=127 Identities=19% Similarity=0.229 Sum_probs=89.6
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKS 719 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~ 719 (866)
...|++...+...++.|||.++...... ....+++.|+|||.+..+.++.|+|||||||++|||+| |+.|+...
T Consensus 316 kp~Nill~~~~~~kl~DfG~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~ 390 (450)
T 1k9a_A 316 AARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 390 (450)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTS
T ss_pred CHhhEEECCCCCEEEeeCCCcccccccc-----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 3347777777778899999988654321 12257899999999999999999999999999999999 99998754
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
...+ +...+ ..+.. +.... .....+.+++..||+.+|++||||.+|++.|+..
T Consensus 391 ~~~~---~~~~i----~~~~~-----~~~p~---~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i 443 (450)
T 1k9a_A 391 PLKD---VVPRV----EKGYK-----MDAPD---GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443 (450)
T ss_dssp CTTT---HHHHH----HTTCC-----CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CHHH---HHHHH----HcCCC-----CCCCC---cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 4322 22222 22211 11111 1223455667799999999999999999999853
No 224
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.36 E-value=1.7e-13 Score=144.58 Aligned_cols=119 Identities=18% Similarity=0.290 Sum_probs=77.3
Q ss_pred HHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHH
Q 038019 650 ELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLE 729 (866)
Q Consensus 650 ~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~ 729 (866)
+...++.|||.+..+..... ....||.+|+|||...+..++.++||||||++++||+||+.|+........
T Consensus 152 ~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----- 222 (271)
T 3dtc_A 152 NKILKITDFGLAREWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV----- 222 (271)
T ss_dssp SCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH-----
T ss_pred CcceEEccCCcccccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----
Confidence 34467889999887765432 234689999999999999999999999999999999999999975432211
Q ss_pred HHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 038019 730 WAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAG 786 (866)
Q Consensus 730 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~ 786 (866)
........ ..+..... ....+.+++..|++.+|++||++.||++.|+.
T Consensus 223 -~~~~~~~~-----~~~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 223 -AYGVAMNK-----LALPIPST---CPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp -HHHHHTSC-----CCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred -HHhhhcCC-----CCCCCCcc---cCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 11111111 11111111 12345566779999999999999999999974
No 225
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.36 E-value=3.4e-13 Score=143.14 Aligned_cols=129 Identities=19% Similarity=0.201 Sum_probs=88.0
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCCch
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKSLD 721 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~~ 721 (866)
.|++...+...++.|||.+..+...... ......+|.+|+|||......++.++||||||++++||+| |+.|+.....
T Consensus 142 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~ 220 (281)
T 3cc6_A 142 RNILVASPECVKLGDFGLSRYIEDEDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 220 (281)
T ss_dssp GGEEEEETTEEEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG
T ss_pred ceEEECCCCcEEeCccCCCccccccccc-ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh
Confidence 4666666667789999999887654321 1233457889999999998999999999999999999999 9999875433
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
.+ ....+. .+.. +....... ..+.++...|++.+|++||++.||++.|+..
T Consensus 221 ~~---~~~~~~----~~~~-----~~~~~~~~---~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 221 KD---VIGVLE----KGDR-----LPKPDLCP---PVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp GG---HHHHHH----HTCC-----CCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HH---HHHHHh----cCCC-----CCCCCCCC---HHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 22 222211 1111 01111111 2355566799999999999999999999854
No 226
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.36 E-value=1.8e-13 Score=144.18 Aligned_cols=130 Identities=22% Similarity=0.258 Sum_probs=91.1
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~ 720 (866)
..|++...+...++.|||.++.+..+.. ....+..+|..|+|||.+....++.++||||||++++||+| |+.|+....
T Consensus 134 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~ 212 (269)
T 4hcu_A 134 ARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 212 (269)
T ss_dssp GGGEEECGGGCEEECCTTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred hheEEEcCCCCEEecccccccccccccc-ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC
Confidence 3477776777788999999987764322 11223456788999999999999999999999999999999 999987543
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
..+ ....+ ..+ ..+....... ..+.++...|++.+|++||++.|+++.|+..
T Consensus 213 ~~~---~~~~~----~~~-----~~~~~~~~~~---~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l 264 (269)
T 4hcu_A 213 NSE---VVEDI----STG-----FRLYKPRLAS---THVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264 (269)
T ss_dssp HHH---HHHHH----HTT-----CCCCCCTTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHH---HHHHH----hcC-----ccCCCCCcCC---HHHHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence 322 11111 111 0111111112 2355566799999999999999999999854
No 227
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.35 E-value=9.9e-14 Score=150.83 Aligned_cols=141 Identities=23% Similarity=0.157 Sum_probs=92.6
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeE-EEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPV-YKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~v-y~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++...+...++.|||.+..++....... .....||..|+|||.+....++.++||||||++++||+||+.|+....
T Consensus 155 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~ 234 (327)
T 3lxl_A 155 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 234 (327)
T ss_dssp GGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH
T ss_pred hhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcccc
Confidence 3467776777788999999998865443221 123357888999999999999999999999999999999999976422
Q ss_pred hhh--------hhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 721 DME--------KIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 721 ~~~--------~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
... .......+......+.. +.. +......+.+++..|++.||++||+|.||++.|+.....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 235 AEFLRMMGCERDVPALSRLLELLEEGQR-----LPA---PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp HHHHHHCC----CCHHHHHHHHHHTTCC-----CCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred chhhhhcccccccccHHHHHHHhhcccC-----CCC---CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 110 00001111111111110 111 111223455667799999999999999999999976543
No 228
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.35 E-value=8.8e-13 Score=142.63 Aligned_cols=133 Identities=17% Similarity=0.260 Sum_probs=83.1
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCc---eeEEEeecCCCCccCceeeec---------CCCCchhHHHHHHHHHHHHH
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGY---GPVYKVTANSYGYLAPEYAMR---------GHLTEKADVFSFGVVALEII 710 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~---g~vy~~~~gt~gY~aPE~~~~---------~~~t~ksDVySfGvvLlEl~ 710 (866)
.|++.. +...++.|||.+..++.... ........||.+|+|||.+.. ..++.++||||||++++||+
T Consensus 159 ~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~ 237 (319)
T 2y4i_B 159 KNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH 237 (319)
T ss_dssp TTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHH
T ss_pred hhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHH
Confidence 356554 45678899998877653221 111223458999999998864 45899999999999999999
Q ss_pred hcCCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCccc--ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 711 SGRASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLT--EFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 711 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~--~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
||+.|+....... .. +. ...+ ..+.+. ..+ ..+.+++..|++.+|++||++.+|+++|+...
T Consensus 238 ~g~~p~~~~~~~~---~~---~~-~~~~-----~~~~~~~~~~~----~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 238 AREWPFKTQPAEA---II---WQ-MGTG-----MKPNLSQIGMG----KEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp HSSCSSSSCCHHH---HH---HH-HHTT-----CCCCCCCSSCC----TTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred hCCCCCCCCCHHH---HH---HH-hccC-----CCCCCCcCCCC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 9999997543321 11 11 1111 112111 111 23456667999999999999999999999765
Q ss_pred CCCC
Q 038019 789 EVGT 792 (866)
Q Consensus 789 ~~~~ 792 (866)
....
T Consensus 302 ~~~~ 305 (319)
T 2y4i_B 302 KRNR 305 (319)
T ss_dssp ----
T ss_pred Hhhc
Confidence 5433
No 229
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.35 E-value=1.3e-14 Score=157.16 Aligned_cols=137 Identities=21% Similarity=0.200 Sum_probs=91.8
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCce-eEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYG-PVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g-~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
.|++...+...++.|||.+..+..+... .......||..|+|||.+....++.++||||||++++||+||+.|+.....
T Consensus 163 ~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~ 242 (318)
T 3lxp_A 163 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT 242 (318)
T ss_dssp GGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH
T ss_pred heEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccch
Confidence 3666666667789999999988765422 223344688899999999999999999999999999999999999864221
Q ss_pred hhhhcH---------HHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 722 MEKIYL---------LEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 722 ~~~~~l---------~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
. .... ..........+.. +.. +......+.+++..|++.+|++||++.||++.|+...
T Consensus 243 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 243 K-FLELIGIAQGQMTVLRLTELLERGER-----LPR---PDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp H-HHHHHCSCCHHHHHHHHHHHHHTTCC-----CCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred h-hhhhhcccccchhHHHHHHHHhcccC-----CCC---CccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 1 0000 0111111111111 111 1112234566777999999999999999999998643
No 230
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.35 E-value=2.2e-13 Score=148.49 Aligned_cols=124 Identities=20% Similarity=0.228 Sum_probs=87.9
Q ss_pred cCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCC-CchhHHHHHHHHHHHHHhcCCCC
Q 038019 638 GIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHL-TEKADVFSFGVVALEIISGRASS 716 (866)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~-t~ksDVySfGvvLlEl~tg~~p~ 716 (866)
......|++...+...++.|||.++.+..+.+ .....||+.|+|||.+.+..+ +.++|||||||+++||+||+.|+
T Consensus 132 ~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf 208 (336)
T 3h4j_B 132 RDLKPENLLLDDNLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF 208 (336)
T ss_dssp CCCSTTTEEECTTCCEEECCSSCTBTTTTSBT---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred cCCchhhEEEcCCCCEEEEEeccceeccCCcc---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCC
Confidence 33334477777777788999999998876543 234579999999999987765 78999999999999999999999
Q ss_pred CCCchhhhhcHHHHHHHHhhcCCcccccC--CcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 717 DKSLDMEKIYLLEWAWNLHENNQSFGLVD--PTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 717 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
+....... ...+.. ..+...... .+.++...|++.||.+|||+.|+++
T Consensus 209 ~~~~~~~~---------------~~~i~~~~~~~p~~~s~---~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 209 DDEFIPNL---------------FKKVNSCVYVMPDFLSP---GAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp BCSSSTTC---------------BCCCCSSCCCCCTTSCH---HHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred CCccHHHH---------------HHHHHcCCCCCcccCCH---HHHHHHHHHcCCChhHCcCHHHHHh
Confidence 75332110 001111 111122222 3445666999999999999999975
No 231
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.35 E-value=5.7e-13 Score=141.82 Aligned_cols=131 Identities=19% Similarity=0.170 Sum_probs=94.6
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~ 720 (866)
..|++...+...++.|||.+..++.... ....+..+|+.|+|||......++.++||||||++++||+| |+.|+....
T Consensus 139 p~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~ 217 (288)
T 3kfa_A 139 ARNCLVGENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217 (288)
T ss_dssp GGGEEECGGGCEEECCCCGGGTSCSSSS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cceEEEcCCCCEEEccCccceeccCCcc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 3467776777788999999998875543 44455667889999999999999999999999999999999 999987543
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
... +.+.+.. + ..+...... ...+.++...|++.+|++||++.||+++|+...
T Consensus 218 ~~~---~~~~~~~----~-----~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 218 LSQ---VYELLEK----D-----YRMERPEGC---PEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp GGG---HHHHHHT----T-----CCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHH---HHHHHhc----c-----CCCCCCCCC---CHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 322 2222211 1 111111111 234556667999999999999999999998543
No 232
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.35 E-value=1.7e-13 Score=145.16 Aligned_cols=131 Identities=22% Similarity=0.299 Sum_probs=92.3
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCCch
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKSLD 721 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~~ 721 (866)
.|++..++...++.|||.+..+....+ ....+..+|..|+|||....+.++.++||||||++++||+| |+.|+.....
T Consensus 138 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 216 (279)
T 1qpc_A 138 ANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 216 (279)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSCE-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH
T ss_pred hhEEEcCCCCEEECCCcccccccCccc-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH
Confidence 466666666778999999988875442 12223457789999999998999999999999999999999 8999875433
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
.+ +... ...+. .+...... ...+.+++..|++.+|++||++.+++++|+....
T Consensus 217 ~~---~~~~----~~~~~-----~~~~~~~~---~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 217 PE---VIQN----LERGY-----RMVRPDNC---PEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp HH---HHHH----HHTTC-----CCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH---HHHH----Hhccc-----CCCCcccc---cHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 22 2211 11111 11111111 2345566679999999999999999999986543
No 233
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.34 E-value=3.4e-13 Score=145.46 Aligned_cols=136 Identities=15% Similarity=0.163 Sum_probs=87.8
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++...+...++.|||.++.++... ..+....||..|+|||.+.+ ..++.++|||||||+++||+||+.|+....
T Consensus 147 p~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 224 (311)
T 3niz_A 147 PQNLLINSDGALKLADFGLARAFGIPV--RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224 (311)
T ss_dssp GGGEEECTTCCEEECCCTTCEETTSCC--C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred hHhEEECCCCCEEEccCcCceecCCCc--ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCC
Confidence 346766666678899999998876442 23445578999999999875 568999999999999999999999997654
Q ss_pred hhhhhcHHHHHHHHhhcCC---c-------------ccccCCcc-cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENNQ---S-------------FGLVDPTL-TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~---~-------------~~~~d~~l-~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+. ...+........ . .+..+... .........++.++...|++.||++|||+.|+++
T Consensus 225 ~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 225 DDDQ---LPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp TTTH---HHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hHHH---HHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 3322 222222111100 0 00011100 0000111234566777999999999999999975
No 234
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.34 E-value=2.9e-13 Score=146.90 Aligned_cols=128 Identities=16% Similarity=0.240 Sum_probs=89.1
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCC-CchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHL-TEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~-t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
.|++...+...++.|||.+..+.............||..|+|||++....+ +.++|||||||+++||+||+.|+.....
T Consensus 134 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 213 (323)
T 3tki_A 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213 (323)
T ss_dssp GGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT
T ss_pred HHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch
Confidence 366666666788999999988766555444556689999999999987765 7899999999999999999999975432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAM 783 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~ 783 (866)
.. .....|... . ...++ ..... ..+.++...|++.||++|||+.|+++.
T Consensus 214 ~~-~~~~~~~~~----~---~~~~~-~~~~~----~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 214 SC-QEYSDWKEK----K---TYLNP-WKKID----SAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TS-HHHHHHHTT----C---TTSTT-GGGSC----HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HH-HHHHHHhcc----c---ccCCc-cccCC----HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 21 122222111 0 00111 11112 234456679999999999999998753
No 235
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.34 E-value=2.9e-13 Score=147.53 Aligned_cols=132 Identities=12% Similarity=0.057 Sum_probs=75.2
Q ss_pred CCCCcccCHHHHHHHhcCCccccccCCCCceeE----------EEeecCCCCccCceee---ecCCCCchhHHHHHHHHH
Q 038019 640 GSKPNIFGYAELRSATKDFNRSNKLGEGGYGPV----------YKVTANSYGYLAPEYA---MRGHLTEKADVFSFGVVA 706 (866)
Q Consensus 640 ~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~v----------y~~~~gt~gY~aPE~~---~~~~~t~ksDVySfGvvL 706 (866)
....|++...+...++.|||.+..++....... .....||..|+|||.+ ....++.++|||||||++
T Consensus 164 ikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il 243 (337)
T 3ll6_A 164 LKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243 (337)
T ss_dssp CCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHH
T ss_pred CCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHH
Confidence 333477777777788999999998875432111 1133589999999998 567889999999999999
Q ss_pred HHHHhcCCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 038019 707 LEIISGRASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAG 786 (866)
Q Consensus 707 lEl~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~ 786 (866)
+||+||+.|+....... .. .. . .......... ..+.+++..|++.+|++||++.||++.|+.
T Consensus 244 ~el~~g~~p~~~~~~~~---~~---~~-----~----~~~~~~~~~~---~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 305 (337)
T 3ll6_A 244 YLLCFRQHPFEDGAKLR---IV---NG-----K----YSIPPHDTQY---TVFHSLIRAMLQVNPEERLSIAEVVHQLQE 305 (337)
T ss_dssp HHHHHSSCCC---------------------------CCCCTTCCSS---GGGHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHhCCCCCcchhHHH---hh---cC-----c----ccCCcccccc---hHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 99999999986422110 00 00 0 0000001111 124456679999999999999999999986
Q ss_pred CcC
Q 038019 787 DIE 789 (866)
Q Consensus 787 ~~~ 789 (866)
...
T Consensus 306 ~~~ 308 (337)
T 3ll6_A 306 IAA 308 (337)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 236
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.33 E-value=2.4e-13 Score=144.38 Aligned_cols=130 Identities=18% Similarity=0.231 Sum_probs=90.7
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~ 720 (866)
..|++...+...++.|||.+..+..... ....+..+|++|+|||......++.++||||||++++||+| |+.|+....
T Consensus 148 p~Nili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~ 226 (283)
T 3gen_A 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 226 (283)
T ss_dssp GGGEEECTTSCEEECSTTGGGGBCCHHH-HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEEcCCCCEEEcccccccccccccc-ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC
Confidence 3466666666788999999987754322 11223456788999999999999999999999999999999 999987544
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
..+ .... ...+ ..+....... ..+.++...|++.+|++||++.|+++.|+..
T Consensus 227 ~~~---~~~~----~~~~-----~~~~~~~~~~---~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~ 278 (283)
T 3gen_A 227 NSE---TAEH----IAQG-----LRLYRPHLAS---EKVYTIMYSCWHEKADERPTFKILLSNILDV 278 (283)
T ss_dssp HHH---HHHH----HHTT-----CCCCCCTTCC---HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhH---HHHH----Hhcc-----cCCCCCCcCC---HHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 322 1111 1111 1111111112 2455667799999999999999999999854
No 237
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.33 E-value=5.4e-13 Score=142.39 Aligned_cols=132 Identities=20% Similarity=0.169 Sum_probs=91.4
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCc-eeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCC
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGY-GPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKS 719 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~-g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~ 719 (866)
..|++...+...++.|||.+..+..... ........+|..|+|||.+....++.++||||||++++||+| |+.|+...
T Consensus 145 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 224 (291)
T 1xbb_A 145 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 224 (291)
T ss_dssp GGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred cceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence 3467766666778999999988765432 111222356789999999998899999999999999999999 99998764
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
...+ +... ...+.. +.... .....+.+++..|++.||++||++.+|++.|+...
T Consensus 225 ~~~~---~~~~----~~~~~~-----~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 225 KGSE---VTAM----LEKGER-----MGCPA---GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp CHHH---HHHH----HHTTCC-----CCCCT---TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CHHH---HHHH----HHcCCC-----CCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 4322 2221 222211 11111 11234556677999999999999999999998644
No 238
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.33 E-value=1.3e-13 Score=153.71 Aligned_cols=82 Identities=24% Similarity=0.247 Sum_probs=61.5
Q ss_pred CCCCcccCHHHHHHHhcCCccccccCCCC-------------------ceeEEEeecCCCCccCceeeec-CCCCchhHH
Q 038019 640 GSKPNIFGYAELRSATKDFNRSNKLGEGG-------------------YGPVYKVTANSYGYLAPEYAMR-GHLTEKADV 699 (866)
Q Consensus 640 ~~~~~~~~~~~~~~~~~dF~~~~~lg~g~-------------------~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDV 699 (866)
....|++...+...++.|||.++.+.... .........||..|+|||.+.+ ..++.++||
T Consensus 135 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di 214 (388)
T 3oz6_A 135 MKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDM 214 (388)
T ss_dssp CCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHH
T ss_pred CCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhH
Confidence 33347777777778899999998775311 1223344579999999999876 679999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCch
Q 038019 700 FSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 700 ySfGvvLlEl~tg~~p~~~~~~ 721 (866)
|||||+++||+||+.||.....
T Consensus 215 wSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 215 WSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSH
T ss_pred HHHHHHHHHHHhCCCCCCCCCH
Confidence 9999999999999999976543
No 239
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.33 E-value=2.8e-13 Score=147.10 Aligned_cols=133 Identities=15% Similarity=0.071 Sum_probs=67.8
Q ss_pred CcccCHHHH---HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 643 PNIFGYAEL---RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 643 ~~~~~~~~~---~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
.|++...+- ..++.|||.++....+. .......||.+|+|||.+....++.++|||||||+++||+||+.|+...
T Consensus 135 ~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 212 (325)
T 3kn6_A 135 ENLLFTDENDNLEIKIIDFGFARLKPPDN--QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH 212 (325)
T ss_dssp GGEEEEC----CEEEECCCTTCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred HHEEEecCCCcccEEEeccccceecCCCC--CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 366554332 56889999998776543 2334556899999999999999999999999999999999999999754
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.......-...+...+..+... .++. ........+.++...|++.||++||++.||++
T Consensus 213 ~~~~~~~~~~~~~~~i~~~~~~--~~~~---~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 213 DRSLTCTSAVEIMKKIKKGDFS--FEGE---AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp -----CCCHHHHHHHHTTTCCC--CCSH---HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred ccccccccHHHHHHHHHcCCCC--CCcc---cccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 3211111111222222222110 0000 00111234556677999999999999998863
No 240
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.33 E-value=2.4e-13 Score=150.67 Aligned_cols=133 Identities=11% Similarity=-0.063 Sum_probs=87.4
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec--CCCCchhHHHHHHHHHHHHHhcCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR--GHLTEKADVFSFGVVALEIISGRA 714 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~--~~~t~ksDVySfGvvLlEl~tg~~ 714 (866)
|......|++...+...++.|||.++.++.. .....+|++|+|||++.. ..++.++|||||||+++||+||+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 3333334777777778899999999987632 114467799999999987 789999999999999999999999
Q ss_pred CCCCCchhhhhcHHHHHHHHhhcCCcccccCCccc-ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 715 SSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLT-EFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 715 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
|+......... .+.............. .........+.++...|++.||++|||+.|+++
T Consensus 292 Pf~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKG--------SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTT--------CCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCcCccccc--------chhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99754322110 0000000000111110 000111234555666999999999999999863
No 241
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.33 E-value=4.5e-13 Score=142.68 Aligned_cols=134 Identities=18% Similarity=0.182 Sum_probs=93.4
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCce-eEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCC
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYG-PVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKS 719 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g-~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~ 719 (866)
..|++...+...++.|||.+..++..... .......||++|+|||.+....++.++||||||++++||+| |+.|+...
T Consensus 138 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 217 (287)
T 1u59_A 138 ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217 (287)
T ss_dssp GGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred hheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 34677666667789999999888654321 11122356889999999998899999999999999999999 99998754
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
...+ +...+ ..+.. +.... .....+.+++..|++.+|++||++.+|++.|+.....
T Consensus 218 ~~~~---~~~~i----~~~~~-----~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 218 KGPE---VMAFI----EQGKR-----MECPP---ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp CTHH---HHHHH----HTTCC-----CCCCT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHH---HHHHH----hcCCc-----CCCCC---CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 4322 22222 11211 11111 1123455666799999999999999999999865443
No 242
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.33 E-value=5.9e-13 Score=151.76 Aligned_cols=143 Identities=17% Similarity=0.100 Sum_probs=87.2
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASS 716 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~ 716 (866)
|+.....|++...+...++.|||.++.++.+.. .....||.+|+|||.+.+..++.++||||+||+++||++|+.||
T Consensus 187 HrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF 263 (464)
T 3ttj_A 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263 (464)
T ss_dssp CCCCCGGGEEECTTSCEEECCCCCC-----CCC---C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred cCCCChHhEEEeCCCCEEEEEEEeeeecCCCcc---cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCC
Confidence 333333477777777889999999998876543 33457899999999999999999999999999999999999999
Q ss_pred CCCchhhhhcHHHH----------------HHHHhhcC-Ccc-----cccCCcc-c---ccCHHHHHHHHHHHHHccCCC
Q 038019 717 DKSLDMEKIYLLEW----------------AWNLHENN-QSF-----GLVDPTL-T---EFNDKEALRVIGVALLCTQTS 770 (866)
Q Consensus 717 ~~~~~~~~~~l~~~----------------~~~~~~~~-~~~-----~~~d~~l-~---~~~~~~~~~~~~la~~C~~~~ 770 (866)
......+....+.. +....... ... +.+...+ . +........+.++..+|++.|
T Consensus 264 ~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~d 343 (464)
T 3ttj_A 264 PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 343 (464)
T ss_dssp CCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSS
T ss_pred CCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCC
Confidence 76443221111100 00000000 000 0000000 0 001112345677888999999
Q ss_pred CCCCCCHHHHHH
Q 038019 771 PMMRPPMSRVVA 782 (866)
Q Consensus 771 p~~RPsm~~V~~ 782 (866)
|++|||+.|+++
T Consensus 344 P~~R~ta~e~L~ 355 (464)
T 3ttj_A 344 PAKRISVDDALQ 355 (464)
T ss_dssp TTTSCCHHHHHT
T ss_pred hhhCCCHHHHhc
Confidence 999999999976
No 243
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.33 E-value=4.8e-13 Score=146.33 Aligned_cols=124 Identities=19% Similarity=0.172 Sum_probs=78.7
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCC-CchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHL-TEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~-t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++..++...++.|||.+.....+.. .......||+.|+|||.+.+..+ +.++||||+||+++||+||+.|++...
T Consensus 136 p~NIll~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 214 (347)
T 3zgw_A 136 PENLLFDEYHKLKLIDFGLCAKPKGNKD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN 214 (347)
T ss_dssp GGGEEECTTSCEEECCCTTCBC---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEEcCCCCEEEEeccCcccccCCCC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 3467776667788999999887654321 22345579999999999987765 899999999999999999999997543
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+ +...+ ..+.. .+...... .+.++...|++.||++|||+.|+++
T Consensus 215 ~~~---~~~~i----~~~~~------~~p~~~s~---~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 215 VMA---LYKKI----MRGKY------DVPKWLSP---SSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp HHH---HHHHH----HHTCC------CCCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHH---HHHHH----HcCCC------CCCCCCCH---HHHHHHHHHcccCHhHCcCHHHHhc
Confidence 221 22111 11111 11111122 2345666999999999999999985
No 244
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.32 E-value=4.7e-13 Score=145.45 Aligned_cols=123 Identities=20% Similarity=0.248 Sum_probs=87.2
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCC-chhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLT-EKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t-~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
...|++...+...++.|||.++.+..++.. ....||++|+|||.+.+..++ .++|||||||+++||+||+.|++..
T Consensus 141 kp~NIll~~~~~~kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 217 (328)
T 3fe3_A 141 KAENLLLDADMNIKIADFGFSNEFTVGGKL---DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217 (328)
T ss_dssp CGGGEEECTTSCEEECSTTCCGGGSSSCGG---GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CHHHEEEcCCCCEEEeeccCceecCCCCcc---ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC
Confidence 334777777777889999999887765432 234689999999999887765 8999999999999999999999764
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
...+ +.+.+ ..+.. .++..... .+.++...|++.||++|||+.|+++
T Consensus 218 ~~~~---~~~~i----~~~~~------~~p~~~s~---~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 218 NLKE---LRERV----LRGKY------RIPFYMST---DCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp SHHH---HHHHH----HHCCC------CCCTTSCH---HHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CHHH---HHHHH----HhCCC------CCCCCCCH---HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 3221 11111 11111 11111222 3445666999999999999999875
No 245
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.32 E-value=2.2e-13 Score=148.14 Aligned_cols=123 Identities=21% Similarity=0.249 Sum_probs=83.7
Q ss_pred HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCCchhhhhcHHHH
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKSLDMEKIYLLEW 730 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~~~~~~~l~~~ 730 (866)
..++.|||.+..+.............||.+|+|||.+..+.++.++||||||++++||+| |+.|+...... .+.++
T Consensus 181 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~ 257 (327)
T 2yfx_A 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ---EVLEF 257 (327)
T ss_dssp CEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHH
T ss_pred eEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH---HHHHH
Confidence 467889998877655443222223467899999999999999999999999999999999 99998754322 12222
Q ss_pred HHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 731 AWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 731 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
+. .+.. +...... ...+.+++..|++.+|++||++.+|++.|+....
T Consensus 258 ~~----~~~~-----~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 258 VT----SGGR-----MDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp HH----TTCC-----CCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred Hh----cCCC-----CCCCCCC---CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 21 1111 1111111 2245566779999999999999999999986543
No 246
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.32 E-value=2.2e-13 Score=151.25 Aligned_cols=120 Identities=13% Similarity=0.019 Sum_probs=84.0
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecC-----------CCCchhHHHHHHHH
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRG-----------HLTEKADVFSFGVV 705 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~-----------~~t~ksDVySfGvv 705 (866)
+......|++...+...++.|||.++..+. ......| .+|+|||++... .++.++|||||||+
T Consensus 229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred cCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 333333477777777889999999987543 3445567 999999999887 89999999999999
Q ss_pred HHHHHhcCCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 706 ALEIISGRASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 706 LlEl~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
++||+||+.|+........ ...+. +.....+ ..+.+++..|++.||++||++.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~~---------------~~~~~-~~~~~~~----~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGG---------------SEWIF-RSCKNIP----QPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CC---------------SGGGG-SSCCCCC----HHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccc---------------hhhhh-hhccCCC----HHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999999864322110 00111 1111122 23555667999999999999999975
No 247
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.32 E-value=4.1e-13 Score=144.70 Aligned_cols=134 Identities=16% Similarity=0.122 Sum_probs=79.9
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchh
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDM 722 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~ 722 (866)
.|++...+...++.|||.+........ ..+....||..|+|||.+....++.++||||||++++||+||+.|+......
T Consensus 163 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 241 (309)
T 2h34_A 163 ENILVSADDFAYLVDFGIASATTDEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS 241 (309)
T ss_dssp GGEEECTTSCEEECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH
T ss_pred HHEEEcCCCCEEEecCccCcccccccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH
Confidence 366666666778999999887765432 2233456899999999999999999999999999999999999999753221
Q ss_pred hhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhcCcCC
Q 038019 723 EKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRP-PMSRVVAMLAGDIEV 790 (866)
Q Consensus 723 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RP-sm~~V~~~L~~~~~~ 790 (866)
.......... ..+. .........+.++...|++.+|++|| ++.++++.|+.....
T Consensus 242 -------~~~~~~~~~~----~~~~--~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 242 -------VMGAHINQAI----PRPS--TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp -------HHHHHHHSCC----CCGG--GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred -------HHHHHhccCC----CCcc--ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 1111111110 0010 01111112345566699999999999 999999999976544
No 248
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.32 E-value=5.9e-13 Score=148.67 Aligned_cols=126 Identities=13% Similarity=0.094 Sum_probs=84.4
Q ss_pred HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhh---hcHH
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEK---IYLL 728 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~---~~l~ 728 (866)
..++.|||.+..++... ....||..|+|||.+.+..++.++|||||||+++||+||+.|+......+. ....
T Consensus 234 ~~kl~DfG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~ 308 (397)
T 1wak_A 234 KVKIADLGNACWVHKHF-----TEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHI 308 (397)
T ss_dssp CEEECCGGGCEETTBCS-----CSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHH
T ss_pred ceEeccccccccccccC-----ccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHH
Confidence 46788999988776432 234689999999999999999999999999999999999999975442211 1111
Q ss_pred HHHHHHhh--------cC-----------CcccccCCcc----------cccCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 038019 729 EWAWNLHE--------NN-----------QSFGLVDPTL----------TEFNDKEALRVIGVALLCTQTSPMMRPPMSR 779 (866)
Q Consensus 729 ~~~~~~~~--------~~-----------~~~~~~d~~l----------~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~ 779 (866)
........ .+ ....+.+... .....+....+.++..+|++.||++|||+.|
T Consensus 309 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 388 (397)
T 1wak_A 309 ALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE 388 (397)
T ss_dssp HHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHH
T ss_pred HHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHH
Confidence 11111100 00 0000000000 0123455667788899999999999999999
Q ss_pred HHH
Q 038019 780 VVA 782 (866)
Q Consensus 780 V~~ 782 (866)
|++
T Consensus 389 ~l~ 391 (397)
T 1wak_A 389 CLR 391 (397)
T ss_dssp HHT
T ss_pred Hhh
Confidence 975
No 249
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.32 E-value=1.3e-12 Score=141.45 Aligned_cols=137 Identities=10% Similarity=0.045 Sum_probs=91.0
Q ss_pred HHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeee--------cCCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 648 YAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAM--------RGHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 648 ~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~--------~~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
..+...++.|||.++.+..+.. +....||.+|+|||.+. ...++.++|||||||+++||+||+.|+...
T Consensus 150 ~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 226 (319)
T 4euu_A 150 DGQSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (319)
T ss_dssp TSCEEEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECT
T ss_pred CCCceEEEccCCCceecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4444567899999988866532 23456899999999876 578999999999999999999999998754
Q ss_pred chhh-hhcHHHHHHHHhhcCCcccc---cC------Ccc---cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 038019 720 LDME-KIYLLEWAWNLHENNQSFGL---VD------PTL---TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAG 786 (866)
Q Consensus 720 ~~~~-~~~l~~~~~~~~~~~~~~~~---~d------~~l---~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~ 786 (866)
.... .......+...........+ .+ +.+ ..........+..+...|++.||++|||+.|+++....
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 227 EGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp TCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred CccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 3222 11222222221111111110 00 111 12334445556678889999999999999999998874
Q ss_pred C
Q 038019 787 D 787 (866)
Q Consensus 787 ~ 787 (866)
.
T Consensus 307 ~ 307 (319)
T 4euu_A 307 I 307 (319)
T ss_dssp H
T ss_pred H
Confidence 3
No 250
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.32 E-value=8.6e-13 Score=145.76 Aligned_cols=118 Identities=11% Similarity=0.044 Sum_probs=87.0
Q ss_pred HHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHH
Q 038019 650 ELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLE 729 (866)
Q Consensus 650 ~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~ 729 (866)
+...++.|||.++.+....-+..+....||.+|||||++.+..++.++|||||||+++||+||+.|+.......
T Consensus 219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------ 292 (365)
T 3e7e_A 219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE------ 292 (365)
T ss_dssp CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE------
T ss_pred cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc------
Confidence 56788999999987765555567777889999999999999999999999999999999999999985322111
Q ss_pred HHHHHhhcCCcccccCCcccc-cCHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHhcCc
Q 038019 730 WAWNLHENNQSFGLVDPTLTE-FNDKEALRVIGVALLCTQTSPMMR-PPMSRVVAMLAGDI 788 (866)
Q Consensus 730 ~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~~~la~~C~~~~p~~R-Psm~~V~~~L~~~~ 788 (866)
..++..+.. ...+...+++ ..|++.+|.+| |+++++.+.|+...
T Consensus 293 ------------~~~~~~~~~~~~~~~~~~~~---~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 293 ------------CKPEGLFRRLPHLDMWNEFF---HVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp ------------EEECSCCTTCSSHHHHHHHH---HHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred ------------eeechhccccCcHHHHHHHH---HHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 001111111 1234444444 47889999888 67888888887544
No 251
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.31 E-value=5.4e-13 Score=144.79 Aligned_cols=137 Identities=13% Similarity=0.132 Sum_probs=83.1
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
...|++...+...++.|||.+...+... ..+....||.+|+|||.+.+ ..++.++|||||||+++||+||+.|+...
T Consensus 127 kp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (324)
T 3mtl_A 127 KPQNLLINERGELKLADFGLARAKSIPT--KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS 204 (324)
T ss_dssp CGGGEEECTTCCEEECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CHHHEEECCCCCEEEccCcccccccCCc--cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 3346666666677899999988765432 33445578999999998876 57899999999999999999999999865
Q ss_pred chhhhhcHHHHHHHHhhc---CCcccccC---------Cccc-----ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 720 LDMEKIYLLEWAWNLHEN---NQSFGLVD---------PTLT-----EFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~---~~~~~~~d---------~~l~-----~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
...+ ....+...... ....+..+ +... .........+.++...|++.||++|||+.||++
T Consensus 205 ~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 205 TVEE---QLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp SHHH---HHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CHHH---HHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 4333 22222222111 00101000 0000 000011134556777999999999999999975
No 252
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.31 E-value=4.4e-13 Score=144.57 Aligned_cols=132 Identities=20% Similarity=0.270 Sum_probs=79.6
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCce-eEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYG-PVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g-~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++...+...++.|||.+..++..+.. .......||.+|+|||.+.+..++.++|||||||+++||+||+.|+....
T Consensus 144 p~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 223 (311)
T 3ork_A 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223 (311)
T ss_dssp GGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred HHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 34677666667889999999888754432 12234568999999999999999999999999999999999999997644
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHH-HHHh
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVV-AMLA 785 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~-~~L~ 785 (866)
..+ .......... ..+.. ........+.++...|++.||++||++.+++ ..+.
T Consensus 224 ~~~------~~~~~~~~~~----~~~~~--~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 277 (311)
T 3ork_A 224 PVS------VAYQHVREDP----IPPSA--RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277 (311)
T ss_dssp HHH------HHHHHHHCCC----CCHHH--HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred hHH------HHHHHhcCCC----CCccc--ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence 322 1122222111 00000 0001122355666799999999999766654 4444
No 253
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.31 E-value=1.2e-12 Score=140.28 Aligned_cols=125 Identities=14% Similarity=0.149 Sum_probs=85.8
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCC---CCchhHHHHHHHHHHHHHhcCCCCCC
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGH---LTEKADVFSFGVVALEIISGRASSDK 718 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~---~t~ksDVySfGvvLlEl~tg~~p~~~ 718 (866)
..|++...+...++.|||.++.+.... .......||..|+|||.+.... .+.++|||||||+++||++|+.|+..
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred HHHEEECCCCCEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 346776666678899999998876542 2344567999999999987655 47899999999999999999999875
Q ss_pred CchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 719 SLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 719 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.... .+.... ..+.. . .|.....+ ..+.++..+|++.||++||++.||++
T Consensus 243 ~~~~------~~~~~~-~~~~~-~--~~~~~~~~----~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 243 ERIM------CLHSKI-KSQAL-E--FPDQPDIA----EDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SSHH------HHHHHH-HHCCC-C--CCSSSCCC----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccHH------HHHHHH-hcccC-C--CCCccccC----HHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 3321 111111 11111 0 01111122 23455667999999999999999864
No 254
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.31 E-value=1.7e-13 Score=151.08 Aligned_cols=67 Identities=21% Similarity=0.199 Sum_probs=56.0
Q ss_pred HHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 650 ELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 650 ~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
+...++.|||.+...+... ....||..|+|||.+.+..++.++|||||||+++||+||+.|+.....
T Consensus 198 ~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 264 (360)
T 3llt_A 198 STGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEH 264 (360)
T ss_dssp CCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred CCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcH
Confidence 4456789999998765432 234689999999999999999999999999999999999999986543
No 255
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.31 E-value=5.8e-13 Score=141.90 Aligned_cols=136 Identities=17% Similarity=0.191 Sum_probs=84.2
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++...+...++.|||.++.++... ..+....||..|+|||.+.+ ..++.++|||||||+++||+||+.|+....
T Consensus 128 p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 205 (288)
T 1ob3_A 128 PQNLLINREGELKIADFGLARAFGIPV--RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205 (288)
T ss_dssp GGGEEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred HHHEEEcCCCCEEEeECccccccCccc--cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 346776667778899999998776432 23345578999999999875 468999999999999999999999997644
Q ss_pred hhhhhcHHHHHHHHhhcC---Cc-----ccccCCccc--------ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENN---QS-----FGLVDPTLT--------EFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~---~~-----~~~~d~~l~--------~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+. ...+....... .. ....++... .........+.++...|++.||++|||+.|+++
T Consensus 206 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 206 EADQ---LMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp HHHH---HHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHH---HHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 3221 11122211100 00 001111110 000111234456777999999999999999874
No 256
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.31 E-value=4.5e-13 Score=142.80 Aligned_cols=132 Identities=16% Similarity=0.224 Sum_probs=90.2
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCcee-EEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCC
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGP-VYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKS 719 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~-vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~ 719 (866)
..|++...+...++.|||.++.+....... ......+|.+|+|||......++.++||||||++++||+| |+.|+...
T Consensus 149 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 228 (291)
T 1u46_A 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 228 (291)
T ss_dssp GGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred hheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC
Confidence 346776666678899999998886544322 2234467889999999998889999999999999999999 99998754
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
...+ +. ......+.. .+..... ...+.+++..|++.+|++||++.+|++.|+..
T Consensus 229 ~~~~---~~---~~~~~~~~~----~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 282 (291)
T 1u46_A 229 NGSQ---IL---HKIDKEGER----LPRPEDC----PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 282 (291)
T ss_dssp CHHH---HH---HHHHTSCCC----CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CHHH---HH---HHHHccCCC----CCCCcCc----CHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence 3321 12 111111110 0111112 23455667799999999999999999999854
No 257
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.31 E-value=1.1e-12 Score=145.92 Aligned_cols=74 Identities=22% Similarity=0.209 Sum_probs=60.1
Q ss_pred CcccC--HHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 643 PNIFG--YAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 643 ~~~~~--~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
.|++. ..+...++.|||.+..++... ....||..|+|||++.+..++.++|||||||+++||+||+.|+....
T Consensus 188 ~NIll~~~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 188 ENILLCNPKRSAIKIVDFGSSCQLGQRI-----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp GGEEESSTTSCCEEECCCTTCEETTCCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccEEEecCCCCcEEEEeccCceeccccc-----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 35555 234456899999998886542 23468999999999999999999999999999999999999998654
Q ss_pred h
Q 038019 721 D 721 (866)
Q Consensus 721 ~ 721 (866)
.
T Consensus 263 ~ 263 (382)
T 2vx3_A 263 E 263 (382)
T ss_dssp H
T ss_pred H
Confidence 3
No 258
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.31 E-value=1.4e-12 Score=140.56 Aligned_cols=132 Identities=15% Similarity=0.151 Sum_probs=79.7
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchh
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDM 722 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~ 722 (866)
.|++...+...++.|||.+..+.... .......||..|+|||.+....++.++||||||++++||+||+.|+.....
T Consensus 165 ~NIl~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~- 241 (310)
T 2wqm_A 165 ANVFITATGVVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM- 241 (310)
T ss_dssp GGEEECTTSCEEECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-
T ss_pred HHEEEcCCCCEEEEeccceeeecCCC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-
Confidence 36666666677889999988776432 222345689999999999999999999999999999999999999864321
Q ss_pred hhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 723 EKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 723 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
....+... ...+... +.......+ .+.+++..|++.||++||++.+|++.|+...
T Consensus 242 ---~~~~~~~~-~~~~~~~----~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~il~~l~~l~ 296 (310)
T 2wqm_A 242 ---NLYSLCKK-IEQCDYP----PLPSDHYSE---ELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296 (310)
T ss_dssp ---CHHHHHHH-HHTTCSC----CCCTTTSCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---hHHHHHHH-hhcccCC----CCcccccCH---HHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 12222221 1111111 111111122 3455666999999999999999999998643
No 259
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.31 E-value=6.2e-13 Score=142.38 Aligned_cols=133 Identities=19% Similarity=0.254 Sum_probs=90.0
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCcee--EEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhc-CCCCCC
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGP--VYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISG-RASSDK 718 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~--vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg-~~p~~~ 718 (866)
..|++...+...++.|||.+..+....... ...+..||.+|+|||...+..++.++||||||++++||+|| +.|+..
T Consensus 156 p~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~ 235 (298)
T 3f66_A 156 ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 235 (298)
T ss_dssp GGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred hheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 346776666678899999998886554322 23345678899999999999999999999999999999995 455543
Q ss_pred CchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 719 SLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 719 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
.... ........ +.. ... ..... ..+.++...|++.+|++||++.||+++|+....
T Consensus 236 ~~~~---~~~~~~~~----~~~--~~~---~~~~~---~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 236 VNTF---DITVYLLQ----GRR--LLQ---PEYCP---DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp SCTT---THHHHHHT----TCC--CCC---CTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCHH---HHHHHHhc----CCC--CCC---CccCC---HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 3221 22222111 110 111 11112 235566779999999999999999999986543
No 260
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.30 E-value=4.4e-13 Score=144.70 Aligned_cols=125 Identities=17% Similarity=0.298 Sum_probs=77.2
Q ss_pred cccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-----------CCCCchhHHHHHHHHHHHHHhc
Q 038019 644 NIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-----------GHLTEKADVFSFGVVALEIISG 712 (866)
Q Consensus 644 ~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-----------~~~t~ksDVySfGvvLlEl~tg 712 (866)
|++. .+...++.|||.+..+.............||..|+|||.+.. ..++.++|||||||+++||+||
T Consensus 157 NIl~-~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g 235 (313)
T 3cek_A 157 NFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 235 (313)
T ss_dssp GEEE-ETTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHS
T ss_pred cEEE-ECCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhC
Confidence 5554 345678999999998876544334445679999999999865 5789999999999999999999
Q ss_pred CCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 713 RASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 713 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
+.|+...... ............ .........+ .+.++...|++.||++||++.||++
T Consensus 236 ~~pf~~~~~~-----~~~~~~~~~~~~-----~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 236 KTPFQQIINQ-----ISKLHAIIDPNH-----EIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp SCTTTTCCSH-----HHHHHHHHCTTS-----CCCCCCCSCH---HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCchhhHHHH-----HHHHHHHHhccc-----ccCCcccchH---HHHHHHHHHccCCcccCcCHHHHhc
Confidence 9998754321 111112111111 1111111222 3455666999999999999999985
No 261
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.30 E-value=8.1e-13 Score=149.18 Aligned_cols=74 Identities=23% Similarity=0.229 Sum_probs=60.3
Q ss_pred CcccCHHHHH--HHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 643 PNIFGYAELR--SATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 643 ~~~~~~~~~~--~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
.|++...+.. .++.|||.+...+.... ...||..|+|||++.+..++.++|||||||+++||+||+.|+....
T Consensus 229 ~NILl~~~~~~~vkL~DFG~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 229 ENILLKQQGRSGIKVIDFGSSCYEHQRVY-----TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp GGEEESSTTSCCEEECCCTTCEETTCCCC-----SSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHeEEccCCCcceEEeecccceecCCccc-----ccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 3666655544 68899999987765432 2468999999999999999999999999999999999999997654
Q ss_pred h
Q 038019 721 D 721 (866)
Q Consensus 721 ~ 721 (866)
.
T Consensus 304 ~ 304 (429)
T 3kvw_A 304 E 304 (429)
T ss_dssp H
T ss_pred H
Confidence 3
No 262
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.30 E-value=8.9e-13 Score=144.54 Aligned_cols=122 Identities=19% Similarity=0.266 Sum_probs=86.1
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeee---cCCCCchhHHHHHHHHHHHHHhcCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAM---RGHLTEKADVFSFGVVALEIISGRASSD 717 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~---~~~~t~ksDVySfGvvLlEl~tg~~p~~ 717 (866)
...|++...+...++.|||.+..+.... ...||++|+|||.+. .+.++.++|||||||+++||+||+.|+.
T Consensus 181 kp~NIll~~~~~~kL~DfG~a~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~ 254 (348)
T 1u5q_A 181 KAGNILLSEPGLVKLGDFGSASIMAPAN------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 254 (348)
T ss_dssp SGGGEEEETTTEEEECCCTTCBSSSSBC------CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred CHHHEEECCCCCEEEeeccCceecCCCC------cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 3347777777778899999998876432 246899999999884 5789999999999999999999999987
Q ss_pred CCchhhhhcHHHHHHHHhhcCCcccccCCcc-cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 038019 718 KSLDMEKIYLLEWAWNLHENNQSFGLVDPTL-TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAM 783 (866)
Q Consensus 718 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~ 783 (866)
...... ......... .+.+ .....++ +.++...|++.+|++|||+.++++.
T Consensus 255 ~~~~~~------~~~~~~~~~------~~~~~~~~~~~~---l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 255 NMNAMS------ALYHIAQNE------SPALQSGHWSEY---FRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp TSCHHH------HHHHHHHSC------CCCCCCTTSCHH---HHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCChHH------HHHHHHhcC------CCCCCCCCCCHH---HHHHHHHHcccChhhCcCHHHHhhC
Confidence 543221 122222211 1111 1111223 4456669999999999999999753
No 263
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.30 E-value=9.4e-13 Score=138.60 Aligned_cols=124 Identities=16% Similarity=0.227 Sum_probs=80.9
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCC---chhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLT---EKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t---~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
.|++...+...++.+|+........ +..||+.|+|||.+.....+ .++||||||++++||+||+.|+...
T Consensus 142 ~Nil~~~~~~~~l~~~~~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 214 (271)
T 3kmu_A 142 RSVMIDEDMTARISMADVKFSFQSP-------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL 214 (271)
T ss_dssp GGEEECTTSCEEEEGGGSCCTTSCT-------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS
T ss_pred ceEEEcCCcceeEEeccceeeeccc-------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 3566555544555555554443322 23589999999998765444 4899999999999999999999754
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
...+ ........+ ..+.+..... ..+.++...|++.||++|||+.||++.|+..
T Consensus 215 ~~~~------~~~~~~~~~-----~~~~~~~~~~---~~~~~li~~~l~~~p~~Rps~~~il~~L~~l 268 (271)
T 3kmu_A 215 SNME------IGMKVALEG-----LRPTIPPGIS---PHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268 (271)
T ss_dssp CHHH------HHHHHHHSC-----CCCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ChHH------HHHHHHhcC-----CCCCCCCCCC---HHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 3322 111111111 1122221122 2355566699999999999999999999853
No 264
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.30 E-value=3.4e-13 Score=142.63 Aligned_cols=122 Identities=23% Similarity=0.288 Sum_probs=74.0
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCC-CchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHL-TEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~-t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++...+...++.|||.++.+..+.. .....||.+|+|||.+.+..+ +.++||||||++++||+||+.|++...
T Consensus 140 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 216 (275)
T 2eue_A 140 PENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216 (275)
T ss_dssp GGGEEECTTSCEEECCSSCC------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred hHhEEECCCCCEEEeecccceeccCccc---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 3467777776788999999988876543 344568999999999887665 789999999999999999999997543
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
... +. .....+.. .+...... .+.++...|++.||++|||+.|+++
T Consensus 217 ~~~---~~----~~~~~~~~------~~~~~~~~---~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 217 IPV---LF----KNISNGVY------TLPKFLSP---GAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHH---HH----HHHHHTCC------CCCTTSCH---HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHH---HH----HHHHhCCC------CCCccCCH---HHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 221 11 11111111 11111122 3455666999999999999999964
No 265
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.30 E-value=5.9e-13 Score=139.94 Aligned_cols=130 Identities=22% Similarity=0.251 Sum_probs=90.2
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~ 720 (866)
..|++...+...++.|||.+..+..... ....+..+|..|+|||......++.++||||||++++||+| |+.|+....
T Consensus 132 p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 210 (267)
T 3t9t_A 132 ARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 210 (267)
T ss_dssp GGGEEECGGGCEEECCTTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred hheEEECCCCCEEEcccccccccccccc-cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC
Confidence 3467776777788999999887754321 11223456788999999998999999999999999999999 899987543
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
..+ ....+ ..+. .+....... ..+.+++..|++.+|++||++.|+++.|+..
T Consensus 211 ~~~---~~~~i----~~~~-----~~~~~~~~~---~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (267)
T 3t9t_A 211 NSE---VVEDI----STGF-----RLYKPRLAS---THVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262 (267)
T ss_dssp HHH---HHHHH----HTTC-----CCCCCTTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHH---HHHHH----hcCC-----cCCCCccCc---HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 221 12111 1111 011111112 2345566799999999999999999999854
No 266
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.30 E-value=1.3e-12 Score=138.32 Aligned_cols=124 Identities=20% Similarity=0.239 Sum_probs=82.3
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCCch
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKSLD 721 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~~ 721 (866)
.|++...+...++.|||.+...+... ....++.+|+|||......++.++||||||++++||+| |+.|+.....
T Consensus 146 ~Nil~~~~~~~~l~Dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 220 (278)
T 1byg_A 146 RNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 220 (278)
T ss_dssp GGEEECTTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG
T ss_pred ceEEEeCCCcEEEeeccccccccccc-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 36666666677889999888665432 22357889999999999999999999999999999998 9999875432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAG 786 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~ 786 (866)
.+ +... ...+. .+....... ..+.++...|++.+|++||++.|+++.|+.
T Consensus 221 ~~---~~~~----~~~~~-----~~~~~~~~~---~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 270 (278)
T 1byg_A 221 KD---VVPR----VEKGY-----KMDAPDGCP---PAVYEVMKNCWHLDAAMRPSFLQLREQLEH 270 (278)
T ss_dssp GG---HHHH----HTTTC-----CCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HH---HHHH----HhcCC-----CCCCcccCC---HHHHHHHHHHhcCChhhCCCHHHHHHHHHH
Confidence 22 2211 11111 111111112 235556669999999999999999999985
No 267
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.30 E-value=4.3e-13 Score=145.70 Aligned_cols=116 Identities=18% Similarity=0.166 Sum_probs=80.5
Q ss_pred HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHHH
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEWA 731 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~~ 731 (866)
..++.|||.++.+..+.. .....||+.|+|||.+....++.++|||||||+++||+||+.|+......+ ....+
T Consensus 156 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~~ 229 (326)
T 2y0a_A 156 RIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---TLANV 229 (326)
T ss_dssp CEEECCCTTCEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHHHH
T ss_pred CEEEEECCCCeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---HHHHH
Confidence 467899999988865432 334579999999999998999999999999999999999999997543222 11111
Q ss_pred HHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 732 WNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 732 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.. ... . ..+...... ...+.++...|++.||++|||+.|+++
T Consensus 230 ~~----~~~-~-~~~~~~~~~---~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 230 SA----VNY-E-FEDEYFSNT---SALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HH----TCC-C-CCHHHHTTS---CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred Hh----cCC-C-cCccccccC---CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11 100 0 000000011 123455667999999999999999986
No 268
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.30 E-value=5.5e-13 Score=144.96 Aligned_cols=124 Identities=17% Similarity=0.174 Sum_probs=80.6
Q ss_pred cccCHH---HHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 644 NIFGYA---ELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 644 ~~~~~~---~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
|++... +...++.|||.++.++... ......||++|+|||.+....++.++|||||||+++||+||+.|+....
T Consensus 161 NIl~~~~~~~~~~kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 237 (327)
T 3lm5_A 161 NILLSSIYPLGDIKIVDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED 237 (327)
T ss_dssp GEEESCBTTBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEEecCCCCCcEEEeeCccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 555433 3456889999998886543 2344579999999999999999999999999999999999999997644
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+. ...+.. ... ....+..... ...+.+++..|++.||++|||+.|+++
T Consensus 238 ~~~~---~~~i~~----~~~-~~~~~~~~~~----~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 238 NQET---YLNISQ----VNV-DYSEETFSSV----SQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHHH---HHHHHH----TCC-CCCTTTTTTS----CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred chHH---HHHHHh----ccc-ccCchhhccc----CHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 3221 111111 000 0111111112 223455667999999999999999864
No 269
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.30 E-value=1e-12 Score=148.71 Aligned_cols=126 Identities=13% Similarity=0.151 Sum_probs=86.5
Q ss_pred CcccCH---HHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 643 PNIFGY---AELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 643 ~~~~~~---~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
.|++.. .+...++.|||.+..+.... ....+..||++|+|||.+....++.++||||+||+++||++|+.|+...
T Consensus 139 ~NIll~~~~~~~~vkL~DFG~a~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~ 216 (444)
T 3soa_A 139 ENLLLASKLKGAAVKLADFGLAIEVEGEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE 216 (444)
T ss_dssp TTEEESBSSTTCCEEECCCSSCBCCCTTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred HHEEEeccCCCCcEEEccCceeEEecCCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc
Confidence 355554 23456789999998876543 2334567999999999999889999999999999999999999999754
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
...+ +.. ....+.. ....+.....+ + .+.++...|++.||++|||+.|+++
T Consensus 217 ~~~~---~~~----~i~~~~~-~~~~~~~~~~s-~---~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 217 DQHR---LYQ----QIKAGAY-DFPSPEWDTVT-P---EAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp SHHH---HHH----HHHHTCC-CCCTTTTTTSC-H---HHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cHHH---HHH----HHHhCCC-CCCccccccCC-H---HHHHHHHHHcCCChhHCCCHHHHhc
Confidence 3221 221 1111211 11111111222 2 3445666999999999999999986
No 270
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.30 E-value=5.1e-13 Score=145.49 Aligned_cols=139 Identities=22% Similarity=0.284 Sum_probs=83.7
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecC-CCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRG-HLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~-~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++...+...++.|||.+..+...+ ..+....||.+|+|||.+.+. .++.++|||||||+++||+||+.|+....
T Consensus 152 p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 229 (331)
T 4aaa_A 152 PENILVSQSGVVKLCDFGFARTLAAPG--EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS 229 (331)
T ss_dssp GGGEEECTTSCEEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred hheEEEcCCCcEEEEeCCCceeecCCc--cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 346776666678899999998876543 345566799999999998765 78999999999999999999999997654
Q ss_pred hhhhhcHHHH--------HHHHhhcC-CcccccCCccc-cc-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEW--------AWNLHENN-QSFGLVDPTLT-EF-----NDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~--------~~~~~~~~-~~~~~~d~~l~-~~-----~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+....... ....+... .......+.+. .. .......+.+++..|++.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 230 DIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 3321111000 00111110 01111112111 00 1112345667778999999999999999875
No 271
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.30 E-value=8.4e-13 Score=142.81 Aligned_cols=136 Identities=16% Similarity=0.191 Sum_probs=87.2
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++...+...++.|||.++.++... ..+....||..|+|||.+.+ ..++.++|||||||+++||+||+.|+....
T Consensus 136 p~NIl~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 213 (317)
T 2pmi_A 136 PQNLLINKRGQLKLGDFGLARAFGIPV--NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213 (317)
T ss_dssp GGGEEECTTCCEEECCCSSCEETTSCC--CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred hHHeEEcCCCCEEECcCccceecCCCc--ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 346776666678899999998876432 12334578999999999875 468999999999999999999999997654
Q ss_pred hhhhhcHHHHHHHHhhc---CCcc-----cccCCccc----cc---------CHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 038019 721 DMEKIYLLEWAWNLHEN---NQSF-----GLVDPTLT----EF---------NDKEALRVIGVALLCTQTSPMMRPPMSR 779 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~---~~~~-----~~~d~~l~----~~---------~~~~~~~~~~la~~C~~~~p~~RPsm~~ 779 (866)
..+. ...+...... .... ...++.+. .. .......+.++...|++.||++|||+.|
T Consensus 214 ~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e 290 (317)
T 2pmi_A 214 DEEQ---LKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQ 290 (317)
T ss_dssp HHHH---HHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred hHHH---HHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHH
Confidence 3322 2222221110 0000 00001000 00 0001124566777999999999999998
Q ss_pred HHH
Q 038019 780 VVA 782 (866)
Q Consensus 780 V~~ 782 (866)
+++
T Consensus 291 ~l~ 293 (317)
T 2pmi_A 291 ALH 293 (317)
T ss_dssp HTT
T ss_pred HhC
Confidence 864
No 272
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.30 E-value=5.9e-13 Score=149.58 Aligned_cols=120 Identities=11% Similarity=-0.005 Sum_probs=84.8
Q ss_pred hccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceee----------ecCCCCchhHHHHHHHH
Q 038019 636 LVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYA----------MRGHLTEKADVFSFGVV 705 (866)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~----------~~~~~t~ksDVySfGvv 705 (866)
++...+..|++...+...++.|||.++..+.. .....| .+|||||++ ....++.++|||||||+
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi 306 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA 306 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence 33333444777777777899999998877643 344567 999999998 56678999999999999
Q ss_pred HHHHHhcCCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 038019 706 ALEIISGRASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVV 781 (866)
Q Consensus 706 LlEl~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~ 781 (866)
+|||+||+.|+......+. ...++... ...+ ..+.+++..|++.||++||++.|++
T Consensus 307 l~elltg~~Pf~~~~~~~~---------------~~~~~~~~-~~~~----~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 307 IYWIWCADLPNTDDAALGG---------------SEWIFRSC-KNIP----QPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHHHSSCCCCTTGGGSC---------------SGGGGSSC-CCCC----HHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHHCCCCCCCcchhhh---------------HHHHHhhc-ccCC----HHHHHHHHHHccCChhhCcCHHHHH
Confidence 9999999999975432211 00111100 1122 3355566699999999999987764
No 273
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.30 E-value=4.6e-13 Score=145.17 Aligned_cols=123 Identities=15% Similarity=0.218 Sum_probs=86.1
Q ss_pred cccCHH--HHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 644 NIFGYA--ELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 644 ~~~~~~--~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
|++... +...++.|||.+..+..+. .+....||+.|+|||.+....++.++|||||||+++||+||+.|+.....
T Consensus 132 NIl~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 208 (321)
T 1tki_A 132 NIIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN 208 (321)
T ss_dssp GEEESSSSCCCEEECCCTTCEECCTTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred HEEEccCCCCCEEEEECCCCeECCCCC---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH
Confidence 454433 4556789999999887653 34556799999999999888899999999999999999999999976433
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcc-cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTL-TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.+ +.+.+. . +.. ..++.. ... ...+.++...|++.||++|||+.|+++
T Consensus 209 ~~---~~~~i~---~-~~~--~~~~~~~~~~----s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 209 QQ---IIENIM---N-AEY--TFDEEAFKEI----SIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HH---HHHHHH---H-TCC--CCCHHHHTTS----CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HH---HHHHHH---c-CCC--CCChhhhccC----CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 22 221111 1 110 001000 111 123556677999999999999999986
No 274
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.30 E-value=1.4e-12 Score=143.58 Aligned_cols=136 Identities=18% Similarity=0.164 Sum_probs=88.1
Q ss_pred CCcccCHH-HHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecC-CCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 642 KPNIFGYA-ELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRG-HLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 642 ~~~~~~~~-~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~-~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
..|++... +...++.|||.++.+..... .....||.+|+|||.+.+. .++.++|||||||+++||+||+.|+...
T Consensus 159 p~NIll~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 235 (360)
T 3e3p_A 159 PHNVLVNEADGTLKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD 235 (360)
T ss_dssp GGGEEEETTTTEEEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred HHHEEEeCCCCcEEEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC
Confidence 34666654 66788999999998875542 2234689999999998654 4899999999999999999999999865
Q ss_pred chhhhhcHHHHHHH----------Hhh-cCCcccccCCc-c------cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 038019 720 LDMEKIYLLEWAWN----------LHE-NNQSFGLVDPT-L------TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVV 781 (866)
Q Consensus 720 ~~~~~~~l~~~~~~----------~~~-~~~~~~~~d~~-l------~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~ 781 (866)
..... +...+.. ... ........+.. . ..........+.++...|++.||++|||+.||+
T Consensus 236 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 313 (360)
T 3e3p_A 236 NSAGQ--LHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEAL 313 (360)
T ss_dssp SHHHH--HHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred ChHHH--HHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHh
Confidence 43322 1111111 000 00000000000 0 011111234566777899999999999999997
Q ss_pred H
Q 038019 782 A 782 (866)
Q Consensus 782 ~ 782 (866)
+
T Consensus 314 ~ 314 (360)
T 3e3p_A 314 C 314 (360)
T ss_dssp T
T ss_pred c
Confidence 5
No 275
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.29 E-value=7.2e-13 Score=145.40 Aligned_cols=125 Identities=16% Similarity=0.194 Sum_probs=75.7
Q ss_pred cccCHH---HHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 644 NIFGYA---ELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 644 ~~~~~~---~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
|++... +...++.|||.++.+.... ......||++|+|||++.+..++.++|||||||+++||+||+.|+....
T Consensus 178 NIll~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 254 (349)
T 2w4o_A 178 NLLYATPAPDAPLKIADFGLSKIVEHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254 (349)
T ss_dssp GEEESSSSTTCCEEECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT
T ss_pred cEEEecCCCCCCEEEccCccccccCccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc
Confidence 555432 5567889999998776432 2344578999999999999999999999999999999999999987543
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
... .+. .....+.. ....+.....+ ..+.++...|++.||++||++.|+++
T Consensus 255 ~~~--~~~----~~i~~~~~-~~~~~~~~~~~----~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 255 GDQ--FMF----RRILNCEY-YFISPWWDEVS----LNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp CHH--HHH----HHHHTTCC-CCCTTTTTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccH--HHH----HHHHhCCC-ccCCchhhhCC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 221 111 11111111 11111111222 23455667999999999999999976
No 276
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.29 E-value=5.1e-14 Score=151.11 Aligned_cols=139 Identities=16% Similarity=0.166 Sum_probs=91.8
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCce-eEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYG-PVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g-~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
...|++...+...++.|||.+..+...... .......||..|+|||.+.+..++.++||||||++++||+||+.|+...
T Consensus 153 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 232 (302)
T 4e5w_A 153 AARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSP 232 (302)
T ss_dssp SGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred chheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcch
Confidence 334677766777889999999888755321 2223346788899999999999999999999999999999999885421
Q ss_pred chh--------hhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 720 LDM--------EKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 720 ~~~--------~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
... ........+......+.. ... +......+.+++..|++.||++|||+.||+++|+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 233 MALFLKMIGPTHGQMTVTRLVNTLKEGKR-----LPC---PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHHHHHHHCSCCGGGHHHHHHHHHHTTCC-----CCC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhHHhhccCCcccccCHHHHHHHHhccCC-----CCC---CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 100 000011111111111111 111 111123455677799999999999999999999854
No 277
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.29 E-value=1.2e-12 Score=142.62 Aligned_cols=118 Identities=17% Similarity=0.226 Sum_probs=86.0
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCC-CchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHL-TEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~-t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
...|++...+...++.|||.+..+..+.. .....||++|+|||.+....+ +.++|||||||+++||++|+.|+...
T Consensus 157 kp~NIll~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 233 (335)
T 3dls_A 157 KDENIVIAEDFTIKLIDFGSAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCEL 233 (335)
T ss_dssp SGGGEEECTTSCEEECCCTTCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSG
T ss_pred CHHHEEEcCCCcEEEeecccceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhH
Confidence 33477777777788999999998876543 334579999999999987776 88999999999999999999998642
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAM 783 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~ 783 (866)
... ......+ .....+ .+.++...|++.+|++||++.|+++.
T Consensus 234 ~~~-----------------~~~~~~~--~~~~~~---~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 234 EET-----------------VEAAIHP--PYLVSK---ELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp GGG-----------------TTTCCCC--SSCCCH---HHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred HHH-----------------HhhccCC--CcccCH---HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 110 0001111 111122 34556669999999999999999874
No 278
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.29 E-value=1.7e-12 Score=145.13 Aligned_cols=129 Identities=15% Similarity=0.144 Sum_probs=81.4
Q ss_pred CcccCHH---HHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 643 PNIFGYA---ELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 643 ~~~~~~~---~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
.|++... +...++.|||.++.+.... ......||..|+|||++..+.++.++|||||||+++||+||+.||...
T Consensus 190 ~Nill~~~~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 266 (400)
T 1nxk_A 190 ENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 266 (400)
T ss_dssp GGEEESSSSTTCCEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred ceEEEecCCCCccEEEEecccccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence 3565554 4567899999998775432 233457899999999999999999999999999999999999999754
Q ss_pred chhhh-hcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 038019 720 LDMEK-IYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAM 783 (866)
Q Consensus 720 ~~~~~-~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~ 783 (866)
..... ......+. .+.. ..-.+...... ..+.++...|++.||++|||+.||++.
T Consensus 267 ~~~~~~~~~~~~i~----~~~~-~~~~~~~~~~s----~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 267 HGLAISPGMKTRIR----MGQY-EFPNPEWSEVS----EEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTCSSCCSHHHHHH----HTCC-CCCTTTTTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccccccHHHHHHHH----cCcc-cCCCcccccCC----HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 32211 01111111 1111 11111111122 234556669999999999999999874
No 279
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.29 E-value=2.1e-12 Score=139.08 Aligned_cols=138 Identities=20% Similarity=0.243 Sum_probs=83.1
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
.|++...+...++.|||.+..+.... ..+....||.+|+|||.+.+ ..++.++|||||||+++||+||+.|+.....
T Consensus 131 ~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 208 (311)
T 4agu_A 131 ENILITKHSVIKLCDFGFARLLTGPS--DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD 208 (311)
T ss_dssp GGEEECTTSCEEECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred hhEEEcCCCCEEEeeCCCchhccCcc--cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 46666666677899999998876432 23445678999999999875 6789999999999999999999999976554
Q ss_pred hhhhcHHHHHH--------HHhhcCCc---ccccCCccc-c---cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 722 MEKIYLLEWAW--------NLHENNQS---FGLVDPTLT-E---FNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 722 ~~~~~l~~~~~--------~~~~~~~~---~~~~d~~l~-~---~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.+......... ..+..... ..+.++.-. . ........+.++...|++.||++|||+.||++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 209 VDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 33222211110 01111100 011111110 0 00111234566778999999999999999985
No 280
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.29 E-value=7.1e-13 Score=144.05 Aligned_cols=131 Identities=20% Similarity=0.191 Sum_probs=89.5
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDKS 719 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~ 719 (866)
...|++...+...++.|||.++....... .....++.+|+|||.+....++.++||||||++++||+| |+.|+...
T Consensus 169 kp~NIl~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~ 245 (327)
T 1fvr_A 169 AARNILVGENYVAKIADFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 245 (327)
T ss_dssp SGGGEEECGGGCEEECCTTCEESSCEECC---C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccceEEEcCCCeEEEcccCcCcccccccc---ccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC
Confidence 33477777777788999998875432111 112246889999999988899999999999999999998 99998754
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCccc-ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcCC
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLT-EFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIEV 790 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~~ 790 (866)
...+ + ......+. .+... ..+ ..+.++...|++.+|++||++.|+++.|+.....
T Consensus 246 ~~~~---~----~~~~~~~~-----~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 246 TCAE---L----YEKLPQGY-----RLEKPLNCD----DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp CHHH---H----HHHGGGTC-----CCCCCTTBC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cHHH---H----HHHhhcCC-----CCCCCCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 3221 1 11122211 11111 122 2355667799999999999999999999865543
No 281
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.29 E-value=5e-13 Score=158.72 Aligned_cols=132 Identities=18% Similarity=0.204 Sum_probs=90.3
Q ss_pred CCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHh-cCCCCCC
Q 038019 640 GSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIIS-GRASSDK 718 (866)
Q Consensus 640 ~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t-g~~p~~~ 718 (866)
....|++...+...++.|||.++.+........ ....+|+.|||||.+....++.++|||||||++|||++ |+.|+..
T Consensus 517 ikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 595 (656)
T 2j0j_A 517 IAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595 (656)
T ss_dssp CSGGGEEEEETTEEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cchHhEEEeCCCCEEEEecCCCeecCCCcceec-cCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 333477777777788999999998866543222 22357789999999999999999999999999999997 9999875
Q ss_pred CchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 719 SLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 719 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
....+ +...+. .+.. +.+.. .....+.+++..|++.||++||++.||+++|+..
T Consensus 596 ~~~~~---~~~~i~----~~~~-----~~~~~---~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 596 VKNND---VIGRIE----NGER-----LPMPP---NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp CCHHH---HHHHHH----HTCC-----CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCHHH---HHHHHH----cCCC-----CCCCc---cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 44322 222221 1111 11111 1123455677799999999999999999999854
No 282
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.29 E-value=1.6e-12 Score=141.72 Aligned_cols=123 Identities=19% Similarity=0.175 Sum_probs=85.4
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
..|++...+...++.|||.++.....+ .......||+.|+|||.+.+..++.++|||||||+++||+||+.|+.....
T Consensus 133 p~NIll~~~g~vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~ 210 (337)
T 1o6l_A 133 LENLMLDKDGHIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210 (337)
T ss_dssp GGGEEECTTSCEEECCCTTCBCSCCTT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HHHEEECCCCCEEEeeccchhhcccCC--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH
Confidence 347777777778899999988643322 122345689999999999999999999999999999999999999975432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRP-----PMSRVVA 782 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RP-----sm~~V~~ 782 (866)
.. +.+.+ .. +. ..+......+ +.++...|++.||++|| ++.||++
T Consensus 211 ~~---~~~~i---~~-~~------~~~p~~~s~~---~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 211 ER---LFELI---LM-EE------IRFPRTLSPE---AKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HH---HHHHH---HH-CC------CCCCTTSCHH---HHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HH---HHHHH---Hc-CC------CCCCCCCCHH---HHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 21 11111 11 11 1111111223 44455699999999999 8888864
No 283
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.29 E-value=1.1e-12 Score=145.19 Aligned_cols=127 Identities=15% Similarity=0.135 Sum_probs=81.3
Q ss_pred HHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhh---cH
Q 038019 651 LRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKI---YL 727 (866)
Q Consensus 651 ~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~---~l 727 (866)
...++.|||.+..++... ....||.+|+|||.+.+..++.++|||||||+++||+||+.|+......... ..
T Consensus 175 ~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 249 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEHY-----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249 (373)
T ss_dssp EEEEECCCTTCEETTBCC-----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred ceEEEcccccccccCCCC-----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence 356789999998876432 2346899999999999999999999999999999999999999754321100 01
Q ss_pred HHHHHHHh------------------hcCC-cccccCCcc----------cccCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 038019 728 LEWAWNLH------------------ENNQ-SFGLVDPTL----------TEFNDKEALRVIGVALLCTQTSPMMRPPMS 778 (866)
Q Consensus 728 ~~~~~~~~------------------~~~~-~~~~~d~~l----------~~~~~~~~~~~~~la~~C~~~~p~~RPsm~ 778 (866)
...+.... .... ...+..... ...+......+.++...|++.||++|||+.
T Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 329 (373)
T 1q8y_A 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329 (373)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence 11111100 0000 000000000 012345556777888899999999999999
Q ss_pred HHHH
Q 038019 779 RVVA 782 (866)
Q Consensus 779 ~V~~ 782 (866)
||++
T Consensus 330 ell~ 333 (373)
T 1q8y_A 330 GLVN 333 (373)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 9976
No 284
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.29 E-value=1e-12 Score=144.27 Aligned_cols=140 Identities=10% Similarity=0.051 Sum_probs=88.9
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCC--ceeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCC
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGG--YGPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDK 718 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~--~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~ 718 (866)
..|++...+...++.|||.++.+.... ....+....||.+|+|||.+.+ ..++.++|||||||+++||+||+.|+..
T Consensus 152 p~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 231 (351)
T 3mi9_A 152 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 231 (351)
T ss_dssp GGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred HHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCC
Confidence 346777667778899999998776322 1223445578999999998875 5689999999999999999999999986
Q ss_pred CchhhhhcHHHHHHHHhhcCCcccc-----------cCCcccccCHHH------HHHHHHHHHHccCCCCCCCCCHHHHH
Q 038019 719 SLDMEKIYLLEWAWNLHENNQSFGL-----------VDPTLTEFNDKE------ALRVIGVALLCTQTSPMMRPPMSRVV 781 (866)
Q Consensus 719 ~~~~~~~~l~~~~~~~~~~~~~~~~-----------~d~~l~~~~~~~------~~~~~~la~~C~~~~p~~RPsm~~V~ 781 (866)
.........+............... .... .....+. ...+.++...|++.||++|||+.|++
T Consensus 232 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 310 (351)
T 3mi9_A 232 NTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQ-KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 310 (351)
T ss_dssp SSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSC-CCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CChHHHHHHHHHHhCCCChhhccccccchhhccccccccc-ccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHh
Confidence 5433322211111110100000000 0000 0000111 12356788899999999999999987
Q ss_pred H
Q 038019 782 A 782 (866)
Q Consensus 782 ~ 782 (866)
+
T Consensus 311 ~ 311 (351)
T 3mi9_A 311 N 311 (351)
T ss_dssp T
T ss_pred C
Confidence 5
No 285
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.29 E-value=9.5e-13 Score=145.88 Aligned_cols=126 Identities=19% Similarity=0.153 Sum_probs=86.1
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec---CCCCchhHHHHHHHHHHHHHhcCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR---GHLTEKADVFSFGVVALEIISGRASSD 717 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~---~~~t~ksDVySfGvvLlEl~tg~~p~~ 717 (866)
...|++...+...++.|||.+..+..+.. .....||++|+|||++.. ..++.++|||||||+++||+||+.|+.
T Consensus 142 kp~NIll~~~g~vkL~DFG~a~~~~~~~~---~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~ 218 (384)
T 4fr4_A 142 KPDNILLDEHGHVHITDFNIAAMLPRETQ---ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218 (384)
T ss_dssp SGGGEEECTTSCEEECCCTTCEECCTTCC---BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred cHHHeEECCCCCEEEeccceeeeccCCCc---eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCC
Confidence 33477777777888999999998865532 334579999999999864 458999999999999999999999997
Q ss_pred CCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 038019 718 KSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPP-MSRVVA 782 (866)
Q Consensus 718 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPs-m~~V~~ 782 (866)
.........+...... .. ....... ...+..+...|++.+|++||+ +.+|.+
T Consensus 219 ~~~~~~~~~~~~~~~~----~~------~~~p~~~---s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 219 IRSSTSSKEIVHTFET----TV------VTYPSAW---SQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCTTSCHHHHHHHHHH----CC------CCCCTTS---CHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CCCCccHHHHHHHHhh----cc------cCCCCcC---CHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 5433222222221111 10 1111111 223455666999999999998 666653
No 286
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.29 E-value=2.1e-12 Score=146.11 Aligned_cols=119 Identities=21% Similarity=0.284 Sum_probs=77.3
Q ss_pred HHHhcCCccccccCCCCc--eeEEEeecCCCCccCceeeec-------CCCCchhHHHHHHHHHHHHHh-cCCCCCCCch
Q 038019 652 RSATKDFNRSNKLGEGGY--GPVYKVTANSYGYLAPEYAMR-------GHLTEKADVFSFGVVALEIIS-GRASSDKSLD 721 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~--g~vy~~~~gt~gY~aPE~~~~-------~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~~ 721 (866)
..++.|||.++.+..+.. ........||++|+|||++.. +.++.++|||||||+++||+| |+.|+.....
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~ 245 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245 (434)
T ss_dssp EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence 567899999998876532 222345579999999999865 679999999999999999999 9999875432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccc-cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTE-FNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.. . ........ .+.+.. ........+.+++..|++.||++||++.||++
T Consensus 246 ~~-~---~i~~~~~~--------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 246 RE-S---NIIRGIFS--------LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HH-H---HHHHTCCC--------CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hH-H---HHhcCCCC--------cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 21 1 11111000 011111 12333456677888999999999999999975
No 287
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.28 E-value=9.5e-13 Score=144.51 Aligned_cols=129 Identities=15% Similarity=0.158 Sum_probs=84.2
Q ss_pred HHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHH
Q 038019 649 AELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLL 728 (866)
Q Consensus 649 ~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~ 728 (866)
.+...++.|||.+...+... ....||.+|+|||.+.+..++.++|||||||+++||+||+.|+......+.....
T Consensus 177 ~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (355)
T 2eu9_A 177 KNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 251 (355)
T ss_dssp SCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred CCCcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 44567889999998766443 2346899999999999999999999999999999999999999865433222111
Q ss_pred HHHHHH-----hhcCCcccc-------cCC-------------cc---cccCHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 038019 729 EWAWNL-----HENNQSFGL-------VDP-------------TL---TEFNDKEALRVIGVALLCTQTSPMMRPPMSRV 780 (866)
Q Consensus 729 ~~~~~~-----~~~~~~~~~-------~d~-------------~l---~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V 780 (866)
...... ......... .+. .+ ......+...+.++...|++.||++|||+.||
T Consensus 252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~ 331 (355)
T 2eu9_A 252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA 331 (355)
T ss_dssp HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence 111100 000000000 000 00 00111233466778889999999999999998
Q ss_pred HH
Q 038019 781 VA 782 (866)
Q Consensus 781 ~~ 782 (866)
++
T Consensus 332 l~ 333 (355)
T 2eu9_A 332 LL 333 (355)
T ss_dssp TT
T ss_pred hc
Confidence 63
No 288
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.28 E-value=7.6e-13 Score=141.29 Aligned_cols=137 Identities=15% Similarity=0.133 Sum_probs=86.8
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCC-CCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGH-LTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~-~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++...+...++.|||.++.++... ..+....||..|+|||.+.+.. ++.++|||||||+++||+||+.|+....
T Consensus 129 p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~ 206 (292)
T 3o0g_A 129 PQNLLINRNGELKLANFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN 206 (292)
T ss_dssp GGGEEECTTSCEEECCCTTCEECCSCC--SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS
T ss_pred HHHEEEcCCCCEEEeecccceecCCcc--ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC
Confidence 346776666678899999998876432 2234457899999999987765 8999999999999999999988865433
Q ss_pred hhhhhcHHHHHHHHhhc---CCcc---cccC----------CcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHEN---NQSF---GLVD----------PTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~---~~~~---~~~d----------~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
... .....+...... .... +..+ ..+..........+.++...|++.||++|||+.|+++
T Consensus 207 ~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 207 DVD--DQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp SHH--HHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CHH--HHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 221 122222221111 0000 0000 0000111111234456667999999999999999875
No 289
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.28 E-value=8.4e-13 Score=143.25 Aligned_cols=134 Identities=15% Similarity=0.131 Sum_probs=87.9
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchh
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDM 722 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~ 722 (866)
.|++...+...++.|||.++.++... ......||..|+|||.+..+.++.++|||||||+++||+||+.|+......
T Consensus 149 ~Nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 225 (326)
T 1blx_A 149 QNILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225 (326)
T ss_dssp GGEEECTTCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred HHeEEcCCCCEEEecCcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH
Confidence 36666666677899999998776432 123456899999999999999999999999999999999999999865432
Q ss_pred hhhcHHHHHHHHhhc---CCccc-c------c----CCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 723 EKIYLLEWAWNLHEN---NQSFG-L------V----DPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 723 ~~~~l~~~~~~~~~~---~~~~~-~------~----d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
+ ....+...... ..... . . ...+..........+.++...|++.||++||++.|+++
T Consensus 226 ~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 226 D---QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp H---HHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred H---HHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 2 22222221110 00000 0 0 00111111111234456677999999999999999974
No 290
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.28 E-value=4.1e-13 Score=142.54 Aligned_cols=125 Identities=16% Similarity=0.228 Sum_probs=89.2
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
..|++...+...++.|||.+..+..+.. .....||.+|+|||......++.++||||||++++||+||+.|+..
T Consensus 150 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~--- 223 (284)
T 2a19_B 150 PSNIFLVDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE--- 223 (284)
T ss_dssp GGGEEEEETTEEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH---
T ss_pred HHHEEEcCCCCEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh---
Confidence 3467666666788999999988876542 2234689999999999999999999999999999999999987531
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
.. .+ ......+.. ...... .+.++...|++.||++||++.|+++.|+....
T Consensus 224 --~~---~~-~~~~~~~~~--------~~~~~~---~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 224 --TS---KF-FTDLRDGII--------SDIFDK---KEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp --HH---HH-HHHHHTTCC--------CTTSCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred --HH---HH-HHHhhcccc--------cccCCH---HHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 11 11 111122211 111112 24456669999999999999999999985443
No 291
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.28 E-value=1.1e-12 Score=142.97 Aligned_cols=126 Identities=17% Similarity=0.170 Sum_probs=82.9
Q ss_pred HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHHH
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEWA 731 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~~ 731 (866)
..++.|||.+...+... ....||.+|+|||.+.+..++.++|||||||+++||+||+.|+......+........
T Consensus 175 ~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 249 (339)
T 1z57_A 175 DIKVVDFGSATYDDEHH-----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249 (339)
T ss_dssp CEEECCCSSCEETTSCC-----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHH
T ss_pred CceEeeCcccccCcccc-----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 45788999988765432 2346899999999999999999999999999999999999999865433322222111
Q ss_pred HHH-----hhcCCcccc---------------------cCCcc--cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 732 WNL-----HENNQSFGL---------------------VDPTL--TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 732 ~~~-----~~~~~~~~~---------------------~d~~l--~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
... ......... ..+.. ..........+.+++..|++.||++|||+.||++
T Consensus 250 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp HCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence 100 000000000 00000 0112234456778888999999999999999874
No 292
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.28 E-value=1.6e-12 Score=139.06 Aligned_cols=134 Identities=19% Similarity=0.236 Sum_probs=91.0
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCcee--EEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGP--VYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~--vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
..|++...+...++.|||.++.+....+.. ......+|..|+|||...+..++.++||||||++++||+||+.|+...
T Consensus 152 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~ 231 (298)
T 3pls_A 152 ARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRH 231 (298)
T ss_dssp GGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred cceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCcc
Confidence 346776666678899999998776543211 122346788999999999999999999999999999999966664432
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
... ..+...+.. +.. +....... ..+.+++..|++.+|++|||+.+++++|+....
T Consensus 232 ~~~--~~~~~~~~~----~~~-----~~~~~~~~---~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 232 IDP--FDLTHFLAQ----GRR-----LPQPEYCP---DSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp SCG--GGHHHHHHT----TCC-----CCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCH--HHHHHHhhc----CCC-----CCCCccch---HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 221 222222221 110 11111112 235566679999999999999999999986543
No 293
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.28 E-value=1.1e-12 Score=140.54 Aligned_cols=134 Identities=25% Similarity=0.308 Sum_probs=81.6
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCc---eeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCC
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGY---GPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDK 718 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~---g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~ 718 (866)
.|++...+...++.|||.+..+..++. ........||.+|+|||.... ..++.++||||||++++||+||+.|+..
T Consensus 150 ~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 229 (303)
T 2vwi_A 150 GNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229 (303)
T ss_dssp GGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred hhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 366666666778999999887765432 122334579999999999875 5789999999999999999999999976
Q ss_pred CchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 719 SLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 719 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
...... .................++....... ..+.+++..|++.||++||++.||++
T Consensus 230 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 230 YPPMKV---LMLTLQNDPPSLETGVQDKEMLKKYG---KSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp SCGGGH---HHHHHTSSCCCTTC-----CCCCCCC---HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CchhhH---HHHHhccCCCccccccccchhhhhhh---HHHHHHHHHHccCChhhCcCHHHHhh
Confidence 543221 11111100000000111122211112 23455667999999999999999975
No 294
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.28 E-value=1.5e-12 Score=144.78 Aligned_cols=126 Identities=15% Similarity=0.150 Sum_probs=83.6
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
...|++...+...++.|||.++.....+ .......||+.|+|||++.+..++.++|||||||+++||+||+.|++...
T Consensus 180 Kp~NILl~~~g~ikL~DFGla~~~~~~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~ 257 (396)
T 4dc2_A 180 KLDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 257 (396)
T ss_dssp CGGGEEECTTSCEEECCCTTCBCCCCTT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTT
T ss_pred CHHHEEECCCCCEEEeecceeeecccCC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 3347777777788999999998633221 22344579999999999999999999999999999999999999996432
Q ss_pred hhh--hhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCH
Q 038019 721 DME--KIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPM 777 (866)
Q Consensus 721 ~~~--~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm 777 (866)
..+ .....++.......+.. .+...... .+.++...|++.||++||++
T Consensus 258 ~~~~~~~~~~~~~~~~i~~~~~------~~p~~~s~---~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 258 SSDNPDQNTEDYLFQVILEKQI------RIPRSLSV---KAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp C------CCHHHHHHHHHHCCC------CCCTTSCH---HHHHHHHHHTCSCTTTSTTC
T ss_pred cccccchhhHHHHHHHHhcccc------CCCCcCCH---HHHHHHHHHhcCCHhHcCCC
Confidence 111 11111222222222211 11111122 34456669999999999995
No 295
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.28 E-value=1.9e-12 Score=146.15 Aligned_cols=120 Identities=24% Similarity=0.307 Sum_probs=74.8
Q ss_pred HHHHHhcCCccccccCCCCce-eEEEeecCCCCccCceeee---cCCCCchhHHHHHHHHHHHHHh-cCCCCCCCchhhh
Q 038019 650 ELRSATKDFNRSNKLGEGGYG-PVYKVTANSYGYLAPEYAM---RGHLTEKADVFSFGVVALEIIS-GRASSDKSLDMEK 724 (866)
Q Consensus 650 ~~~~~~~dF~~~~~lg~g~~g-~vy~~~~gt~gY~aPE~~~---~~~~t~ksDVySfGvvLlEl~t-g~~p~~~~~~~~~ 724 (866)
.++.++.|||.++.+..+... ....+..||++|+|||.+. ...++.++|||||||+++||+| |+.|+.......
T Consensus 159 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~- 237 (432)
T 3p23_A 159 KIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ- 237 (432)
T ss_dssp BCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH-
T ss_pred ceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH-
Confidence 345668999999988755321 1233457999999999987 5678899999999999999999 898885432211
Q ss_pred hcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 725 IYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 725 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
. ..... ........+ .......+.+++..|++.||++||++.||++
T Consensus 238 ---~---~~~~~-~~~~~~~~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 238 ---A---NILLG-ACSLDCLHP-----EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ---H---HHHTT-CCCCTTSCT-----TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---H---HHHhc-cCCccccCc-----cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1 11111 101111111 1122233556777999999999999999983
No 296
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.27 E-value=3e-12 Score=141.72 Aligned_cols=138 Identities=17% Similarity=0.135 Sum_probs=80.0
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
..|++...+...++.|||.++..+... ......||..|+|||.+.+..++.++|||||||+++||+||+.|+.....
T Consensus 155 p~NIl~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 231 (371)
T 2xrw_A 155 PSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 231 (371)
T ss_dssp GGGEEECTTSCEEECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HHHEEEcCCCCEEEEEeeccccccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 346777667778899999998876542 23345789999999999999999999999999999999999999976433
Q ss_pred hhhhcHH----------------HHHHHHhhcCC------cccccC----CcccccCHHHHHHHHHHHHHccCCCCCCCC
Q 038019 722 MEKIYLL----------------EWAWNLHENNQ------SFGLVD----PTLTEFNDKEALRVIGVALLCTQTSPMMRP 775 (866)
Q Consensus 722 ~~~~~l~----------------~~~~~~~~~~~------~~~~~d----~~l~~~~~~~~~~~~~la~~C~~~~p~~RP 775 (866)
.+....+ ..+........ ..+.+. |...+........+.++..+|++.||++||
T Consensus 232 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~ 311 (371)
T 2xrw_A 232 IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 311 (371)
T ss_dssp HHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSC
T ss_pred HHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCC
Confidence 2211000 00000000000 000000 000001112234567788899999999999
Q ss_pred CHHHHHH
Q 038019 776 PMSRVVA 782 (866)
Q Consensus 776 sm~~V~~ 782 (866)
|+.|+++
T Consensus 312 t~~e~l~ 318 (371)
T 2xrw_A 312 SVDEALQ 318 (371)
T ss_dssp CHHHHHH
T ss_pred CHHHHhC
Confidence 9999986
No 297
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.27 E-value=1.4e-12 Score=143.53 Aligned_cols=116 Identities=16% Similarity=0.147 Sum_probs=81.0
Q ss_pred HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHHH
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEWA 731 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~~ 731 (866)
..++.|||.+..+..+. .+....||++|+|||.+....++.++|||||||+++||++|+.|+......+ +...
T Consensus 157 ~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~---~~~~- 229 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---TLAN- 229 (361)
T ss_dssp CEEECCCSSCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HHHH-
T ss_pred CEEEEecCCceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH---HHHH-
Confidence 46789999998887643 2345579999999999998899999999999999999999999997643322 1111
Q ss_pred HHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 732 WNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 732 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
+..+.. ..++.......+ .+.++...|++.||++|||+.|+++
T Consensus 230 ---i~~~~~--~~~~~~~~~~s~---~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 230 ---ITAVSY--DFDEEFFSQTSE---LAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp ---HHTTCC--CCCHHHHTTSCH---HHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---HHhcCC--CCCchhccCCCH---HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111110 011111011112 3445666999999999999999875
No 298
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.27 E-value=1.8e-12 Score=147.34 Aligned_cols=124 Identities=17% Similarity=0.168 Sum_probs=85.9
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
...|++...+...++.|||.++.....+ .......||++|+|||++.+..++.++|||||||+++||+||+.|+....
T Consensus 276 kp~NIll~~~~~~kl~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 353 (446)
T 4ejn_A 276 KLENLMLDKDGHIKITDFGLCKEGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 353 (446)
T ss_dssp CGGGEEECSSSCEEECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CHHHEEECCCCCEEEccCCCceeccCCC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 3347777777778899999998654332 33445689999999999999999999999999999999999999997543
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRP-----PMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RP-----sm~~V~~ 782 (866)
... +...+. . +. ..+...... .+.++...|++.||++|| ++.|+++
T Consensus 354 ~~~---~~~~i~---~-~~------~~~p~~~~~---~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 354 HEK---LFELIL---M-EE------IRFPRTLGP---EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHH---HHHHHH---H-CC------CCCCTTSCH---HHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHH---HHHHHH---h-CC------CCCCccCCH---HHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 322 221111 1 11 111111122 344566699999999999 9998874
No 299
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.27 E-value=1.3e-12 Score=138.12 Aligned_cols=127 Identities=16% Similarity=0.230 Sum_probs=86.6
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCC-CchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHL-TEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~-t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
.|++...+...++.|||.+..+..+..........||.+|+|||......+ +.++||||||++++||+||+.|++....
T Consensus 134 ~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 213 (276)
T 2yex_A 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213 (276)
T ss_dssp GGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCT
T ss_pred HHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCch
Confidence 366666666678899999887765544334445678999999999887665 7899999999999999999999975432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.. .....|.. ... .. +.....+ ..+.++...|++.+|++|||+.||++
T Consensus 214 ~~-~~~~~~~~-----~~~--~~-~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 214 SC-QEYSDWKE-----KKT--YL-NPWKKID----SAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TS-HHHHHHHT-----TCT--TS-TTGGGSC----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HH-HHHHHhhh-----ccc--cc-CchhhcC----HHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 21 12222221 100 00 1111122 23445667999999999999999875
No 300
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.27 E-value=1e-12 Score=144.80 Aligned_cols=116 Identities=14% Similarity=0.188 Sum_probs=81.3
Q ss_pred HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHHH
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEWA 731 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~~ 731 (866)
..++.|||.+..+.... .+.+..||++|+|||.+....++.++|||||||+++||+||+.|+...... .+...+
T Consensus 169 ~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~---~~~~~i 242 (362)
T 2bdw_A 169 AVKLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYAQI 242 (362)
T ss_dssp CEEECCCTTCBCCTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHH
T ss_pred CEEEeecCcceEecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHHHHH
Confidence 36789999998887543 234567999999999999889999999999999999999999998754322 122211
Q ss_pred HHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 732 WNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 732 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+.. ....+.....+ ..+.++...|++.||++||++.|+++
T Consensus 243 ----~~~~~-~~~~~~~~~~~----~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 243 ----KAGAY-DYPSPEWDTVT----PEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp ----HHTCC-CCCTTGGGGSC----HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----HhCCC-CCCcccccCCC----HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11211 01111111122 23445666999999999999999875
No 301
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.26 E-value=4.7e-12 Score=142.55 Aligned_cols=135 Identities=20% Similarity=0.176 Sum_probs=87.5
Q ss_pred CcccCHHH-HHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecC-CCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 643 PNIFGYAE-LRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRG-HLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 643 ~~~~~~~~-~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~-~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
.|++...+ ...++.|||.++.+..+... ....||..|+|||++.+. .++.++|||||||+++||++|+.||....
T Consensus 185 ~NILl~~~~~~~kl~DFG~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~ 261 (420)
T 1j1b_A 185 QNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261 (420)
T ss_dssp GGEEEETTTTEEEECCCTTCEECCTTCCC---CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred hhEEEeCCCCeEEeccchhhhhcccCCCc---eeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 36666544 34589999999987655432 234689999999998754 79999999999999999999999998654
Q ss_pred hhhhhcHHHHHHHH-------hh--cCCcccccCCcccccC------HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNL-------HE--NNQSFGLVDPTLTEFN------DKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~-------~~--~~~~~~~~d~~l~~~~------~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+ .+.+.+... +. .....+...|.+...+ ......+.++..+|++.||++||++.|+++
T Consensus 262 ~~~--~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 262 GVD--QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHH--HHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHH--HHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 322 122222110 00 0111111112221111 111235666777999999999999999975
No 302
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.26 E-value=2.4e-12 Score=136.40 Aligned_cols=120 Identities=19% Similarity=0.234 Sum_probs=81.8
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchh
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDM 722 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~ 722 (866)
.|++...+...++.|||.+....... .....||..|+|||.+.+..++.++||||||++++||++|+.|+......
T Consensus 138 ~Nili~~~~~~~l~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 213 (279)
T 3fdn_A 138 ENLLLGSAGELKIADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213 (279)
T ss_dssp GGEEECTTSCEEECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred HhEEEcCCCCEEEEeccccccCCccc----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH
Confidence 36666666677889999887665432 23447899999999999999999999999999999999999999754322
Q ss_pred hhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 723 EKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 723 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
+ ... ..... +........+ .+.++...|++.+|++||++.||++
T Consensus 214 ~---~~~----~~~~~------~~~~~~~~~~---~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 214 E---TYK----RISRV------EFTFPDFVTE---GARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp H---HHH----HHHHT------CCCCCTTSCH---HHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred H---HHH----HHHhC------CCCCCCcCCH---HHHHHHHHHhccChhhCCCHHHHhh
Confidence 2 111 11111 1111111222 3445666999999999999999986
No 303
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.26 E-value=1.4e-12 Score=144.35 Aligned_cols=124 Identities=20% Similarity=0.178 Sum_probs=85.6
Q ss_pred cccC--HHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 644 NIFG--YAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 644 ~~~~--~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
|++. ..+...++.|||.++.+..... +....||++|+|||++..+.++.++|||||||+++||+||+.|+.....
T Consensus 217 NIll~~~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 293 (373)
T 2x4f_A 217 NILCVNRDAKQIKIIDFGLARRYKPREK---LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND 293 (373)
T ss_dssp GEEEEETTTTEEEECCCSSCEECCTTCB---CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred HEEEecCCCCcEEEEeCCCceecCCccc---cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 5554 3445678999999998875543 2334699999999999999999999999999999999999999976443
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.+ .. ....... . ...++.....+ ..+.++...|++.+|++||++.|+++
T Consensus 294 ~~---~~---~~i~~~~-~-~~~~~~~~~~~----~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 294 AE---TL---NNILACR-W-DLEDEEFQDIS----EEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HH---HH---HHHHHTC-C-CSCSGGGTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HH---HH---HHHHhcc-C-CCChhhhccCC----HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 22 11 1111111 0 01111111222 23455666999999999999999986
No 304
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.26 E-value=1.5e-12 Score=142.99 Aligned_cols=115 Identities=18% Similarity=0.194 Sum_probs=80.4
Q ss_pred HHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHHHH
Q 038019 653 SATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEWAW 732 (866)
Q Consensus 653 ~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~~~ 732 (866)
.++.|||.+..++... .......||+.|+|||.+....++.++|||||||+++||+||+.|+..... .+...+
T Consensus 172 vkl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~i- 244 (351)
T 3c0i_A 172 VKLGGFGVAIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE----RLFEGI- 244 (351)
T ss_dssp EEECCCTTCEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH----HHHHHH-
T ss_pred EEEecCcceeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH----HHHHHH-
Confidence 5789999998887643 223445799999999999999999999999999999999999999975321 111111
Q ss_pred HHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 733 NLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 733 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+.. ..++...... ...+.++...|++.||++||++.|+++
T Consensus 245 ---~~~~~--~~~~~~~~~~---s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 245 ---IKGKY--KMNPRQWSHI---SESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp ---HHTCC--CCCHHHHTTS---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---HcCCC--CCCccccccC---CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111 0111110111 123455667999999999999999975
No 305
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.26 E-value=2.4e-12 Score=143.05 Aligned_cols=124 Identities=20% Similarity=0.187 Sum_probs=85.9
Q ss_pred cccCH--HHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 644 NIFGY--AELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 644 ~~~~~--~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
|++.. .....++.|||.++.+..... .....||.+|+|||.+....++.++|||||||+++||+||+.|+.....
T Consensus 179 NIll~~~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 255 (387)
T 1kob_A 179 NIMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD 255 (387)
T ss_dssp GEEESSTTCCCEEECCCTTCEECCTTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred HeEEecCCCCceEEEecccceecCCCcc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH
Confidence 55443 223467899999998876543 3445799999999999999999999999999999999999999975432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcc-cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTL-TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAM 783 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~ 783 (866)
.+ ....+.. ... ..++.. ...+ ..+.++...|++.||++|||+.|+++.
T Consensus 256 ~~---~~~~i~~----~~~--~~~~~~~~~~s----~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 256 LE---TLQNVKR----CDW--EFDEDAFSSVS----PEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp HH---HHHHHHH----CCC--CCCSSTTTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HH---HHHHHHh----CCC--CCCccccccCC----HHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 21 1211111 110 111111 1222 234556669999999999999999863
No 306
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.26 E-value=2e-12 Score=138.80 Aligned_cols=124 Identities=21% Similarity=0.312 Sum_probs=86.8
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchh
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDM 722 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~ 722 (866)
.|++...+...++.|||.+..+...... .....||..|+|||......++.++||||||++++||+||+.|+......
T Consensus 148 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 225 (303)
T 3a7i_A 148 ANVLLSEHGEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM 225 (303)
T ss_dssp GGEEECTTSCEEECCCTTCEECBTTBCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred heEEECCCCCEEEeecccceecCccccc--cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH
Confidence 3666666667789999999877654321 12346899999999999999999999999999999999999998754332
Q ss_pred hhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 038019 723 EKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAM 783 (866)
Q Consensus 723 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~ 783 (866)
. ....+ ..+. .+.+...... .+.++...|++.+|++||++.||++.
T Consensus 226 ~---~~~~~----~~~~-----~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 226 K---VLFLI----PKNN-----PPTLEGNYSK---PLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp H---HHHHH----HHSC-----CCCCCSSCCH---HHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred H---HHHHh----hcCC-----CCCCccccCH---HHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 2 11111 1111 1122111122 34556679999999999999999763
No 307
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.26 E-value=1.8e-12 Score=141.80 Aligned_cols=127 Identities=15% Similarity=0.093 Sum_probs=81.8
Q ss_pred cccCHHHH--HHHhcCCccccccCCCCcee--EEEeecCCCCccCceeeec--CCCCchhHHHHHHHHHHHHHhcCCCCC
Q 038019 644 NIFGYAEL--RSATKDFNRSNKLGEGGYGP--VYKVTANSYGYLAPEYAMR--GHLTEKADVFSFGVVALEIISGRASSD 717 (866)
Q Consensus 644 ~~~~~~~~--~~~~~dF~~~~~lg~g~~g~--vy~~~~gt~gY~aPE~~~~--~~~t~ksDVySfGvvLlEl~tg~~p~~ 717 (866)
|++...+- ..++.|||.+..+.....+. ......||+.|+|||.+.. ..++.++|||||||+++||+||+.|+.
T Consensus 198 NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 277 (345)
T 3hko_A 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFP 277 (345)
T ss_dssp GEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred hEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 55544332 56789999998775422222 2344579999999999865 788999999999999999999999997
Q ss_pred CCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 718 KSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 718 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.....+. ......... ....+.....+ ..+.++...|++.+|++||++.|+++
T Consensus 278 ~~~~~~~------~~~~~~~~~--~~~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 278 GVNDADT------ISQVLNKKL--CFENPNYNVLS----PLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp CSSHHHH------HHHHHHCCC--CTTSGGGGGSC----HHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred CCChHHH------HHHHHhccc--ccCCcccccCC----HHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 5443221 111111110 11111111122 23445666999999999999999976
No 308
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.26 E-value=1.6e-12 Score=142.41 Aligned_cols=138 Identities=14% Similarity=0.124 Sum_probs=89.3
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecC-CCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRG-HLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~-~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++...+...++.|||.++.++... ..+....||..|+|||.+.+. .++.++|||||||+++||++|+.|+....
T Consensus 140 p~Nil~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~ 217 (346)
T 1ua2_A 140 PNNLLLDENGVLKLADFGLAKSFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS 217 (346)
T ss_dssp GGGEEECTTCCEEECCCGGGSTTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEEcCCCCEEEEecccceeccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC
Confidence 346777667778899999998886432 233455789999999998654 58999999999999999999999987644
Q ss_pred hhhhhcHHHHHHHHhhc---CCccc------ccCC-cccccC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHEN---NQSFG------LVDP-TLTEFN-----DKEALRVIGVALLCTQTSPMMRPPMSRVVAML 784 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~---~~~~~------~~d~-~l~~~~-----~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L 784 (866)
..+ ....+...... ....+ .+.. .....+ ......+.++...|++.||++|||+.|+++.-
T Consensus 218 ~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 218 DLD---QLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp HHH---HHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred HHH---HHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 322 12222221110 00000 0000 000111 11123466677799999999999999998643
No 309
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.26 E-value=1.5e-12 Score=146.68 Aligned_cols=118 Identities=18% Similarity=0.223 Sum_probs=74.4
Q ss_pred HHHHhcCCccccccCCCCceeEEEeecCCCCccCceeee---cCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcH
Q 038019 651 LRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAM---RGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYL 727 (866)
Q Consensus 651 ~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~---~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l 727 (866)
...++.|||.++.++... ......||++|+|||++. ...++.++|||||||+++||+||+.|+...... ..+
T Consensus 279 ~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~--~~~ 353 (419)
T 3i6u_A 279 CLIKITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSL 353 (419)
T ss_dssp CCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS--CCH
T ss_pred ceEEEeecccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch--HHH
Confidence 346789999999887643 334567999999999875 467899999999999999999999999754322 122
Q ss_pred HHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 728 LEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 728 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.+.+. .+... ..+.... .....+.++...|++.||++||++.|+++
T Consensus 354 ~~~i~----~~~~~--~~~~~~~---~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 354 KDQIT----SGKYN--FIPEVWA---EVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHHH----TTCCC--CCHHHHT---TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHh----cCCCC--CCchhhc---ccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 22221 11110 0011000 11234556777999999999999999876
No 310
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.25 E-value=1.6e-12 Score=138.19 Aligned_cols=115 Identities=18% Similarity=0.159 Sum_probs=73.5
Q ss_pred HHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHH
Q 038019 651 LRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEW 730 (866)
Q Consensus 651 ~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~ 730 (866)
...++.|||.++.+..+. ......||..|+|||.+. +.++.++||||||++++||++|+.|+......+ +...
T Consensus 164 ~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~---~~~~ 236 (285)
T 3is5_A 164 SPIKIIDFGLAELFKSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE---VQQK 236 (285)
T ss_dssp CCEEECCCCCCCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHH
T ss_pred CCEEEEeeecceecCCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH---HHhh
Confidence 446789999998876543 233457899999999875 678999999999999999999999997543222 1111
Q ss_pred HHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 731 AWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 731 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
... .. . .......... ..+.++...|++.||++||++.||++
T Consensus 237 ~~~---~~-~--~~~~~~~~~~----~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 237 ATY---KE-P--NYAVECRPLT----PQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHH---CC-C--CCCC--CCCC----HHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred hcc---CC-c--ccccccCcCC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111 00 0 0000001111 23445667999999999999999975
No 311
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.25 E-value=1.1e-12 Score=139.69 Aligned_cols=124 Identities=22% Similarity=0.240 Sum_probs=74.4
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceee----ecCCCCchhHHHHHHHHHHHHHhcCCCCCC
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYA----MRGHLTEKADVFSFGVVALEIISGRASSDK 718 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~----~~~~~t~ksDVySfGvvLlEl~tg~~p~~~ 718 (866)
.|++...+...++.|||.+..+..... .....||.+|+|||.+ ....++.++||||||++++||+||+.|++.
T Consensus 139 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (290)
T 3fme_A 139 SNVLINALGQVKMCDFGISGYLVDDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215 (290)
T ss_dssp GGCEECTTCCEEBCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred HHEEECCCCCEEEeecCCccccccccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence 366666666778999999988765432 2334689999999996 567899999999999999999999999975
Q ss_pred CchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 719 SLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 719 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..... ..+ ....... .+.... ......+.+++..|++.+|++|||+.||++
T Consensus 216 ~~~~~-~~~----~~~~~~~------~~~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 216 WGTPF-QQL----KQVVEEP------SPQLPA--DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CSCHH-HHH----HHHHHSC------CCCCCT--TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cCchH-HHH----HHHhccC------CCCccc--ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 32211 111 1111111 111110 011223556677999999999999999975
No 312
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.25 E-value=2e-12 Score=137.19 Aligned_cols=115 Identities=14% Similarity=0.187 Sum_probs=80.8
Q ss_pred HHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHHHH
Q 038019 653 SATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEWAW 732 (866)
Q Consensus 653 ~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~~~ 732 (866)
.++.|||.+..++.... +....||.+|+|||.+.+..++.++||||||++++||++|+.|+....... ....
T Consensus 147 ~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~~~~-- 218 (284)
T 3kk8_A 147 VKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR---LYAQ-- 218 (284)
T ss_dssp EEECCCTTCEECCSSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHH--
T ss_pred EEEeeceeeEEcccCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH---HHHH--
Confidence 57899999987765432 344579999999999999999999999999999999999999997543322 1111
Q ss_pred HHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 733 NLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 733 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
...+.. ....+.....+ ..+.++...|++.+|++||++.|+++
T Consensus 219 --~~~~~~-~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 219 --IKAGAY-DYPSPEWDTVT----PEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp --HHHTCC-CCCTTTTTTSC----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --HHhccc-cCCchhhcccC----HHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111111 11111111222 23455666999999999999999976
No 313
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.25 E-value=1.1e-12 Score=146.55 Aligned_cols=139 Identities=11% Similarity=0.053 Sum_probs=90.7
Q ss_pred HHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec--------CCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 648 YAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR--------GHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 648 ~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~--------~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
..+...++.|||.++.+..+.. +....||.+|+|||++.. ..++.++|||||||+++||+||+.||...
T Consensus 150 ~~~~~~kL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~ 226 (396)
T 4eut_A 150 DGQSVYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (396)
T ss_dssp TSCEEEEECCGGGCEECCCGGG---SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECT
T ss_pred CCceeEEEecCCCceEccCCCc---cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 4444567899999988765432 234568999999998764 67889999999999999999999998653
Q ss_pred chhh-hhcHHHHHHHHhhcCCccc---ccC------Ccc---cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 038019 720 LDME-KIYLLEWAWNLHENNQSFG---LVD------PTL---TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAG 786 (866)
Q Consensus 720 ~~~~-~~~l~~~~~~~~~~~~~~~---~~d------~~l---~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~ 786 (866)
.... ......-+........... ..+ +.+ ..........+..+...|++.||++||++.|+++.++.
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~ 306 (396)
T 4eut_A 227 EGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (396)
T ss_dssp TCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred CcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHH
Confidence 3221 1111111111111111100 000 011 12234455566678889999999999999999999886
Q ss_pred CcC
Q 038019 787 DIE 789 (866)
Q Consensus 787 ~~~ 789 (866)
...
T Consensus 307 il~ 309 (396)
T 4eut_A 307 ILH 309 (396)
T ss_dssp HHT
T ss_pred Hhh
Confidence 544
No 314
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.25 E-value=1.5e-12 Score=142.82 Aligned_cols=119 Identities=18% Similarity=0.218 Sum_probs=79.6
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
...|++...+...++.|||.++.....+ .......||+.|||||.+....++.++||||+||+++||+||+.|+....
T Consensus 151 kp~NILl~~~g~ikL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 228 (353)
T 3txo_A 151 KLDNVLLDHEGHCKLADFGMCKEGICNG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228 (353)
T ss_dssp CGGGEEECTTSCEEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CHHHEEECCCCCEEEccccceeecccCC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC
Confidence 3347777777778899999988644332 23344579999999999999899999999999999999999999997644
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCH
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPM 777 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm 777 (866)
..+ +.+.+ . .+.. .......++ +.++...|++.+|++||++
T Consensus 229 ~~~---~~~~i---~-~~~~------~~p~~~~~~---~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 229 EDD---LFEAI---L-NDEV------VYPTWLHED---ATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp HHH---HHHHH---H-HCCC------CCCTTSCHH---HHHHHHHHTCSSGGGSTTS
T ss_pred HHH---HHHHH---H-cCCC------CCCCCCCHH---HHHHHHHHhhhCHHHccCC
Confidence 322 22111 1 1111 111112223 4445669999999999998
No 315
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.25 E-value=2e-12 Score=141.29 Aligned_cols=120 Identities=14% Similarity=0.149 Sum_probs=80.5
Q ss_pred HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHHH
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEWA 731 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~~ 731 (866)
..++.|||.++.+.... .......||..|+|||.+....++.++|||||||+++||++|+.|+..........+..
T Consensus 158 ~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~-- 233 (342)
T 2qr7_A 158 SIRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILA-- 233 (342)
T ss_dssp GEEECCCTTCEECBCTT--CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHH--
T ss_pred eEEEEECCCcccCcCCC--CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHH--
Confidence 46789999998776432 12234578999999999988889999999999999999999999997533222112222
Q ss_pred HHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 732 WNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 732 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.+..+... +.+.......+ .+.++...|++.||++||++.||++
T Consensus 234 --~i~~~~~~--~~~~~~~~~s~---~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 234 --RIGSGKFS--LSGGYWNSVSD---TAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp --HHHHCCCC--CCSTTTTTSCH---HHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --HHccCCcc--cCccccccCCH---HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 12222111 11111111122 3445566999999999999999875
No 316
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.25 E-value=1.4e-12 Score=141.72 Aligned_cols=138 Identities=20% Similarity=0.169 Sum_probs=90.9
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCce-eEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYG-PVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g-~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++...+...++.|||.+..+...... .......++..|+|||......++.++||||||++++||+||+.|+....
T Consensus 173 p~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 252 (326)
T 2w1i_A 173 TRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 252 (326)
T ss_dssp GGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH
T ss_pred cceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCH
Confidence 34677666667889999999888654321 11122356778999999998899999999999999999999998875321
Q ss_pred hh---------hhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 038019 721 DM---------EKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGD 787 (866)
Q Consensus 721 ~~---------~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~ 787 (866)
.. ...............+.. +... ......+.+++..|++.+|++||++.||++.|+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l 320 (326)
T 2w1i_A 253 AEFMRMIGNDKQGQMIVFHLIELLKNNGR-----LPRP---DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320 (326)
T ss_dssp HHHHHHHCTTCCTHHHHHHHHHHHHTTCC-----CCCC---TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHhhccccchhhhHHHHHHHhhcCCC-----CCCC---CcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 10 000111111122221111 1111 11123455677799999999999999999999853
No 317
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.24 E-value=6.6e-12 Score=141.48 Aligned_cols=131 Identities=19% Similarity=0.139 Sum_probs=86.0
Q ss_pred CCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeee-----cCCCCchhHHHHHHHHHHHHHhcCC
Q 038019 640 GSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAM-----RGHLTEKADVFSFGVVALEIISGRA 714 (866)
Q Consensus 640 ~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~-----~~~~t~ksDVySfGvvLlEl~tg~~ 714 (866)
....|++.+.+...++.|||.++.+...+. .......||++|||||++. .+.++.++|||||||+++||+||+.
T Consensus 201 LKp~NILl~~~g~vkL~DFGla~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~ 279 (437)
T 4aw2_A 201 IKPDNILMDMNGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGET 279 (437)
T ss_dssp CSGGGEEECTTSCEEECCCTTCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSC
T ss_pred cCHHHeeEcCCCCEEEcchhhhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCC
Confidence 333477777778889999999988765442 2223357999999999987 5679999999999999999999999
Q ss_pred CCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 038019 715 SSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMM--RPPMSRVVA 782 (866)
Q Consensus 715 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~--RPsm~~V~~ 782 (866)
|+......+ ....+..... ...-|.......+++.. +...|++.+|++ ||++.||++
T Consensus 280 Pf~~~~~~~---~~~~i~~~~~-----~~~~p~~~~~~s~~~~d---Li~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 280 PFYAESLVE---TYGKIMNHKE-----RFQFPTQVTDVSENAKD---LIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp TTCCSSHHH---HHHHHHTHHH-----HCCCCSSCCCSCHHHHH---HHHTTSSCGGGCTTTTTTHHHHT
T ss_pred CCCCCChhH---HHHhhhhccc-----cccCCcccccCCHHHHH---HHHHHhcccccccCCCCHHHHhC
Confidence 998644322 1111111000 01111111111233444 444677777777 999999875
No 318
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.24 E-value=1.9e-12 Score=137.07 Aligned_cols=122 Identities=20% Similarity=0.227 Sum_probs=63.8
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchh
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDM 722 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~ 722 (866)
.|++...+...++.|||.+..+..... ......||.+|+|||......++.++||||||++++||+||+.|+......
T Consensus 141 ~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 218 (278)
T 3cok_A 141 SNLLLTRNMNIKIADFGLATQLKMPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK 218 (278)
T ss_dssp GGEEECTTCCEEECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC
T ss_pred HHEEEcCCCCEEEEeecceeeccCCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH
Confidence 366666666778999999887764321 122346899999999999889999999999999999999999998754321
Q ss_pred hhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 723 EKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 723 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
+. . .. . ...+..+...... .+.+++..|++.||++||++.+|++
T Consensus 219 ~~---~---~~-~------~~~~~~~~~~~~~---~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 219 NT---L---NK-V------VLADYEMPSFLSI---EAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ------------C------CSSCCCCCTTSCH---HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HH---H---HH-H------hhcccCCccccCH---HHHHHHHHHcccCHhhCCCHHHHhc
Confidence 11 0 00 0 0011111111222 3455667999999999999999874
No 319
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.24 E-value=2.7e-12 Score=139.03 Aligned_cols=124 Identities=18% Similarity=0.162 Sum_probs=84.7
Q ss_pred cccCHHHH----HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 644 NIFGYAEL----RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 644 ~~~~~~~~----~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
|++...+. ..++.|||.++.+..+.. +....||..|+|||......++.++||||||++++||+||+.|+...
T Consensus 145 NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 221 (321)
T 2a2a_A 145 NIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221 (321)
T ss_dssp GEEESCTTSSSCCEEECCCTTCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred HEEEecCCCCcCCEEEccCccceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC
Confidence 55544443 467899999988876432 33456899999999999999999999999999999999999999754
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
...+ ... . ...... ..++....... ..+.++...|++.||++|||+.|+++
T Consensus 222 ~~~~---~~~---~-i~~~~~--~~~~~~~~~~~---~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 222 TKQE---TLA---N-ITSVSY--DFDEEFFSHTS---ELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp SHHH---HHH---H-HHTTCC--CCCHHHHTTCC---HHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred CHHH---HHH---H-HHhccc--ccChhhhcccC---HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 3222 111 1 111100 01111111111 23455667999999999999999986
No 320
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.24 E-value=2e-13 Score=144.73 Aligned_cols=126 Identities=15% Similarity=0.110 Sum_probs=86.1
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchh
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDM 722 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~ 722 (866)
.|++...+...++.|||.+..++.... ......||..|+|||......++.++||||||++++||+||+.|+......
T Consensus 145 ~NIl~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 222 (279)
T 2w5a_A 145 ANVFLDGKQNVKLGDFGLARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK 222 (279)
T ss_dssp GGEEECSSSCEEECCCCHHHHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred hhEEEcCCCCEEEecCchheeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH
Confidence 366666666678899999887764321 112346899999999999889999999999999999999999998754322
Q ss_pred hhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 038019 723 EKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLA 785 (866)
Q Consensus 723 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~ 785 (866)
.+.+. ...+... .+..... ..+.++...|++.+|++||++.||++.+.
T Consensus 223 ---~~~~~----i~~~~~~-----~~~~~~~---~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 223 ---ELAGK----IREGKFR-----RIPYRYS---DELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp ---HHHHH----HHHTCCC-----CCCTTSC---HHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred ---HHHHH----Hhhcccc-----cCCcccC---HHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 12221 2222211 1111112 23555666999999999999999998765
No 321
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.24 E-value=4.9e-12 Score=135.79 Aligned_cols=125 Identities=13% Similarity=0.046 Sum_probs=87.0
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCC--CCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGH--LTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~--~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
.|++...+...++.|||.+..+.............||..|+|||...... .+.++||||||++++||+||+.|+....
T Consensus 138 ~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 217 (305)
T 2wtk_C 138 GNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217 (305)
T ss_dssp GGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch
Confidence 36666666677899999998876544444555667999999999887543 4789999999999999999999997543
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAM 783 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~ 783 (866)
..+ +. .....+.. .+..... ..+.++..+|++.||++||++.|+++.
T Consensus 218 ~~~---~~----~~i~~~~~------~~~~~~~---~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 218 IYK---LF----ENIGKGSY------AIPGDCG---PPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHH---HH----HHHHHCCC------CCCSSSC---HHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HHH---HH----HHHhcCCC------CCCCccC---HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 211 11 11111111 1111112 234456669999999999999999863
No 322
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.24 E-value=1.3e-12 Score=142.73 Aligned_cols=122 Identities=19% Similarity=0.227 Sum_probs=85.1
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
..|++...+...++.|||.++....+.. ......||+.|+|||.+.+..++.++|||||||+++||+||+.|+.....
T Consensus 146 p~NIll~~~g~vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~ 223 (345)
T 1xjd_A 146 LDNILLDKDGHIKIADFGMCKENMLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE 223 (345)
T ss_dssp GGGEEECTTSCEEECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred hhhEEECCCCCEEEeEChhhhhcccCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH
Confidence 3477777777788999999986543321 12345799999999999999999999999999999999999999975432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMS-RVV 781 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~-~V~ 781 (866)
.+ +...+ ..+ .+........+ +.++...|++.+|++||++. +|.
T Consensus 224 ~~---~~~~i----~~~------~~~~p~~~s~~---~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 224 EE---LFHSI----RMD------NPFYPRWLEKE---AKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp HH---HHHHH----HHC------CCCCCTTSCHH---HHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred HH---HHHHH----HhC------CCCCCcccCHH---HHHHHHHHhcCCHhHcCCChHHHH
Confidence 21 22111 111 11121212223 44556699999999999997 554
No 323
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.24 E-value=6.5e-12 Score=143.05 Aligned_cols=126 Identities=20% Similarity=0.280 Sum_probs=88.9
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCC-CchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHL-TEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~-t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++...+...++.|||.++.+..+.+ .....||+.|+|||.+.+..+ +.++||||+||+++||+||+.|++...
T Consensus 144 p~NIll~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~ 220 (476)
T 2y94_A 144 PENVLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220 (476)
T ss_dssp GGGEEECTTCCEEECCCSSCEECCTTCC---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEEecCCCeEEEeccchhhcccccc---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC
Confidence 3467776777788999999998876653 334579999999999987765 789999999999999999999997543
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhc
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA--MLAG 786 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~--~L~~ 786 (866)
.. .+... ...+.. ........ .+.++...|++.||++|||+.||++ .+..
T Consensus 221 ~~---~~~~~----i~~~~~------~~p~~~s~---~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~ 272 (476)
T 2y94_A 221 VP---TLFKK----ICDGIF------YTPQYLNP---SVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272 (476)
T ss_dssp SH---HHHHH----HHTTCC------CCCTTCCH---HHHHHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred HH---HHHHH----HhcCCc------CCCccCCH---HHHHHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence 21 12211 111111 11111122 3455666999999999999999986 4443
No 324
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.24 E-value=1.6e-12 Score=141.20 Aligned_cols=125 Identities=16% Similarity=0.214 Sum_probs=84.2
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCcee----------EEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHH
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGP----------VYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEII 710 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~----------vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~ 710 (866)
...|++...+...++.|||.++.++...... ...+..||++|+|||.+.+..++.++|||||||+++||+
T Consensus 191 kp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 270 (332)
T 3qd2_B 191 KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270 (332)
T ss_dssp CGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHH
T ss_pred CcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHH
Confidence 3347777767778899999999887653211 122346999999999999999999999999999999999
Q ss_pred hcCCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 711 SGRASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 711 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
||..|.. +...... ..... ............+.++...|++.||++||++.|+++
T Consensus 271 ~~~~~~~-----~~~~~~~----~~~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 271 YSFSTQM-----ERVRIIT----DVRNL--------KFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp SCCCCHH-----HHHHHHH----HHHTT--------CCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred HcCCChh-----HHHHHHH----Hhhcc--------CCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 9876532 1111111 11111 111111222234566778999999999999999985
No 325
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.24 E-value=1.3e-12 Score=142.05 Aligned_cols=127 Identities=21% Similarity=0.203 Sum_probs=66.6
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceee----ecCCCCchhHHHHHHHHHHHHHhcCCCCC
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYA----MRGHLTEKADVFSFGVVALEIISGRASSD 717 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~----~~~~~t~ksDVySfGvvLlEl~tg~~p~~ 717 (866)
..|++...+...++.|||.++.+..... .....||.+|+|||.+ ....++.++||||||++++||+||+.|+.
T Consensus 154 p~NIll~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 230 (327)
T 3aln_A 154 PSNILLDRSGNIKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP 230 (327)
T ss_dssp GGGEEEETTTEEEECCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSS
T ss_pred HHHEEEcCCCCEEEccCCCceecccccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 3467776777788999999988765432 2233689999999998 56679999999999999999999999987
Q ss_pred CCchhhhhcHHHHHHHHhhcCCcccccCCcccc-cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 718 KSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTE-FNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 718 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
...... +.... ......+.+.. ........+.+++..|++.||++||++.||++
T Consensus 231 ~~~~~~-----~~~~~------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 231 KWNSVF-----DQLTQ------VVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CC------------CC------CCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CcchHH-----HHHHH------HhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 432110 00000 00111111110 01111234556677999999999999999864
No 326
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.24 E-value=2.8e-12 Score=139.47 Aligned_cols=126 Identities=13% Similarity=0.163 Sum_probs=75.5
Q ss_pred HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecC-CCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHH
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRG-HLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEW 730 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~-~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~ 730 (866)
..++.|||.++.++... .......||.+|+|||.+.+. .++.++|||||||+++||+||+.|+......+. +..
T Consensus 175 ~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~- 249 (329)
T 3gbz_A 175 VLKIGDFGLARAFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ--LFK- 249 (329)
T ss_dssp EEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHH-
T ss_pred eEEECcCCCccccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH--HHH-
Confidence 36889999998876432 223445789999999998764 589999999999999999999999976543221 111
Q ss_pred HHHHhh---cCCcccc--------cCCcccccCHH------HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 731 AWNLHE---NNQSFGL--------VDPTLTEFNDK------EALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 731 ~~~~~~---~~~~~~~--------~d~~l~~~~~~------~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
+..... ....... ..+........ ....+.++...|++.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 250 IFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 111110 0000000 00000000000 1134556777999999999999999975
No 327
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.24 E-value=2.9e-12 Score=146.14 Aligned_cols=76 Identities=20% Similarity=0.186 Sum_probs=55.0
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCce-------------------------eEEEeecCCCCccCceee-ec
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYG-------------------------PVYKVTANSYGYLAPEYA-MR 690 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g-------------------------~vy~~~~gt~gY~aPE~~-~~ 690 (866)
|......|++...+...++.|||+++.++....+ ....+.+||..|+|||++ ..
T Consensus 179 HrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 258 (458)
T 3rp9_A 179 HRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQ 258 (458)
T ss_dssp CCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTC
T ss_pred CCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCC
Confidence 3333344777777778899999999988643211 234456889999999976 46
Q ss_pred CCCCchhHHHHHHHHHHHHHhc
Q 038019 691 GHLTEKADVFSFGVVALEIISG 712 (866)
Q Consensus 691 ~~~t~ksDVySfGvvLlEl~tg 712 (866)
..++.++|||||||+++||+||
T Consensus 259 ~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 259 ENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CCCCTHHHHHHHHHHHHHHHTT
T ss_pred CCCCcHhHHHHHHHHHHHHHHh
Confidence 6799999999999999999994
No 328
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.23 E-value=1.7e-12 Score=143.75 Aligned_cols=134 Identities=12% Similarity=0.113 Sum_probs=83.0
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
...|++...+...++.|||.++..+.. ..+..||.+|+|||.+.+ ..++.++|||||||+++||+||+.|+...
T Consensus 171 kp~NIll~~~~~~kL~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 245 (371)
T 4exu_A 171 KPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245 (371)
T ss_dssp CGGGEEECTTCCEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CHHHeEECCCCCEEEEecCcccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 334777777777889999999876543 334578999999999876 78999999999999999999999999864
Q ss_pred chhhhhcHHHHHHHHhhcC--C----------------cccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 038019 720 LDMEKIYLLEWAWNLHENN--Q----------------SFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVV 781 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~--~----------------~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~ 781 (866)
...+. ...+....... . ...................+.++...|++.||++|||+.|++
T Consensus 246 ~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 322 (371)
T 4exu_A 246 DYLDQ---LTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL 322 (371)
T ss_dssp SHHHH---HHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred ChHHH---HHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHh
Confidence 43221 11111110000 0 000000000000111123456677799999999999999987
Q ss_pred H
Q 038019 782 A 782 (866)
Q Consensus 782 ~ 782 (866)
+
T Consensus 323 ~ 323 (371)
T 4exu_A 323 T 323 (371)
T ss_dssp T
T ss_pred c
Confidence 5
No 329
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.23 E-value=1.7e-12 Score=142.57 Aligned_cols=138 Identities=14% Similarity=0.098 Sum_probs=85.0
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCcee--------EEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGP--------VYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISG 712 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~--------vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg 712 (866)
..|++...+...++.|||.++.+....... ......||..|+|||.+.. ..++.++|||||||+++||++|
T Consensus 140 p~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g 219 (353)
T 2b9h_A 140 PSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR 219 (353)
T ss_dssp GGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhC
Confidence 346776666677899999998876432211 1123468999999998754 7899999999999999999999
Q ss_pred CCCCCCCchhhhhcHHHHHHHHhhcC----CcccccC---------------CcccccCHHHHHHHHHHHHHccCCCCCC
Q 038019 713 RASSDKSLDMEKIYLLEWAWNLHENN----QSFGLVD---------------PTLTEFNDKEALRVIGVALLCTQTSPMM 773 (866)
Q Consensus 713 ~~p~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~d---------------~~l~~~~~~~~~~~~~la~~C~~~~p~~ 773 (866)
+.|+......+. ...+....... ....+.+ ..+..........+.++..+|++.||++
T Consensus 220 ~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 296 (353)
T 2b9h_A 220 RPIFPGRDYRHQ---LLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296 (353)
T ss_dssp SCSCCCSSHHHH---HHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGG
T ss_pred CCCCCCCCcHHH---HHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCccc
Confidence 999976443221 11111111100 0000000 0000000111234556777999999999
Q ss_pred CCCHHHHHH
Q 038019 774 RPPMSRVVA 782 (866)
Q Consensus 774 RPsm~~V~~ 782 (866)
|||+.|+++
T Consensus 297 Rpt~~ell~ 305 (353)
T 2b9h_A 297 RITAKEALE 305 (353)
T ss_dssp SCCHHHHHT
T ss_pred CCCHHHHhc
Confidence 999999976
No 330
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.23 E-value=3e-12 Score=141.47 Aligned_cols=134 Identities=14% Similarity=0.127 Sum_probs=87.5
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
...|++...+...++.|||.++..+... .+..||..|+|||.+.+ ..++.++||||+||+++||+||+.|+...
T Consensus 155 kp~NIll~~~~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 229 (367)
T 1cm8_A 155 KPGNLAVNEDCELKILDFGLARQADSEM-----TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229 (367)
T ss_dssp CGGGEEECTTCCEEECCCTTCEECCSSC-----CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CHHHEEEcCCCCEEEEeeeccccccccc-----CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC
Confidence 3346777777778899999998876432 23468999999999876 78999999999999999999999999764
Q ss_pred chhhhhcHHHHHHHHhhc-----------C-------CcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 038019 720 LDMEKIYLLEWAWNLHEN-----------N-------QSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVV 781 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~-----------~-------~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~ 781 (866)
...+. ...+...... . ...+.-...+..........+.++..+|++.||++|||+.|++
T Consensus 230 ~~~~~---l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l 306 (367)
T 1cm8_A 230 DHLDQ---LKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL 306 (367)
T ss_dssp SHHHH---HHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CHHHH---HHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHh
Confidence 43221 1111110000 0 0000001111111111123455666799999999999999998
Q ss_pred H
Q 038019 782 A 782 (866)
Q Consensus 782 ~ 782 (866)
+
T Consensus 307 ~ 307 (367)
T 1cm8_A 307 A 307 (367)
T ss_dssp H
T ss_pred c
Confidence 6
No 331
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.23 E-value=2.6e-12 Score=143.40 Aligned_cols=135 Identities=19% Similarity=0.185 Sum_probs=87.0
Q ss_pred CcccCH-HHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecC-CCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 643 PNIFGY-AELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRG-HLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 643 ~~~~~~-~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~-~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
.|++.. .+...++.|||.++.+..+... ....||..|+|||.+.+. .++.++|||||||+++||++|+.|+....
T Consensus 170 ~Nill~~~~~~~kL~DFG~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 246 (394)
T 4e7w_A 170 QNLLLDPPSGVLKLIDFGSAKILIAGEPN---VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246 (394)
T ss_dssp GGEEEETTTTEEEECCCTTCEECCTTCCC---CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHEEEcCCCCcEEEeeCCCcccccCCCCC---cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 366665 5667789999999887655432 234679999999988654 59999999999999999999999998654
Q ss_pred hhhhhcHHHHHHHH-------hh--cCCcccccCCcccc------cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNL-------HE--NNQSFGLVDPTLTE------FNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~-------~~--~~~~~~~~d~~l~~------~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+. +.+.+... +. .....+..-|.... +.......+.++..+|++.||++|||+.|+++
T Consensus 247 ~~~~--l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 247 GIDQ--LVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHH--HHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHH--HHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 3322 22111110 00 00000000011100 11111234666777999999999999999985
No 332
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.23 E-value=1.1e-12 Score=144.87 Aligned_cols=133 Identities=14% Similarity=0.160 Sum_probs=76.9
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++...+...++.|||.++..+.. ..+..||..|+|||.+.+ ..++.++|||||||+++||+||+.|+....
T Consensus 160 p~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 234 (367)
T 2fst_X 160 PSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234 (367)
T ss_dssp GGGEEECTTCCEEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred HhhEEECCCCCEEEeecccccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 34677766777889999999876543 234578999999999876 689999999999999999999999997644
Q ss_pred hhhhhcHHHHHHHHhhcC---CcccccC----------CcccccCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENN---QSFGLVD----------PTLTEFND-----KEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~---~~~~~~d----------~~l~~~~~-----~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+. ...+....... ....+.. +....... .....+.++..+|++.||++|||+.|+++
T Consensus 235 ~~~~---l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 235 HIDQ---LKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHH---HHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHH---HHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 3222 11111111000 0000000 00000000 01123556777999999999999999975
No 333
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.23 E-value=6.2e-12 Score=133.99 Aligned_cols=122 Identities=15% Similarity=0.159 Sum_probs=83.4
Q ss_pred CcccCH-HHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 643 PNIFGY-AELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 643 ~~~~~~-~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
.|++.. .+...++.|||.+...+... .....||.+|+|||.+. +.++.++||||||++++||+||+.|+.....
T Consensus 160 ~Nil~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 234 (290)
T 1t4h_A 160 DNIFITGPTGSVKIGDLGLATLKRASF----AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN 234 (290)
T ss_dssp GGEEESSTTSCEEECCTTGGGGCCTTS----BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS
T ss_pred HHEEEECCCCCEEEeeCCCcccccccc----cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc
Confidence 366554 55677899999998766543 23456899999999775 6699999999999999999999999975332
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.. ..... ...+.. .+....... ..+.+++..|++.+|++||++.||++
T Consensus 235 ~~-----~~~~~-~~~~~~----~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 235 AA-----QIYRR-VTSGVK----PASFDKVAI---PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HH-----HHHHH-HTTTCC----CGGGGGCCC---HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HH-----HHHHH-HhccCC----ccccCCCCC---HHHHHHHHHHccCChhhCCCHHHHhh
Confidence 21 11111 111111 111111111 23556677999999999999999975
No 334
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.23 E-value=5.4e-12 Score=141.45 Aligned_cols=77 Identities=17% Similarity=0.188 Sum_probs=53.4
Q ss_pred CcccC----HHHHHHHhcCCccccccCCCCc-eeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCC
Q 038019 643 PNIFG----YAELRSATKDFNRSNKLGEGGY-GPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASS 716 (866)
Q Consensus 643 ~~~~~----~~~~~~~~~dF~~~~~lg~g~~-g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~ 716 (866)
.|++. ..+...++.|||.++.++.... ........||+.|+|||.+.+ ..++.++|||||||+++||+||+.|+
T Consensus 157 ~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 236 (405)
T 3rgf_A 157 ANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236 (405)
T ss_dssp GGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred HHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCC
Confidence 36665 4556778999999998764321 122344579999999999876 45999999999999999999999999
Q ss_pred CCC
Q 038019 717 DKS 719 (866)
Q Consensus 717 ~~~ 719 (866)
...
T Consensus 237 ~~~ 239 (405)
T 3rgf_A 237 HCR 239 (405)
T ss_dssp CCC
T ss_pred CCc
Confidence 643
No 335
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.23 E-value=1.6e-12 Score=138.48 Aligned_cols=115 Identities=21% Similarity=0.247 Sum_probs=76.4
Q ss_pred HHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHHH
Q 038019 653 SATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEWA 731 (866)
Q Consensus 653 ~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~~ 731 (866)
.++.|||.+..+.... ...||.+|+|||.+.. ..++.++|||||||+++||+||+.|........ ....
T Consensus 160 ~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~--~~~~-- 229 (289)
T 4fvq_A 160 IKLSDPGISITVLPKD------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ--RKLQ-- 229 (289)
T ss_dssp EEECCCCSCTTTSCHH------HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHH--
T ss_pred eeeccCcccccccCcc------ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH--HHHH--
Confidence 5678888876654322 1357899999999887 789999999999999999999655543222111 1111
Q ss_pred HHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 732 WNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 732 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
..... +.+.... ...+.+++..|++.||++|||+.||++.|+....
T Consensus 230 --~~~~~-------~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 230 --FYEDR-------HQLPAPK---AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp --HHHTT-------CCCCCCS---SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred --Hhhcc-------CCCCCCC---CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 11110 0111101 1224556679999999999999999999996654
No 336
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.23 E-value=2.9e-12 Score=140.17 Aligned_cols=125 Identities=15% Similarity=0.152 Sum_probs=82.2
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
..|++...+...++.|||.++.....+ .......||+.|+|||.+....++.++|||||||+++||+||+.|+.....
T Consensus 138 p~NIll~~~g~~kL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 215 (345)
T 3a8x_A 138 LDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 215 (345)
T ss_dssp GGGEEECTTSCEEECCGGGCBCSCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC
T ss_pred HHHEEECCCCCEEEEeccccccccCCC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccc
Confidence 347777777778899999988643322 123345799999999999999999999999999999999999999964221
Q ss_pred hhh--hcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCH
Q 038019 722 MEK--IYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPM 777 (866)
Q Consensus 722 ~~~--~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm 777 (866)
... .............+.. .+...... .+.++...|++.||++||++
T Consensus 216 ~~~~~~~~~~~~~~~i~~~~~------~~p~~~s~---~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 216 SDNPDQNTEDYLFQVILEKQI------RIPRSLSV---KAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -------CHHHHHHHHHHCCC------CCCTTSCH---HHHHHHHHHTCSSTTTSTTC
T ss_pred ccccccccHHHHHHHHHcCCC------CCCCCCCH---HHHHHHHHHhcCCHhHCCCC
Confidence 110 0111122222222211 11111122 34456669999999999995
No 337
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.23 E-value=3.5e-12 Score=139.83 Aligned_cols=120 Identities=13% Similarity=0.130 Sum_probs=85.0
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
..|++...+...++.|||.++.++.... ...||+.|+|||.+.+..++.++|||||||+++||+||+.|+.....
T Consensus 169 p~NIll~~~g~~kL~DFg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~ 243 (350)
T 1rdq_E 169 PENLLIDQQGYIQVTDFGFAKRVKGRTW-----TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243 (350)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSCBC-----CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cceEEECCCCCEEEcccccceeccCCcc-----cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH
Confidence 3467776677788999999988765432 24689999999999999999999999999999999999999975432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPP-----MSRVVA 782 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPs-----m~~V~~ 782 (866)
.+ +.+ . +..+.. .+...... .+.++...|++.||++||+ +.||.+
T Consensus 244 ~~---~~~---~-i~~~~~------~~p~~~~~---~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 244 IQ---IYE---K-IVSGKV------RFPSHFSS---DLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HH---HHH---H-HHHCCC------CCCTTCCH---HHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HH---HHH---H-HHcCCC------CCCCCCCH---HHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 21 111 1 111211 11111122 3445666999999999998 777764
No 338
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.23 E-value=2.9e-12 Score=140.82 Aligned_cols=133 Identities=12% Similarity=0.109 Sum_probs=82.9
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++...+...++.|||.++..+.. ..+..||.+|+|||.+.+ ..++.++|||||||+++||+||+.|+....
T Consensus 154 p~NIl~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 228 (353)
T 3coi_A 154 PGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 228 (353)
T ss_dssp GGGEEECTTCCEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC
T ss_pred HHHEeECCCCcEEEeecccccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 34677666667789999999876532 334578999999998876 788999999999999999999999997644
Q ss_pred hhhhhcHHHHHHHHhhcC------------------CcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENN------------------QSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~------------------~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+. ...+....... .......+.+..........+.++...|++.||++|||+.|+++
T Consensus 229 ~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 229 YLDQ---LTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHH---HHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHH---HHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 3221 11111110000 00000011111111112234556667999999999999999874
No 339
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.23 E-value=3.5e-12 Score=136.15 Aligned_cols=125 Identities=19% Similarity=0.294 Sum_probs=81.2
Q ss_pred CcccCHH-HHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCC--CCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 643 PNIFGYA-ELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGH--LTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 643 ~~~~~~~-~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~--~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
.|++... +...++.|||.+..+.... .......||.+|+|||....+. ++.++||||||++++||+||+.|+...
T Consensus 151 ~Nil~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (295)
T 2clq_A 151 DNVLINTYSGVLKISDFGTSKRLAGIN--PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228 (295)
T ss_dssp GGEEEETTTCCEEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGG
T ss_pred hhEEEECCCCCEEEeecccccccCCCC--CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCC
Confidence 3555544 5567889999988775422 2223446899999999987653 899999999999999999999998643
Q ss_pred chhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..... ..+..... ...+.+..... ..+.++...|++.||++||++.|+++
T Consensus 229 ~~~~~---~~~~~~~~-------~~~~~~~~~~~---~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 229 GEPQA---AMFKVGMF-------KVHPEIPESMS---AEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp SSHHH---HHHHHHHH-------CCCCCCCTTSC---HHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred CchhH---HHHhhccc-------cccccccccCC---HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22111 11111111 11222222122 23455667999999999999999974
No 340
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.23 E-value=4e-12 Score=151.46 Aligned_cols=124 Identities=18% Similarity=0.185 Sum_probs=86.5
Q ss_pred hccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCC
Q 038019 636 LVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRAS 715 (866)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p 715 (866)
++......|++...+...++.|||+++.....+ .......||+.|||||++....++.++|||||||+++||+||+.|
T Consensus 464 iHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~P 541 (674)
T 3pfq_A 464 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541 (674)
T ss_dssp ECCCCCSTTEEECSSSCEEECCCTTCEECCCTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCS
T ss_pred EeccCChhhEEEcCCCcEEEeecceeeccccCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCC
Confidence 344344457888788888999999998654332 223456799999999999999999999999999999999999999
Q ss_pred CCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCH
Q 038019 716 SDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPM 777 (866)
Q Consensus 716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm 777 (866)
|......+ +.+ ... .+. ......... .+.++...|++.||++||++
T Consensus 542 f~~~~~~~---~~~---~i~-~~~------~~~p~~~s~---~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 542 FEGEDEDE---LFQ---SIM-EHN------VAYPKSMSK---EAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp SCCSSHHH---HHH---HHH-SSC------CCCCTTSCH---HHHHHHHHHSCSSSTTCTTC
T ss_pred CCCCCHHH---HHH---HHH-hCC------CCCCccCCH---HHHHHHHHHccCCHHHCCCC
Confidence 97643221 221 111 111 111111222 34455569999999999997
No 341
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.22 E-value=4.7e-12 Score=137.56 Aligned_cols=128 Identities=16% Similarity=0.154 Sum_probs=82.3
Q ss_pred ccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCC
Q 038019 637 VGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASS 716 (866)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~ 716 (866)
|......|++...+...++.|||.++.....+ .......||+.|+|||.+....++.++|||||||+++||++|+.|+
T Consensus 144 H~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf 221 (327)
T 3a62_A 144 YRDLKPENIMLNHQGHVKLTDFGLCKESIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221 (327)
T ss_dssp CCCCCTTTEEECTTSCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccCCHHHeEECCCCcEEEEeCCcccccccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCC
Confidence 33333447777677778899999987654332 2334457999999999999999999999999999999999999999
Q ss_pred CCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 038019 717 DKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRP-----PMSRVVA 782 (866)
Q Consensus 717 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RP-----sm~~V~~ 782 (866)
......+ ....+ .. +. ..+...... .+.++...|++.+|++|| ++.||++
T Consensus 222 ~~~~~~~---~~~~i---~~-~~------~~~p~~~~~---~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 222 TGENRKK---TIDKI---LK-CK------LNLPPYLTQ---EARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp CCSSHHH---HHHHH---HH-TC------CCCCTTSCH---HHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CCCCHHH---HHHHH---Hh-CC------CCCCCCCCH---HHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 7543221 11111 11 11 111111122 344556699999999999 5666654
No 342
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=1.3e-11 Score=135.23 Aligned_cols=104 Identities=16% Similarity=0.111 Sum_probs=87.8
Q ss_pred EEEccc-CcCCCCCcccCCCCCCCEEEccC-CCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCC
Q 038019 70 LRVYGL-NKKGVIPEELVTLQYLTVLKIDQ-NFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTN 147 (866)
Q Consensus 70 L~l~~~-~l~~~~p~~l~~l~~L~~L~Ls~-n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 147 (866)
++++++ +++. +|. |..+++|++|+|++ |.|++..+..|.+|++|++|+|++|+|++..|..|.+|++|++|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455565 5664 777 99999999999996 9999888888999999999999999999988889999999999999999
Q ss_pred CCCCCCchhhcCCCCccEEEeecCCCCCC
Q 038019 148 NFSGALPPELGNLAKLEQLYIDSCGAGGE 176 (866)
Q Consensus 148 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 176 (866)
+|++..+..+..++ |+.|+|.+|.+...
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 99976666666665 88888888888754
No 343
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.22 E-value=4.2e-12 Score=139.27 Aligned_cols=118 Identities=19% Similarity=0.201 Sum_probs=81.9
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
..|++...+...++.|||.++.....+ .......||+.|+|||.+....++.++|||||||+++||++|+.|+.....
T Consensus 149 p~NIll~~~g~vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~ 226 (353)
T 2i0e_A 149 LDNVMLDSEGHIKIADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 226 (353)
T ss_dssp GGGEEECTTSCEEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HHHEEEcCCCcEEEEeCCcccccccCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH
Confidence 347777777778899999988654322 123345799999999999999999999999999999999999999975432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPM 777 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm 777 (866)
.+ +.+.+ .. +. +........ .+.++...|++.+|++||++
T Consensus 227 ~~---~~~~i---~~-~~------~~~p~~~s~---~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 227 DE---LFQSI---ME-HN------VAYPKSMSK---EAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp HH---HHHHH---HH-CC------CCCCTTSCH---HHHHHHHHHTCSCTTSCTTC
T ss_pred HH---HHHHH---Hh-CC------CCCCCCCCH---HHHHHHHHHhhcCHHHcCCC
Confidence 21 22111 11 11 111111122 34456669999999999964
No 344
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.22 E-value=1.3e-12 Score=144.21 Aligned_cols=138 Identities=14% Similarity=0.140 Sum_probs=86.5
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCcee-EEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGP-VYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~-vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
..|++...+...++.|||.+...+...... ......||.+|+|||.+.. ..++.++|||||||+++||+||+.|+...
T Consensus 156 p~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 235 (364)
T 3qyz_A 156 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235 (364)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCC
Confidence 346776666677899999998776432111 1123478999999998764 45899999999999999999999999765
Q ss_pred chhhhhcHHHHHHHHhhcCC---c------------ccccCCcc---cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 038019 720 LDMEKIYLLEWAWNLHENNQ---S------------FGLVDPTL---TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVV 781 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~---~------------~~~~d~~l---~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~ 781 (866)
...+. ...+........ . .....+.- ..........+.++...|++.||++|||+.|++
T Consensus 236 ~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 312 (364)
T 3qyz_A 236 HYLDQ---LNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312 (364)
T ss_dssp SGGGH---HHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred ChHHH---HHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 43322 111111110000 0 00000000 000011123456677799999999999999997
Q ss_pred H
Q 038019 782 A 782 (866)
Q Consensus 782 ~ 782 (866)
+
T Consensus 313 ~ 313 (364)
T 3qyz_A 313 A 313 (364)
T ss_dssp T
T ss_pred c
Confidence 5
No 345
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.22 E-value=2e-12 Score=137.21 Aligned_cols=116 Identities=20% Similarity=0.198 Sum_probs=77.2
Q ss_pred HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHHH
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEWA 731 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~~ 731 (866)
..++.|||.+..+..+. .+....||..|+|||......++.++||||||++++||+||+.|+......+ ...
T Consensus 150 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~-- 221 (283)
T 3bhy_A 150 RIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE---TLT-- 221 (283)
T ss_dssp CEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---HHH--
T ss_pred ceEEEecccceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH---HHH--
Confidence 45789999998876543 2345578999999999998999999999999999999999999997543221 111
Q ss_pred HHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 732 WNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 732 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
. ...... ..++...... ...+.++...|++.+|++||++.|+++
T Consensus 222 -~-~~~~~~--~~~~~~~~~~---~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 222 -N-ISAVNY--DFDEEYFSNT---SELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp -H-HHTTCC--CCCHHHHTTC---CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -H-hHhccc--CCcchhcccC---CHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 1 111100 0111110111 223556677999999999999999986
No 346
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.22 E-value=3.4e-12 Score=142.28 Aligned_cols=79 Identities=16% Similarity=0.223 Sum_probs=59.8
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCcee-----EEEeecCCCCccCceeeec--CCCCchhHHHHHHHHHHHHHhcCC
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGP-----VYKVTANSYGYLAPEYAMR--GHLTEKADVFSFGVVALEIISGRA 714 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~-----vy~~~~gt~gY~aPE~~~~--~~~t~ksDVySfGvvLlEl~tg~~ 714 (866)
..|++...+...++.|||.+..+..++... ......||..|+|||.+.. ..++.++|||||||+++||+||+.
T Consensus 156 p~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~ 235 (389)
T 3gni_B 156 ASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV 235 (389)
T ss_dssp GGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred HHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCC
Confidence 346776666677888998876654333211 1112368999999999987 689999999999999999999999
Q ss_pred CCCCCc
Q 038019 715 SSDKSL 720 (866)
Q Consensus 715 p~~~~~ 720 (866)
|+....
T Consensus 236 pf~~~~ 241 (389)
T 3gni_B 236 PFKDMP 241 (389)
T ss_dssp TTTTCC
T ss_pred CCCCCC
Confidence 997543
No 347
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.22 E-value=2.5e-12 Score=148.75 Aligned_cols=127 Identities=18% Similarity=0.151 Sum_probs=87.9
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
...|++...+...++.|||.++.+..+.. ..+..||++|+|||++....++.++|||||||+++||+||+.|+....
T Consensus 313 KPeNILld~~g~vKL~DFGla~~~~~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~ 389 (576)
T 2acx_A 313 KPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389 (576)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECCTTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSS
T ss_pred chheEEEeCCCCeEEEecccceecccCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence 33477777777889999999998876542 345689999999999999899999999999999999999999997543
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRP-----PMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RP-----sm~~V~~ 782 (866)
.... .. .+....... .+........ .+.++...|++.||++|| ++.||.+
T Consensus 390 ~~~~--~~-~i~~~i~~~------~~~~p~~~s~---~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 390 KKIK--RE-EVERLVKEV------PEEYSERFSP---QARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp SCCC--HH-HHHHHHHHC------CCCCCTTSCH---HHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred cchh--HH-HHHHHhhcc------cccCCccCCH---HHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 2111 11 111111111 0111111122 344556699999999999 6777763
No 348
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.22 E-value=2.7e-12 Score=141.84 Aligned_cols=125 Identities=16% Similarity=0.105 Sum_probs=85.4
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
..|++...+...++.|||.++...... .......||+.|+|||.+.+..++.++|||||||+++||++|+.|+.....
T Consensus 167 p~NIll~~~g~ikL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~ 244 (373)
T 2r5t_A 167 PENILLDSQGHIVLTDFGLCKENIEHN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT 244 (373)
T ss_dssp GGGEEECTTSCEEECCCCBCGGGBCCC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH
T ss_pred HHHEEECCCCCEEEeeCccccccccCC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH
Confidence 347777777778899999988643322 123345799999999999999999999999999999999999999975432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAML 784 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L 784 (866)
.+ +.+ .... +.. .+......+ +.++...|++.||++||++.+.++.+
T Consensus 245 ~~---~~~---~i~~-~~~------~~~~~~~~~---~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 245 AE---MYD---NILN-KPL------QLKPNITNS---ARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp HH---HHH---HHHH-SCC------CCCSSSCHH---HHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred HH---HHH---HHHh-ccc------CCCCCCCHH---HHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 22 111 1111 111 111111223 44456699999999999986544443
No 349
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.22 E-value=3.1e-12 Score=136.66 Aligned_cols=122 Identities=21% Similarity=0.319 Sum_probs=86.1
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchh
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDM 722 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~ 722 (866)
.|++...+...++.|||.+..+...+. ......||.+|+|||......++.++||||||++++||+||+.|+......
T Consensus 144 ~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 221 (294)
T 2rku_A 144 GNLFLNEDLEVKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK 221 (294)
T ss_dssp GGEEECTTCCEEECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred HhEEEcCCCCEEEEeccCceecccCcc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 466666666778999999988764332 123356899999999999889999999999999999999999999754322
Q ss_pred hhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 723 EKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 723 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
+. .... ..+. ..+...... .+.++...|++.+|++||++.|+++
T Consensus 222 ~~------~~~~-~~~~------~~~~~~~~~---~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 222 ET------YLRI-KKNE------YSIPKHINP---VAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp HH------HHHH-HTTC------CCCCTTSCH---HHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred HH------HHHH-hhcc------CCCccccCH---HHHHHHHHHcccChhhCcCHHHHhh
Confidence 21 1111 1111 111111122 3445666999999999999999986
No 350
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.22 E-value=2.6e-12 Score=140.06 Aligned_cols=123 Identities=21% Similarity=0.311 Sum_probs=86.8
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
..|++...+...++.|||.+..+...+. ......||.+|+|||.+....++.++|||||||+++||+||+.|+.....
T Consensus 169 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 246 (335)
T 2owb_A 169 LGNLFLNEDLEVKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 246 (335)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred chhEEEcCCCCEEEeeccCceecccCcc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH
Confidence 3467766666788999999988764432 22345689999999999998999999999999999999999999975432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.+. ...... +. ..+...... .+.++...|++.||++||++.|+++
T Consensus 247 ~~~------~~~~~~-~~------~~~~~~~~~---~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 247 KET------YLRIKK-NE------YSIPKHINP---VAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp HHH------HHHHHH-TC------CCCCTTSCH---HHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred HHH------HHHHhc-CC------CCCCccCCH---HHHHHHHHHccCChhHCcCHHHHhc
Confidence 221 111111 11 111111122 3445666999999999999999986
No 351
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.21 E-value=4e-12 Score=142.09 Aligned_cols=130 Identities=16% Similarity=0.156 Sum_probs=87.4
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCC----CCchhHHHHHHHHHHHHHhcCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGH----LTEKADVFSFGVVALEIISGRASS 716 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~----~t~ksDVySfGvvLlEl~tg~~p~ 716 (866)
...|++...+...++.|||.++.+...+.. ......||++|||||++.... ++.++|||||||+++||+||+.|+
T Consensus 195 Kp~NILl~~~g~ikL~DFG~a~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf 273 (410)
T 3v8s_A 195 KPDNMLLDKSGHLKLADFGTCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273 (410)
T ss_dssp SGGGEEECTTSCEEECCCTTCEECCTTSEE-ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTT
T ss_pred CHHHeeECCCCCEEEeccceeEeeccCCcc-cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCC
Confidence 334777777778899999999988765431 223457999999999987654 889999999999999999999999
Q ss_pred CCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 038019 717 DKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMM--RPPMSRVVAM 783 (866)
Q Consensus 717 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~--RPsm~~V~~~ 783 (866)
......+ ....+..... ...-|..... .+++ .++...|++.+|.+ ||++.||.+.
T Consensus 274 ~~~~~~~---~~~~i~~~~~-----~~~~p~~~~~-s~~~---~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 274 YADSLVG---TYSKIMNHKN-----SLTFPDDNDI-SKEA---KNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCSSHHH---HHHHHHTHHH-----HCCCCTTCCC-CHHH---HHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred CCCChhh---HHHHHHhccc-----cccCCCcccc-cHHH---HHHHHHHccChhhhCCCCCHHHHhcC
Confidence 7543322 1111111000 0001111111 2333 34555899988988 9999999863
No 352
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.21 E-value=6.9e-13 Score=143.36 Aligned_cols=134 Identities=19% Similarity=0.166 Sum_probs=85.0
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCcee-------EEEeecCCCCccCceeeecC---CCCchhHHHHHHHHHHHHHh
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGP-------VYKVTANSYGYLAPEYAMRG---HLTEKADVFSFGVVALEIIS 711 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~-------vy~~~~gt~gY~aPE~~~~~---~~t~ksDVySfGvvLlEl~t 711 (866)
..|++...+...++.|||.++.......+. -+....||..|+|||.+... .++.++|||||||+++||+|
T Consensus 162 p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~ 241 (317)
T 2buj_A 162 PTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMF 241 (317)
T ss_dssp GGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHH
T ss_pred HHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHh
Confidence 346666666677889999876653210000 00122579999999988644 37899999999999999999
Q ss_pred cCCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCc
Q 038019 712 GRASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDI 788 (866)
Q Consensus 712 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~ 788 (866)
|+.|++...... ..+..... .. ..-|.....+ ..+.++...|++.||++||++.||++.|+...
T Consensus 242 g~~p~~~~~~~~-~~~~~~~~----~~----~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 242 GEGPYDMVFQKG-DSVALAVQ----NQ----LSIPQSPRHS----SALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp SSCTTHHHHHTT-SCHHHHHH----CC------CCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred CCCChhhhhccc-chhhHHhh----cc----CCCCccccCC----HHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 999985321111 11111111 10 0001111122 24556667999999999999999999999653
No 353
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.21 E-value=5.5e-12 Score=133.97 Aligned_cols=120 Identities=20% Similarity=0.211 Sum_probs=84.2
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchh
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDM 722 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~ 722 (866)
.|++...+...++.|||.+........ ....||..|+|||...+..++.++||||||++++||++|+.|++.....
T Consensus 143 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 218 (284)
T 2vgo_A 143 ENLLMGYKGELKIADFGWSVHAPSLRR----RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT 218 (284)
T ss_dssp GGEEECTTCCEEECCCTTCEECSSSCB----CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred HHEEEcCCCCEEEecccccccCccccc----ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh
Confidence 366665566678899998876654321 2346899999999999999999999999999999999999999754322
Q ss_pred hhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 723 EKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 723 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
+ . ..... .. +..+.....+ .+.++...|++.+|++||++.|+++
T Consensus 219 ~---~---~~~~~-~~------~~~~~~~~~~---~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 219 E---T---HRRIV-NV------DLKFPPFLSD---GSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp H---H---HHHHH-TT------CCCCCTTSCH---HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred H---H---HHHHh-cc------ccCCCCcCCH---HHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 2 1 11111 11 1112111122 3445666999999999999999975
No 354
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.21 E-value=2.9e-12 Score=141.52 Aligned_cols=125 Identities=19% Similarity=0.247 Sum_probs=85.5
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec------CCCCchhHHHHHHHHHHHHHhcCCCC
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR------GHLTEKADVFSFGVVALEIISGRASS 716 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~------~~~t~ksDVySfGvvLlEl~tg~~p~ 716 (866)
.|++...+...++.|||.+..+..+.. .....||++|+|||++.+ ..++.++|||||||+++||+||+.|+
T Consensus 229 ~NIl~~~~~~ikl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf 305 (365)
T 2y7j_A 229 ENILLDDNMQIRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305 (365)
T ss_dssp GGEEECTTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred HHEEECCCCCEEEEecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCC
Confidence 467777777788999999888765432 234579999999998863 36889999999999999999999999
Q ss_pred CCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 717 DKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 717 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
....... ....+ ..+.. ....|..... ...+.++...|++.||++||++.|+++
T Consensus 306 ~~~~~~~---~~~~i----~~~~~-~~~~~~~~~~----~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 306 WHRRQIL---MLRMI----MEGQY-QFSSPEWDDR----SSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp CCSSHHH---HHHHH----HHTCC-CCCHHHHSSS----CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCHHH---HHHHH----HhCCC-CCCCcccccC----CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 7543221 11111 11111 0000000111 123556677999999999999999986
No 355
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.21 E-value=2.5e-12 Score=137.67 Aligned_cols=136 Identities=16% Similarity=0.170 Sum_probs=85.6
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCC-CCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGH-LTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~-~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
.|++...+...++.|||.+..++... ..+....||..|+|||...+.. ++.++|||||||+++||+||+.|+.....
T Consensus 132 ~Nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 209 (299)
T 2r3i_A 132 QNLLINTEGAIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209 (299)
T ss_dssp GGEEECTTSCEEECSTTHHHHHCCCS--BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred HHeEEcCCCCEEECcchhhhhccCCc--cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH
Confidence 36666666677889999888775432 1223346899999999987765 79999999999999999999999976543
Q ss_pred hhhhcHHHHHHHHhhcCC--c---c--cccCCcccc--------cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 722 MEKIYLLEWAWNLHENNQ--S---F--GLVDPTLTE--------FNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~--~---~--~~~d~~l~~--------~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.+. +............ . . ...++.... ........+.++...|++.||++|||+.|+++
T Consensus 210 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 210 IDQ--LFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp HHH--HHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHH--HHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 221 1111111100000 0 0 001111100 00011234556777999999999999999976
No 356
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.21 E-value=1.1e-12 Score=143.36 Aligned_cols=127 Identities=20% Similarity=0.218 Sum_probs=85.6
Q ss_pred CCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeee----cCCCCchhHHHHHHHHHHHHHhcCCC
Q 038019 640 GSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAM----RGHLTEKADVFSFGVVALEIISGRAS 715 (866)
Q Consensus 640 ~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~----~~~~t~ksDVySfGvvLlEl~tg~~p 715 (866)
....|++...+...++.|||.++.+..+.. .....||.+|+|||++. ...++.++|||||||+++||+||+.|
T Consensus 180 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p 256 (340)
T 3an0_A 180 VKPSNVLINALGQVKMCDFGISGYLVDSVA---KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 256 (340)
T ss_dssp CCSTTEEECSTTCEEECCCSHHHHHSCHHH---HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCS
T ss_pred CCHHHEEECCCCCEEEeeCCCceecccccc---cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 334477777777788999999887754321 12236899999999964 44789999999999999999999999
Q ss_pred CCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 716 SDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 716 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
++...... .......... .+.+.. ......+.+++..|++.+|++||++.||++
T Consensus 257 ~~~~~~~~-----~~~~~~~~~~------~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 257 YDSWGTPF-----QQLKQVVEEP------SPQLPA--DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp SCCCSCHH-----HHHHHHHHSC------CCCCCG--GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CccccchH-----HHHHHHhcCC------CCCCCc--ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 97532211 1111111111 111110 011234556677999999999999999975
No 357
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.21 E-value=6.6e-12 Score=135.69 Aligned_cols=120 Identities=17% Similarity=0.169 Sum_probs=84.9
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
..|++...+...++.|||.++.+.... ....||+.|+|||.+....++.++|||||||+++||++|+.|+.....
T Consensus 134 p~NIll~~~g~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 208 (318)
T 1fot_A 134 PENILLDKNGHIKITDFGFAKYVPDVT-----YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT 208 (318)
T ss_dssp GGGEEECTTSCEEECCCSSCEECSSCB-----CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred hheEEEcCCCCEEEeecCcceecCCcc-----ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH
Confidence 346777667778899999998876432 234699999999999999999999999999999999999999975432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRP-----PMSRVVA 782 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RP-----sm~~V~~ 782 (866)
.+ .. ..... +. ........++ +.++...|++.+|++|| ++.||.+
T Consensus 209 ~~---~~---~~i~~-~~------~~~p~~~~~~---~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 209 MK---TY---EKILN-AE------LRFPPFFNED---VKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HH---HH---HHHHH-CC------CCCCTTSCHH---HHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HH---HH---HHHHh-CC------CCCCCCCCHH---HHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 21 11 11111 11 1111112233 44455699999999999 7888763
No 358
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.21 E-value=4.7e-12 Score=139.57 Aligned_cols=135 Identities=17% Similarity=0.105 Sum_probs=79.0
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
..|++...+...++.|||.+........ .....||..|+|||.+.. ..++.++|||||||+++||+||+.|+....
T Consensus 162 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 238 (362)
T 3pg1_A 162 PGNILLADNNDITICDFNLAREDTADAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238 (362)
T ss_dssp GGGEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred hHHEEEcCCCCEEEEecCcccccccccc---cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC
Confidence 3466666666788999999986654432 234468999999998876 779999999999999999999999998654
Q ss_pred hhhhhcHHHHHHHHhhc-------------------CCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 038019 721 DMEKIYLLEWAWNLHEN-------------------NQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVV 781 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~-------------------~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~ 781 (866)
..+. ...+...... .....................+.++...|++.||++|||+.|++
T Consensus 239 ~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 315 (362)
T 3pg1_A 239 FYNQ---LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL 315 (362)
T ss_dssp HHHH---HHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHH---HHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHH
Confidence 3221 1111111000 00000000000011111123456677799999999999999997
Q ss_pred H
Q 038019 782 A 782 (866)
Q Consensus 782 ~ 782 (866)
+
T Consensus 316 ~ 316 (362)
T 3pg1_A 316 R 316 (362)
T ss_dssp T
T ss_pred c
Confidence 5
No 359
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.20 E-value=3.5e-12 Score=137.57 Aligned_cols=125 Identities=18% Similarity=0.222 Sum_probs=85.3
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchh
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDM 722 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~ 722 (866)
.|++...+...++.|||.+..++.... ......||..|+|||......++.++||||||++++||+||+.|+......
T Consensus 154 ~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 231 (314)
T 3com_A 154 GNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM 231 (314)
T ss_dssp GGEEECTTCCEEECCCTTCEECBTTBS--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred HHEEECCCCCEEEeecccchhhhhhcc--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH
Confidence 366666666778999999887764321 122346899999999999999999999999999999999999998754322
Q ss_pred hhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 723 EKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 723 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.. .... .......... ..... ..+.++...|++.||++||++.++++
T Consensus 232 ~~------~~~~-~~~~~~~~~~---~~~~~---~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 232 RA------IFMI-PTNPPPTFRK---PELWS---DNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HH------HHHH-HHSCCCCCSS---GGGSC---HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HH------HHHH-hcCCCcccCC---cccCC---HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 11 1111 1111000100 11112 23455667999999999999999975
No 360
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.20 E-value=6.1e-12 Score=136.43 Aligned_cols=123 Identities=20% Similarity=0.235 Sum_probs=76.9
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeee-----cCCCCchhHHHHHHHHHHHHHhcCCCCC
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAM-----RGHLTEKADVFSFGVVALEIISGRASSD 717 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~-----~~~~t~ksDVySfGvvLlEl~tg~~p~~ 717 (866)
.|++...+...++.|||.+..+.... .......||..|+|||.+. ...++.++|||||||+++||+||+.|+.
T Consensus 158 ~NIl~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 235 (326)
T 2x7f_A 158 QNVLLTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC 235 (326)
T ss_dssp GGEEECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTT
T ss_pred HHEEEcCCCCEEEeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 36666666677899999988775421 1123346899999999986 5678999999999999999999999987
Q ss_pred CCchhhhhcHHHHHHHHhhcCCcccccCCcc-cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 718 KSLDMEKIYLLEWAWNLHENNQSFGLVDPTL-TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 718 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
....... .. .... .. .+.+ .....+ .+.++...|++.+|++||++.|+++
T Consensus 236 ~~~~~~~---~~---~~~~-~~-----~~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 236 DMHPMRA---LF---LIPR-NP-----APRLKSKKWSK---KFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp TSCHHHH---HH---HHHH-SC-----CCCCSCSCSCH---HHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCcHHHH---HH---Hhhc-Cc-----cccCCccccCH---HHHHHHHHHhccChhhCCCHHHHhh
Confidence 5433221 11 1111 11 1111 111122 3445666999999999999999986
No 361
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.20 E-value=7.3e-12 Score=134.45 Aligned_cols=119 Identities=16% Similarity=0.220 Sum_probs=81.7
Q ss_pred HHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcH
Q 038019 648 YAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYL 727 (866)
Q Consensus 648 ~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l 727 (866)
..+...++.|||.+.....+.. ....||.+|+|||.+....++.++||||||++++||+||+.|+....... +
T Consensus 143 ~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~ 215 (304)
T 2jam_A 143 EENSKIMITDFGLSKMEQNGIM----STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK---L 215 (304)
T ss_dssp STTCCEEBCSCSTTCCCCCBTT----HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH---H
T ss_pred CCCCCEEEccCCcceecCCCcc----ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---H
Confidence 3445567899999887654432 22368999999999999999999999999999999999999987543221 2
Q ss_pred HHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 728 LEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 728 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.+. +.++.. ....+.....+ ..+.++...|++.||++||++.|+++
T Consensus 216 ~~~----i~~~~~-~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 216 FEK----IKEGYY-EFESPFWDDIS----ESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHH----HHHCCC-CCCTTTTTTSC----HHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHH----HHcCCC-CCCccccccCC----HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 211 111111 11111111122 23555667999999999999999985
No 362
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.20 E-value=2.8e-12 Score=140.99 Aligned_cols=131 Identities=15% Similarity=0.152 Sum_probs=85.1
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec--CCCCchhHHHHHHHHHHHHHhcCCCCCC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR--GHLTEKADVFSFGVVALEIISGRASSDK 718 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~--~~~t~ksDVySfGvvLlEl~tg~~p~~~ 718 (866)
...|++...+...++.|||.++.+....... .....||++|+|||++.+ ..++.++|||||||+++||+||+.|+..
T Consensus 186 kp~NIll~~~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~ 264 (355)
T 1vzo_A 186 KLENILLDSNGHVVLTDFGLSKEFVADETER-AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV 264 (355)
T ss_dssp CGGGEEECTTSCEEESCSSEEEECCGGGGGG-GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSC
T ss_pred CHHHEEECCCCcEEEeeCCCCeecccCCCCc-ccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 3347777777778899999988765432211 123468999999999875 4578999999999999999999999875
Q ss_pred CchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHH
Q 038019 719 SLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRP-----PMSRVVAML 784 (866)
Q Consensus 719 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RP-----sm~~V~~~L 784 (866)
..... ............ .+.... .....+.+++.+|++.||++|| ++.|+++..
T Consensus 265 ~~~~~--~~~~~~~~~~~~-------~~~~~~---~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 265 DGEKN--SQAEISRRILKS-------EPPYPQ---EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp TTSCC--CHHHHHHHHHHC-------CCCCCT---TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred CCccc--hHHHHHHHHhcc-------CCCCCc---ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 33211 122222222111 111111 1112345566799999999999 888887644
No 363
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.20 E-value=7.9e-12 Score=132.04 Aligned_cols=121 Identities=20% Similarity=0.313 Sum_probs=76.9
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCC-CchhHHHHHHHHHHHHHhcCCCCCCCch
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHL-TEKADVFSFGVVALEIISGRASSDKSLD 721 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~-t~ksDVySfGvvLlEl~tg~~p~~~~~~ 721 (866)
.|++...+...++.|||.+..+..+.. .....||..|+|||...+..+ +.++||||||++++||+||+.|++....
T Consensus 140 ~Nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 216 (276)
T 2h6d_A 140 ENVLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216 (276)
T ss_dssp GGEEECTTSCEEECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred hhEEECCCCCEEEeecccccccCCCcc---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH
Confidence 366666666778999999988876532 334568999999999887665 6899999999999999999999975432
Q ss_pred hhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 722 MEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 722 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.. +.+. ...+.. .+..... ..+.++...|++.||++||++.||++
T Consensus 217 ~~---~~~~----~~~~~~------~~~~~~~---~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 217 PT---LFKK----IRGGVF------YIPEYLN---RSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp HH---HHHH----HHHCCC------CCCTTSC---HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HH---HHHH----hhcCcc------cCchhcC---HHHHHHHHHHccCChhhCCCHHHHHh
Confidence 21 1111 111110 1111112 23455667999999999999999986
No 364
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.19 E-value=2.7e-12 Score=139.53 Aligned_cols=134 Identities=15% Similarity=0.101 Sum_probs=85.0
Q ss_pred CcccCHHHH-HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 643 PNIFGYAEL-RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 643 ~~~~~~~~~-~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
.|++...+. ..++.|||.++.+..+.. +....||..|+|||.+.. ..++.++|||||||+++||+||+.|+....
T Consensus 159 ~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~ 235 (330)
T 3nsz_A 159 HNVMIDHEHRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 235 (330)
T ss_dssp GGEEEETTTTEEEECCCTTCEECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred HHEEEcCCCCEEEEEeCCCceEcCCCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 366655444 578999999988765432 334568999999999876 679999999999999999999999986433
Q ss_pred hhhhhcHHHHHH--------HHhhcCCcccccCCcc----------------c-ccCHHHHHHHHHHHHHccCCCCCCCC
Q 038019 721 DMEKIYLLEWAW--------NLHENNQSFGLVDPTL----------------T-EFNDKEALRVIGVALLCTQTSPMMRP 775 (866)
Q Consensus 721 ~~~~~~l~~~~~--------~~~~~~~~~~~~d~~l----------------~-~~~~~~~~~~~~la~~C~~~~p~~RP 775 (866)
... ..+..... ........ ..++.. . .........+.++...|++.||++||
T Consensus 236 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 312 (330)
T 3nsz_A 236 DNY-DQLVRIAKVLGTEDLYDYIDKYNI--ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRL 312 (330)
T ss_dssp SHH-HHHHHHHHHHCHHHHHHHHHHTTC--CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSC
T ss_pred chH-HHHHHHHHhcCCchhhhHHHHhcc--ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCC
Confidence 211 11111110 00110000 011100 0 00001123456667799999999999
Q ss_pred CHHHHHH
Q 038019 776 PMSRVVA 782 (866)
Q Consensus 776 sm~~V~~ 782 (866)
|+.|+++
T Consensus 313 ta~e~l~ 319 (330)
T 3nsz_A 313 TAREAME 319 (330)
T ss_dssp CHHHHHT
T ss_pred CHHHHhc
Confidence 9999975
No 365
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.19 E-value=1.1e-11 Score=136.48 Aligned_cols=126 Identities=17% Similarity=0.142 Sum_probs=72.6
Q ss_pred cccCHHHHH--HHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCch-hHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 644 NIFGYAELR--SATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEK-ADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 644 ~~~~~~~~~--~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~k-sDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
|++...+.. .++.|||.++...... ......||+.|+|||.+.+..++.+ +|||||||+++||+||+.|+....
T Consensus 146 Nill~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 222 (361)
T 3uc3_A 146 NTLLDGSPAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222 (361)
T ss_dssp GEEECSSSSCCEEECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC---
T ss_pred HEEEcCCCCceEEEeecCccccccccC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCc
Confidence 555443332 6789999887543322 2334579999999999988888766 899999999999999999997543
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
... ............. . .. |.-.... ..+.++..+|++.+|++|||+.|+++
T Consensus 223 ~~~--~~~~~~~~~~~~~-~-~~--~~~~~~s----~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 223 EPR--DYRKTIQRILSVK-Y-SI--PDDIRIS----PECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp -CC--CHHHHHHHHHTTC-C-CC--CTTSCCC----HHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cHH--HHHHHHHHHhcCC-C-CC--CCcCCCC----HHHHHHHHHHccCChhHCcCHHHHHh
Confidence 221 2222222222111 0 00 0000111 23455667999999999999999985
No 366
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.19 E-value=5.6e-12 Score=141.01 Aligned_cols=129 Identities=21% Similarity=0.158 Sum_probs=84.0
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeee-------cCCCCchhHHHHHHHHHHHHHhcC
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAM-------RGHLTEKADVFSFGVVALEIISGR 713 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~-------~~~~t~ksDVySfGvvLlEl~tg~ 713 (866)
...|++.+.+...++.|||.++.+...+. .......||++|||||++. .+.++.++|||||||+++||+||+
T Consensus 189 Kp~NILld~~g~vkL~DFGla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~ 267 (412)
T 2vd5_A 189 KPDNILLDRCGHIRLADFGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267 (412)
T ss_dssp SGGGEEECTTSCEEECCCTTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSS
T ss_pred CHHHeeecCCCCEEEeechhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCC
Confidence 33477777777889999999988865432 1122347999999999987 467899999999999999999999
Q ss_pred CCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCC---CCHHHHHH
Q 038019 714 ASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMR---PPMSRVVA 782 (866)
Q Consensus 714 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~R---Psm~~V~~ 782 (866)
.|+......+. ...+..... ...-|........+ +.++...|++ +|++| |++.||.+
T Consensus 268 ~Pf~~~~~~~~---~~~i~~~~~-----~~~~p~~~~~~s~~---~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 268 TPFYADSTAET---YGKIVHYKE-----HLSLPLVDEGVPEE---ARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp CTTCCSSHHHH---HHHHHTHHH-----HCCCC----CCCHH---HHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred CCCCCCCHHHH---HHHHHhccc-----CcCCCccccCCCHH---HHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 99976443221 111111000 01111111112233 3445558998 89888 68888864
No 367
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.19 E-value=4.2e-12 Score=146.50 Aligned_cols=124 Identities=19% Similarity=0.145 Sum_probs=85.0
Q ss_pred CCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 641 SKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 641 ~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
...|++...+...++.|||.++.+..+.. ......||+.|||||.+.+..++.++|||||||+++||+||+.||....
T Consensus 316 KP~NILl~~~g~vkL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~ 393 (543)
T 3c4z_A 316 KPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393 (543)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECCTTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred ChHHEEEeCCCCEEEeecceeeeccCCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence 33477777777788999999998876542 2234579999999999999999999999999999999999999997543
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMS 778 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~ 778 (866)
... ...+....... +. ......... .+.++...|++.+|++||++.
T Consensus 394 ~~~--~~~~~~~~i~~-~~------~~~p~~~s~---~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 394 EKV--ENKELKQRVLE-QA------VTYPDKFSP---ASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp CCC--CHHHHHHHHHH-CC------CCCCTTSCH---HHHHHHHHHSCSSGGGSCCCB
T ss_pred cch--hHHHHHHHHhh-cc------cCCCcccCH---HHHHHHHHhccCCHhHCCCCc
Confidence 211 11111111111 11 111111122 344456699999999999864
No 368
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.19 E-value=7.4e-12 Score=135.17 Aligned_cols=125 Identities=19% Similarity=0.212 Sum_probs=74.8
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeee-----cCCCCchhHHHHHHHHHHHHHhcCCCCC
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAM-----RGHLTEKADVFSFGVVALEIISGRASSD 717 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~-----~~~~t~ksDVySfGvvLlEl~tg~~p~~ 717 (866)
.|++...+...++.|||.+..+..+. ......||..|+|||.+. ...++.++|||||||+++||+||+.|+.
T Consensus 154 ~Nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 230 (318)
T 2dyl_A 154 SNILLDERGQIKLCDFGISGRLVDDK---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK 230 (318)
T ss_dssp GGEEECTTSCEEECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred HHEEECCCCCEEEEECCCchhccCCc---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCC
Confidence 46666666678899999988775532 233456899999999984 5678999999999999999999999987
Q ss_pred CCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 718 KSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 718 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
...... ... ....... ... .+.....+ ..+.+++..|++.||.+||++.||++
T Consensus 231 ~~~~~~--~~~---~~~~~~~-~~~--~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 231 NCKTDF--EVL---TKVLQEE-PPL--LPGHMGFS----GDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp TCCSHH--HHH---HHHHHSC-CCC--CCSSSCCC----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCccH--HHH---HHHhccC-CCC--CCccCCCC----HHHHHHHHHHccCChhHCcCHHHHhh
Confidence 532211 111 1111111 000 01001112 23455666999999999999999875
No 369
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.18 E-value=4.7e-12 Score=133.89 Aligned_cols=121 Identities=15% Similarity=0.165 Sum_probs=82.1
Q ss_pred cccC---HHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 644 NIFG---YAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 644 ~~~~---~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
|++. ..+...++.|||.+..+..+.. .....||.+|+|||... +.++.++||||||++++||+||+.|+....
T Consensus 136 Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 211 (277)
T 3f3z_A 136 NFLFLTDSPDSPLKLIDFGLAARFKPGKM---MRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPT 211 (277)
T ss_dssp GEEESSSSTTCCEEECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHT-TCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEEecCCCCCcEEEEecccceeccCccc---hhccCCCCCccChHHhc-ccCCchhhehhHHHHHHHHHHCCCCCCCCC
Confidence 5554 4455668899999987765432 23456899999999875 459999999999999999999999997644
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcc--cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTL--TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l--~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+ ... ....+.. ..|.. ... ...+.++...|++.+|++||++.|+++
T Consensus 212 ~~~---~~~----~~~~~~~---~~~~~~~~~~----~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 212 DSE---VML----KIREGTF---TFPEKDWLNV----SPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHH---HHH----HHHHCCC---CCCHHHHTTS----CHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHH---HHH----HHHhCCC---CCCchhhhcC----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 322 111 1111111 00100 011 234556667999999999999999874
No 370
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.18 E-value=1e-12 Score=141.94 Aligned_cols=125 Identities=14% Similarity=0.149 Sum_probs=73.4
Q ss_pred HHhcCCccccccCCCCcee-----EEEeecCCCCccCceeeec-----CCCCchhHHHHHHHHHHHHHhcCCCCCCCchh
Q 038019 653 SATKDFNRSNKLGEGGYGP-----VYKVTANSYGYLAPEYAMR-----GHLTEKADVFSFGVVALEIISGRASSDKSLDM 722 (866)
Q Consensus 653 ~~~~dF~~~~~lg~g~~g~-----vy~~~~gt~gY~aPE~~~~-----~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~ 722 (866)
.++.|||.+..+...+... ......||..|+|||.+.. ..++.++|||||||+++||+||+.|+......
T Consensus 153 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 232 (316)
T 2ac3_A 153 VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGS 232 (316)
T ss_dssp EEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCS
T ss_pred eEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccc
Confidence 5788999888765432211 1223469999999999875 56899999999999999999999999754321
Q ss_pred hhhc--------HHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 723 EKIY--------LLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 723 ~~~~--------l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
+... ...........+.. ...++..... ...+.++..+|++.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~----~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 233 DCGWDRGEACPACQNMLFESIQEGKY-EFPDKDWAHI----SCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CSCC----CCHHHHHHHHHHHHHCCC-CCCHHHHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cccccccccchhHHHHHHHHHhccCc-ccCchhcccC----CHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 1000 00011111111111 0000000011 124556777999999999999999986
No 371
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.18 E-value=1.2e-11 Score=137.49 Aligned_cols=134 Identities=19% Similarity=0.171 Sum_probs=86.0
Q ss_pred CcccCH-HHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecC-CCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 643 PNIFGY-AELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRG-HLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 643 ~~~~~~-~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~-~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
.|++.. .+...++.|||.++.+..+.... ...||..|+|||.+.+. .++.++|||||||+++||++|+.|+....
T Consensus 170 ~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 246 (383)
T 3eb0_A 170 QNLLVNSKDNTLKLCDFGSAKKLIPSEPSV---AYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGET 246 (383)
T ss_dssp GGEEEETTTTEEEECCCTTCEECCTTSCCC---CCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHEEEcCCCCcEEEEECCCCcccCCCCCCc---CcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCC
Confidence 366654 45667899999998876554322 33579999999988764 59999999999999999999999998654
Q ss_pred hhhhhcHHHHHHHHhhc----------CCcccccCCcccc------cCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHEN----------NQSFGLVDPTLTE------FNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~----------~~~~~~~d~~l~~------~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+. +...+. .... ....+..-|.+.. .+......+.++...|++.+|++|||+.|+++
T Consensus 247 ~~~~--~~~i~~-~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 247 SIDQ--LVRIIQ-IMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp HHHH--HHHHHH-HHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hHHH--HHHHHH-HhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 3322 111111 1000 0001111111100 11111234566777999999999999999874
No 372
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.18 E-value=4.5e-12 Score=137.27 Aligned_cols=114 Identities=17% Similarity=0.247 Sum_probs=81.9
Q ss_pred CcccCH-HHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCC-CchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 643 PNIFGY-AELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHL-TEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 643 ~~~~~~-~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~-t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
.|++.. .+...++.|||.++.+..... ....||.+|+|||++....+ +.++|||||||+++||+||+.|+....
T Consensus 178 ~NIll~~~~~~~kL~Dfg~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 253 (320)
T 3a99_A 178 ENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 253 (320)
T ss_dssp GGEEEETTTTEEEECCCTTCEECCSSCB----CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH
T ss_pred HHEEEeCCCCCEEEeeCccccccccccc----cCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh
Confidence 366665 456778999999988875433 34568999999999887766 688999999999999999999986421
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
. . .. +.. ...+ ..+ ..+.+++.+|++.||++||++.||++
T Consensus 254 ~-----~-------~~-~~~--~~~~---~~~----~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 254 E-----I-------IR-GQV--FFRQ---RVS----SECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp H-----H-------HH-CCC--CCSS---CCC----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred h-----h-------hc-ccc--cccc---cCC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0 00 100 0111 112 23455667999999999999999976
No 373
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.18 E-value=7.3e-12 Score=141.59 Aligned_cols=77 Identities=17% Similarity=0.175 Sum_probs=55.0
Q ss_pred CCCCcccCHHHHHHHhcCCccccccCCCCce--------------------eEEEeecCCCCccCceee-ecCCCCchhH
Q 038019 640 GSKPNIFGYAELRSATKDFNRSNKLGEGGYG--------------------PVYKVTANSYGYLAPEYA-MRGHLTEKAD 698 (866)
Q Consensus 640 ~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g--------------------~vy~~~~gt~gY~aPE~~-~~~~~t~ksD 698 (866)
....|++...+...++.|||.++.+...... ......+||..|+|||.+ ....++.++|
T Consensus 155 lkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~D 234 (432)
T 3n9x_A 155 LKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSID 234 (432)
T ss_dssp CCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHH
T ss_pred CCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccc
Confidence 3334777777777889999999988654322 223456799999999986 5667999999
Q ss_pred HHHHHHHHHHHHhcCCCC
Q 038019 699 VFSFGVVALEIISGRASS 716 (866)
Q Consensus 699 VySfGvvLlEl~tg~~p~ 716 (866)
|||+||+++||+||..|+
T Consensus 235 iwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 235 IWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp HHHHHHHHHHHHTTCTTT
T ss_pred cchHHHHHHHHHhccccc
Confidence 999999999999865544
No 374
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.18 E-value=5.5e-12 Score=138.98 Aligned_cols=74 Identities=22% Similarity=0.278 Sum_probs=58.9
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
.|++...+...++.|||.+..+.... .....||.+|+|||.+.+..++.++|||||||+++||+||+.|+....
T Consensus 161 ~Nil~~~~~~~kl~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 234 (360)
T 3eqc_A 161 SNILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 234 (360)
T ss_dssp GGEEECTTCCEEECCCCCCHHHHHHC--------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred HHEEECCCCCEEEEECCCCccccccc----ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 36666666677899999887664322 233468999999999999999999999999999999999999997644
No 375
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=5.3e-13 Score=147.25 Aligned_cols=134 Identities=11% Similarity=0.062 Sum_probs=62.6
Q ss_pred CCCCEEEccCCCCCCCCCcccc-----CCCCcCEEeccCCcCCCCCCccc-cCCCCCCEeeccCCCCCCCCchhh-----
Q 038019 89 QYLTVLKIDQNFFTGPLPSFIG-----NLSRLMFLSFSHNDFSGPVPREL-GNLKELTVLAFGTNNFSGALPPEL----- 157 (866)
Q Consensus 89 ~~L~~L~Ls~n~l~~~~p~~l~-----~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~~l----- 157 (866)
+.|+.|+|++|.++......|. +.++|++|+|++|.++......+ ..+++|++|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 4566666666666543222222 22466666666666643222222 223455666666665543322222
Q ss_pred cCCCCccEEEeecCCCCCC----ChhhhhcCcCCCEEEecCCCCCCC----CcccccCCCCCCeEEccCCCCC
Q 038019 158 GNLAKLEQLYIDSCGAGGE----IPSTFAKLRNMQTLWASDNPFTGK----IPDFIGNWTKLKSLRFQGNSFQ 222 (866)
Q Consensus 158 ~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~ 222 (866)
...++|++|+|++|.++.. ++..+..+++|++|+|++|.+++. ++..+...++|+.|+|++|.++
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 1244555555555555431 223334445555555555554421 1233333444444444444443
No 376
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.17 E-value=8.5e-12 Score=136.06 Aligned_cols=119 Identities=16% Similarity=0.192 Sum_probs=59.4
Q ss_pred HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHHH
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEWA 731 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~~ 731 (866)
..++.|||.++...... .....||.+|+|||++....++.++||||||++++||+||+.|+....... .....
T Consensus 169 ~~kl~Dfg~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~ 241 (336)
T 3fhr_A 169 VLKLTDFGFAKETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQA---ISPGM 241 (336)
T ss_dssp CEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred eEEEeccccceeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchh---hhhhH
Confidence 36789999988776432 234568999999999999999999999999999999999999986533211 10000
Q ss_pred HHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 732 WNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 732 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
......+.. ....+..... ...+.++...|++.||++|||+.|+++
T Consensus 242 ~~~~~~~~~-~~~~~~~~~~----~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 242 KRRIRLGQY-GFPNPEWSEV----SEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ----------CCCTTTSTTC----CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHhhhcccc-ccCchhhccC----CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 010000000 0111111112 223455667999999999999999987
No 377
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.16 E-value=2e-12 Score=139.75 Aligned_cols=137 Identities=14% Similarity=0.159 Sum_probs=82.5
Q ss_pred CcccCH-HHHHHHhcCCccccccCCCCc-eeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 643 PNIFGY-AELRSATKDFNRSNKLGEGGY-GPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 643 ~~~~~~-~~~~~~~~dF~~~~~lg~g~~-g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
.|++.. ++...++.|||.++.++.... ........+|..|+|||.... ..++.++|||||||+++||+||+.|+...
T Consensus 149 ~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 228 (320)
T 2i6l_A 149 ANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA 228 (320)
T ss_dssp GGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred HHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCC
Confidence 366654 455678999999988753211 111123357899999998765 78999999999999999999999999865
Q ss_pred chhhhhcHHHHHHHHhhc----------CCcc-----cccCCcc--cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 720 LDMEKIYLLEWAWNLHEN----------NQSF-----GLVDPTL--TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~----------~~~~-----~~~d~~l--~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
...+. ...+...... .... ....+.. ..........+.++...|++.||++||++.|+++
T Consensus 229 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 229 HELEQ---MQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp SHHHH---HHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CHHHH---HHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 43221 1111110000 0000 0000100 0000111234566777999999999999999975
No 378
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.16 E-value=5.6e-12 Score=133.86 Aligned_cols=107 Identities=12% Similarity=0.166 Sum_probs=73.9
Q ss_pred HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecC-CCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHH
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRG-HLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEW 730 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~-~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~ 730 (866)
..++.|||.+..++.... ..||..|+|||.+... .++.++|||||||+++||++|+.+..... ..
T Consensus 172 ~~kl~Dfg~~~~~~~~~~------~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------~~-- 237 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQV------EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------QW-- 237 (289)
T ss_dssp CEEECCCTTCEETTCSCC------CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------HH--
T ss_pred EEEEcccccccccCCccc------cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------HH--
Confidence 357889998887765432 3589999999998765 66789999999999999999987754221 11
Q ss_pred HHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 731 AWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 731 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.....+.. +.+.....+ .+.++...|++.||++||++.|+++
T Consensus 238 --~~~~~~~~-----~~~~~~~~~---~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 238 --HEIRQGRL-----PRIPQVLSQ---EFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp --HHHHTTCC-----CCCSSCCCH---HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHHcCCC-----CCCCcccCH---HHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11112211 222211222 3455666999999999999999875
No 379
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.16 E-value=1.5e-11 Score=141.20 Aligned_cols=117 Identities=20% Similarity=0.240 Sum_probs=79.1
Q ss_pred HHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHH
Q 038019 650 ELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLE 729 (866)
Q Consensus 650 ~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~ 729 (866)
+...++.|||.++.+..+. ......||++|+|||.+. +.++.++||||+||+++||+||+.|+......+ +..
T Consensus 160 ~~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~ 232 (486)
T 3mwu_A 160 DCDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYD---ILK 232 (486)
T ss_dssp TCCEEECSCSCTTTBCCC-------CCTTGGGGCCGGGGG-SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH
T ss_pred CCCEEEEECCcCeECCCCC---ccCCCcCCCCCCCHHHhC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHH
Confidence 3446789999998876542 344567999999999886 469999999999999999999999997543322 221
Q ss_pred HHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 730 WAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 730 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.+ ..+... .-.|...... + .+.++...|++.+|++|||+.|+++
T Consensus 233 ~i----~~~~~~-~~~~~~~~~s-~---~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 233 RV----ETGKYA-FDLPQWRTIS-D---DAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp HH----HHTCCC-SCSGGGGGSC-H---HHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HH----HhCCCC-CCCcccCCCC-H---HHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11 111110 0011111122 2 3445666999999999999999986
No 380
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.15 E-value=5.6e-11 Score=130.13 Aligned_cols=103 Identities=19% Similarity=0.182 Sum_probs=64.0
Q ss_pred EEEccCC-CCCCCCCccccCCCCcCEEeccC-CcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeec
Q 038019 93 VLKIDQN-FFTGPLPSFIGNLSRLMFLSFSH-NDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDS 170 (866)
Q Consensus 93 ~L~Ls~n-~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 170 (866)
.++++++ .|+ .+|. |..+++|++|+|++ |.|++..+..|.+|++|++|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3566666 666 3565 77777777777774 777666666666666777777766666666666666666666666666
Q ss_pred CCCCCCChhhhhcCcCCCEEEecCCCCC
Q 038019 171 CGAGGEIPSTFAKLRNMQTLWASDNPFT 198 (866)
Q Consensus 171 n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 198 (866)
|+|++..+..|..++ |+.|+|.+|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 666554444444443 555555555544
No 381
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.14 E-value=8.5e-12 Score=136.66 Aligned_cols=131 Identities=16% Similarity=0.193 Sum_probs=86.7
Q ss_pred CCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecC-CCCc-hhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 642 KPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRG-HLTE-KADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 642 ~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~-~~t~-ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
..|++...+...++.|||.+..+..+ ......||..|+|||..... .++. ++||||||++++||+||+.|+...
T Consensus 180 p~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 255 (348)
T 2pml_X 180 PSNILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255 (348)
T ss_dssp GGGEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hHhEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 34677666677889999999887654 23445789999999999877 6666 999999999999999999999754
Q ss_pred chhhhhcHHHHHHHHhhcCCccc------ccCCccc----ccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 720 LDMEKIYLLEWAWNLHENNQSFG------LVDPTLT----EFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~~~------~~d~~l~----~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
... ..+.+.+ ..+...- ...+... .........+.++...|++.||++||++.|+++
T Consensus 256 ~~~--~~~~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 256 ISL--VELFNNI----RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp SCS--HHHHHHH----TSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CcH--HHHHHHH----hccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 331 1122221 1111100 0000000 000111234566777999999999999999976
No 382
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.14 E-value=1.1e-11 Score=142.63 Aligned_cols=115 Identities=20% Similarity=0.227 Sum_probs=79.0
Q ss_pred HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHHH
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEWA 731 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~~ 731 (866)
..++.|||.+..+..+. ......||+.|+|||.+. +.++.++||||+||+++||++|+.|+......+ +...+
T Consensus 177 ~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~i 249 (494)
T 3lij_A 177 LIKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE---ILRKV 249 (494)
T ss_dssp CEEECCCTTCEECBTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHH
T ss_pred cEEEEECCCCeECCCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHH
Confidence 35789999998876543 233457999999999875 679999999999999999999999997644322 22111
Q ss_pred HHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 732 WNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 732 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+.. ....+...... + .+.++...|++.+|.+|||+.|+++
T Consensus 250 ----~~~~~-~~~~~~~~~~s-~---~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 250 ----EKGKY-TFDSPEWKNVS-E---GAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp ----HHTCC-CCCSGGGTTSC-H---HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----HhCCC-CCCchhcccCC-H---HHHHHHHHHCCCChhhCccHHHHhc
Confidence 11111 01111111122 2 3445666999999999999999874
No 383
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.13 E-value=4.7e-12 Score=137.17 Aligned_cols=116 Identities=18% Similarity=0.232 Sum_probs=78.8
Q ss_pred HHhcCCccccccCCCCceeEEEeecCCCCccCceeee---cCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHH
Q 038019 653 SATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAM---RGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLE 729 (866)
Q Consensus 653 ~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~---~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~ 729 (866)
.++.|||.++.++.... .....||..|+|||.+. ...++.++|||||||+++||+||+.|+...... ..+..
T Consensus 156 ~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~ 230 (322)
T 2ycf_A 156 IKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSLKD 230 (322)
T ss_dssp EEECCCTTCEECCCCHH---HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS--SCHHH
T ss_pred EEEccCccceecccccc---cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH--HHHHH
Confidence 67889999988765432 22346899999999874 567899999999999999999999998754321 12222
Q ss_pred HHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 730 WAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 730 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.+.. +... ..+.... .....+.+++..|++.||++||++.|+++
T Consensus 231 ~~~~----~~~~--~~~~~~~---~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 231 QITS----GKYN--FIPEVWA---EVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHH----TCCC--CCHHHHT---TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHh----Cccc--cCchhhh---hcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 2211 1110 0111100 11234556777999999999999999874
No 384
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.13 E-value=5.3e-12 Score=135.30 Aligned_cols=125 Identities=17% Similarity=0.167 Sum_probs=78.4
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeee-----cCCCCchhHHHHHHHHHHHHHhcCCCCC
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAM-----RGHLTEKADVFSFGVVALEIISGRASSD 717 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~-----~~~~t~ksDVySfGvvLlEl~tg~~p~~ 717 (866)
.|++...+...++.|||.+....... .......||..|+|||++. ...++.++||||||++++||+||+.|+.
T Consensus 146 ~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 223 (302)
T 2j7t_A 146 GNVLMTLEGDIRLADFGVSAKNLKTL--QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH 223 (302)
T ss_dssp GGEEECTTSCEEECCCHHHHHHHHHH--HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred HHEEECCCCCEEEEECCCCccccccc--cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCc
Confidence 36666555567788898765432111 1122346899999999883 6778999999999999999999999987
Q ss_pred CCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 718 KSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 718 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
...... ......... ...... ..... ..+.++...|++.+|++|||+.|+++
T Consensus 224 ~~~~~~------~~~~~~~~~-~~~~~~---~~~~~---~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 224 ELNPMR------VLLKIAKSD-PPTLLT---PSKWS---VEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp TSCHHH------HHHHHHHSC-CCCCSS---GGGSC---HHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred cCCHHH------HHHHHhccC-CcccCC---ccccC---HHHHHHHHHHcccChhhCCCHHHHhc
Confidence 543321 111111111 101100 11111 23455667999999999999999864
No 385
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.13 E-value=2.2e-11 Score=131.16 Aligned_cols=114 Identities=18% Similarity=0.276 Sum_probs=81.4
Q ss_pred CcccCH-HHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCC-chhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 643 PNIFGY-AELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLT-EKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 643 ~~~~~~-~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t-~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
.|++.. .+...++.|||.+..+....+ ....||.+|+|||++....+. .++||||||++++||+||+.|+....
T Consensus 168 ~Nil~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 243 (312)
T 2iwi_A 168 ENILIDLRRGCAKLIDFGSGALLHDEPY----TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ 243 (312)
T ss_dssp GGEEEETTTTEEEECCCSSCEECCSSCB----CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH
T ss_pred hhEEEeCCCCeEEEEEcchhhhcccCcc----cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH
Confidence 356655 556678999999988876543 345689999999998877664 59999999999999999999986321
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.. .. .. ..+.... ...+.+++..|++.+|++||++.||++
T Consensus 244 -----~~-------~~-~~------~~~~~~~---~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 244 -----EI-------LE-AE------LHFPAHV---SPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -----HH-------HH-TC------CCCCTTS---CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -----HH-------hh-hc------cCCcccC---CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 00 00 0111111 123455667999999999999999986
No 386
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.12 E-value=1.3e-12 Score=144.21 Aligned_cols=41 Identities=29% Similarity=0.292 Sum_probs=20.9
Q ss_pred CCCCCcCEEeeecCcCccc----CCcccCCCCCCcEEECcCCCCc
Q 038019 278 GELQMLQILDLSFNNLTGQ----IPATLFNIDSLEYLFLGNNSLS 318 (866)
Q Consensus 278 ~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~ 318 (866)
...++|+.|+|++|.|++. +...+..+++|++|+|++|.++
T Consensus 208 ~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 208 DRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp GGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred hcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 3344555555555555432 2233334456666666666665
No 387
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.12 E-value=1.7e-11 Score=131.08 Aligned_cols=125 Identities=19% Similarity=0.254 Sum_probs=85.1
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeee------cCCCCchhHHHHHHHHHHHHHhcCCCC
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAM------RGHLTEKADVFSFGVVALEIISGRASS 716 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~------~~~~t~ksDVySfGvvLlEl~tg~~p~ 716 (866)
.|++...+...++.|||.+..+..+.. .....||..|+|||.+. ...++.++||||||++++||++|+.|+
T Consensus 153 ~Nil~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~ 229 (298)
T 1phk_A 153 ENILLDDDMNIKLTDFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229 (298)
T ss_dssp GGEEECTTCCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ceEEEcCCCcEEEecccchhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCC
Confidence 366666666778999999888765432 23456899999999875 457899999999999999999999998
Q ss_pred CCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 717 DKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 717 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
....... ... ....+.. ....+....++ ..+.++...|++.||++||++.|+++
T Consensus 230 ~~~~~~~---~~~----~~~~~~~-~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 230 WHRKQML---MLR----MIMSGNY-QFGSPEWDDYS----DTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CCSSHHH---HHH----HHHHTCC-CCCTTTGGGSC----HHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cCccHHH---HHH----HHhcCCc-ccCcccccccC----HHHHHHHHHHccCCcccCCCHHHHHh
Confidence 7543221 111 1111111 11111111222 23556667999999999999999874
No 388
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.10 E-value=9e-12 Score=143.13 Aligned_cols=118 Identities=19% Similarity=0.231 Sum_probs=80.3
Q ss_pred HHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHH
Q 038019 649 AELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLL 728 (866)
Q Consensus 649 ~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~ 728 (866)
.+...++.|||.+..+..+.. .....||++|+|||.+.+ .++.++||||+||+++||+||+.|+......+ +.
T Consensus 164 ~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~ 236 (484)
T 3nyv_A 164 KDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD---IL 236 (484)
T ss_dssp TTCCEEECCTTHHHHBCCCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH
T ss_pred CCCcEEEEeeeeeEEcccccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH---HH
Confidence 344567899999987765432 233469999999998754 79999999999999999999999997644322 22
Q ss_pred HHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 729 EWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 729 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+ ..+... .-.|.....+ + .+.++...|++.+|++|||+.|+++
T Consensus 237 ~~i----~~~~~~-~~~~~~~~~s-~---~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 237 KKV----EKGKYT-FELPQWKKVS-E---SAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp HHH----HHCCCC-CCSGGGGGSC-H---HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHH----HcCCCC-CCCcccccCC-H---HHHHHHHHHCCCChhHCcCHHHHhh
Confidence 222 112110 0011111122 2 3445666999999999999999975
No 389
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.10 E-value=1.9e-11 Score=141.07 Aligned_cols=114 Identities=18% Similarity=0.183 Sum_probs=78.9
Q ss_pred HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHHH
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEWA 731 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~~ 731 (866)
..++.|||.+..+..+. ......||+.|+|||.+. +.++.++||||+||+++||++|+.|+......+ +...+
T Consensus 187 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~i 259 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD---IIKKV 259 (504)
T ss_dssp SEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHH
T ss_pred cEEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHH
Confidence 45789999998876543 233457999999999876 679999999999999999999999998644322 22111
Q ss_pred HHHhhcCCcccccCCcc-cccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 732 WNLHENNQSFGLVDPTL-TEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 732 ~~~~~~~~~~~~~d~~l-~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
..+... .+... ...+ ..+.++...|++.||.+|||+.|+++
T Consensus 260 ----~~~~~~--~~~~~~~~~s----~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 260 ----EKGKYY--FDFNDWKNIS----DEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp ----HHCCCC--CCHHHHTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----HcCCCC--CCccccCCCC----HHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 112110 00000 1111 23455666999999999999999975
No 390
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.07 E-value=3.5e-11 Score=128.68 Aligned_cols=126 Identities=21% Similarity=0.263 Sum_probs=75.8
Q ss_pred CcccCHHHHHHHhcCCccccccCCCC------------ceeEEEeecCCCCccCceeeec-CCCCchhHHHHHHHHHHHH
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGG------------YGPVYKVTANSYGYLAPEYAMR-GHLTEKADVFSFGVVALEI 709 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~------------~g~vy~~~~gt~gY~aPE~~~~-~~~t~ksDVySfGvvLlEl 709 (866)
.|++...+...++.|||.+..+.... .........||..|+|||.+.. +.++.++|||||||+++||
T Consensus 145 ~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l 224 (303)
T 1zy4_A 145 MNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224 (303)
T ss_dssp GGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHH
T ss_pred HhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHH
Confidence 46666666677899999998775431 1122334578999999999875 4799999999999999999
Q ss_pred HhcCCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 710 ISGRASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 710 ~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
++ |+... .+....... ..... ..+.+.. .......+.++...|++.||++|||+.|+++
T Consensus 225 ~~---p~~~~--~~~~~~~~~----~~~~~--~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 225 IY---PFSTG--MERVNILKK----LRSVS--IEFPPDF---DDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HS---CCSSH--HHHHHHHHH----HHSTT--CCCCTTC---CTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Hh---ccCCc--hhHHHHHHh----ccccc--cccCccc---cccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 98 44321 111111111 11110 0111112 2222234556677999999999999999986
No 391
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.04 E-value=5.2e-11 Score=139.26 Aligned_cols=129 Identities=19% Similarity=0.214 Sum_probs=81.4
Q ss_pred CcccCHHH---HHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCC
Q 038019 643 PNIFGYAE---LRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKS 719 (866)
Q Consensus 643 ~~~~~~~~---~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~ 719 (866)
.|++...+ ...++.|||.+..++.+.. .....||.+|+|||.+.++.++.++|||||||+++||+||+.|+...
T Consensus 150 ~NILl~~~g~~~~vKL~DFG~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~ 226 (676)
T 3qa8_A 150 ENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226 (676)
T ss_dssp TTEEEECCSSSCEEEECSCCCCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHeEeecCCCceeEEEcccccccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcc
Confidence 35554422 2356899999998876543 23457899999999999999999999999999999999999999753
Q ss_pred chhhhhcHHHHHHHHhhcCCc----ccccCC------cc---cccCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 038019 720 LDMEKIYLLEWAWNLHENNQS----FGLVDP------TL---TEFNDKEALRVIGVALLCTQTSPMMRPPMSR 779 (866)
Q Consensus 720 ~~~~~~~l~~~~~~~~~~~~~----~~~~d~------~l---~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~ 779 (866)
.. ...|.......... .+.... .+ ..........+.++...|++.||++|||+.|
T Consensus 227 ~~-----~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e 294 (676)
T 3qa8_A 227 WQ-----PVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ 294 (676)
T ss_dssp CH-----HHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred cc-----hhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence 22 12222111111100 011111 11 1122233445666777999999999999866
No 392
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.03 E-value=4e-11 Score=127.52 Aligned_cols=115 Identities=20% Similarity=0.219 Sum_probs=77.7
Q ss_pred HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHHH
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEWA 731 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~~ 731 (866)
..++.|||.+..+..... .....||..|+|||... +.++.++||||||++++||+||+.|+......+ +..
T Consensus 162 ~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~-- 232 (287)
T 2wei_A 162 DIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYD---ILK-- 232 (287)
T ss_dssp CEEECSTTGGGTBCCCSS---CSCHHHHHTTCCHHHHT-TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHH--
T ss_pred cEEEeccCcceeecCCCc---cccccCcccccChHHhc-CCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH---HHH--
Confidence 457899999887765432 22335789999999875 459999999999999999999999987543221 111
Q ss_pred HHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 732 WNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 732 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
....+... ...+.....+ ..+.++...|++.+|++||++.|+++
T Consensus 233 --~~~~~~~~-~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 233 --RVETGKYA-FDLPQWRTIS----DDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp --HHHHCCCC-CCSGGGTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --HHHcCCCC-CCchhhhhcC----HHHHHHHHHHcccChhhCcCHHHHhc
Confidence 11122110 0001111122 23455667999999999999999986
No 393
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=98.96 E-value=3.5e-10 Score=120.15 Aligned_cols=92 Identities=9% Similarity=0.051 Sum_probs=58.9
Q ss_pred CCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchhhhhcHHHHHHHHhhcCCcccccCCcc---cccCHH
Q 038019 678 NSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDMEKIYLLEWAWNLHENNQSFGLVDPTL---TEFNDK 754 (866)
Q Consensus 678 gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l---~~~~~~ 754 (866)
++.+|++| ++.++|||||||++|||+||+.||......+.... ....+.... ......
T Consensus 171 ~~~~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~ 231 (286)
T 3uqc_A 171 AYPATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP------------AERDTAGQPIEPADIDRD 231 (286)
T ss_dssp CSCCCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE------------CCBCTTSCBCCHHHHCTT
T ss_pred EeccccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH------------HHHHhccCCCChhhcccC
Confidence 44556654 78999999999999999999999975433211000 000000000 011111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCcC
Q 038019 755 EALRVIGVALLCTQTSPMMRPPMSRVVAMLAGDIE 789 (866)
Q Consensus 755 ~~~~~~~la~~C~~~~p~~RPsm~~V~~~L~~~~~ 789 (866)
....+.++..+|++.||++| |+.|++++|+....
T Consensus 232 ~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 232 IPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp SCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 12335567779999999999 99999999986443
No 394
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.91 E-value=3.6e-10 Score=135.34 Aligned_cols=114 Identities=18% Similarity=0.122 Sum_probs=78.9
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCchh
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSLDM 722 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~~~ 722 (866)
.|++...+ ..++.|||.++.++..+ ...||++|||||++.++ .+.++|||||||+++||++|..|+......
T Consensus 211 ~NIll~~~-~~kl~DFG~a~~~~~~~------~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~ 282 (681)
T 2pzi_A 211 ENIMLTEE-QLKLIDLGAVSRINSFG------YLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD 282 (681)
T ss_dssp GGEEECSS-CEEECCCTTCEETTCCS------CCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS
T ss_pred HHeEEeCC-cEEEEecccchhcccCC------ccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc
Confidence 36655544 56899999998876542 24689999999998765 499999999999999999998876531110
Q ss_pred hhhcHHHHHHHHhhcCCcccccCCcccccCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHhc
Q 038019 723 EKIYLLEWAWNLHENNQSFGLVDPTLTEFNDKEALRVIGVALLCTQTSPMMRPP-MSRVVAMLAG 786 (866)
Q Consensus 723 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~la~~C~~~~p~~RPs-m~~V~~~L~~ 786 (866)
. +. ... ........+.++..+|++.||++||+ +.++...|.+
T Consensus 283 ~-------------------~~-~~~--~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 283 G-------------------LP-EDD--PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp S-------------------CC-TTC--HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred c-------------------cc-ccc--cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0 00 000 00111234566777999999999995 6666666654
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.89 E-value=2e-08 Score=111.89 Aligned_cols=83 Identities=12% Similarity=-0.006 Sum_probs=42.4
Q ss_pred chhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCC
Q 038019 226 PSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNID 305 (866)
Q Consensus 226 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 305 (866)
...|.++..|+.+.+..+.. ......+..+..|+.+.+..+.+. ...|..+.+|+.+.+..+ ++......|.++.
T Consensus 246 ~~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~ 320 (394)
T 4fs7_A 246 KSVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCT 320 (394)
T ss_dssp SSTTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCT
T ss_pred cccccccccceeEEcCCCcc-eeeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCC
Confidence 34566777788777765422 222334445555555555443321 123445555555555433 3333344555555
Q ss_pred CCcEEECc
Q 038019 306 SLEYLFLG 313 (866)
Q Consensus 306 ~L~~L~L~ 313 (866)
+|+.++|.
T Consensus 321 ~L~~i~lp 328 (394)
T 4fs7_A 321 SLVSIDLP 328 (394)
T ss_dssp TCCEECCC
T ss_pred CCCEEEeC
Confidence 66665554
No 396
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.84 E-value=7.5e-10 Score=121.03 Aligned_cols=103 Identities=14% Similarity=0.121 Sum_probs=51.9
Q ss_pred eeeEEEEEEcccCcCC-C-------CCcccCCCCCCCEEEccCCCCC---------CCCCccccCCCCcCEEeccCCcCC
Q 038019 64 TCHITKLRVYGLNKKG-V-------IPEELVTLQYLTVLKIDQNFFT---------GPLPSFIGNLSRLMFLSFSHNDFS 126 (866)
Q Consensus 64 ~~~v~~L~l~~~~l~~-~-------~p~~l~~l~~L~~L~Ls~n~l~---------~~~p~~l~~l~~L~~L~Ls~N~l~ 126 (866)
.++|+.|.+..+...| . +..++..+++|+.|.|..+.+. +.+...+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3467777776555442 2 1233556778888888654321 123334455666666666655211
Q ss_pred CCCCccccCCCCCCEeeccCCCCCCCCchhhc--CCCCccEEEee
Q 038019 127 GPVPRELGNLKELTVLAFGTNNFSGALPPELG--NLAKLEQLYID 169 (866)
Q Consensus 127 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~--~l~~L~~L~L~ 169 (866)
.++. +. +++|++|+|..|.++......+. .+++|++|+|+
T Consensus 186 -~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 186 -SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp -BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred -eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 1222 22 45566666655554432222232 45555555553
No 397
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.81 E-value=1e-09 Score=119.96 Aligned_cols=63 Identities=21% Similarity=0.208 Sum_probs=31.7
Q ss_pred CCCcCEEeeecCcCcccCCccc---CCCCCCcEEECcCCCCccc----CCc--ccCCCCCEEEeeCCCCCCc
Q 038019 280 LQMLQILDLSFNNLTGQIPATL---FNIDSLEYLFLGNNSLSGT----LPD--QKSENLQKIDLSHNHLSGT 342 (866)
Q Consensus 280 l~~L~~L~Ls~N~l~~~~p~~l---~~l~~L~~L~L~~N~l~g~----~p~--~~~~~L~~L~Ls~N~l~g~ 342 (866)
+++|+.|+|.+|.+.+..+..+ ..+++|++|+|+.|.+++. ++. ...++|+.|+|++|.++..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 4556666666555543222222 1345666666666666532 111 1235566666666665543
No 398
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.79 E-value=5.2e-08 Score=108.42 Aligned_cols=262 Identities=12% Similarity=0.112 Sum_probs=155.9
Q ss_pred EEEEEEcccCcCCCCCcccCCCCCCCEEEccCCC---CCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEee
Q 038019 67 ITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNF---FTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLA 143 (866)
Q Consensus 67 v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~---l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 143 (866)
++++.+.. +++..-..+|.++++|+.+.+..|. ++.+-..+|.++.+|+.+.+..+ ++.....+|.++.+|+.+.
T Consensus 66 L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 55666643 3444445667788888888887653 55444566777777777776654 4434455677777777777
Q ss_pred ccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCCCCCCcccccCCCCCCeEEccCC----
Q 038019 144 FGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGN---- 219 (866)
Q Consensus 144 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N---- 219 (866)
+..+ +.......|..+.+|+.+.+..+ ++..-...|.. .+|+.+.+..+-.. .-...|.++.+|.......+
T Consensus 144 lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~ 219 (394)
T 4gt6_A 144 IPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPA 219 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCB
T ss_pred ccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccceeccccccccc
Confidence 7543 33344456667777777777543 33333333432 45666655443211 22223333334433322211
Q ss_pred --------------------------------CCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCc
Q 038019 220 --------------------------------SFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNA 267 (866)
Q Consensus 220 --------------------------------~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 267 (866)
.+...-...|.++..|+.+.+.++. .......|.+++.|+.+.+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~-~~I~~~aF~~c~~L~~i~l~~- 297 (394)
T 4gt6_A 220 IDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSV-VSIGTGAFMNCPALQDIEFSS- 297 (394)
T ss_dssp SSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTC-CEECTTTTTTCTTCCEEECCT-
T ss_pred ccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEeccccc-ceecCcccccccccccccCCC-
Confidence 1111223467788888888886532 234445677788888888863
Q ss_pred ccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCcc---cCCCCCEEEeeCCCC
Q 038019 268 LITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQ---KSENLQKIDLSHNHL 339 (866)
Q Consensus 268 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---~~~~L~~L~Ls~N~l 339 (866)
.++......|..+.+|+.++|..+ ++......|.++.+|+.+.|..+ ++ .+... .+.+|+.+++.+|..
T Consensus 298 ~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 298 RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 344444557888888888888754 55555677888888888888654 44 23332 246788888887643
No 399
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.71 E-value=1.5e-07 Score=104.67 Aligned_cols=220 Identities=14% Similarity=0.083 Sum_probs=118.6
Q ss_pred CccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCc
Q 038019 106 PSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLR 185 (866)
Q Consensus 106 p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 185 (866)
...|.++++|+.+.|..+- .......|.++.+|+.+++..| ++......|.++..|+.+.+..+... +.+.+....
T Consensus 155 ~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~ 230 (394)
T 4fs7_A 155 DEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKT 230 (394)
T ss_dssp TTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTC
T ss_pred hhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccC
Confidence 3456666777777766443 2234455666677777766554 33344455666666666665543321 122233345
Q ss_pred CCCEEEecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceecc
Q 038019 186 NMQTLWASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLR 265 (866)
Q Consensus 186 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~ 265 (866)
+|+.+.+..+ ++..-...+.++.+|+.+.+..+... .....|..+..|+.+.+....+ ....+..+.+|+.+.+.
T Consensus 231 ~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 231 GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLL 305 (394)
T ss_dssp CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEEC
T ss_pred CCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccc
Confidence 6666666433 22223344556666666666655332 3345566666666665544321 22345556666666665
Q ss_pred CcccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCc--ccCCCCCEEEeeCC
Q 038019 266 NALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPD--QKSENLQKIDLSHN 337 (866)
Q Consensus 266 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~--~~~~~L~~L~Ls~N 337 (866)
.+ ++..-...|..+.+|+.++|..+ ++.....+|.++.+|+.++|..| ++..-.. ..+.+|+.+++..+
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 44 33333445666777777777543 55444566677777777777655 4321111 12356777776543
No 400
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=98.66 E-value=1.1e-08 Score=109.12 Aligned_cols=103 Identities=14% Similarity=0.157 Sum_probs=62.4
Q ss_pred cccCHH---HHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcCCCCCCCc
Q 038019 644 NIFGYA---ELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGRASSDKSL 720 (866)
Q Consensus 644 ~~~~~~---~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~~p~~~~~ 720 (866)
|++... +...++.|||.+..+. ...++.++|||||||+++||+||+.|+....
T Consensus 147 Nil~~~~~~~~~~kl~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 202 (299)
T 3m2w_A 147 NLLYTSKRPNAILKLTDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 202 (299)
T ss_dssp GEEESSSSTTCCEEECCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--
T ss_pred HEEEecCCCCCcEEEeccccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCc
Confidence 555443 3456677887765443 2457889999999999999999999986532
Q ss_pred hhhhhcHHHHHHHHhhcCCcccccCCcccccCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 038019 721 DMEKIYLLEWAWNLHENNQSFGLVDPTLTEFND----KEALRVIGVALLCTQTSPMMRPPMSRVVA 782 (866)
Q Consensus 721 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~----~~~~~~~~la~~C~~~~p~~RPsm~~V~~ 782 (866)
.... .......+..... ..+. .....+.++...|++.||++||++.||++
T Consensus 203 ~~~~-----------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 203 GLAI-----------SPGMKTRIRMGQY-EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp ----------------CCSCCSSCTTCC-SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhh-----------hHHHHHHHhhccc-cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 2110 0000001111110 1111 11234556777999999999999999986
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.59 E-value=3.9e-07 Score=101.32 Aligned_cols=264 Identities=9% Similarity=0.081 Sum_probs=170.5
Q ss_pred eEEEEEEcccC---cCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEe
Q 038019 66 HITKLRVYGLN---KKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVL 142 (866)
Q Consensus 66 ~v~~L~l~~~~---l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 142 (866)
+++++.+..+. ++..-...|.++..|+.+.+..+ ++.+....|.++.+|+.+.|..+ +.......|..+.+|+.+
T Consensus 88 ~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i 165 (394)
T 4gt6_A 88 SLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTV 165 (394)
T ss_dssp TCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEE
T ss_pred cCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceecccccccc
Confidence 57888887653 44444567888888988887654 44455667888899999998754 343555678888888888
Q ss_pred eccCCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCC-------------------------
Q 038019 143 AFGTNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPF------------------------- 197 (866)
Q Consensus 143 ~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l------------------------- 197 (866)
.+..+ ++..-...|. ..+|+.+.+..+ +.......|..+.+|.......+..
T Consensus 166 ~~~~~-~~~I~~~aF~-~~~l~~i~ip~~-~~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (394)
T 4gt6_A 166 TLPDS-VTAIEERAFT-GTALTQIHIPAK-VTRIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQR 242 (394)
T ss_dssp ECCTT-CCEECTTTTT-TCCCSEEEECTT-CCEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTC
T ss_pred cccce-eeEecccccc-ccceeEEEECCc-ccccccchhhhccccceecccccccccccceeeccccccccccccccccc
Confidence 88654 3333334443 356777777543 2333344555555555554332211
Q ss_pred -----------CCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccC
Q 038019 198 -----------TGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRN 266 (866)
Q Consensus 198 -----------~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~ 266 (866)
+..-...|.++.+|+.+.+..+... .-...|.++.+|+.+.+.. .+.......|.++.+|+.+.|..
T Consensus 243 ~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~-~i~~I~~~aF~~c~~L~~i~lp~ 320 (394)
T 4gt6_A 243 EDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSS-RITELPESVFAGCISLKSIDIPE 320 (394)
T ss_dssp CCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCT
T ss_pred ccceEEcCCcceEcccceeeecccccEEecccccce-ecCcccccccccccccCCC-cccccCceeecCCCCcCEEEeCC
Confidence 1111235677888999998765443 4557788999999999863 34455566788999999999976
Q ss_pred cccccCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCcccCCCCCEEEeeCCCC
Q 038019 267 ALITGTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQKSENLQKIDLSHNHL 339 (866)
Q Consensus 267 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~~~~~L~~L~Ls~N~l 339 (866)
+ ++..-...|..+.+|+.+.|..+ ++..-...|.++.+|+.+++.+|..... .......|+.+.+..|.+
T Consensus 321 ~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~~-~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 321 G-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQWN-AISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHHH-TCBCCCCC----------
T ss_pred c-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeehh-hhhccCCCCEEEeCCCCE
Confidence 5 55445567899999999999755 6656667899999999999988764321 112336788888776654
No 402
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.40 E-value=4.1e-08 Score=96.74 Aligned_cols=117 Identities=16% Similarity=0.100 Sum_probs=63.8
Q ss_pred CCcccCCCCCCCEEEccCC-CCCCC----CCccccCCCCcCEEeccCCcCCCC----CCccccCCCCCCEeeccCCCCCC
Q 038019 81 IPEELVTLQYLTVLKIDQN-FFTGP----LPSFIGNLSRLMFLSFSHNDFSGP----VPRELGNLKELTVLAFGTNNFSG 151 (866)
Q Consensus 81 ~p~~l~~l~~L~~L~Ls~n-~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~ 151 (866)
+...+...+.|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.++.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3445666777888888887 77532 334455667777777777777532 22334445666666666666653
Q ss_pred C----CchhhcCCCCccEEEe--ecCCCCCC----ChhhhhcCcCCCEEEecCCCC
Q 038019 152 A----LPPELGNLAKLEQLYI--DSCGAGGE----IPSTFAKLRNMQTLWASDNPF 197 (866)
Q Consensus 152 ~----~p~~l~~l~~L~~L~L--~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l 197 (866)
. +...+...++|++|+| ++|.++.. +...+...++|++|+|++|.+
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 2 2333444455555555 44555432 122233334444444444443
No 403
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.35 E-value=6.2e-06 Score=90.98 Aligned_cols=259 Identities=11% Similarity=0.043 Sum_probs=158.5
Q ss_pred eEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeecc
Q 038019 66 HITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFG 145 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 145 (866)
+++++.+.. +++..-..+|.++.+|+.++|..+ ++.+...+|.++ +|+.+.+..+ ++.+-..+|... +|+.+.+.
T Consensus 47 ~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~lp 121 (379)
T 4h09_A 47 RISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDDFEFP 121 (379)
T ss_dssp GCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSEEECC
T ss_pred CCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-CcccccCC
Confidence 456666642 344444567888888888888654 555555667776 5777776543 443334455543 67777776
Q ss_pred CCCCCCCCchhhcCCCCccEEEeecCCCCCCChhhhhcCcCCCEEEecCCCC----------------------------
Q 038019 146 TNNFSGALPPELGNLAKLEQLYIDSCGAGGEIPSTFAKLRNMQTLWASDNPF---------------------------- 197 (866)
Q Consensus 146 ~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l---------------------------- 197 (866)
.+- +......|.+. +|+.+.+.. .++......|..+.+|+.+.+..+..
T Consensus 122 ~~~-~~i~~~~F~~~-~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (379)
T 4h09_A 122 GAT-TEIGNYIFYNS-SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTE 198 (379)
T ss_dssp TTC-CEECTTTTTTC-CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSE
T ss_pred Ccc-ccccccccccc-eeeeeeccc-eeeccccchhcccccccccccccccceeecccceecccccceeccccccccccc
Confidence 442 21222233332 344444432 23333333444455555444432211
Q ss_pred -------CCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccc
Q 038019 198 -------TGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALIT 270 (866)
Q Consensus 198 -------~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~ 270 (866)
.......+....+|+.+.+..+ +.......|.++..|+.+.+..+ +.......+.++.+|+.+.+..+ +.
T Consensus 199 ~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~ 275 (379)
T 4h09_A 199 FTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK 275 (379)
T ss_dssp EECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS
T ss_pred cccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce
Confidence 1112334556677888888655 34345567888999999998764 44455567888889999988654 44
Q ss_pred cCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCCCCcccCCcc---cCCCCCEEEeeCC
Q 038019 271 GTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNNSLSGTLPDQ---KSENLQKIDLSHN 337 (866)
Q Consensus 271 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---~~~~L~~L~Ls~N 337 (866)
......|..+.+|+.+.+.++.++......|.++.+|+.+.|..+ ++ .+... .+.+|+.+.+..+
T Consensus 276 ~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 276 TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCCTT
T ss_pred eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEECCc
Confidence 344457888999999999998888777788999999999999754 44 22222 2356777766543
No 404
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.32 E-value=8.3e-08 Score=94.49 Aligned_cols=116 Identities=12% Similarity=0.119 Sum_probs=63.8
Q ss_pred CccccCCCCcCEEeccCC-cCCC----CCCccccCCCCCCEeeccCCCCCCC----CchhhcCCCCccEEEeecCCCCCC
Q 038019 106 PSFIGNLSRLMFLSFSHN-DFSG----PVPRELGNLKELTVLAFGTNNFSGA----LPPELGNLAKLEQLYIDSCGAGGE 176 (866)
Q Consensus 106 p~~l~~l~~L~~L~Ls~N-~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~ 176 (866)
...+...++|++|+|++| .|.. .+...+...++|++|+|++|.+... +...+...++|++|+|++|.++..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 344566778888888887 7753 2334455667777777777777542 223344445666666666666543
Q ss_pred ----ChhhhhcCcCCCEEEe--cCCCCCCC----CcccccCCCCCCeEEccCCCC
Q 038019 177 ----IPSTFAKLRNMQTLWA--SDNPFTGK----IPDFIGNWTKLKSLRFQGNSF 221 (866)
Q Consensus 177 ----~p~~~~~l~~L~~L~L--~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l 221 (866)
+...+...++|++|+| ++|.++.. +.+.+...++|++|+|++|.+
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 2334444455555555 55555432 122233334455555555444
No 405
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.28 E-value=7.8e-08 Score=99.65 Aligned_cols=77 Identities=21% Similarity=0.250 Sum_probs=35.3
Q ss_pred CCccEEEeecCCCCC--CChhhhhcCcCCCEEEecCCCCCCCCcccccCCC--CCCeEEccCCCCCCCCc-------hhh
Q 038019 161 AKLEQLYIDSCGAGG--EIPSTFAKLRNMQTLWASDNPFTGKIPDFIGNWT--KLKSLRFQGNSFQGPIP-------SSL 229 (866)
Q Consensus 161 ~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~--~L~~L~L~~N~l~~~~p-------~~~ 229 (866)
++|+.|+|++|++++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+| ..+
T Consensus 170 ~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il 247 (267)
T 3rw6_A 170 PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIR 247 (267)
T ss_dssp TTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHH
T ss_pred CCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHH
Confidence 334444444444433 2233444455555555555555432 1222222 55556666665554333 234
Q ss_pred cCCCCCCEEE
Q 038019 230 SKLASLESLQ 239 (866)
Q Consensus 230 ~~l~~L~~L~ 239 (866)
..+++|+.|+
T Consensus 248 ~~~P~L~~LD 257 (267)
T 3rw6_A 248 ERFPKLLRLD 257 (267)
T ss_dssp HHCTTCCEES
T ss_pred HHCcccCeEC
Confidence 5566666664
No 406
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.18 E-value=7.8e-07 Score=92.11 Aligned_cols=104 Identities=18% Similarity=0.253 Sum_probs=77.6
Q ss_pred cCCCCCCCE--EEccCCCCCCCCCc----cccCCCCcCEEeccCCcCCC--CCCccccCCCCCCEeeccCCCCCCCCchh
Q 038019 85 LVTLQYLTV--LKIDQNFFTGPLPS----FIGNLSRLMFLSFSHNDFSG--PVPRELGNLKELTVLAFGTNNFSGALPPE 156 (866)
Q Consensus 85 l~~l~~L~~--L~Ls~n~l~~~~p~----~l~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 156 (866)
|...+.|+. ++++.|... .++. ...++++|+.|+|++|+|++ .+|..+..+++|++|+|++|++++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 444455555 677777433 2222 22568899999999999997 4567778899999999999999865 34
Q ss_pred hcCCC--CccEEEeecCCCCCCCh-------hhhhcCcCCCEEE
Q 038019 157 LGNLA--KLEQLYIDSCGAGGEIP-------STFAKLRNMQTLW 191 (866)
Q Consensus 157 l~~l~--~L~~L~L~~n~l~~~~p-------~~~~~l~~L~~L~ 191 (866)
+..+. +|++|+|++|.+.+.+| ..+..+++|+.||
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 44444 99999999999987665 3477899999885
No 407
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=98.16 E-value=5.7e-07 Score=97.54 Aligned_cols=58 Identities=7% Similarity=-0.007 Sum_probs=47.7
Q ss_pred HHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHH-HHHHHhcCCCCC
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVV-ALEIISGRASSD 717 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvv-LlEl~tg~~p~~ 717 (866)
..++.|||.++.+..+ ...||..|||||.+.+.. +.++||||++++ ..++++|..|+.
T Consensus 220 ~vkL~DFG~a~~~~~~-------~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 220 QVSIIDYTLSRLERDG-------IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp EEEECCCTTCBEEETT-------EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred eEEEeeccccEecCCC-------cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 6789999999988754 236999999999987555 999999998777 677888988863
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.07 E-value=5.5e-05 Score=83.29 Aligned_cols=239 Identities=12% Similarity=0.012 Sum_probs=152.4
Q ss_pred eEEEEEEcccCcCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeecc
Q 038019 66 HITKLRVYGLNKKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFG 145 (866)
Q Consensus 66 ~v~~L~l~~~~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 145 (866)
+++++.+.. +++..-..+|.++ .|+.+.+..+ ++.+....|... +|+.+.|..+- +......|.+. +|+.+.+.
T Consensus 70 ~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~lp~~~-~~i~~~~F~~~-~l~~~~~~ 143 (379)
T 4h09_A 70 NMTKVTVAS-TVTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDDFEFPGAT-TEIGNYIFYNS-SVKRIVIP 143 (379)
T ss_dssp TCCEEEECT-TCCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSEEECCTTC-CEECTTTTTTC-CCCEEEEC
T ss_pred CCCEEEeCC-cceEechhhhcCC-CCceEECCce-eeEeccceeccC-CcccccCCCcc-ccccccccccc-eeeeeecc
Confidence 577888854 3554445667666 5777766543 443334445543 67887776542 21222333332 34444332
Q ss_pred CCCCCCCCchhhcCCCCccEEEeecC-----------------------------------CCCCCChhhhhcCcCCCEE
Q 038019 146 TNNFSGALPPELGNLAKLEQLYIDSC-----------------------------------GAGGEIPSTFAKLRNMQTL 190 (866)
Q Consensus 146 ~N~l~~~~p~~l~~l~~L~~L~L~~n-----------------------------------~l~~~~p~~~~~l~~L~~L 190 (866)
.+ ++......+..+.+|+.+.+..+ .........+..+.+|+.+
T Consensus 144 ~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i 222 (379)
T 4h09_A 144 KS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKI 222 (379)
T ss_dssp TT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEE
T ss_pred ce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeeccccccccccee
Confidence 22 22222333444444444333221 1122234456677889999
Q ss_pred EecCCCCCCCCcccccCCCCCCeEEccCCCCCCCCchhhcCCCCCCEEEccCccCCCCCchhhhcCCCCCceeccCcccc
Q 038019 191 WASDNPFTGKIPDFIGNWTKLKSLRFQGNSFQGPIPSSLSKLASLESLQMSDIYNVSSSLDFVMSLKNLTDLSLRNALIT 270 (866)
Q Consensus 191 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~ 270 (866)
.+..+ +.......+.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +.......|.++.+|+.+.+.++.++
T Consensus 223 ~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~ 299 (379)
T 4h09_A 223 TITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE 299 (379)
T ss_dssp ECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC
T ss_pred eeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccc
Confidence 88655 44344567788899999999776 55455678889999999998653 44555567888999999999988887
Q ss_pred cCCCcccCCCCCcCEEeeecCcCcccCCcccCCCCCCcEEECcCC
Q 038019 271 GTIPFGIGELQMLQILDLSFNNLTGQIPATLFNIDSLEYLFLGNN 315 (866)
Q Consensus 271 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 315 (866)
..-...|..+.+|+.+.|..+ ++..-..+|.++.+|+.+.+..+
T Consensus 300 ~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 300 TLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred eehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 666778999999999999755 66566678999999999888554
No 409
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.84 E-value=3.5e-06 Score=80.95 Aligned_cols=82 Identities=9% Similarity=0.091 Sum_probs=37.6
Q ss_pred CCCEEEccCCCCCCCCCccccCCCCcCEEeccCCc-CCCCCCccccCC----CCCCEeeccCCC-CCCCCchhhcCCCCc
Q 038019 90 YLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHND-FSGPVPRELGNL----KELTVLAFGTNN-FSGALPPELGNLAKL 163 (866)
Q Consensus 90 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l----~~L~~L~Ls~N~-l~~~~p~~l~~l~~L 163 (866)
.|+.|||+++.++..--..+.++++|++|+|++|. |+..--..++.+ ++|++|+|++|. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45666666655554433444555555555555553 432222223332 235555554442 433322334444444
Q ss_pred cEEEeecC
Q 038019 164 EQLYIDSC 171 (866)
Q Consensus 164 ~~L~L~~n 171 (866)
++|+|++|
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 44444444
No 410
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.76 E-value=1.1e-05 Score=77.53 Aligned_cols=83 Identities=14% Similarity=0.179 Sum_probs=48.7
Q ss_pred CCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCC-CCCCCchhhcCC----CCccEEEeecCC-CCCCChhhhhcCcC
Q 038019 113 SRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNN-FSGALPPELGNL----AKLEQLYIDSCG-AGGEIPSTFAKLRN 186 (866)
Q Consensus 113 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l----~~L~~L~L~~n~-l~~~~p~~~~~l~~ 186 (866)
.+|++|||+++.|+..--..+.++++|++|+|++|. +++.--..++.+ ++|++|+|++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467888888877765544556677777777777764 554333344443 256666666653 44433334455555
Q ss_pred CCEEEecCC
Q 038019 187 MQTLWASDN 195 (866)
Q Consensus 187 L~~L~L~~N 195 (866)
|++|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 666665555
No 411
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.13 E-value=0.00014 Score=71.05 Aligned_cols=88 Identities=14% Similarity=0.029 Sum_probs=51.4
Q ss_pred ccCCCCCCCEEEccCC-CCCCC----CCccccCCCCcCEEeccCCcCCC----CCCccccCCCCCCEeeccCCCCCCCC-
Q 038019 84 ELVTLQYLTVLKIDQN-FFTGP----LPSFIGNLSRLMFLSFSHNDFSG----PVPRELGNLKELTVLAFGTNNFSGAL- 153 (866)
Q Consensus 84 ~l~~l~~L~~L~Ls~n-~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~- 153 (866)
.+.+-+.|+.|+|++| .|... +...+..-+.|+.|+|++|+|.. .+...+..-+.|++|+|+.|.|+..-
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3455567778888774 66432 33445566777777777777753 22334445567777777777765432
Q ss_pred ---chhhcCCCCccEEEeecC
Q 038019 154 ---PPELGNLAKLEQLYIDSC 171 (866)
Q Consensus 154 ---p~~l~~l~~L~~L~L~~n 171 (866)
...+..-+.|++|+|++|
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHhhCCceeEEECCCC
Confidence 223444455666666543
No 412
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.84 E-value=0.00027 Score=69.09 Aligned_cols=67 Identities=13% Similarity=0.075 Sum_probs=37.9
Q ss_pred ccCCCCcCEEeccCC-cCCC----CCCccccCCCCCCEeeccCCCCCCC----CchhhcCCCCccEEEeecCCCCC
Q 038019 109 IGNLSRLMFLSFSHN-DFSG----PVPRELGNLKELTVLAFGTNNFSGA----LPPELGNLAKLEQLYIDSCGAGG 175 (866)
Q Consensus 109 l~~l~~L~~L~Ls~N-~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~n~l~~ 175 (866)
+.+-+.|++|+|++| +|.. .+-..+..-+.|+.|+|++|.+... +...+..-+.|++|+|+.|.|+.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 445567888888775 6642 2234455566777777777766532 22333344555555555555543
No 413
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.79 E-value=1.6e-05 Score=92.44 Aligned_cols=76 Identities=11% Similarity=-0.119 Sum_probs=41.2
Q ss_pred hhccCCCCCcccCHHHHHHHhcCCccccccCCCCceeEEEeecCCCCccCceeeecCCCCchhHHHHHHHHHHHHHhcC
Q 038019 635 VLVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTANSYGYLAPEYAMRGHLTEKADVFSFGVVALEIISGR 713 (866)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~gt~gY~aPE~~~~~~~t~ksDVySfGvvLlEl~tg~ 713 (866)
++|++.+..||+..++...|+.|||+++.+...+ ......+||++|||||.+. +++..++|+||.|++++++.++.
T Consensus 360 IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~--~~~~t~vGTp~YmAPE~l~-g~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 360 FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC--SWPTNLVQSFFVFVNELFA-ENKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp CEESCCCGGGEEECTTSCEEECCCTTEESCC-----CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred ceeccCchHhEEECCCCCEEEeecccCeeCCCCC--ccccCceechhhccHHHhC-CCCCCcccccccccchhhhcccc
Confidence 3444444458888888888999999999886543 2223457999999999885 56788999999999888775553
No 414
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.07 E-value=0.0096 Score=54.15 Aligned_cols=55 Identities=16% Similarity=0.149 Sum_probs=26.4
Q ss_pred EEEEcccCcC-CCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCCcC
Q 038019 69 KLRVYGLNKK-GVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHNDF 125 (866)
Q Consensus 69 ~L~l~~~~l~-~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 125 (866)
.++.++++++ ..+|..|. .+|++|+|++|+|+...+..|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555554 23443322 2455555555555544444444555555555555443
No 415
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.84 E-value=0.011 Score=53.69 Aligned_cols=57 Identities=21% Similarity=0.294 Sum_probs=47.4
Q ss_pred CEEEccCCCCC-CCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeeccCCCCC
Q 038019 92 TVLKIDQNFFT-GPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFGTNNFS 150 (866)
Q Consensus 92 ~~L~Ls~n~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 150 (866)
..++.+++.++ ..+|..+. .+|++|+|++|+|+..-+..|..+++|++|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47899999986 35665433 46999999999999777788999999999999999875
No 416
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=95.47 E-value=0.03 Score=53.73 Aligned_cols=91 Identities=29% Similarity=0.347 Sum_probs=71.2
Q ss_pred CchhhhhhcccCCCCcceeeeeeeCCCceEEEeeeeecCCCCCcccccccCceEEEEEEcCeeeeeccccchhhCCCCce
Q 038019 456 RTPKLYQTSRISAGSLRYYGLGLVNGPYNVSLLFAETNFPDPSTERWESRGRRVFDIYVQGTLRWKDFDISKEAGGPNRA 535 (866)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (866)
.|..++++.|....++++..-...++.|.++++|+|+.+. ..++++|+++++|...+++|++...+++ ..+
T Consensus 52 ~~~~lY~TaR~~~~~~tY~f~v~~~G~Y~VrLhF~ei~~~--------~~~~rvFdV~ing~~~l~~fdi~~~ag~-~~~ 122 (174)
T 2jwp_A 52 EDQVLYQTERYNEDSFGYDIPIKEEGEYVLVLKFAEVYFA--------QSQQKVFDVRVNGHTVVKDLDIFDRVGH-STA 122 (174)
T ss_dssp HHHHTTTCCCCCCSCEEEEEECCSCEEEEEEEEEECCSCC--------CSSSSCEEEEETTEEEEEEECHHHHHSS-SSC
T ss_pred CCchhhhhhccCCCCeEEEEEeCCCeEEEEEEEEeccccC--------CCCCeEeEEEECCEEeecCcCHHHhhCC-Cee
Confidence 3566888888877777776666667899999999998652 2688999999999999999999988876 456
Q ss_pred EEEEEEEEEccCcceeEeee
Q 038019 536 IIKNFSATVSENHLEIHLFW 555 (866)
Q Consensus 536 ~~~~~~~~~~~n~l~~~~~~ 555 (866)
+.+.|.+.+.++.+.++..+
T Consensus 123 ~~~~~~~~v~~~~l~i~~~~ 142 (174)
T 2jwp_A 123 HDEIIPISIKKGKLSVQGEV 142 (174)
T ss_dssp EEEEEEEEEETTEEEETTEE
T ss_pred EEEEEEEEEecCceeeeeee
Confidence 67778788777776665443
No 417
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=92.85 E-value=0.003 Score=72.68 Aligned_cols=80 Identities=11% Similarity=-0.085 Sum_probs=59.0
Q ss_pred hccCCCCCcccCHHHHHHHhcCCccccccCCCCcee-----EEEeecCCCCccCceeeec--CCCCchhHHHHHHHHHHH
Q 038019 636 LVGIGSKPNIFGYAELRSATKDFNRSNKLGEGGYGP-----VYKVTANSYGYLAPEYAMR--GHLTEKADVFSFGVVALE 708 (866)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~dF~~~~~lg~g~~g~-----vy~~~~gt~gY~aPE~~~~--~~~t~ksDVySfGvvLlE 708 (866)
.|......|++... ..++.|||.++.+....... ..+...||+.|||||++.. ..|+.++|+||..+-.+|
T Consensus 453 iHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~ 530 (540)
T 3en9_A 453 IHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMK 530 (540)
T ss_dssp ECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHH
T ss_pred ccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 33333444666665 88899999999886532111 1124578999999999976 678889999999999999
Q ss_pred HHhcCCCCC
Q 038019 709 IISGRASSD 717 (866)
Q Consensus 709 l~tg~~p~~ 717 (866)
.+.+|.++.
T Consensus 531 ~v~~r~rY~ 539 (540)
T 3en9_A 531 DVERRARYV 539 (540)
T ss_dssp HHHTCSCCC
T ss_pred HHHhccccC
Confidence 998887763
No 418
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=71.82 E-value=0.92 Score=31.91 Aligned_cols=26 Identities=19% Similarity=0.415 Sum_probs=13.5
Q ss_pred cEEEEeehHHHHHHHHHHHHHhhhee
Q 038019 601 GLIVGIAVPLGILGLIVISIMFYLWR 626 (866)
Q Consensus 601 ~~~~~i~~~~~~~~~~~~~~~~~~~~ 626 (866)
.|+.|+..|+++++++++.+++|++|
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhh
Confidence 35556655565555555444444443
No 419
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=71.64 E-value=2 Score=44.47 Aligned_cols=34 Identities=44% Similarity=0.865 Sum_probs=31.0
Q ss_pred cccCHHHHHHHhcCCccc------cccCCCCceeEEEeec
Q 038019 644 NIFGYAELRSATKDFNRS------NKLGEGGYGPVYKVTA 677 (866)
Q Consensus 644 ~~~~~~~~~~~~~dF~~~------~~lg~g~~g~vy~~~~ 677 (866)
..|.+.++..++.+|... +.||+|+||.||++..
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~ 52 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV 52 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE
Confidence 568999999999999988 8899999999999874
No 420
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=64.14 E-value=1.3 Score=31.16 Aligned_cols=26 Identities=23% Similarity=0.325 Sum_probs=12.4
Q ss_pred cEEEEeehHHHHHHHHHHHHHhhhee
Q 038019 601 GLIVGIAVPLGILGLIVISIMFYLWR 626 (866)
Q Consensus 601 ~~~~~i~~~~~~~~~~~~~~~~~~~~ 626 (866)
.|+.|+..|+..++++++.+++|++|
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RR 36 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRR 36 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhh
Confidence 35555555555554444444444433
No 421
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=58.34 E-value=4.5 Score=42.23 Aligned_cols=35 Identities=40% Similarity=0.692 Sum_probs=31.6
Q ss_pred CcccCHHHHHHHhcCCccccccCCCCceeEEEeec
Q 038019 643 PNIFGYAELRSATKDFNRSNKLGEGGYGPVYKVTA 677 (866)
Q Consensus 643 ~~~~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~ 677 (866)
...|+..++..+..+|...+.||+|+||.||++..
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~ 51 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL 51 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECC
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEe
Confidence 35688999999999999999999999999999874
No 422
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=53.44 E-value=5.1 Score=41.78 Aligned_cols=21 Identities=33% Similarity=0.691 Sum_probs=18.5
Q ss_pred cCCccccccCCCCceeEEEee
Q 038019 656 KDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 656 ~dF~~~~~lg~g~~g~vy~~~ 676 (866)
++|.+.+.||+|+||.||+|.
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~ 56 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGK 56 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEE
Confidence 466778899999999999996
No 423
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=47.48 E-value=4.6 Score=42.20 Aligned_cols=20 Identities=35% Similarity=0.547 Sum_probs=16.6
Q ss_pred CCccccccCCCCceeEEEee
Q 038019 657 DFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 657 dF~~~~~lg~g~~g~vy~~~ 676 (866)
++.+.+.||+|+||.||+|.
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~ 46 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGH 46 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEE
T ss_pred HCeEeeEeccCCCcEEEEEE
Confidence 34456789999999999986
No 424
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=46.61 E-value=4.7 Score=42.53 Aligned_cols=21 Identities=33% Similarity=0.643 Sum_probs=18.5
Q ss_pred cCCccccccCCCCceeEEEee
Q 038019 656 KDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 656 ~dF~~~~~lg~g~~g~vy~~~ 676 (866)
.||-+.+.||+|+||.||+|.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~ 61 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAE 61 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEE
T ss_pred HHeEEEEEEccCCCcEEEEEE
Confidence 567778999999999999985
No 425
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=45.18 E-value=3.9 Score=28.65 Aligned_cols=24 Identities=13% Similarity=0.199 Sum_probs=10.4
Q ss_pred EEEeehHHHHHHHHHHHHHhhhee
Q 038019 603 IVGIAVPLGILGLIVISIMFYLWR 626 (866)
Q Consensus 603 ~~~i~~~~~~~~~~~~~~~~~~~~ 626 (866)
+++.++|+.+++++.+.+++|.+|
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RR 37 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKR 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhheeh
Confidence 444455544333333344444444
No 426
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=44.05 E-value=5.3 Score=41.49 Aligned_cols=21 Identities=29% Similarity=0.632 Sum_probs=16.2
Q ss_pred cCCccccccCCCCceeEEEee
Q 038019 656 KDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 656 ~dF~~~~~lg~g~~g~vy~~~ 676 (866)
.||-+.+.||+|+||.||+|.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~ 33 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAE 33 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEE
Confidence 466778899999999999985
No 427
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=42.73 E-value=3.5 Score=45.55 Aligned_cols=30 Identities=27% Similarity=0.479 Sum_probs=25.3
Q ss_pred CHHHHHHHhcCCccccccCCCCceeEEEee
Q 038019 647 GYAELRSATKDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 647 ~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~ 676 (866)
.+.+++..+.+|...+.||+|+||.||++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~ 94 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVK 94 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEE
Confidence 345556667899999999999999999986
No 428
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=41.25 E-value=6.2 Score=41.03 Aligned_cols=20 Identities=20% Similarity=0.537 Sum_probs=16.8
Q ss_pred CCccccccCCCCceeEEEee
Q 038019 657 DFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 657 dF~~~~~lg~g~~g~vy~~~ 676 (866)
++-+.+.||+|+||.||+|.
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~ 23 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGK 23 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEE
Confidence 34567889999999999986
No 429
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=41.15 E-value=5.1 Score=41.60 Aligned_cols=22 Identities=36% Similarity=0.767 Sum_probs=17.5
Q ss_pred hcCCccccccCCCCceeEEEee
Q 038019 655 TKDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 655 ~~dF~~~~~lg~g~~g~vy~~~ 676 (866)
++||..-+.||+|+||.||++.
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~ 25 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAK 25 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEE
T ss_pred chhCEEeeEEecCCCeEEEEEE
Confidence 4578888999999999999986
No 430
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=38.82 E-value=9.5 Score=39.74 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=26.5
Q ss_pred cccCHHHHHHHhcC----------CccccccCCCCceeEEEee
Q 038019 644 NIFGYAELRSATKD----------FNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 644 ~~~~~~~~~~~~~d----------F~~~~~lg~g~~g~vy~~~ 676 (866)
..+++++++.++.. |...+.||+|+||.||++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~ 65 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAR 65 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEE
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEE
Confidence 45888999888865 5666789999999999986
No 431
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=38.34 E-value=61 Score=27.10 Aligned_cols=43 Identities=12% Similarity=0.036 Sum_probs=19.6
Q ss_pred CCCCCccccCCCCcCEEeccCCcCCCCCCccccCCCCCCEeecc
Q 038019 102 TGPLPSFIGNLSRLMFLSFSHNDFSGPVPRELGNLKELTVLAFG 145 (866)
Q Consensus 102 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 145 (866)
+.+-...|.++.+|+.+.|-.+ ++.+-..+|.++.+|+.+.+.
T Consensus 9 t~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 9 VGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred CEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 3333344555555555555432 332333445555555555443
No 432
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=38.33 E-value=5.3 Score=41.63 Aligned_cols=30 Identities=33% Similarity=0.605 Sum_probs=25.0
Q ss_pred HHHHHHhcCCccccccCCCCceeEEEeecC
Q 038019 649 AELRSATKDFNRSNKLGEGGYGPVYKVTAN 678 (866)
Q Consensus 649 ~~~~~~~~dF~~~~~lg~g~~g~vy~~~~g 678 (866)
.++..++.+|...+.||+|+||.||++...
T Consensus 32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~ 61 (321)
T 2qkw_B 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLR 61 (321)
T ss_dssp SCCCCCCCCCSCCCCSCBCSSSEEEEEECT
T ss_pred HHHHHHHhccCccceeecCCCeeEEEEEEC
Confidence 344557889999999999999999999753
No 433
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=37.15 E-value=9.5 Score=38.99 Aligned_cols=22 Identities=27% Similarity=0.508 Sum_probs=16.0
Q ss_pred hcCCccccccCCCCceeEEEee
Q 038019 655 TKDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 655 ~~dF~~~~~lg~g~~g~vy~~~ 676 (866)
+++|.+.+.||+|+||.||++.
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~ 33 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAY 33 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEE
Confidence 5789999999999999999986
No 434
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=36.51 E-value=7 Score=41.66 Aligned_cols=26 Identities=19% Similarity=0.411 Sum_probs=21.1
Q ss_pred HHHHhcCCccccccCCCCceeEEEee
Q 038019 651 LRSATKDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 651 ~~~~~~dF~~~~~lg~g~~g~vy~~~ 676 (866)
++.-.++|.+.+.||+|+||.||+|.
T Consensus 59 wEi~~~~~~l~~~LG~G~fG~Vy~a~ 84 (353)
T 4ase_A 59 WEFPRDRLKLGKPLGRGAFGQVIEAD 84 (353)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEE
T ss_pred cEecHHHeEEeeEEecCCCeEEEEEE
Confidence 33334678888999999999999986
No 435
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=35.22 E-value=9.9 Score=40.58 Aligned_cols=22 Identities=36% Similarity=0.705 Sum_probs=19.4
Q ss_pred hcCCccccccCCCCceeEEEee
Q 038019 655 TKDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 655 ~~dF~~~~~lg~g~~g~vy~~~ 676 (866)
.+.|.+.+.||+|+||.||++.
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~ 41 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLAT 41 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEE
T ss_pred cCcEEEEEEEecccCcEEEEEE
Confidence 3568899999999999999985
No 436
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=34.80 E-value=72 Score=31.16 Aligned_cols=30 Identities=13% Similarity=0.211 Sum_probs=20.3
Q ss_pred CccCceeeecCCCCchhHHHHHHHHHHHHHh
Q 038019 681 GYLAPEYAMRGHLTEKADVFSFGVVALEIIS 711 (866)
Q Consensus 681 gY~aPE~~~~~~~t~ksDVySfGvvLlEl~t 711 (866)
-+.+||... ...++|.=|||+|+++|.-+-
T Consensus 102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 102 PPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp -----CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred CCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 356787764 356789999999999998764
No 437
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=32.90 E-value=9.5 Score=39.79 Aligned_cols=21 Identities=33% Similarity=0.580 Sum_probs=19.2
Q ss_pred cCCccccccCCCCceeEEEee
Q 038019 656 KDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 656 ~dF~~~~~lg~g~~g~vy~~~ 676 (866)
.||.+.+.||+|+||.||++.
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~ 52 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLAR 52 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEE
Confidence 578889999999999999986
No 438
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=31.96 E-value=9.2 Score=25.93 Aligned_cols=12 Identities=33% Similarity=0.415 Sum_probs=6.5
Q ss_pred cEEEEeehHHHH
Q 038019 601 GLIVGIAVPLGI 612 (866)
Q Consensus 601 ~~~~~i~~~~~~ 612 (866)
+.++|++++..+
T Consensus 11 GaIAGiVvG~v~ 22 (38)
T 2k1k_A 11 GEIVAVIFGLLL 22 (38)
T ss_dssp HHHHHHHHHHHH
T ss_pred CceeeeehHHHH
Confidence 455566665543
No 439
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=29.47 E-value=14 Score=39.09 Aligned_cols=22 Identities=32% Similarity=0.643 Sum_probs=13.3
Q ss_pred hcCCccccccCCCCceeEEEee
Q 038019 655 TKDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 655 ~~dF~~~~~lg~g~~g~vy~~~ 676 (866)
.++|-+-+.||+|+||.||++.
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~ 44 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVK 44 (350)
T ss_dssp CCCEEEEEEC------CEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEE
Confidence 3578888999999999999986
No 440
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=29.02 E-value=16 Score=37.69 Aligned_cols=17 Identities=29% Similarity=0.518 Sum_probs=14.9
Q ss_pred cccccCCCCceeEEEee
Q 038019 660 RSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 660 ~~~~lg~g~~g~vy~~~ 676 (866)
..+.||+|+||.||++.
T Consensus 30 ~~~~iG~G~fg~Vy~a~ 46 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGL 46 (290)
T ss_dssp EEEEEEECSSEEEEEEE
T ss_pred eeeEEecCcCcEEEEEE
Confidence 45679999999999986
No 441
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=28.97 E-value=12 Score=38.81 Aligned_cols=21 Identities=33% Similarity=0.699 Sum_probs=18.7
Q ss_pred cCCccccccCCCCceeEEEee
Q 038019 656 KDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 656 ~dF~~~~~lg~g~~g~vy~~~ 676 (866)
++|.+-+.||+|+||.||++.
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~ 44 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVK 44 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEE
T ss_pred cccEEEEEEecCCCeEEEEEE
Confidence 468889999999999999875
No 442
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=28.18 E-value=12 Score=40.86 Aligned_cols=29 Identities=28% Similarity=0.550 Sum_probs=24.4
Q ss_pred HHHHHHHhcCCccccccCCCCceeEEEee
Q 038019 648 YAELRSATKDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 648 ~~~~~~~~~dF~~~~~lg~g~~g~vy~~~ 676 (866)
..+++.+..+|...+.||+|+||.||++.
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~ 89 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVR 89 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEE
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEE
Confidence 34555667899999999999999999986
No 443
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=27.83 E-value=15 Score=42.68 Aligned_cols=22 Identities=36% Similarity=0.801 Sum_probs=20.2
Q ss_pred hcCCccccccCCCCceeEEEee
Q 038019 655 TKDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 655 ~~dF~~~~~lg~g~~g~vy~~~ 676 (866)
++||.+-++||+|+||.||++.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~ 209 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCR 209 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEE
T ss_pred hHHeEEEEEEecccCeEEEEEE
Confidence 5789999999999999999986
No 444
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=27.01 E-value=20 Score=37.63 Aligned_cols=29 Identities=21% Similarity=0.295 Sum_probs=15.3
Q ss_pred HHHHHHHhcCCccccccCCCCceeEEEee
Q 038019 648 YAELRSATKDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 648 ~~~~~~~~~dF~~~~~lg~g~~g~vy~~~ 676 (866)
..+....+++|...+.||+|+||.||++.
T Consensus 15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~ 43 (360)
T 3e3p_A 15 DERSRKEMDRFQVERMAGQGTFGTVQLGK 43 (360)
T ss_dssp SHHHHHHHTTEEEC----------CEEEE
T ss_pred hhhchhhccceEEEEEEecCCCeEEEEEE
Confidence 34566778999999999999999999986
No 445
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=26.79 E-value=1.1e+02 Score=25.48 Aligned_cols=46 Identities=9% Similarity=0.042 Sum_probs=36.0
Q ss_pred cCCCCCcccCCCCCCCEEEccCCCCCCCCCccccCCCCcCEEeccCC
Q 038019 77 KKGVIPEELVTLQYLTVLKIDQNFFTGPLPSFIGNLSRLMFLSFSHN 123 (866)
Q Consensus 77 l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N 123 (866)
++..-...|.+++.|+.+.|-.+ ++.+-...|.++.+|+.+.+...
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 44444567899999999999875 55566778999999999998764
No 446
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=26.58 E-value=13 Score=39.13 Aligned_cols=22 Identities=18% Similarity=0.496 Sum_probs=18.6
Q ss_pred hcCCccccccCCCCceeEEEee
Q 038019 655 TKDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 655 ~~dF~~~~~lg~g~~g~vy~~~ 676 (866)
+.+|...+.||+|+||.||++.
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~ 78 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMK 78 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEE
Confidence 3457777889999999999986
No 447
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=25.87 E-value=5 Score=41.70 Aligned_cols=22 Identities=45% Similarity=0.966 Sum_probs=19.3
Q ss_pred cCCccccccCCCCceeEEEeec
Q 038019 656 KDFNRSNKLGEGGYGPVYKVTA 677 (866)
Q Consensus 656 ~dF~~~~~lg~g~~g~vy~~~~ 677 (866)
++|...+.||+|+||.||++..
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~ 78 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRS 78 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEE
Confidence 4688889999999999999874
No 448
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=25.60 E-value=11 Score=41.00 Aligned_cols=31 Identities=26% Similarity=0.419 Sum_probs=25.8
Q ss_pred cCHHHHHHHhcCCccccccCCCCceeEEEee
Q 038019 646 FGYAELRSATKDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 646 ~~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~ 676 (866)
+...+....+.+|...+.||+|+||.||++.
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~ 81 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVK 81 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEE
Confidence 4455556668899999999999999999986
No 449
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=24.62 E-value=19 Score=38.89 Aligned_cols=21 Identities=24% Similarity=0.596 Sum_probs=18.3
Q ss_pred cCCccccccCCCCceeEEEee
Q 038019 656 KDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 656 ~dF~~~~~lg~g~~g~vy~~~ 676 (866)
++|..-+.||+|+||.||++.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~ 74 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSAR 74 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEE
T ss_pred CCeEEEEEEecccCeEEEEEE
Confidence 357778999999999999986
No 450
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=24.53 E-value=25 Score=37.04 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=26.5
Q ss_pred CHHHHHHHhcCCccccccCCCCceeEEEeec
Q 038019 647 GYAELRSATKDFNRSNKLGEGGYGPVYKVTA 677 (866)
Q Consensus 647 ~~~~~~~~~~dF~~~~~lg~g~~g~vy~~~~ 677 (866)
..+++.....+|...+.||+|+||.||++..
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~ 43 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVD 43 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEEC
Confidence 3456777889999999999999999999863
No 451
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=23.35 E-value=20 Score=37.73 Aligned_cols=25 Identities=28% Similarity=0.574 Sum_probs=20.7
Q ss_pred HHHhcCCccccccCCCCceeEEEee
Q 038019 652 RSATKDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 652 ~~~~~dF~~~~~lg~g~~g~vy~~~ 676 (866)
.....+|...+.||+|+||.||++.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~ 37 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAE 37 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEE
Confidence 4567899999999999999999986
No 452
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=22.48 E-value=22 Score=37.55 Aligned_cols=20 Identities=35% Similarity=0.415 Sum_probs=17.3
Q ss_pred CCccccccCCCCceeEEEee
Q 038019 657 DFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 657 dF~~~~~lg~g~~g~vy~~~ 676 (866)
.|..-+.||+|+||.||++.
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~ 94 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIAT 94 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEE
T ss_pred hcEEeEEeecCcCeEEEEEE
Confidence 46667889999999999986
No 453
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=21.99 E-value=16 Score=25.08 Aligned_cols=11 Identities=36% Similarity=0.537 Sum_probs=4.2
Q ss_pred EEEEeehHHHH
Q 038019 602 LIVGIAVPLGI 612 (866)
Q Consensus 602 ~~~~i~~~~~~ 612 (866)
++.+++.|+.+
T Consensus 15 I~~~vv~Gv~l 25 (41)
T 2k9y_A 15 VIGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHHH
T ss_pred EEeehhHHHHH
Confidence 33333334433
No 454
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=20.83 E-value=29 Score=35.97 Aligned_cols=21 Identities=29% Similarity=0.506 Sum_probs=18.4
Q ss_pred cCCccccccCCCCceeEEEee
Q 038019 656 KDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 656 ~dF~~~~~lg~g~~g~vy~~~ 676 (866)
.+|...+.||+|+||.||++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~ 33 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGV 33 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEE
T ss_pred hHceeeeeeeecCCceEEEEE
Confidence 467778999999999999986
No 455
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=20.73 E-value=22 Score=35.70 Aligned_cols=23 Identities=39% Similarity=0.720 Sum_probs=20.1
Q ss_pred HhcCCccccccCCCCceeEEEee
Q 038019 654 ATKDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 654 ~~~dF~~~~~lg~g~~g~vy~~~ 676 (866)
++.+|...+.||+|+||.||++.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~ 29 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAR 29 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEE
Confidence 35678888999999999999986
No 456
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=20.70 E-value=30 Score=35.50 Aligned_cols=22 Identities=32% Similarity=0.605 Sum_probs=19.0
Q ss_pred cCCccccccCCCCceeEEEeec
Q 038019 656 KDFNRSNKLGEGGYGPVYKVTA 677 (866)
Q Consensus 656 ~dF~~~~~lg~g~~g~vy~~~~ 677 (866)
.+|.+.+.||+|+||.||++..
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~ 57 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKW 57 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEES
T ss_pred cceEEEeEecCCCCeEEEEEEE
Confidence 4677889999999999999863
No 457
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=20.57 E-value=33 Score=35.05 Aligned_cols=23 Identities=39% Similarity=0.770 Sum_probs=18.9
Q ss_pred HhcCCccccccCCCCceeEEEee
Q 038019 654 ATKDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 654 ~~~dF~~~~~lg~g~~g~vy~~~ 676 (866)
...+|...+.||+|+||.||++.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~ 29 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKAR 29 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEE
T ss_pred cccceEEEEEEecCCCeEEEEEE
Confidence 35688899999999999999987
No 458
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=20.43 E-value=27 Score=36.95 Aligned_cols=23 Identities=22% Similarity=0.583 Sum_probs=19.0
Q ss_pred hcCCccccccCCCCceeEEEeec
Q 038019 655 TKDFNRSNKLGEGGYGPVYKVTA 677 (866)
Q Consensus 655 ~~dF~~~~~lg~g~~g~vy~~~~ 677 (866)
..+|.+.+.||+|+||.||++..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~ 56 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADM 56 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEE
T ss_pred CCeEEEEEEEecCCCeEEEEeee
Confidence 45788899999999999999963
No 459
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=20.22 E-value=29 Score=36.96 Aligned_cols=24 Identities=29% Similarity=0.623 Sum_probs=18.8
Q ss_pred HHhcCCccccccCCCCceeEEEee
Q 038019 653 SATKDFNRSNKLGEGGYGPVYKVT 676 (866)
Q Consensus 653 ~~~~dF~~~~~lg~g~~g~vy~~~ 676 (866)
....+|...+.||+|+||.||++.
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~ 27 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVF 27 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEE
T ss_pred cccceEEEEEEEEeccCEEEEEEE
Confidence 345678889999999999999986
Done!