Query 038027
Match_columns 167
No_of_seqs 128 out of 1594
Neff 11.0
Searched_HMMs 29240
Date Mon Mar 25 11:16:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038027.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038027hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nxu_A Cytochrome P450 3A4; al 99.9 3.2E-24 1.1E-28 159.4 10.6 128 29-163 12-140 (485)
2 3swz_A Steroid 17-alpha-hydrox 99.9 6.1E-24 2.1E-28 158.4 10.2 135 27-164 4-142 (494)
3 3s79_A Cytochrome P450 19A1; o 99.9 4.5E-24 1.5E-28 159.3 7.3 135 25-163 39-177 (503)
4 3tbg_A Cytochrome P450 2D6; mo 99.9 7.7E-23 2.6E-27 151.7 12.6 130 31-163 10-144 (479)
5 3pm0_A Cypib1, cytochrome P450 99.9 2E-23 6.9E-28 155.8 9.5 135 26-164 4-144 (507)
6 3qz1_A Steroid 21-hydroxylase; 99.9 5.9E-23 2E-27 153.0 7.9 127 28-163 26-153 (496)
7 3ld6_A Lanosterol 14-alpha dem 99.9 3E-23 1E-27 153.6 3.8 130 31-164 11-141 (461)
8 3k9v_A 1,25-dihydroxyvitamin D 99.9 3.6E-22 1.2E-26 148.1 9.2 135 27-164 20-161 (482)
9 1po5_A Cytochrome P450 2B4; ox 99.9 1.9E-21 6.5E-26 144.4 13.0 132 28-164 7-141 (476)
10 3e6i_A CYPIIE1, P450-J, cytoch 99.9 2.9E-21 9.8E-26 143.2 12.4 131 28-164 7-140 (476)
11 2fdv_A Cytochrome P450 2A6; CY 99.9 2.5E-21 8.6E-26 143.8 10.4 130 30-164 9-141 (476)
12 2hi4_A Cytochrome P450 1A2; CY 99.9 3.5E-21 1.2E-25 143.6 11.2 129 31-163 16-154 (495)
13 3czh_A Cytochrome P450 2R1; vi 99.8 2E-21 6.7E-26 144.6 8.2 134 27-164 8-146 (481)
14 3i3k_A Lanosterol 14-alpha dem 99.8 3.8E-22 1.3E-26 147.5 3.8 131 29-163 9-140 (461)
15 3gw9_A Sterol 14alpha-demethyl 99.8 9.2E-22 3.1E-26 144.8 5.8 128 30-162 2-132 (450)
16 2ij2_A Cytochrome P450 BM3; mo 99.8 1.1E-20 3.9E-25 140.1 10.9 128 31-163 3-132 (470)
17 1r9o_A Cytochrome P450 2C9; mo 99.8 5.1E-21 1.7E-25 142.1 8.3 129 31-164 11-142 (477)
18 2ve3_A Putative cytochrome P45 99.8 8.6E-21 2.9E-25 139.8 7.6 129 28-163 9-137 (444)
19 2cd8_A Cytochrome P450 monooxy 99.8 2.2E-20 7.4E-25 137.5 9.4 130 27-163 22-156 (436)
20 3n9y_A Cholesterol SIDE-chain 99.8 2.5E-20 8.7E-25 138.5 8.7 135 26-164 4-145 (487)
21 3v8d_A Cholesterol 7-alpha-mon 99.8 2.4E-21 8.1E-26 144.4 1.8 131 24-160 6-138 (491)
22 2cib_A Cytochrome P450 51; hem 99.8 1.5E-19 5E-24 133.6 8.5 125 31-162 4-129 (455)
23 3dbg_A Putative cytochrome P45 99.8 3.4E-20 1.2E-24 137.4 4.7 125 30-163 22-148 (467)
24 1jfb_A Nitric-oxide reductase 99.7 1.8E-17 6.3E-22 120.7 12.6 126 32-164 2-132 (404)
25 1izo_A P450bsbeta, cytochrome 99.7 1.1E-17 3.7E-22 122.4 7.6 119 39-163 8-128 (417)
26 1n97_A CYP175A1; electron tran 99.7 7.1E-19 2.4E-23 127.7 1.2 121 34-162 2-122 (389)
27 3awm_A Fatty acid alpha-hydrox 99.7 1.8E-17 6.1E-22 121.2 8.5 122 33-163 4-127 (415)
28 3dax_A Cytochrome P450 7A1; ch 99.7 9.7E-19 3.3E-23 130.1 1.3 129 27-161 9-139 (491)
29 2zbx_A Cytochrome P450-SU1; be 99.7 3.3E-16 1.1E-20 114.5 13.8 126 31-163 5-139 (412)
30 1ued_A P450 OXYC, P450 monooxy 99.7 1.2E-16 4E-21 116.7 10.9 123 30-163 9-141 (406)
31 3mdm_A Cholesterol 24-hydroxyl 99.7 1.4E-16 4.8E-21 117.5 10.3 113 49-164 9-123 (456)
32 3b6h_A Prostacyclin synthase; 99.7 5E-17 1.7E-21 121.2 6.3 127 27-161 14-141 (498)
33 3b98_A Prostaglandin I2 syntha 99.7 7.7E-18 2.6E-22 124.8 1.4 129 25-162 12-141 (475)
34 1s1f_A Putative cytochrome P45 99.7 8.9E-16 3E-20 112.0 11.6 125 31-163 8-137 (406)
35 3abb_A CYP105D6, cytochrome P4 99.6 3E-15 1E-19 109.2 12.3 110 47-163 21-138 (408)
36 3ivy_A Cytochrome P450 CYP125; 99.6 2.9E-15 1E-19 110.1 12.1 127 31-163 18-160 (433)
37 3dsk_A Cytochrome P450 74A, ch 99.6 2.9E-16 1E-20 117.0 6.4 131 28-163 25-172 (495)
38 3oo3_A OXY protein; cytochrome 99.6 2.5E-15 8.4E-20 108.8 10.8 110 49-164 11-124 (384)
39 3aba_A Cytochrome P450; oxidor 99.6 1.4E-14 4.9E-19 105.6 12.3 109 48-163 17-131 (403)
40 3a4g_A Vitamin D hydroxylase; 99.6 1.4E-14 4.6E-19 105.9 11.5 111 48-163 18-131 (411)
41 1cpt_A Cytochrome P450-TERP; o 99.6 7E-15 2.4E-19 108.0 9.4 126 30-164 5-147 (428)
42 4fb2_A P450CIN; heme, monooxyg 99.6 5.9E-15 2E-19 107.4 8.9 111 48-164 17-129 (398)
43 3tyw_A Putative cytochrome P45 99.6 3.1E-14 1.1E-18 104.2 12.5 111 49-164 28-144 (417)
44 2y5n_A MYCG, P-450-like protei 99.6 1.8E-14 6E-19 105.6 10.4 109 48-163 35-147 (417)
45 3ejb_B Biotin biosynthesis cyt 99.6 1E-14 3.4E-19 106.3 9.0 111 49-163 12-124 (404)
46 3dan_A Cytochrome P450 74A2; A 99.6 5.6E-15 1.9E-19 109.4 7.7 131 28-163 6-154 (473)
47 1z8o_A 6-deoxyerythronolide B 99.6 2.6E-14 8.8E-19 104.2 10.3 109 49-162 13-133 (404)
48 2zwu_A Camphor 5-monooxygenase 99.5 1E-14 3.4E-19 106.8 7.4 127 28-163 8-145 (415)
49 2xbk_A PIMD protein; epoxidati 99.5 8.7E-14 3E-18 101.5 12.1 108 49-163 25-141 (404)
50 2z36_A MOXA, cytochrome P450 t 99.5 6.1E-14 2.1E-18 102.6 10.9 125 31-163 7-139 (413)
51 1odo_A Putative cytochrome P45 99.5 1.6E-14 5.6E-19 105.4 7.9 112 47-163 12-131 (408)
52 2jjn_A Cytochrome P450 113A1; 99.5 2.1E-14 7.1E-19 104.9 8.1 113 28-160 16-128 (411)
53 2uuq_A CYP130, cytochrome P450 99.5 9.6E-14 3.3E-18 101.6 10.3 108 49-164 24-141 (414)
54 3oft_A Cytochrome P450, CYP101 99.5 4E-14 1.4E-18 102.9 8.1 110 48-164 22-131 (396)
55 2dkk_A Cytochrome P450; CYP158 99.5 1.1E-13 3.7E-18 101.2 10.3 111 49-164 26-141 (411)
56 3lxh_A Cytochrome P450; heme, 99.5 4.8E-14 1.6E-18 103.3 7.9 109 49-163 37-146 (421)
57 2wm5_A CYP124, putative cytoch 99.5 6.3E-14 2.2E-18 103.1 8.4 111 50-164 44-162 (435)
58 3mgx_A Putative P450 monooxyge 99.5 9.8E-14 3.3E-18 101.6 8.2 110 49-163 36-150 (415)
59 1gwi_A CYP154C1, cytochrome P4 99.5 2E-13 6.8E-18 99.8 9.6 110 48-162 15-135 (411)
60 2z3t_A Cytochrome P450; monoxy 99.5 2E-13 6.8E-18 100.2 8.7 110 49-163 19-142 (425)
61 3tkt_A Cytochrome P450; aromat 99.4 2.8E-13 9.5E-18 100.1 8.7 106 52-163 47-168 (450)
62 1q5d_A P450 epoxidase; cytochr 99.4 1.5E-13 5E-18 100.7 6.3 107 49-163 25-139 (419)
63 2xkr_A CYP142, putative cytoch 99.4 4.4E-13 1.5E-17 97.5 8.4 103 49-163 17-119 (398)
64 3nc3_A Cytochrome P450 CYPX; c 99.4 1.2E-13 4.2E-18 101.8 5.3 105 50-163 53-157 (441)
65 4dnj_A Putative cytochrome P45 99.4 2.6E-12 8.8E-17 93.9 11.0 123 37-164 18-144 (412)
66 1lfk_A OXYB, P450 monooxygenas 99.4 6.8E-13 2.3E-17 96.5 7.4 104 55-163 18-132 (398)
67 1n40_A P450 MT2, cytochrome P4 99.4 6.5E-13 2.2E-17 96.6 6.0 105 48-163 14-126 (396)
68 3rwl_A Cytochrome P450 alkane 99.4 4.8E-12 1.6E-16 92.9 10.2 109 49-162 37-154 (426)
69 3r9b_A Cytochrome P450 164A2; 99.3 2.7E-12 9.1E-17 93.9 7.6 105 49-162 28-139 (418)
70 1io7_A Cytochrome P450 CYP119; 99.3 4.3E-12 1.5E-16 91.4 8.3 102 52-161 1-110 (368)
71 3buj_A CALO2; heme, iron, meta 99.3 1.3E-12 4.4E-17 95.0 5.0 106 50-163 13-123 (397)
72 2rfb_A Cytochrome P450; heme, 99.2 8.1E-12 2.8E-16 89.2 5.3 88 61-161 2-89 (343)
73 3b4x_A 367AA long hypothetical 99.2 2.6E-11 8.9E-16 87.3 7.4 101 52-162 1-109 (367)
74 3p3o_A Cytochrome P450; monoox 99.1 1.8E-11 6.3E-16 89.5 2.6 107 49-161 32-142 (416)
75 2wiy_A XPLA-heme, cytochrome P 99.0 2.8E-10 9.5E-15 82.7 5.2 103 50-162 20-122 (394)
76 4dxy_A Cytochrome P450, CYP101 99.0 3.1E-09 1E-13 77.8 10.4 110 49-164 36-146 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 97.5 3.5E-07 1.2E-11 66.2 -8.8 109 32-162 35-153 (381)
78 1s79_A Lupus LA protein; RRM, 65.7 16 0.00054 20.6 6.6 49 41-91 15-71 (103)
79 1iqt_A AUF1, heterogeneous nuc 62.5 14 0.00048 19.0 5.4 40 52-91 12-60 (75)
80 2krb_A Eukaryotic translation 59.2 18 0.00061 19.0 6.6 39 53-91 21-66 (81)
81 3s6e_A RNA-binding protein 39; 52.5 23 0.0008 20.5 3.9 66 33-98 3-82 (114)
82 2mss_A Protein (musashi1); RNA 50.5 24 0.00084 18.0 5.8 39 52-90 12-59 (75)
83 3beg_B Splicing factor, argini 47.7 38 0.0013 19.3 6.3 56 41-98 20-78 (115)
84 3lqv_A PRE-mRNA branch site pr 47.0 37 0.0013 19.1 7.9 57 33-91 4-66 (115)
85 3s7r_A Heterogeneous nuclear r 44.2 35 0.0012 18.0 4.5 49 41-91 15-72 (87)
86 2pe8_A Splicing factor 45; RRM 43.9 43 0.0015 18.9 5.3 62 36-97 7-82 (105)
87 2diu_A KIAA0430 protein; struc 43.1 45 0.0015 18.9 5.9 49 42-91 14-65 (96)
88 3v4m_A Splicing factor U2AF 65 42.2 46 0.0016 18.8 6.0 45 54-98 30-86 (105)
89 3ue2_A Poly(U)-binding-splicin 41.2 52 0.0018 19.1 5.5 63 37-99 20-99 (118)
90 2nlw_A Eukaryotic translation 38.8 51 0.0017 18.3 7.4 52 40-91 18-80 (105)
91 3ezh_A Nitrate/nitrite sensor 38.7 60 0.0021 19.1 4.4 42 123-165 66-108 (125)
92 3pgw_S U1-70K; protein-RNA com 36.4 1.2E+02 0.004 22.3 6.3 50 40-91 105-163 (437)
93 3d2w_A TAR DNA-binding protein 34.4 56 0.0019 17.5 6.0 46 41-88 15-64 (89)
94 3ex7_B RNA-binding protein 8A; 33.9 68 0.0023 18.4 6.4 54 41-96 26-89 (126)
95 1whv_A Poly(A)-specific ribonu 33.4 69 0.0024 18.3 6.3 40 52-91 28-68 (100)
96 4f25_A Polyadenylate-binding p 32.1 72 0.0025 18.1 6.0 49 41-91 9-64 (115)
97 2dnh_A Bruno-like 5, RNA bindi 32.0 66 0.0023 17.6 5.5 49 41-91 19-75 (105)
98 2cq4_A RNA binding motif prote 31.8 71 0.0024 17.9 4.9 47 42-90 30-85 (114)
99 2d9o_A DNAJ (HSP40) homolog, s 31.3 72 0.0025 17.8 5.6 40 52-91 30-73 (100)
100 2dgs_A DAZ-associated protein 30.9 67 0.0023 17.4 6.9 54 41-96 14-76 (99)
101 2cpf_A RNA binding motif prote 30.1 69 0.0024 17.3 5.9 49 41-91 9-69 (98)
102 1sjr_A Polypyrimidine tract-bi 29.8 1E+02 0.0036 19.2 7.3 48 42-91 51-103 (164)
103 3ctr_A Poly(A)-specific ribonu 29.5 56 0.0019 18.7 2.9 40 52-91 18-58 (101)
104 1x5p_A Negative elongation fac 29.0 73 0.0025 17.2 5.5 47 41-91 19-68 (97)
105 1x4b_A Heterogeneous nuclear r 28.3 84 0.0029 17.6 4.9 49 41-91 31-88 (116)
106 2hvz_A Splicing factor, argini 28.2 77 0.0026 17.2 6.5 40 52-91 13-56 (101)
107 2dgu_A Heterogeneous nuclear r 28.1 79 0.0027 17.3 6.7 49 41-91 15-64 (103)
108 2dgv_A HnRNP M, heterogeneous 28.1 73 0.0025 16.9 6.0 49 41-91 12-67 (92)
109 2fy1_A RNA-binding motif prote 28.0 88 0.003 17.8 5.6 49 41-91 11-67 (116)
110 2do4_A Squamous cell carcinoma 28.0 78 0.0027 17.2 5.0 49 41-91 21-77 (100)
111 2bz2_A Negative elongation fac 27.9 91 0.0031 17.9 4.1 41 51-91 49-92 (121)
112 2voo_A Lupus LA protein; RNA-b 27.8 1.2E+02 0.0041 19.2 5.1 48 42-91 114-169 (193)
113 4fxv_A ELAV-like protein 1; RN 27.7 82 0.0028 17.3 5.9 49 41-91 23-80 (99)
114 4b19_A PEPA1; toxin, toxin apo 27.7 13 0.00045 16.0 0.0 11 15-25 15-25 (30)
115 1wf0_A TDP-43, TAR DNA-binding 27.6 74 0.0025 16.8 3.6 46 41-88 9-58 (88)
116 1oo0_B CG8781-PA, drosophila Y 27.2 85 0.0029 17.4 6.8 49 41-91 30-87 (110)
117 3s8s_A Histone-lysine N-methyl 27.1 90 0.0031 17.6 5.9 49 41-91 10-67 (110)
118 2dh8_A DAZ-associated protein 27.0 84 0.0029 17.2 4.8 51 41-93 20-79 (105)
119 1p27_B RNA-binding protein 8A; 27.0 84 0.0029 17.2 6.7 49 41-91 27-84 (106)
120 2dgt_A RNA-binding protein 30; 26.3 81 0.0028 16.8 6.5 49 41-91 14-63 (92)
121 1rk8_A CG8781-PA, CG8781-PA pr 26.0 1.2E+02 0.004 18.5 6.0 49 41-91 76-133 (165)
122 2jwn_A Embryonic polyadenylate 25.6 99 0.0034 17.6 4.7 39 51-89 48-95 (124)
123 1whx_A Hypothetical protein ri 25.2 98 0.0033 17.4 6.4 55 41-97 14-72 (111)
124 1x4c_A Splicing factor, argini 25.0 96 0.0033 17.2 7.3 49 41-91 19-69 (108)
125 2cpi_A CCR4-NOT transcription 24.4 80 0.0028 17.7 3.1 49 41-91 19-82 (111)
126 2cph_A RNA binding motif prote 24.2 96 0.0033 17.0 7.4 49 41-91 19-77 (107)
127 1x4e_A RNA binding motif, sing 24.2 84 0.0029 16.3 5.3 48 41-90 9-65 (85)
128 1uaw_A Mouse-musashi-1; RNP-ty 24.2 79 0.0027 15.9 4.4 41 52-92 13-62 (77)
129 2cq0_A Eukaryotic translation 24.2 90 0.0031 17.0 3.2 49 41-91 19-76 (103)
130 1nu4_A U1A RNA binding domain; 23.9 93 0.0032 16.6 5.9 49 41-91 12-70 (97)
131 2err_A Ataxin-2-binding protei 23.8 1E+02 0.0035 17.1 4.0 48 42-91 34-88 (109)
132 2jvr_A Nucleolar protein 3; RN 23.7 1.1E+02 0.0038 17.4 6.2 49 41-91 32-86 (111)
133 2cpz_A CUG triplet repeat RNA- 23.6 1.1E+02 0.0036 17.2 5.4 49 41-91 29-86 (115)
134 2cqc_A Arginine/serine-rich sp 22.4 98 0.0034 16.4 6.8 50 40-91 18-76 (95)
135 2xs2_A Deleted in azoospermia- 22.2 73 0.0025 17.3 2.6 48 41-90 13-68 (102)
136 2dit_A HIV TAT specific factor 21.3 1.2E+02 0.0041 17.0 4.7 38 54-91 41-83 (112)
137 2jvo_A Nucleolar protein 3; nu 21.2 1.2E+02 0.0041 16.9 6.1 48 42-91 36-84 (108)
138 2cqi_A Nucleolysin TIAR; RNA r 21.0 1.1E+02 0.0039 16.6 6.5 48 41-90 19-73 (103)
139 1l3k_A Heterogeneous nuclear r 20.8 1.6E+02 0.0053 18.1 5.7 50 41-92 17-75 (196)
140 2zdj_A Hypothetical protein TT 20.7 59 0.002 16.7 1.6 18 74-91 12-29 (69)
141 3zzy_A Polypyrimidine tract-bi 20.7 1.4E+02 0.005 17.7 4.9 47 42-90 33-84 (130)
142 2xnq_A Nuclear polyadenylated 20.5 1.2E+02 0.004 16.5 6.2 50 41-91 26-76 (97)
143 1sjq_A Polypyrimidine tract-bi 20.5 1.3E+02 0.0044 17.1 7.1 52 37-90 16-70 (105)
No 1
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.91 E-value=3.2e-24 Score=159.39 Aligned_cols=128 Identities=23% Similarity=0.312 Sum_probs=108.5
Q ss_pred CCCCCCCCCCCccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhc-ccccCCCCCcccccc
Q 038027 29 RKGLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEH-DSLFCDRKVPESILS 107 (167)
Q Consensus 29 ~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~-~~~~~~~~~~~~~~~ 107 (167)
+.+.+|||+++|++||++.+..+++..+.+|+++||||+++++++.++++++||+++++|+.++ ...|.+++.....
T Consensus 12 k~~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~-- 89 (485)
T 3nxu_A 12 KKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPV-- 89 (485)
T ss_dssp HHHTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCC--
T ss_pred hhCCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccc--
Confidence 3467899999999999999877888999999999999999999999999999999999999876 4566665543332
Q ss_pred CccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 108 QPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 108 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
. ..+.++ +..+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 90 ~---~~~~~l-~~~~g~~w~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~ 140 (485)
T 3nxu_A 90 G---FMKSAI-SIAEDEEWKRLRSLL-SPTFTSGKLKEMVPIIAQYGDVLVRNLRR 140 (485)
T ss_dssp G---GGGGST-TTCCHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c---ccccCc-cccCCcHHHHHHhhc-ChhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 223444 444599999999999 79999999999999999999999999865
No 2
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=99.90 E-value=6.1e-24 Score=158.36 Aligned_cols=135 Identities=22% Similarity=0.355 Sum_probs=109.0
Q ss_pred CCCCCCCCCCCCCccccccccCC--CCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccc
Q 038027 27 GKRKGLPPGPRPYPVIGNLLELG--GKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPES 104 (167)
Q Consensus 27 ~~~~~~~pgp~~~p~~g~~~~~~--~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~ 104 (167)
++..+.||||+++|++||++.+. ++++..+.+|+++||||+++++++.++++++||+++++++.+++..|.+++....
T Consensus 4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~ 83 (494)
T 3swz_A 4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83 (494)
T ss_dssp --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 34457889999999999999883 4678899999999999999999999999999999999999988889988876654
Q ss_pred cccCccccCCcceeeCCCChHHHHHHhHhhhccCch--hhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 105 ILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTN--QKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~--~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
. ..++..+.+++++.+|+.|+++|+++ ++.|+. ..++.+.+.+.++++++++.+.+.
T Consensus 84 ~--~~~~~~~~gl~~~~~g~~wr~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 142 (494)
T 3swz_A 84 L--DIASNNRKGIAFADSGAHWQLHRRLA-MATFALFKDGDQKLEKIICQEISTLCDMLATH 142 (494)
T ss_dssp H--HHHTTTTCSSSSSCSSHHHHHHHHHH-HHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHT
T ss_pred H--HHhccCCCCeEeCCCCHHHHHHHHHH-HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHc
Confidence 4 44444456777777799999999999 799974 456788999999999999988753
No 3
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.90 E-value=4.5e-24 Score=159.26 Aligned_cols=135 Identities=21% Similarity=0.232 Sum_probs=105.7
Q ss_pred hcCCCCCCCCCCCCCccccccccCC----CCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCC
Q 038027 25 SSGKRKGLPPGPRPYPVIGNLLELG----GKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRK 100 (167)
Q Consensus 25 ~~~~~~~~~pgp~~~p~~g~~~~~~----~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~ 100 (167)
+.+++.+.||||+++|++||++.+. ...+..+.+|+++||||+++++++.++++++||+++++++.+ ..|.+++
T Consensus 39 ~~~~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~ 116 (503)
T 3s79_A 39 WNYEGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKH--NHYSSRF 116 (503)
T ss_dssp ------CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCC
T ss_pred HHHhccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcc
Confidence 3345568899999999999998862 245567889999999999999999999999999999999954 3566654
Q ss_pred CccccccCccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 101 VPESILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
..... ....+..+.+++++.+|+.|+++|+++ ++.|+...++.+.+.+.+++.++++.+.+
T Consensus 117 ~~~~~-~~~~~~~~~~~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~~l~~l~~ 177 (503)
T 3s79_A 117 GSKLG-LQCIGMHEKGIIFNNNPELWKTTRPFF-MKALSGPGLVRMVTVCAESLKTHLDRLEE 177 (503)
T ss_dssp CCHHH-HHHHTCTTSSSTTCCCHHHHHHHHHHH-HHHTSTHHHHHHHHHHHHHHHHHHTTGGG
T ss_pred hhhhh-hhhhccCCCceeeCCCccHHHHHHHhh-hHhhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43221 022233456777777799999999999 79999999999999999999999988765
No 4
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.89 E-value=7.7e-23 Score=151.67 Aligned_cols=130 Identities=24% Similarity=0.343 Sum_probs=105.3
Q ss_pred CCCCCCCCCccccccccC-CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCc
Q 038027 31 GLPPGPRPYPVIGNLLEL-GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQP 109 (167)
Q Consensus 31 ~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~ 109 (167)
+.||||+++|++||++.+ ..+++..+.+|+++||||+++++++.++++++||+++++|+.+++..|.+++..... ..
T Consensus 10 kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~--~~ 87 (479)
T 3tbg_A 10 KLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPIT--QI 87 (479)
T ss_dssp CCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGG--GG
T ss_pred CCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHH--HH
Confidence 678999999999999988 577888999999999999999999999999999999999999888888888766554 33
Q ss_pred c--ccCCcceeeCCCChHHHHHHhHhhhccCchhhHHH--hHHHHHHHHHHHHHHHHH
Q 038027 110 Y--QHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDA--NQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 110 ~--~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~--~~~~~~~~~~~~~~~l~~ 163 (167)
+ +..+.+++++.+|+.|+++|+.+ .+.|+...+.. +.+.+......+.+.+..
T Consensus 88 ~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 144 (479)
T 3tbg_A 88 LGFGPRSQGVFLARYGPAWREQRRFS-VSTLRNLGLGKKSLEQWVTEEAACLCAAFAN 144 (479)
T ss_dssp GTCBTTBCCSTTCCSSHHHHHHHHHH-HHHHHHTTSTTCHHHHHHHHHHHHHHHHHHT
T ss_pred hccCCCCCceeeCCCCHHHHHHHHHH-HHHhcchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 3 23346677777899999999999 69998777653 445555556665555543
No 5
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=99.89 E-value=2e-23 Score=155.83 Aligned_cols=135 Identities=26% Similarity=0.410 Sum_probs=92.3
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCcccc
Q 038027 26 SGKRKGLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESI 105 (167)
Q Consensus 26 ~~~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~ 105 (167)
++++.+.||||+++|++|+++.+..+++..+.+|+++||+|+++++++.++++++||+++++|+.++...|.+++.....
T Consensus 4 ~~~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~ 83 (507)
T 3pm0_A 4 KTSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASF 83 (507)
T ss_dssp ------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHH
T ss_pred ccCCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHH
Confidence 44556889999999999999998888999999999999999999999999999999999999998888888877765543
Q ss_pred ccCccccCCcceeeCCCChHHHHHHhHhhhccCchhhH------HHhHHHHHHHHHHHHHHHHHh
Q 038027 106 LSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKL------DANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 106 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l------~~~~~~~~~~~~~~~~~l~~~ 164 (167)
.... .+.+++++.+|+.|+++|+++ ++.|+.... +.+.+.+.++++++++.+.+.
T Consensus 84 --~~~~-~g~~l~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 144 (507)
T 3pm0_A 84 --RVVS-GGRSMAFGHYSEHWKVQRRAA-HSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRG 144 (507)
T ss_dssp --HHGG-GGTCSSSSCSSHHHHHHHHHH-HHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred --Hhhc-CCCceEECCCChHHHHHHHHH-HHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 2222 356776777799999999999 687765443 338899999999999998764
No 6
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=99.88 E-value=5.9e-23 Score=153.01 Aligned_cols=127 Identities=18% Similarity=0.188 Sum_probs=101.1
Q ss_pred CCCCCCCCCCCCccccccccC-CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccc
Q 038027 28 KRKGLPPGPRPYPVIGNLLEL-GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESIL 106 (167)
Q Consensus 28 ~~~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~ 106 (167)
++.+.||||++ ++.+ .++++..+.+|+++||||+++++++.++++++||+++++|+.++...|.+++.....
T Consensus 26 ~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~- 98 (496)
T 3qz1_A 26 RNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSY- 98 (496)
T ss_dssp ---CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTT-
T ss_pred cCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchH-
Confidence 44578899886 3333 578999999999999999999999999999999999999998887788877665443
Q ss_pred cCccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 107 SQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 107 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
........+++++++|+.|+++|+++ ++.|+.+.++.+.+.+.++++++++.+.+
T Consensus 99 -~~~~~~~~~l~~~~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l~~ 153 (496)
T 3qz1_A 99 -KLVSQRCQDISLGDYSLLWKAHKKLT-RSALLLGTRSSMEPWVDQLTQEFCERMRV 153 (496)
T ss_dssp -TTSCTTCCCSSSSCCSHHHHHHHHHH-HHHHHC--CCCHHHHHHHHHHHHHHHHHT
T ss_pred -HHhcCCCCceEECCCCHHHHHHHHHH-HHHHhhccHhhHHHHHHHHHHHHHHHHHh
Confidence 22221223666665699999999999 79999777788999999999999999975
No 7
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.87 E-value=3e-23 Score=153.56 Aligned_cols=130 Identities=14% Similarity=0.205 Sum_probs=109.5
Q ss_pred CCCCCCCC-CccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCc
Q 038027 31 GLPPGPRP-YPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQP 109 (167)
Q Consensus 31 ~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~ 109 (167)
+.||+|++ +|++||++.+..+++.++.+++++||||+++++++.++++++||+++++++.+++..|.+++.........
T Consensus 11 ~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~~ 90 (461)
T 3ld6_A 11 KSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPV 90 (461)
T ss_dssp CCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHHH
T ss_pred CCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhcc
Confidence 56788775 99999999988889999999999999999999999999999999999999988777776654333221011
Q ss_pred cccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 110 YQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 110 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
.|.+++++.+|+.|+++|+++ ++.|+...++.+.+.+.++++++++.+.+.
T Consensus 91 ---~g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~ 141 (461)
T 3ld6_A 91 ---FGKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGES 141 (461)
T ss_dssp ---HCTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCSE
T ss_pred ---CCCccccCCCcHHHHHHHHhc-cccccHHHHhhhhHHHHHHHHHHHHHHhhc
Confidence 256777777799999999999 799999999999999999999998887543
No 8
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.87 E-value=3.6e-22 Score=148.14 Aligned_cols=135 Identities=23% Similarity=0.383 Sum_probs=107.5
Q ss_pred CCCCCCCCCCCCCccccccccC-----CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCC
Q 038027 27 GKRKGLPPGPRPYPVIGNLLEL-----GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKV 101 (167)
Q Consensus 27 ~~~~~~~pgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~ 101 (167)
.++.+.+|||+++|++||++.+ .++++..+.+|+++||||+++++++.++++++||+++++|+.+ ...|.+++.
T Consensus 20 ~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~-~~~~~~r~~ 98 (482)
T 3k9v_A 20 TRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRT-ESAHPQRLE 98 (482)
T ss_dssp CEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHT-CCSSCCCCC
T ss_pred cCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHh-cCCCCCCCC
Confidence 3456889999999999999876 1357888999999999999999999999999999999999987 456777654
Q ss_pred cccc-ccCccccCCcceeeCCCChHHHHHHhHhhhccC-chhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 102 PESI-LSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIF-TNQKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 102 ~~~~-~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f-s~~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
.... .+......+.++++. +|+.|+++|+.+ ++.| +.+.++.+.+.+.++++++++.+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~-~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~ 161 (482)
T 3k9v_A 99 IKPWKAYRDHRNEAYGLMIL-EGQEWQRVRSAF-QKKLMKPVEIMKLDKKINEVLADFLERMDEL 161 (482)
T ss_dssp CHHHHHHHHHHTCCCCTTTC-CHHHHHHHHHHH-HHHHTCHHHHGGGHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHhcCCCCCceeC-CCchHHHHHHHh-hHHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3321 001111124555544 599999999999 6876 78889999999999999999999764
No 9
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=99.87 E-value=1.9e-21 Score=144.41 Aligned_cols=132 Identities=21% Similarity=0.453 Sum_probs=107.5
Q ss_pred CCCCCCCCCCCCccccccccC-CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccc
Q 038027 28 KRKGLPPGPRPYPVIGNLLEL-GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESIL 106 (167)
Q Consensus 28 ~~~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~ 106 (167)
++.+.||||+++|++|+++.+ ..+++..+.+++++||||+++++++.++++++||+++++|+.++...|.+++.....
T Consensus 7 ~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~- 85 (476)
T 1po5_A 7 SKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVV- 85 (476)
T ss_dssp --CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGG-
T ss_pred CCCCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHH-
Confidence 334778999999999999988 678899999999999999999999999999999999999997766677765543222
Q ss_pred cCccccCCcceeeCCCChHHHHHHhHhhhccCchh--hHHHhHHHHHHHHHHHHHHHHHh
Q 038027 107 SQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQ--KLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 107 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~--~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
.... .+.+++++ +|+.|+++|+++ ++.|+.. .++.+.+.+.++++++++.+.+.
T Consensus 86 -~~~~-~~~~l~~~-~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 141 (476)
T 1po5_A 86 -DPIF-QGYGVIFA-NGERWRALRRFS-LATMRDFGMGKRSVEERIQEEARCLVEELRKS 141 (476)
T ss_dssp -CSCC-SSCCCCCS-SHHHHHHHHHHH-HHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -Hhhc-CCCceEec-CCcHHHHHHHHH-HHHHHHhCCChhHHHHHHHHHHHHHHHHHHhc
Confidence 2221 24566555 599999999999 7999887 55788999999999999999754
No 10
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=99.86 E-value=2.9e-21 Score=143.20 Aligned_cols=131 Identities=25% Similarity=0.482 Sum_probs=104.9
Q ss_pred CCCCCCCCCCCCccccccccC-CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccc
Q 038027 28 KRKGLPPGPRPYPVIGNLLEL-GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESIL 106 (167)
Q Consensus 28 ~~~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~ 106 (167)
++.+.||||+++|++||++.+ ..+++..+.+|+++||+|+++++++.++++++||+++++|+.++...|.+++.....
T Consensus 7 ~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~- 85 (476)
T 3e6i_A 7 SKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAF- 85 (476)
T ss_dssp ---CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGG-
T ss_pred CCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchh-
Confidence 344789999999999999998 577899999999999999999999999999999999999999877788776654433
Q ss_pred cCccccCCcceeeCCCChHHHHHHhHhhhccCchhhH--HHhHHHHHHHHHHHHHHHHHh
Q 038027 107 SQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKL--DANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 107 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l--~~~~~~~~~~~~~~~~~l~~~ 164 (167)
.... +.+++++ +|+.|+++|+.. .+.|+...+ +.+.+.+.++++++++.+.+.
T Consensus 86 -~~~~--~~~l~~~-~g~~w~~~Rr~~-~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 140 (476)
T 3e6i_A 86 -HAHR--DRGIIFN-NGPTWKDIRRFS-LTTLRNYGMGKQGNESRIQREAHFLLEALRKT 140 (476)
T ss_dssp -GGGT--TSSSTTC-CSTTHHHHHHHH-HHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTT
T ss_pred -heec--CCCEEec-CCcHHHHHHHHH-HHHHHhcCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 2222 2355554 599999999988 688776544 346788999999999998754
No 11
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=99.85 E-value=2.5e-21 Score=143.75 Aligned_cols=130 Identities=22% Similarity=0.381 Sum_probs=107.0
Q ss_pred CCCCCCCCCCccccccccC-CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccC
Q 038027 30 KGLPPGPRPYPVIGNLLEL-GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQ 108 (167)
Q Consensus 30 ~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~ 108 (167)
.+.||||+++|++|+++.+ ..+++..+.+++++||||+++++++.++++++||+++++|+.++...|.+++..... .
T Consensus 9 ~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~--~ 86 (476)
T 2fdv_A 9 GKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATF--D 86 (476)
T ss_dssp CBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHH--H
T ss_pred CCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHH--h
Confidence 3678999999999999988 577889999999999999999999999999999999999997766677665443222 1
Q ss_pred ccccCCcceeeCCCChHHHHHHhHhhhccCchhhH--HHhHHHHHHHHHHHHHHHHHh
Q 038027 109 PYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKL--DANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 109 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l--~~~~~~~~~~~~~~~~~l~~~ 164 (167)
... .+.+++++ +|+.|+++|+++ ++.|+...+ +.+.+.+.++++++++.+.+.
T Consensus 87 ~~~-~~~~l~~~-~g~~~~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 141 (476)
T 2fdv_A 87 WVF-KGYGVVFS-NGERAKQLRRFS-IATLRDFGVGKRGIEERIQEEAGFLIDALRGT 141 (476)
T ss_dssp HHH-TTCSSSSC-CHHHHHHHHHHH-HHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhc-CCCCeEec-CchHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHhc
Confidence 111 24565555 599999999999 799998877 789999999999999999754
No 12
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=99.85 E-value=3.5e-21 Score=143.65 Aligned_cols=129 Identities=22% Similarity=0.419 Sum_probs=104.4
Q ss_pred CCCCCCCCCccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCcc
Q 038027 31 GLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPY 110 (167)
Q Consensus 31 ~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 110 (167)
..+|||+++|++|+++.+..+++..+.+++++||||+++++++.++++++||+++++|+.++...|.+++..... ...
T Consensus 16 p~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~--~~~ 93 (495)
T 2hi4_A 16 KSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTS--TLI 93 (495)
T ss_dssp BCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHH--HTS
T ss_pred CCCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHH--HHh
Confidence 445999999999999888778899999999999999999999999999999999999998776678776644322 222
Q ss_pred ccCCcceeeC-CCChHHHHHHhHhhhccCch---hhH---H---HhHHHHHHHHHHHHHHHHH
Q 038027 111 QHHEFSLVWL-PVSPLWRSLRKICNMHIFTN---QKL---D---ANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 111 ~~~~~~~~~~-~~g~~w~~~R~~~~~~~fs~---~~l---~---~~~~~~~~~~~~~~~~l~~ 163 (167)
. .+.+++++ ++|+.|+++|+++ ++.|+. .+. + .+.+.+.++++++++.+.+
T Consensus 94 ~-~~~~l~~~~~~g~~w~~~Rr~~-~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 154 (495)
T 2hi4_A 94 T-DGQSLTFSTDSGPVWAARRRLA-QNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQE 154 (495)
T ss_dssp T-TSCCTTTSSCCSHHHHHHHHHH-HHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHH
T ss_pred c-CCCCEEEcCCCChHHHHHHHHH-HHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHH
Confidence 1 24566666 4699999999999 798653 332 2 6889999999999999875
No 13
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=99.85 E-value=2e-21 Score=144.58 Aligned_cols=134 Identities=25% Similarity=0.385 Sum_probs=105.5
Q ss_pred CCCCCCCCCCCCCccccccccCC-CC--chHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCcc
Q 038027 27 GKRKGLPPGPRPYPVIGNLLELG-GK--PHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPE 103 (167)
Q Consensus 27 ~~~~~~~pgp~~~p~~g~~~~~~-~~--~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~ 103 (167)
+++.+.||||+++|++|+++.+. .. ++..+.+++++||||+++++++.++++++||+++++|+.++...|.+++...
T Consensus 8 ~~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~ 87 (481)
T 3czh_A 8 RRPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP 87 (481)
T ss_dssp ----CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCH
T ss_pred CCCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcH
Confidence 34457789999999999998773 22 7889999999999999999999999999999999999987766777765432
Q ss_pred ccccCccccCCcceeeCCCChHHHHHHhHhhhccCchhhH--HHhHHHHHHHHHHHHHHHHHh
Q 038027 104 SILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKL--DANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l--~~~~~~~~~~~~~~~~~l~~~ 164 (167)
.. ..+. .+.+++++.+|+.|+++|+++ ++.|+...+ +.+.+.+.++++++++.+.+.
T Consensus 88 ~~--~~~~-~~~~~~~~~~g~~w~~~R~~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 146 (481)
T 3czh_A 88 LF--MKMT-KMGGLLNSRYGRGWVDHRRLA-VNSFRYFGYGQKSFESKILEETKFFNDAIETY 146 (481)
T ss_dssp HH--HHHH-TTCSSTTCCSSHHHHHHHHHH-HHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTT
T ss_pred HH--Hhhc-CCCCeEeCCCChHHHHHHHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 22 2221 123555666799999999999 799987654 678899999999999999754
No 14
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.84 E-value=3.8e-22 Score=147.51 Aligned_cols=131 Identities=15% Similarity=0.218 Sum_probs=107.4
Q ss_pred CCCCCCC-CCCCccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCcccccc
Q 038027 29 RKGLPPG-PRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILS 107 (167)
Q Consensus 29 ~~~~~pg-p~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 107 (167)
..+.||| |+++|++||++.+..+++.++.+++++||||+++++++.+++++++|+++++++.++...+.++........
T Consensus 9 ~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~ 88 (461)
T 3i3k_A 9 GVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTT 88 (461)
T ss_dssp -CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHH
T ss_pred CCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHhhh
Confidence 4478899 889999999998877889999999999999999999999999999999999999876655544322111100
Q ss_pred CccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 108 QPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 108 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
.. .+.++++..+|+.|+++|+++ .+.|+.+.++.+.+.+.+++.++++.|.+
T Consensus 89 ~~---~g~g~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~ll~~l~~ 140 (461)
T 3i3k_A 89 PV---FGKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGE 140 (461)
T ss_dssp HH---HCTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCS
T ss_pred hh---cCCeeeeCCCcHHHHHHHHHH-hhhhCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 11 246777776799999999999 79999999999999999999999988754
No 15
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.84 E-value=9.2e-22 Score=144.85 Aligned_cols=128 Identities=13% Similarity=0.240 Sum_probs=107.5
Q ss_pred CCCCCCCCC-CccccccccCCCCchHHHHHHHHHhC-CeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCcccccc
Q 038027 30 KGLPPGPRP-YPVIGNLLELGGKPHKSLAKLAKIHG-PIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILS 107 (167)
Q Consensus 30 ~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yg-~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 107 (167)
.+.||||++ +|++||++.+..+++..+.+++++|| +++++++++.++++++||+++++++.++...|.+++.....
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~-- 79 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFM-- 79 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGG--
T ss_pred CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHH--
Confidence 467899665 99999998887788999999999999 99999999999999999999999998877777666433222
Q ss_pred CccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHH-HHH
Q 038027 108 QPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLA-YVE 162 (167)
Q Consensus 108 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~-~l~ 162 (167)
.. ..+.++++..+|+.|+++|+.+ ++.|+.++++.+.+.+.++++++++ .+.
T Consensus 80 ~~--~~g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~ 132 (450)
T 3gw9_A 80 VP--VFGEGVAYAAPYPRMREQLNFL-AEELTIAKFQNFVPAIQHEVRKFMAANWD 132 (450)
T ss_dssp HH--HHCTTSGGGSCHHHHHHHHHHH-HHTTSGGGCTTHHHHHHHHHHHHHHHHSC
T ss_pred HH--HhcCCcccCCCcHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11 1246666666799999999999 7999999999999999999999998 554
No 16
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.84 E-value=1.1e-20 Score=140.12 Aligned_cols=128 Identities=20% Similarity=0.223 Sum_probs=102.5
Q ss_pred CCCCCCCCCccccccccC-CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCc
Q 038027 31 GLPPGPRPYPVIGNLLEL-GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQP 109 (167)
Q Consensus 31 ~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~ 109 (167)
+.+|||+++|++|+++.+ ..+++..+.+++++||||+++++++.++++++||+++++|+.+ ..|.+... ... ...
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~--~~f~~~~~-~~~-~~~ 78 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE--SRFDKNLS-QAL-KFV 78 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCT--TTEEECCC-HHH-HHH
T ss_pred CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhh--cCcCcCch-hHH-HHH
Confidence 568999999999999988 4578888999999999999999999999999999999999953 23433221 111 011
Q ss_pred cccCCcceeeC-CCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 110 YQHHEFSLVWL-PVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 110 ~~~~~~~~~~~-~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
....+.+++++ .+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 79 ~~~~~~~l~~~~~~g~~w~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~ 132 (470)
T 2ij2_A 79 RDFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMMVDIAVQLVQKWER 132 (470)
T ss_dssp HHHHTTSGGGSCTTSHHHHHHHHHH-GGGGSTTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCCceEEcCCCchHHHHHHHHh-ccccCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11124566665 4699999999999 79999999999999999999999999875
No 17
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=99.84 E-value=5.1e-21 Score=142.11 Aligned_cols=129 Identities=26% Similarity=0.466 Sum_probs=100.0
Q ss_pred CCCCCCCCCccccccccC-CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCc
Q 038027 31 GLPPGPRPYPVIGNLLEL-GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQP 109 (167)
Q Consensus 31 ~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~ 109 (167)
+.||||+++|++|+++.+ ..+++..+.+++++||||+++++++.++++++||+++++|+.++...|.+++..... ..
T Consensus 11 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~--~~ 88 (477)
T 1r9o_A 11 KLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLA--ER 88 (477)
T ss_dssp BCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCC--CT
T ss_pred CCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhh--hh
Confidence 578999999999999887 456788999999999999999999889999999999999997766677765543222 22
Q ss_pred cccCCcceeeCCCChHHHHHHhHhhhccCchh--hHHHhHHHHHHHHHHHHHHHHHh
Q 038027 110 YQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQ--KLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 110 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~--~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
.. .+.+++++ +|+.|+++|+.+ .+.|+.. .++.+.+.+.++++++++.+.+.
T Consensus 89 ~~-~~~~l~~~-~g~~w~~~Rr~~-~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 142 (477)
T 1r9o_A 89 AN-RGFGIVFS-NGKKWKEIRRFS-LMTLRNFGMGKRSIEDRVQEEARCLVEELRKT 142 (477)
T ss_dssp TT-CTTSSTTC-CHHHHHHHHHHH-HHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTT
T ss_pred cc-CCCceEec-CChHHHHHHHHH-HHHHHHhCCChHHHHHHHHHHHHHHHHHHHhc
Confidence 21 24555555 599999999999 7999887 45678999999999999999753
No 18
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.83 E-value=8.6e-21 Score=139.85 Aligned_cols=129 Identities=19% Similarity=0.198 Sum_probs=102.2
Q ss_pred CCCCCCCCCCCCccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCcccccc
Q 038027 28 KRKGLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILS 107 (167)
Q Consensus 28 ~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 107 (167)
++.+.||||+++|++|+++.+..++. .+.+++++|||+++++++|.++++++||+++++|+.++...|.........
T Consensus 9 ~~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~-- 85 (444)
T 2ve3_A 9 NSLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPLSTR-- 85 (444)
T ss_dssp CCCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCHHHH--
T ss_pred CCCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhHHHH--
Confidence 34578999999999999988744555 778999999999999988999999999999999997765555422111111
Q ss_pred CccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 108 QPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 108 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
..++ ..++++ .+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.|.+
T Consensus 86 ~~~g--~~~l~~-~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~ 137 (444)
T 2ve3_A 86 ILLG--PNALAT-QMGEIHRSRRKIL-YQAFLPRTLDSYLPKMDGIVQGYLEQWGK 137 (444)
T ss_dssp HHHC--TTSGGG-CCHHHHHHHHHHH-HGGGCHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHhC--cccccc-CCchHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1222 125544 4699999999999 79999999999999999999999999853
No 19
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.83 E-value=2.2e-20 Score=137.53 Aligned_cols=130 Identities=15% Similarity=0.208 Sum_probs=94.6
Q ss_pred CCCCCCCCCCCCCccccccc-cCCCCchHHHHHHHHHhCCeeEEEe-CCeeEEEecCHHHHHHHHHhcccccCCCCCccc
Q 038027 27 GKRKGLPPGPRPYPVIGNLL-ELGGKPHKSLAKLAKIHGPIMSLRL-GQVTTVVISSPSMAKAILKEHDSLFCDRKVPES 104 (167)
Q Consensus 27 ~~~~~~~pgp~~~p~~g~~~-~~~~~~~~~~~~~~~~yg~i~~~~~-~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~ 104 (167)
++..+.+|||+++|++|++. .+..+++..+.++ ++||||+++++ ++.++++++||+++++|+.++ .|.+++....
T Consensus 22 ~~~~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~ 98 (436)
T 2cd8_A 22 RRTQQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNST 98 (436)
T ss_dssp ------------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCS
T ss_pred chhccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccc
Confidence 44457899999999999976 4456788999999 89999999997 788899999999999999765 5665543111
Q ss_pred cccCcc---ccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 105 ILSQPY---QHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 105 ~~~~~~---~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
. ... ...+.++++ .+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.|.+
T Consensus 99 ~--~~~~~~~~~~~~l~~-~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~ 156 (436)
T 2cd8_A 99 T--PLTEAEAALNHNMLE-SDPPRHTRLRKLV-AREFTMRRVELLRPRVQEIVDGLVDAMLA 156 (436)
T ss_dssp S--CCCTTGGGTCCSGGG-CCTTHHHHHHHHH-GGGSSHHHHHTTHHHHHHHHHHHHHHHHT
T ss_pred c--ccccccccccccccc-cCchHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 111 112355544 5699999999999 79999999999999999999999999973
No 20
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.82 E-value=2.5e-20 Score=138.53 Aligned_cols=135 Identities=18% Similarity=0.224 Sum_probs=104.2
Q ss_pred cCCCCCCCCCCCCCccccccccC-----CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCC
Q 038027 26 SGKRKGLPPGPRPYPVIGNLLEL-----GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRK 100 (167)
Q Consensus 26 ~~~~~~~~pgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~ 100 (167)
+.++.+.+|||+..++. +++.+ ..+++..+.+|+++||||+++++++.++|+++||+++++|+.++ ..|.+++
T Consensus 4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~ 81 (487)
T 3n9y_A 4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSE-GPNPERF 81 (487)
T ss_dssp CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCCC
T ss_pred CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCCC
Confidence 34556889999987765 55554 13677889999999999999999999999999999999999765 4677766
Q ss_pred Cccccc-cCccccCCcceeeCCCChHHHHHHhHhhhc-cCchhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 101 VPESIL-SQPYQHHEFSLVWLPVSPLWRSLRKICNMH-IFTNQKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 101 ~~~~~~-~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~-~fs~~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
...... +......+.++ ++.+|+.|+++|+++ ++ .|+.++++.+.+.++++++++++.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~l-~~~~g~~w~~~Rr~l-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~ 145 (487)
T 3n9y_A 82 LIPPWVAYHQYYQRPIGV-LLKKSAAWKKDRVAL-NQEVMAPEATKNFLPLLDAVSRDFVSVLHRR 145 (487)
T ss_dssp CCHHHHHHHHHTTCCCCG-GGCCHHHHHHHHHHH-HHHHTSHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHccccCCC-ccCCcHHHHHHHHhc-CcccCCchHHHHhhhHHHHHHHHHHHHHHHH
Confidence 443210 01111123444 445699999999999 68 5999999999999999999999998763
No 21
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.81 E-value=2.4e-21 Score=144.36 Aligned_cols=131 Identities=14% Similarity=0.187 Sum_probs=104.2
Q ss_pred HhcCCCCCCCCCCCC-CccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhccc-ccCCCCC
Q 038027 24 ISSGKRKGLPPGPRP-YPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDS-LFCDRKV 101 (167)
Q Consensus 24 ~~~~~~~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~-~~~~~~~ 101 (167)
..+++..+.||||++ +|++|+++.+..+++.++.+++++||||+++++++.+++++++|+++++++.++.. .+..+..
T Consensus 6 ~~~~~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~ 85 (491)
T 3v8d_A 6 SSRRRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHF 85 (491)
T ss_dssp -CCCCCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHH
T ss_pred hhhccCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHH
Confidence 344555688999998 69999999998999999999999999999999999999999999999999965431 2222111
Q ss_pred ccccccCccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHH
Q 038027 102 PESILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAY 160 (167)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~ 160 (167)
.... ..+ +.+.+...+|+.|+++|+.+ ++.|+.++++.+.+.+.+++.++++.
T Consensus 86 ~~~~--~~~---g~~~~~~~~g~~~~~~Rr~~-~~~f~~~~l~~~~~~i~~~~~~ll~~ 138 (491)
T 3v8d_A 86 ALSA--KAF---GHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRP 138 (491)
T ss_dssp HHHH--HHH---TCCCCCGGGSSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHH--Hhc---CCcccccccchhHHHHHHHH-HHHcCccchHHHHHHHHHHHHHHHHh
Confidence 1111 222 34444445699999999999 79999999999999999999998874
No 22
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.80 E-value=1.5e-19 Score=133.65 Aligned_cols=125 Identities=10% Similarity=0.111 Sum_probs=86.5
Q ss_pred CCCCC-CCCCccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCc
Q 038027 31 GLPPG-PRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQP 109 (167)
Q Consensus 31 ~~~pg-p~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~ 109 (167)
+.||| |.++|++|+++.+..+++..+.+++++||||+++++++.++++++||+++++|+.++...|.+++..... ...
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~-~~~ 82 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFM-TPI 82 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGG-HHH
T ss_pred CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHH-Hhh
Confidence 56788 7789999999888778899999999999999999999999999999999999998766666665433211 011
Q ss_pred cccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHH
Q 038027 110 YQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVE 162 (167)
Q Consensus 110 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~ 162 (167)
. +.++ +. +|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.
T Consensus 83 ~---g~~~-~~-~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~~~ 129 (455)
T 2cib_A 83 F---GEGV-VF-DASPERRKEMLH-NAALRGEQMKGHAATIEDQVRRMIADWG 129 (455)
T ss_dssp H---C-----------------------CCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred c---CCcc-cc-CcHHHHHHHhhh-ccccCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 1 2343 33 489999999999 7999999999999999999999998764
No 23
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.79 E-value=3.4e-20 Score=137.36 Aligned_cols=125 Identities=18% Similarity=0.261 Sum_probs=88.6
Q ss_pred CCCCCCCCCCccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhccccc-CCCCCccccccC
Q 038027 30 KGLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLF-CDRKVPESILSQ 108 (167)
Q Consensus 30 ~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~-~~~~~~~~~~~~ 108 (167)
..+||||.++|++|+++.+..+++.++.++++ ||||+++++++.++++++||+++++|+.++ .| .+++..... .
T Consensus 22 ~eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~--~ 96 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESL--E 96 (467)
T ss_dssp CBCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC-------------
T ss_pred CCCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHH--H
Confidence 46689999999999999887788999999988 999999999999999999999999999865 55 333222111 1
Q ss_pred ccccCC-cceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 109 PYQHHE-FSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 109 ~~~~~~-~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
. ..+ .++ +..+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 97 ~--~~g~~~l-~~~dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~ 148 (467)
T 3dbg_A 97 G--LLGKEGV-ATANGPLHRRQRRTI-QPAFRLDAIPAYGPIMEEEAHALTERWQP 148 (467)
T ss_dssp ----------------------CGGG-HHHHSTTTSTTTHHHHHHHHHHHHHHSCT
T ss_pred H--hcCCCCc-ccCCcHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1 123 444 445699999999999 79999999999999999999999998753
No 24
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.75 E-value=1.8e-17 Score=120.74 Aligned_cols=126 Identities=14% Similarity=0.154 Sum_probs=91.7
Q ss_pred CCCCCCCCccccccccCCCCchHHHHHHHHHhCCeeEEEeC-CeeEEEecCHHHHHHHHHhcc-cccCCCCCccccccCc
Q 038027 32 LPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG-QVTTVVISSPSMAKAILKEHD-SLFCDRKVPESILSQP 109 (167)
Q Consensus 32 ~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-~~~~v~~~~p~~i~~i~~~~~-~~~~~~~~~~~~~~~~ 109 (167)
.||||+++|++|++.. +++..+.+++ +||||+++.++ |.+.+++++++++++++.++. ..+..++..... ..
T Consensus 2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~--~~ 75 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPEL--SA 75 (404)
T ss_dssp ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCC--SH
T ss_pred CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccc--cc
Confidence 3799999999999854 7888898886 59999999874 667778999999999997652 223233222111 10
Q ss_pred c---ccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 110 Y---QHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 110 ~---~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
. ...+...++..+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+.
T Consensus 76 ~~~~~~~~~~~l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~ 132 (404)
T 1jfb_A 76 SGKQAAKAKPTFVDMDPPEHMHQRSMV-EPTFTPEAVKNLQPYIQRTVDDLLEQMKQK 132 (404)
T ss_dssp HHHHHTTSCCCGGGCCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhcccCcccccCchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 01122234444599999999999 799999999999999999999999999764
No 25
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.72 E-value=1.1e-17 Score=122.43 Aligned_cols=119 Identities=10% Similarity=0.055 Sum_probs=92.9
Q ss_pred CccccccccCCCCchHHHHHHHHHhC-CeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccc-cccCccccCCcc
Q 038027 39 YPVIGNLLELGGKPHKSLAKLAKIHG-PIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPES-ILSQPYQHHEFS 116 (167)
Q Consensus 39 ~p~~g~~~~~~~~~~~~~~~~~~~yg-~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 116 (167)
.|++|++..+..+++..+.+++++|| ||+++.++|.+++++++|++++.++. ...|.+...... .....+ +.+
T Consensus 8 ~P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~---g~~ 82 (417)
T 1izo_A 8 DKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD--TDRFQRQNALPKRVQKSLF---GVN 82 (417)
T ss_dssp CCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC--TTTEECTTCSCHHHHTTTT---CTT
T ss_pred CCccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc--ccccccccccccchhhhhc---ccc
Confidence 38999998886788999999999998 99999999999999999999986543 234544322211 100122 333
Q ss_pred eeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 117 LVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 117 ~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
.++..+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.|.+
T Consensus 83 ~l~~~dg~~h~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~ 128 (417)
T 1izo_A 83 AIQGMDGSAHIHRKMLF-LSLMTPPHQKRLAELMTEEWKAAVTRWEK 128 (417)
T ss_dssp CGGGCCHHHHHHHHHHH-HHTSSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ceeecCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34455699999999999 79999999999999999999999999854
No 26
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.72 E-value=7.1e-19 Score=127.66 Aligned_cols=121 Identities=12% Similarity=0.096 Sum_probs=97.6
Q ss_pred CCCCCCccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCccccC
Q 038027 34 PGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHH 113 (167)
Q Consensus 34 pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (167)
++++.+|++||++.+..+++..+.+++++||||++ ++++.++++++||+++++|+.++ .|.+++...... ..+ .
T Consensus 2 ~~~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~-~~~--~ 75 (389)
T 1n97_A 2 KRLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRAL-SRL--T 75 (389)
T ss_dssp EECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHH-HHH--H
T ss_pred cccccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHH-HHH--h
Confidence 45566899999988866788999999999999999 88889999999999999999875 676654111110 111 1
Q ss_pred CcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHH
Q 038027 114 EFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVE 162 (167)
Q Consensus 114 ~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~ 162 (167)
+.++++. +|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.
T Consensus 76 g~~l~~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~ 122 (389)
T 1n97_A 76 GRGLLTD-WGESWKEARKAL-KDPFLPKNVRGYREAMEEEARAFFGEWR 122 (389)
T ss_dssp CSSTTTC-CHHHHHHHHHHH-CGGGSHHHHHTTHHHHHHHHHHHHHTCC
T ss_pred CCccccC-CcHHHHHHHHHh-CcccCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3555544 599999999999 7999999999999999999999998764
No 27
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.72 E-value=1.8e-17 Score=121.19 Aligned_cols=122 Identities=13% Similarity=0.067 Sum_probs=92.0
Q ss_pred CCCCCCCccccccccCCCCchHHHHHHHHHh-CCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccc-cccCcc
Q 038027 33 PPGPRPYPVIGNLLELGGKPHKSLAKLAKIH-GPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPES-ILSQPY 110 (167)
Q Consensus 33 ~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~y-g~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~-~~~~~~ 110 (167)
+||| |++|+++.+..+++.++.+++++| |||+++.+++.+++++++|++++ ++.+. ..|.+.+.... .....+
T Consensus 4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~~ 78 (415)
T 3awm_A 4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTLL 78 (415)
T ss_dssp --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTTS
T ss_pred CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhcc
Confidence 5665 799999888677899999999999 79999999889999999999987 66443 35554432211 100112
Q ss_pred ccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 111 QHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 111 ~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
+.+.++..+|+.|+++|+++ ++.|+.++++.+.+.+.+.++++++.|.+
T Consensus 79 ---g~~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~~~~ 127 (415)
T 3awm_A 79 ---GQGGVQGLDGETHRHRKQMF-MGLMTPERVRALAQLFEAEWRRAVPGWTR 127 (415)
T ss_dssp ---CSSSGGGCCHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCcceeecCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33334455699999999999 79999999999999999999999999865
No 28
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.71 E-value=9.7e-19 Score=130.15 Aligned_cols=129 Identities=12% Similarity=0.174 Sum_probs=97.6
Q ss_pred CCCCCCCCCCCC-CccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcc-cccCCCCCccc
Q 038027 27 GKRKGLPPGPRP-YPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHD-SLFCDRKVPES 104 (167)
Q Consensus 27 ~~~~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~-~~~~~~~~~~~ 104 (167)
+...+.||||++ +|++|+++.+..+++..+.+++++||+|+++++++.++++++||+++++|+.++. ..+.+.. ..
T Consensus 9 ~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~--~~ 86 (491)
T 3dax_A 9 RRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFH--FA 86 (491)
T ss_dssp CCCTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHH--HH
T ss_pred ccCCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHH--HH
Confidence 344578899887 8999999988778899999999999999999999999999999999999997543 2222211 11
Q ss_pred cccCccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHH
Q 038027 105 ILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYV 161 (167)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l 161 (167)
.....+ +.+++...+|+.|+++|+.+ .+.|+.++++.+.+.+.+++.++++..
T Consensus 87 ~~~~~~---g~~~~~~~~g~~w~~~r~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~ 139 (491)
T 3dax_A 87 TSAKAF---GHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPP 139 (491)
T ss_dssp HHHHHH---TCCCCCGGGTSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHc---CCCcccccchhHHHHHHHHH-HHhcCcccHHHHHHHHHHHHHHHHHhh
Confidence 100112 34444234588999999999 699999999999988888888777554
No 29
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.70 E-value=3.3e-16 Score=114.52 Aligned_cols=126 Identities=12% Similarity=0.154 Sum_probs=93.6
Q ss_pred CCCCCCCCCccccccccCCCCchHHHHHHHHHh-CCeeEEEe-CCeeEEEecCHHHHHHHHHhcccccCCCCCccccccC
Q 038027 31 GLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIH-GPIMSLRL-GQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQ 108 (167)
Q Consensus 31 ~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~y-g~i~~~~~-~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~ 108 (167)
..+|+|+.+|.+..-..+..+++..+.++ ++| |||+++++ ++.++++++||+++++|+.++ .+.+++..... .
T Consensus 5 ~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~--~ 79 (412)
T 2zbx_A 5 ATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDNF--P 79 (412)
T ss_dssp ---CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTTS--C
T ss_pred CCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCc--ccccCcccccc--c
Confidence 55677777776533334567899999999 778 99999997 889999999999999999754 24443321111 1
Q ss_pred ccc-----c--CCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 109 PYQ-----H--HEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 109 ~~~-----~--~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
... . .+.++ +..+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.|.+
T Consensus 80 ~~~~~~~~~~~~~~~l-~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~ 139 (412)
T 2zbx_A 80 ATSPRFEAVRESPQAF-IGLDPPEHGTRRRMT-ISEFTVKRIKGMRPEVEEVVHGFLDEMLA 139 (412)
T ss_dssp CCSGGGC----CCCCG-GGCCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccc-ccCCcHHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 110 0 12344 445699999999999 79999999999999999999999999975
No 30
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.70 E-value=1.2e-16 Score=116.68 Aligned_cols=123 Identities=18% Similarity=0.171 Sum_probs=93.8
Q ss_pred CCCCCCCCCCccccccccCCCCchHHHHHHHHHhCCeeEEE----e-CC-eeEEEecCHHHHHHHH-HhcccccCCCCCc
Q 038027 30 KGLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLR----L-GQ-VTTVVISSPSMAKAIL-KEHDSLFCDRKVP 102 (167)
Q Consensus 30 ~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~----~-~~-~~~v~~~~p~~i~~i~-~~~~~~~~~~~~~ 102 (167)
.+.||||+++|+. +..+++..+.++ ++||||++++ + ++ .++++++||+++++|+ .++ .|.+++..
T Consensus 9 ~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~~~~ 80 (406)
T 1ued_A 9 APLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTRPQF 80 (406)
T ss_dssp CCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECCCCC
T ss_pred CCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--cccccccc
Confidence 3567889888876 356789999999 9999999999 6 78 8999999999999999 433 34444321
Q ss_pred cccccCccc--c-CCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 103 ESILSQPYQ--H-HEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 103 ~~~~~~~~~--~-~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
... ...+. . .+.+++ ..+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 81 ~~~-~~~~~~~~~~~~~l~-~~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~ 141 (406)
T 1ued_A 81 TQS-KSGAHVEAQFVGQIS-TYDPPEHTRLRKML-TPEFTVRRIRRMEPAIQSLIDDRLDLLEA 141 (406)
T ss_dssp ----------CGGGTTCGG-GCCTTHHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc-ccccccccccccccc-cCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 110 00111 0 123444 45699999999999 79999999999999999999999999975
No 31
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.69 E-value=1.4e-16 Score=117.54 Aligned_cols=113 Identities=19% Similarity=0.236 Sum_probs=88.9
Q ss_pred CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCccc--cCCcceeeCCCChHH
Q 038027 49 GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQ--HHEFSLVWLPVSPLW 126 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~w 126 (167)
+..++..+.+|+++||||+++++++.++++++||+++++|+.+ ..+.+++.........++ ..+.+++++.+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 3567888999999999999999999999999999999999963 344443321111001111 124666666679999
Q ss_pred HHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 127 RSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 127 ~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
+++|+++ ++.|+.++++.+.+.+.++++++++.+.+.
T Consensus 87 ~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~ 123 (456)
T 3mdm_A 87 HKQRRVI-DLAFSRSSLVSLMETFNEKAEQLVEILEAK 123 (456)
T ss_dssp HHHHHHH-GGGGSHHHHHTTHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999 799999999999999999999999999764
No 32
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.67 E-value=5e-17 Score=121.19 Aligned_cols=127 Identities=17% Similarity=0.206 Sum_probs=93.3
Q ss_pred CCCCCCCCCCCC-CccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCcccc
Q 038027 27 GKRKGLPPGPRP-YPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESI 105 (167)
Q Consensus 27 ~~~~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~ 105 (167)
++..+.||||++ +|++|+++.+..+++..+.+++++||||+++++++.++++++||+++++++.++...+..++.....
T Consensus 14 ~~~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~ 93 (498)
T 3b6h_A 14 TRRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFL 93 (498)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHH
T ss_pred ccCCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHH
Confidence 445578899988 8999999888667899999999999999999999999999999999999997654312222211111
Q ss_pred ccCccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHH
Q 038027 106 LSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYV 161 (167)
Q Consensus 106 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l 161 (167)
....+ +.+++ ..+|+.| |+++ .+.|+.+.++.+.+.+.+++.+.++..
T Consensus 94 ~~~~~---g~~~~-~~~~~~~---rr~~-~~~~~~~~l~~~~~~~~~~~~~~l~~~ 141 (498)
T 3b6h_A 94 MERIF---DVQLP-HYSPSDE---KARM-KLTLLHRELQALTEAMYTNLHAVLLGD 141 (498)
T ss_dssp HHHTS---CCCCT-TCCHHHH---HHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHc---CCCcc-ccCHHHH---HHHH-HHhhchHhHHHHHHHHHHHHHHHHhhc
Confidence 00122 34444 3346666 5677 688999999998888888877777654
No 33
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.67 E-value=7.7e-18 Score=124.81 Aligned_cols=129 Identities=19% Similarity=0.285 Sum_probs=95.7
Q ss_pred hcCCCCCCCCCCCC-CccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCcc
Q 038027 25 SSGKRKGLPPGPRP-YPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPE 103 (167)
Q Consensus 25 ~~~~~~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~ 103 (167)
++++..+.||||++ +|++||++.+..+++..+.+++++||||+++++++.+++++++|+++++++.++.. +..++...
T Consensus 12 ~~~~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~ 90 (475)
T 3b98_A 12 RRTRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQ 90 (475)
T ss_dssp -CCCCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHH
T ss_pred hcccCCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHH
Confidence 33445588999998 99999998886678999999999999999999999999999999999999976432 22221111
Q ss_pred ccccCccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHH
Q 038027 104 SILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVE 162 (167)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~ 162 (167)
......+ +.+++. .+|+.| |+++ ++.|+.++++.+.+.+.+++.++++.+.
T Consensus 91 ~~~~~~~---g~~~~~-~~~~~~---R~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~ 141 (475)
T 3b98_A 91 VLMKRIF---NMILPS-HNPESE---KKRA-EMHFQGASLTQLSNSMQNNLRLLMTPSE 141 (475)
T ss_dssp HHHHHTT---CCCCTT-CCHHHH---HHHH-HHHTSHHHHHHHHHHHHHHHHHHSSTTT
T ss_pred HHHHHHh---CCCCCC-CChHHH---HHHH-HHHcChhhHHHHHHHHHHHHHHHHhhcc
Confidence 1100112 344443 336655 6788 6899999999999999999988887653
No 34
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.66 E-value=8.9e-16 Score=112.02 Aligned_cols=125 Identities=16% Similarity=0.269 Sum_probs=96.0
Q ss_pred CCCCCCCCCccccccccCCCCchHHHHHHHHHhCCeeEEEe-CCee-EEEecCHHHHHHHHHhcccccCCCCCcccccc-
Q 038027 31 GLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRL-GQVT-TVVISSPSMAKAILKEHDSLFCDRKVPESILS- 107 (167)
Q Consensus 31 ~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~-~~~~-~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~- 107 (167)
+.+|+|+.+|+.++. ..+++..+.+++ +||||+++.+ +|.+ +++++||+++++|+.+ ..|.+++.......
T Consensus 8 ~~~~~~~~~p~~~~~---~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~ 81 (406)
T 1s1f_A 8 QAVPPVRDWPAVDLP---GSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQVTR 81 (406)
T ss_dssp CCSCCEEECCCCCCC---TTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTTBCB
T ss_pred hhccCCCCCCCCccc---ccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCCccc
Confidence 566777778887764 568899998885 7999999986 5666 9999999999999975 35666543321100
Q ss_pred -Cc-cccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 108 -QP-YQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 108 -~~-~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
.. ....+.++++. +|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 82 ~~~~~~~~~~~l~~~-dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~ 137 (406)
T 1s1f_A 82 LAPHFIPARGAVGFL-DPPDHTRLRRSV-AAAFTARGVERVRERSRGMLDELVDAMLR 137 (406)
T ss_dssp SSSSCSSCTTSGGGC-CTTHHHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccC-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 11124555554 599999999999 79999999999999999999999999973
No 35
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.64 E-value=3e-15 Score=109.23 Aligned_cols=110 Identities=14% Similarity=0.155 Sum_probs=85.0
Q ss_pred cCCCCchHHHHHHHHHhCCeeEEEe-CCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCc---ccc----CCccee
Q 038027 47 ELGGKPHKSLAKLAKIHGPIMSLRL-GQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQP---YQH----HEFSLV 118 (167)
Q Consensus 47 ~~~~~~~~~~~~~~~~yg~i~~~~~-~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~ 118 (167)
.+..+++..+.+| ++||||+++++ ++.++++++||+++++++.++ .+.+++..... .. +.. .+.++
T Consensus 21 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~l- 94 (408)
T 3abb_A 21 TCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDF--PVVVRRTEDRGGLAFPL- 94 (408)
T ss_dssp SSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTC--CCCC---------CCTT-
T ss_pred ccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCC--Ccccccccccc--cccccCCcccccccccc-
Confidence 3457889999999 89999999997 889999999999999999753 23343321111 10 110 12344
Q ss_pred eCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 119 WLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 119 ~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
+..+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.|.+
T Consensus 95 ~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~ 138 (408)
T 3abb_A 95 IGVDDPVHARQRRML-IPSFGVKRMNAIRPRLQSLVDRLLDDMLA 138 (408)
T ss_dssp TTCCTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445699999999999 79999999999999999999999999975
No 36
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.64 E-value=2.9e-15 Score=110.14 Aligned_cols=127 Identities=17% Similarity=0.151 Sum_probs=94.7
Q ss_pred CCCCCCCCCccccccccCCCCchHHHHHHHHHhCCeeEEE--------eCCeeEEEecCHHHHHHHHHhcccccCCCCCc
Q 038027 31 GLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLR--------LGQVTTVVISSPSMAKAILKEHDSLFCDRKVP 102 (167)
Q Consensus 31 ~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~--------~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~ 102 (167)
..||+|..+++++.......+++..+.++ ++||||+++. +|+.+++++++++++++++.+ ...|.+++..
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~-~~~fs~~~~~ 95 (433)
T 3ivy_A 18 PSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRH-SDVFSSYENG 95 (433)
T ss_dssp --CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHC-TTTEESTTTC
T ss_pred CCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcC-hhhccCCccc
Confidence 44566666666654433346799999999 7799999998 444799999999999999965 3557666543
Q ss_pred cccccC--------ccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 103 ESILSQ--------PYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 103 ~~~~~~--------~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
... . .....+.+++ ..+|+.|+++|+++ ++.|+.+.++.+.+.+.++++++++.+.+
T Consensus 96 ~~~--~~~~~~~~~~~~~~~~~l~-~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~ 160 (433)
T 3ivy_A 96 VIP--RFKNDIAREDIEVQRFVML-NMDAPHHTRLRKII-SRGFTPRAVGRLHDELQERAQKIAAEAAA 160 (433)
T ss_dssp SCC--CCCTTCCHHHHHGGGGSGG-GCCTTHHHHHHHHH-GGGSCHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred ccc--cccccccccccccccCCcc-ccChHHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 322 1 1111234444 55699999999999 79999999999999999999999999864
No 37
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.63 E-value=2.9e-16 Score=116.97 Aligned_cols=131 Identities=9% Similarity=0.102 Sum_probs=96.3
Q ss_pred CCCCCCCCCCCCccccccccC-----CCCchHHHHHHHHHhCC-eeEEEeCCeeE-------EEecCHHHHHHHHHhcc-
Q 038027 28 KRKGLPPGPRPYPVIGNLLEL-----GGKPHKSLAKLAKIHGP-IMSLRLGQVTT-------VVISSPSMAKAILKEHD- 93 (167)
Q Consensus 28 ~~~~~~pgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yg~-i~~~~~~~~~~-------v~~~~p~~i~~i~~~~~- 93 (167)
.+.+.||||.++|++|+++.+ ..+++.++.++.++||+ |+++++++.++ +++++++..+.++....
T Consensus 25 ~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v 104 (495)
T 3dsk_A 25 LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKV 104 (495)
T ss_dssp CCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTTE
T ss_pred CCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccccc
Confidence 345789999999999999776 47899999999999999 99999988877 66677766665553311
Q ss_pred ---cccCCCCCccccccCccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 94 ---SLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 94 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
..+.... .... ..++......++..+|+.|+++|+++ ++.|+... +.+.+.++++++++++.|.+
T Consensus 105 ~k~~~~~~~~-~~~~--~l~g~~~~~~~~~~~g~~h~~~R~~~-~~~f~~~~-~~~~~~i~~~~~~ll~~~~~ 172 (495)
T 3dsk_A 105 EKKDLLTGTY-MPST--ELTGGYRILSYLDPSEPKHEKLKNLL-FFLLKSSR-NRIFPEFQATYSELFDSLEK 172 (495)
T ss_dssp ECSSCTTSSS-CCCG--GGGTTCCCGGGCCTTSHHHHHHHHHH-HHHHHHTT-TTHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccC-CCCc--cccCCCcceeeeCCCchHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 1111111 1111 22332223445555799999999999 79999865 88999999999999999975
No 38
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.63 E-value=2.5e-15 Score=108.84 Aligned_cols=110 Identities=12% Similarity=0.145 Sum_probs=87.0
Q ss_pred CCCchHHHHHHHHHhCCeeEEEeCC----eeEEEecCHHHHHHHHHhcccccCCCCCccccccCccccCCcceeeCCCCh
Q 038027 49 GGKPHKSLAKLAKIHGPIMSLRLGQ----VTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSP 124 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg~i~~~~~~~----~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 124 (167)
..+++..+.++ ++||||+++++++ .++++++||+++++++. +...|.+++..... .... ...+.++..+|+
T Consensus 11 ~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~--~~~~-~~~~~~~~~~g~ 85 (384)
T 3oo3_A 11 RLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILA-DHERFSSMRPVDDE--ADRA-LLPGILQAYDPP 85 (384)
T ss_dssp TTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHH-CTTTEECSCCCC-------C-CCTTCGGGCCTT
T ss_pred ccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHh-CchhccCCcccccc--cccc-ccccccccCCCh
Confidence 57899999999 4999999998876 89999999999999994 45678777655432 2111 223445566699
Q ss_pred HHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 125 LWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 125 ~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
.|+++|+.+ ++.|+.++++.+.+.+.++++++++.|.+.
T Consensus 86 ~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~ 124 (384)
T 3oo3_A 86 DHTRLRRTV-APAYSARRMERLRPRIEEIVEECLDDFESV 124 (384)
T ss_dssp HHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999 799999999999999999999999999653
No 39
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.60 E-value=1.4e-14 Score=105.56 Aligned_cols=109 Identities=16% Similarity=0.162 Sum_probs=86.1
Q ss_pred CCCCchHHHHHHHHHhCCeeEEEe-CCeeEEEecCHHHHHHHHHhcccccCCCCC--c-cccccCcccc--CCcceeeCC
Q 038027 48 LGGKPHKSLAKLAKIHGPIMSLRL-GQVTTVVISSPSMAKAILKEHDSLFCDRKV--P-ESILSQPYQH--HEFSLVWLP 121 (167)
Q Consensus 48 ~~~~~~~~~~~~~~~yg~i~~~~~-~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~--~-~~~~~~~~~~--~~~~~~~~~ 121 (167)
+..+++..+.++ ++||||+++++ ++.+++++++|+++++++.++ .|.+++. . ... ..+.. .+.++ +..
T Consensus 17 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~--~~~~~~~~~~~l-~~~ 90 (403)
T 3aba_A 17 CPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQD--GVVTQKPGRGSL-LWQ 90 (403)
T ss_dssp STTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSS--CCCCCCCCTTCC-TTC
T ss_pred cccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccc--cccccccccccc-ccC
Confidence 356788889999 89999999997 889999999999999999763 4665532 1 111 11111 23454 445
Q ss_pred CChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 122 VSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 122 ~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 91 ~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~ 131 (403)
T 3aba_A 91 DEPEHTSDRKLL-AKEFTVRRMQALRPNIQRIVDEHLDAIEA 131 (403)
T ss_dssp CTTHHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 699999999999 79999999999999999999999999973
No 40
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.59 E-value=1.4e-14 Score=105.94 Aligned_cols=111 Identities=15% Similarity=0.142 Sum_probs=87.1
Q ss_pred CCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCcccc---ccCccccCCcceeeCCCCh
Q 038027 48 LGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESI---LSQPYQHHEFSLVWLPVSP 124 (167)
Q Consensus 48 ~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~ 124 (167)
+..+++..+.++ ++||||+++++++.+++++++|+++++++.++. |.+++..... ........+.+++ ..+|+
T Consensus 18 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~-~~~g~ 93 (411)
T 3a4g_A 18 FWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPMMI-LMDPP 93 (411)
T ss_dssp GTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCCGG-GCCTT
T ss_pred hhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccccc-cCCch
Confidence 356899999999 899999999999999999999999999997643 6665432100 0011111245554 45699
Q ss_pred HHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 125 LWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 125 ~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
.|+++|+++ ++.|+.+.++.+.+.+.++++++++.+.+
T Consensus 94 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~ 131 (411)
T 3a4g_A 94 DHTRLRKLV-GRSFTVRRMNELEPRITEIADGLLAGLPT 131 (411)
T ss_dssp HHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999 79999999999999999999999998853
No 41
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.58 E-value=7e-15 Score=107.95 Aligned_cols=126 Identities=12% Similarity=0.083 Sum_probs=93.7
Q ss_pred CCCCCCCCCCccccccccCC-----CCchHHHHHHHHHhCCeeEEEe-CCeeEEEecCHHHHHHHHHhcccccCCCCC-c
Q 038027 30 KGLPPGPRPYPVIGNLLELG-----GKPHKSLAKLAKIHGPIMSLRL-GQVTTVVISSPSMAKAILKEHDSLFCDRKV-P 102 (167)
Q Consensus 30 ~~~~pgp~~~p~~g~~~~~~-----~~~~~~~~~~~~~yg~i~~~~~-~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~-~ 102 (167)
.+.||| ++|++.... .+++..+.++++ ||||+++++ ++.+++++++++++++++.+. ..|.+++. .
T Consensus 5 ~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~~ 77 (428)
T 1cpt_A 5 ATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGSE 77 (428)
T ss_dssp CCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSCS
T ss_pred cccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCccccc
Confidence 456676 788765542 347788888876 799999997 678999999999999999653 46776654 2
Q ss_pred ccc-ccC---c---cc---cCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 103 ESI-LSQ---P---YQ---HHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 103 ~~~-~~~---~---~~---~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
... ... . .+ ..+.+++ ..+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+.
T Consensus 78 ~~~~~~~~~~~~~~~g~~~~~~~~l~-~~~g~~~~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~ 147 (428)
T 1cpt_A 78 ILYDQNNEAFMRSISGGCPHVIDSLT-SMDPPTHTAYRGLT-LNWFQPASIRKLEENIRRIAQASVQRLLDF 147 (428)
T ss_dssp SCCCHHHHHHHHHHTTTSSCSSCCGG-GCCTTHHHHHHHHH-HTTSSHHHHGGGHHHHHHHHHHHHHHHHTS
T ss_pred cCCcccccchhccccccccccccccc-cCChHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 110 001 1 22 1123444 44599999999999 799999999999999999999999999754
No 42
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.58 E-value=5.9e-15 Score=107.39 Aligned_cols=111 Identities=16% Similarity=0.145 Sum_probs=88.1
Q ss_pred CCCCchHHHHHHHHHh--CCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCccccCCcceeeCCCChH
Q 038027 48 LGGKPHKSLAKLAKIH--GPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPL 125 (167)
Q Consensus 48 ~~~~~~~~~~~~~~~y--g~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 125 (167)
+..+++..+.+|+++| |||+++.+++ +++++++|+++++++. +...|.+++..... .. ...+...++..+|+.
T Consensus 17 ~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~--~~-~~~~~~~~~~~~g~~ 91 (398)
T 4fb2_A 17 PDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQ-NTKAFSNKGVTFPR--YE-TGEFELMMAGQDDPV 91 (398)
T ss_dssp TTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHT-CCSSEEGGGCSSSC--C-----CCCTTTTCCTTH
T ss_pred hhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHh-ChhhccCCcccccC--CC-CcccccCcccCCchH
Confidence 4578999999999999 9999998876 5899999999999994 45567666544332 11 112233445567999
Q ss_pred HHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 126 WRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 126 w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+.
T Consensus 92 ~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~ 129 (398)
T 4fb2_A 92 HKKYRQLV-AKPFSPEATDLFTEQLRQSTNDLIDARIEL 129 (398)
T ss_dssp HHHHHHHH-HTTTCHHHHHTTHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999 799999999999999999999999988653
No 43
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.58 E-value=3.1e-14 Score=104.18 Aligned_cols=111 Identities=12% Similarity=0.127 Sum_probs=86.6
Q ss_pred CCCchHHHHHHHHHhCCeeEEEeC-CeeEEEecCHHHHHHHHHhcccccCCCCCcccc--ccCcc---ccCCcceeeCCC
Q 038027 49 GGKPHKSLAKLAKIHGPIMSLRLG-QVTTVVISSPSMAKAILKEHDSLFCDRKVPESI--LSQPY---QHHEFSLVWLPV 122 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg~i~~~~~~-~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~ 122 (167)
..+++..+.+++++ |||++++++ |.+++++++|+++++++.++ .|.+++..... ..... +..+.+++ ..+
T Consensus 28 ~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~d 103 (417)
T 3tyw_A 28 PFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFI-RTD 103 (417)
T ss_dssp TTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGG-GCC
T ss_pred ccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchh-hcC
Confidence 57899999999998 999999986 58999999999999999865 56554321111 00100 01234444 445
Q ss_pred ChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 123 SPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 123 g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+.
T Consensus 104 g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~ 144 (417)
T 3tyw_A 104 APEHTRYRRML-LPAFTVRRVRAMRPAVQARVDEILDGMLAA 144 (417)
T ss_dssp HHHHHHHHHHH-GGGGCHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999 799999999999999999999999999764
No 44
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.57 E-value=1.8e-14 Score=105.55 Aligned_cols=109 Identities=14% Similarity=0.145 Sum_probs=86.2
Q ss_pred CCCCchHHHHHHHHHhCCeeEEEe-CCeeEEEecCHHHHHHHHHhcccccCCCCCc-cccccCcccc--CCcceeeCCCC
Q 038027 48 LGGKPHKSLAKLAKIHGPIMSLRL-GQVTTVVISSPSMAKAILKEHDSLFCDRKVP-ESILSQPYQH--HEFSLVWLPVS 123 (167)
Q Consensus 48 ~~~~~~~~~~~~~~~yg~i~~~~~-~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~g 123 (167)
+..+++..+.++ ++||||+++++ ++.++++++||+++++|+.++ .|.+++.. ... ..+.. .+.+++ ..+|
T Consensus 35 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~--~~~~~~~~~~~l~-~~dg 108 (417)
T 2y5n_A 35 HGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDE--PRTRPEMVKGGLL-SMDP 108 (417)
T ss_dssp SSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCC--CBSSSSCCCCSGG-GCCT
T ss_pred hccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccc--cccCcccccccCc-cCCc
Confidence 356889999999 89999999997 789999999999999999753 45554322 111 11111 234554 4569
Q ss_pred hHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 124 PLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 124 ~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 109 ~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~ 147 (417)
T 2y5n_A 109 PEHSRLRRLV-VKAFTARRAESLRPRAREIAHELVDQMAA 147 (417)
T ss_dssp THHHHHHHHH-HHHSCHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999 79999999999999999999999999874
No 45
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.57 E-value=1e-14 Score=106.31 Aligned_cols=111 Identities=19% Similarity=0.188 Sum_probs=86.9
Q ss_pred CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccc--cCccccCCcceeeCCCChHH
Q 038027 49 GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESIL--SQPYQHHEFSLVWLPVSPLW 126 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~w 126 (167)
..+++..+.++ ++||||+++.+++.+++++++|+++++++.++ ..|.+++...... .......+.++ +..+|+.|
T Consensus 12 ~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~~h 88 (404)
T 3ejb_B 12 LKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMM-LFQNQPDH 88 (404)
T ss_dssp HHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSG-GGCCTTHH
T ss_pred ccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcch-hhcCCchH
Confidence 46788888888 57999999999999999999999999999875 5666655322110 00111123455 44559999
Q ss_pred HHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 127 RSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 127 ~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
+++|+++ ++.|+.++++.+.+.+.+++.++++.+.+
T Consensus 89 ~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~ 124 (404)
T 3ejb_B 89 RRLRTLA-SGAFTPRTTESYQPYIIETVHHLLDQVQG 124 (404)
T ss_dssp HHHHHHH-HGGGSHHHHHTTHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999 79999999999999999999999998864
No 46
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.57 E-value=5.6e-15 Score=109.42 Aligned_cols=131 Identities=11% Similarity=0.108 Sum_probs=92.7
Q ss_pred CCCCCCCCCCCCccccccccC-----CC-CchHHHHHHHHHhCC-eeEEEeCC-------eeEEEecCHHHHHHHHHh--
Q 038027 28 KRKGLPPGPRPYPVIGNLLEL-----GG-KPHKSLAKLAKIHGP-IMSLRLGQ-------VTTVVISSPSMAKAILKE-- 91 (167)
Q Consensus 28 ~~~~~~pgp~~~p~~g~~~~~-----~~-~~~~~~~~~~~~yg~-i~~~~~~~-------~~~v~~~~p~~i~~i~~~-- 91 (167)
.+.+.+|||.++|++|++..+ .. +++.++.+++++||+ |+++++++ ...+++++.+..+.++..
T Consensus 6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~ 85 (473)
T 3dan_A 6 KPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSK 85 (473)
T ss_dssp SCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcc
Confidence 455889999999999999875 35 788999999999999 99999863 345555666555444421
Q ss_pred --cccccCCCCCccccccCccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 92 --HDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 92 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
+...+.... .... ...+......++..+|+.|+++|+++ ++.|+.+ ++.+.+.+.++++++++.|.+
T Consensus 86 ~~~~~~~~~~~-~~~~--~~~g~~~~~~~~~~~~~~h~~~R~~~-~~~f~~~-~~~~~~~i~~~~~~ll~~~~~ 154 (473)
T 3dan_A 86 VEKKDLFTGTY-MPST--KLTGGYRVLSYLDPSEPRHAQLKNLL-FFMLKNS-SNRVIPQFETTYTELFEGLEA 154 (473)
T ss_dssp EECSSCTTSSS-CCCG--GGGTTSCCGGGCCTTSHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred eeccccccccc-cCCc--cccCCCcceeeeCCCcHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 1111 12221223445556799999999999 7999995 899999999999999999975
No 47
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.56 E-value=2.6e-14 Score=104.20 Aligned_cols=109 Identities=17% Similarity=0.167 Sum_probs=86.1
Q ss_pred CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCc--c----ccc-cCcc-cc----CCcc
Q 038027 49 GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVP--E----SIL-SQPY-QH----HEFS 116 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~--~----~~~-~~~~-~~----~~~~ 116 (167)
..+++..+.++ ++||||+++++++.+++++++|+++++++.++ .|.+++.. . ... ...+ .. .+.+
T Consensus 13 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (404)
T 1z8o_A 13 HVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN 89 (404)
T ss_dssp TSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred ccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcccc
Confidence 56889999999 89999999999999999999999999999865 56665432 1 100 0011 11 2345
Q ss_pred eeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHH
Q 038027 117 LVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVE 162 (167)
Q Consensus 117 ~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~ 162 (167)
+++ .+|+.|+++|+++ ++.|+.+.++.+.+.+.++++++++.+.
T Consensus 90 l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~ 133 (404)
T 1z8o_A 90 MGT-SDPPTHTRLRKLV-SQEFTVRRVEAMRPRVEQITAELLDEVG 133 (404)
T ss_dssp GGG-CCTTHHHHHHHHH-HTTSCHHHHHHTHHHHHHHHHHHHHTSC
T ss_pred ccc-CCCcHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhhh
Confidence 544 4699999999999 7999999999999999999999998874
No 48
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.55 E-value=1e-14 Score=106.79 Aligned_cols=127 Identities=11% Similarity=0.057 Sum_probs=93.4
Q ss_pred CCCCCCCCCCCCccc--ccccc-----CCCCchHHHHHHHHHhC--CeeEEEeCCeeEEEecCHHHHHHHHHhcccccCC
Q 038027 28 KRKGLPPGPRPYPVI--GNLLE-----LGGKPHKSLAKLAKIHG--PIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCD 98 (167)
Q Consensus 28 ~~~~~~pgp~~~p~~--g~~~~-----~~~~~~~~~~~~~~~yg--~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~ 98 (167)
++.+.||||...|.. +.+-. +..+++..+.+|+ +|| ||+++...| +++++++++++++++.+ ...|.+
T Consensus 8 ~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~-~~~f~~ 84 (415)
T 2zwu_A 8 SNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYED-YRHFSS 84 (415)
T ss_dssp ---CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHC-TTTEET
T ss_pred CccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcC-ccccCC
Confidence 345888999988764 43221 1346788888885 789 999998333 69999999999999964 446776
Q ss_pred CC-CccccccCccccCCcc-eeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 99 RK-VPESILSQPYQHHEFS-LVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 99 ~~-~~~~~~~~~~~~~~~~-~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
++ ..... . ...+.+ +++. +|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.|.+
T Consensus 85 ~~~~~~~~--~--~~~~~~~l~~~-~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~ 145 (415)
T 2zwu_A 85 ECPFIPRE--A--GEAYDFIPTSM-DPPEQRQFRALA-NQVVGMPVVDKLENRIQELACSLIESLRP 145 (415)
T ss_dssp TSCSSSHH--H--HHHCCCTTTTC-CTTTTHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CcccCCCC--c--cccccccCccC-CCcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 65 11111 1 111344 5444 599999999999 79999999999999999999999999865
No 49
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.54 E-value=8.7e-14 Score=101.49 Aligned_cols=108 Identities=15% Similarity=0.096 Sum_probs=85.6
Q ss_pred CCCchHHHHHHHHHhCCeeEEEe-CCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCccccCCcc--eeeCCCC--
Q 038027 49 GGKPHKSLAKLAKIHGPIMSLRL-GQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFS--LVWLPVS-- 123 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg~i~~~~~-~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g-- 123 (167)
..+++..+.++ ++||||+++++ ++.++++++||+++++|+.++ .|.+++.......... .+.+ +++ .+|
T Consensus 25 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~--~~~~~~l~~-~~g~~ 98 (404)
T 2xbk_A 25 MLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV--RSPFLDLLI-SDADA 98 (404)
T ss_dssp TTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS--CCHHHHTTC-BCSCH
T ss_pred ccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc--cccccccee-eCCCC
Confidence 46788999999 89999999997 789999999999999999763 4555543321100111 1344 444 459
Q ss_pred ----hHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 124 ----PLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 124 ----~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 99 ~~~~~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~ 141 (404)
T 2xbk_A 99 ESGRRQHAETRRLL-TPLFSARRVLEMQPKVEEAADTLLDAFIA 141 (404)
T ss_dssp HHHHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999 79999999999999999999999999975
No 50
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.54 E-value=6.1e-14 Score=102.55 Aligned_cols=125 Identities=17% Similarity=0.120 Sum_probs=90.7
Q ss_pred CCCCCCCCCccccccccCCCCchHHHHHHHHHhCCeeEEEe-CCeeEEEecCHHHHHHHHHhcccccCCCCCcccccc-C
Q 038027 31 GLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRL-GQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILS-Q 108 (167)
Q Consensus 31 ~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~-~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~-~ 108 (167)
..++||.. |+- ..+..+++..+.+++ +||||+++++ ++.+++++++|+++++++.++ .|.+++....... .
T Consensus 7 ~~~~g~~~-~~~---~~~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~ 79 (413)
T 2z36_A 7 DELAGLEL-PVE---RGCPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFT 79 (413)
T ss_dssp ---CCCEE-CCC---CCBTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSS
T ss_pred HHhccccC-CCC---cccccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCccccc
Confidence 34566663 432 233568899999997 7899999997 789999999999999999763 5666543211100 0
Q ss_pred cc-cc-----CCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 109 PY-QH-----HEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 109 ~~-~~-----~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
.. .. .+.+.++..+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~ 139 (413)
T 2z36_A 80 LDAATLQQLRSQPPLMLGMDGAEHSAARRPV-IGEFTVKRLAALRPRIQDIVDHFIDDMLA 139 (413)
T ss_dssp CCHHHHHHHTTSCCCGGGCCHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01 11 145513444699999999999 79999999999999999999999999863
No 51
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.54 E-value=1.6e-14 Score=105.39 Aligned_cols=112 Identities=18% Similarity=0.256 Sum_probs=85.3
Q ss_pred cCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCC--cc---cccc--Ccccc-CCccee
Q 038027 47 ELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKV--PE---SILS--QPYQH-HEFSLV 118 (167)
Q Consensus 47 ~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~--~~---~~~~--~~~~~-~~~~~~ 118 (167)
.+..+++..+.++ ++||||+++++++.++++++||+++++|+.++. +.+++. .. .... ...+. .+.++
T Consensus 12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l- 87 (408)
T 1odo_A 12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENM- 87 (408)
T ss_dssp TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSG-
T ss_pred cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--cccccccccccccccccccccccccccccc-
Confidence 3457899999999 999999999998999999999999999997542 333221 01 0000 01100 12344
Q ss_pred eCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 119 WLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 119 ~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
+..+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.|.+
T Consensus 88 ~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~ 131 (408)
T 1odo_A 88 FTAYGPNHRKLRRLV-APAFSARRVDAMRPAVEAMVTGLVDRLAE 131 (408)
T ss_dssp GGCCHHHHHHHHHTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455699999999999 79999999999999999999999999974
No 52
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.53 E-value=2.1e-14 Score=104.93 Aligned_cols=113 Identities=15% Similarity=0.113 Sum_probs=84.9
Q ss_pred CCCCCCCCCCCCccccccccCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCcccccc
Q 038027 28 KRKGLPPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILS 107 (167)
Q Consensus 28 ~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 107 (167)
.+...+|||.. ..+++..+.++++ |||| +.++.+++++++|+++++++.++ ..|.+++.....
T Consensus 16 ~pl~~~PGp~~----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~-- 78 (411)
T 2jjn_A 16 TTIDEVPGMAD----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRVIE-- 78 (411)
T ss_dssp -CCCSCCCSSC----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGGST--
T ss_pred CCCCCCCCccc----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCcccccCC--
Confidence 44577787772 1467888889976 9998 56667899999999999999764 467766532211
Q ss_pred CccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHH
Q 038027 108 QPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAY 160 (167)
Q Consensus 108 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~ 160 (167)
. ....+.++++ .+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.
T Consensus 79 ~-~~~~~~~~~~-~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~ 128 (411)
T 2jjn_A 79 G-ASPTPGMIHE-IDPPEHRALRKVV-SSAFTPRTISDLEPRIRDVTRSLLAD 128 (411)
T ss_dssp T-CCCCTTCGGG-CCTTHHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHT
T ss_pred c-cccccccccc-CCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHhc
Confidence 1 1112344444 4599999999999 79999999999999999999999876
No 53
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.51 E-value=9.6e-14 Score=101.55 Aligned_cols=108 Identities=18% Similarity=0.194 Sum_probs=85.2
Q ss_pred CCCchHHHHHHHHHhCCee-----EEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCcc-ccccC--cc-c-cCCccee
Q 038027 49 GGKPHKSLAKLAKIHGPIM-----SLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPE-SILSQ--PY-Q-HHEFSLV 118 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg~i~-----~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~-~~~~~--~~-~-~~~~~~~ 118 (167)
..+++..+.+++ +||||+ ++.+ .++++++||+++++++.++ ..|.+++... .. . .+ + ..+.+++
T Consensus 24 ~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~--~~~~~~~~~~~~~l~ 97 (414)
T 2uuq_A 24 WPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNY--GELEMIGLHDTPPMV 97 (414)
T ss_dssp TTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCT--THHHHHTCSSSCCGG
T ss_pred ccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCccccc--Ccccccccccccccc
Confidence 367888998885 689999 7765 6799999999999999875 5677765432 11 1 12 2 2245555
Q ss_pred eCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 119 WLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 119 ~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
+. +|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.|.+.
T Consensus 98 ~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~ 141 (414)
T 2uuq_A 98 MQ-DPPVHTEFRKLV-SRGFTPRQVETVEPTVRKFVVERLEKLRAN 141 (414)
T ss_dssp GC-CTTHHHHHHHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cC-CchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 55 599999999999 799999999999999999999999998753
No 54
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.51 E-value=4e-14 Score=102.89 Aligned_cols=110 Identities=5% Similarity=-0.030 Sum_probs=86.5
Q ss_pred CCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCccccCCcceeeCCCChHHH
Q 038027 48 LGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWR 127 (167)
Q Consensus 48 ~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~ 127 (167)
+..+++..+.+++++ |||+++..++ +.+++++|+++++++.+ ...|.+++..... .........++..+|+.|+
T Consensus 22 ~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~---~~~~~~~~~~~~~~g~~h~ 95 (396)
T 3oft_A 22 VEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGD-AERLSSQCLAVTP---GLGKVMQFIPLQQDGAEHK 95 (396)
T ss_dssp TTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHC-TTTEESTTCCSST---THHHHHCCTTTTCCHHHHH
T ss_pred hhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcC-cccccCCcccCCC---ccccccccCccccCCcHHH
Confidence 357899999999998 9999998774 48899999999999965 3567766532221 1111112344556699999
Q ss_pred HHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 128 SLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 128 ~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
++|+++ ++.|+.+.++.+.+.+.++++++++.+.+.
T Consensus 96 ~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~ 131 (396)
T 3oft_A 96 AFRTPV-MKGLASRFVVALEPKVQAVARKLMESLRPR 131 (396)
T ss_dssp HHHHHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 999999 799999999999999999999999998653
No 55
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.51 E-value=1.1e-13 Score=101.17 Aligned_cols=111 Identities=20% Similarity=0.199 Sum_probs=84.1
Q ss_pred CCCchHHHHHHHHHhCCeeEEEeCC--eeEEEecCHHHHHHHHHhcccccCCCCCccc---cccCccccCCcceeeCCCC
Q 038027 49 GGKPHKSLAKLAKIHGPIMSLRLGQ--VTTVVISSPSMAKAILKEHDSLFCDRKVPES---ILSQPYQHHEFSLVWLPVS 123 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg~i~~~~~~~--~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g 123 (167)
+++++..+.+++ +||||+++.+++ .+.+++++|+++++|+.+ ..|.+++.... ......+..+.++ +..+|
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l-~~~dg 101 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSL-AFADQ 101 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCS-TTCCT
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhcccccc-ccCCc
Confidence 456778998887 799999998754 789999999999999965 35655432211 0001111003454 44569
Q ss_pred hHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 124 PLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 124 ~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
+.|+++|+++ ++.|+.++++.+.+.+.++++++++.|.+.
T Consensus 102 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~ 141 (411)
T 2dkk_A 102 PDHNRLRRAV-AGAFTVGATKRLRPRAQEILDGLVDGILAE 141 (411)
T ss_dssp THHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHh-hHhhCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999 799999999999999999999999999764
No 56
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.50 E-value=4.8e-14 Score=103.31 Aligned_cols=109 Identities=9% Similarity=0.031 Sum_probs=83.9
Q ss_pred CCCchHHHHHHHHHhC-CeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCccccCCcceeeCCCChHHH
Q 038027 49 GGKPHKSLAKLAKIHG-PIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWR 127 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg-~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~ 127 (167)
..+++..+.++++++| ||+++..++ +++++++|+++++|+. +...|.+++..... .........++..+|+.|+
T Consensus 37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~---~~~~~~~~~~~~~dg~~h~ 111 (421)
T 3lxh_A 37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVPR---EAGEAYDMVPTKLDPPEHT 111 (421)
T ss_dssp GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSSH---HHHHHCCCTTTTCCTTTHH
T ss_pred hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCCc---ccccccccCCccCCcHHHH
Confidence 3578999999987765 899998766 4899999999999994 44577766532221 1111112234555699999
Q ss_pred HHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 128 SLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 128 ~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
++|+++ ++.|+.+.++.+.+.+.++++++++.|.+
T Consensus 112 ~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~ 146 (421)
T 3lxh_A 112 PYRKAI-DKGLNLAEIRKLEDQIRTIAVEIIEGFAD 146 (421)
T ss_dssp HHHHHH-HHHHSHHHHHTTHHHHHHHHHHHHHTTTT
T ss_pred HHHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999 79999999999999999999999998864
No 57
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.50 E-value=6.3e-14 Score=103.13 Aligned_cols=111 Identities=14% Similarity=0.065 Sum_probs=85.5
Q ss_pred CCchHHHHHHHHHhCCeeEEEeC-------CeeEEEecCHHHHHHHHHhcccccCCCCCcccc-ccCccccCCcceeeCC
Q 038027 50 GKPHKSLAKLAKIHGPIMSLRLG-------QVTTVVISSPSMAKAILKEHDSLFCDRKVPESI-LSQPYQHHEFSLVWLP 121 (167)
Q Consensus 50 ~~~~~~~~~~~~~yg~i~~~~~~-------~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 121 (167)
.+++..+.+++ +||||+++.++ +.++++++||+++++++.++ ..|.+++..... ....++..+.++++.
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~- 120 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVL- 120 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGC-
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccC-
Confidence 45778888886 68999999886 67899999999999999864 467776532000 001111113555554
Q ss_pred CChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 122 VSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 122 ~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+.
T Consensus 121 dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~ 162 (435)
T 2wm5_A 121 DDPRHQRLRSIV-SRAFTPKVVARIEAAVRDRAHRLVSSMIAN 162 (435)
T ss_dssp CTTHHHHHHHHH-HHTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 599999999999 799999999999999999999999999764
No 58
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.48 E-value=9.8e-14 Score=101.56 Aligned_cols=110 Identities=15% Similarity=0.074 Sum_probs=84.3
Q ss_pred CCCchHHHHHHHHHhCCeeEEEeCC--eeEEEecCHHHHHHHHHhcccccCCCCCccccccCccccC--C-cceeeCCCC
Q 038027 49 GGKPHKSLAKLAKIHGPIMSLRLGQ--VTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHH--E-FSLVWLPVS 123 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg~i~~~~~~~--~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~g 123 (167)
..+++..+.++++ ||||+++...| .+++++++++++++++.+ ...|.+++..... ...... . .+.++..+|
T Consensus 36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~-~~~fs~~~~~~~~--~~~~~~~~~~~~~l~~~dg 111 (415)
T 3mgx_A 36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAP-SAPLTSEYGMMIG--FDRDHPDNSGGRMMVVSEH 111 (415)
T ss_dssp STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCT-TSSEECTTCSSTT--CCSSSCCTTTTTSGGGCCH
T ss_pred cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhC-hhhhcCCcccccc--ccccccccccCCCccccCc
Confidence 3578999999987 89999986455 789999999999999954 3457666543322 111110 1 233455569
Q ss_pred hHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 124 PLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 124 ~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 112 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~ 150 (415)
T 3mgx_A 112 EQHRKLRKLV-GPLLSRAAARKLAERVRIEVGDVLGRVLD 150 (415)
T ss_dssp HHHHHHHHHH-GGGSSHHHHHHSHHHHHHHHHHHTTTSSS
T ss_pred HHHHHHHHHh-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999 79999999999999999999999988754
No 59
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.48 E-value=2e-13 Score=99.76 Aligned_cols=110 Identities=17% Similarity=0.197 Sum_probs=83.6
Q ss_pred CCCCchHHHHHHHHHhCCeeEEEe-CCeeEEEecCHHHHHHHHHhcccccCCCC-Ccccc----ccC---cccc-C-Ccc
Q 038027 48 LGGKPHKSLAKLAKIHGPIMSLRL-GQVTTVVISSPSMAKAILKEHDSLFCDRK-VPESI----LSQ---PYQH-H-EFS 116 (167)
Q Consensus 48 ~~~~~~~~~~~~~~~yg~i~~~~~-~~~~~v~~~~p~~i~~i~~~~~~~~~~~~-~~~~~----~~~---~~~~-~-~~~ 116 (167)
+..+++..+.++ ++||||+++++ ++.++++++||+++++++.++. +.+++ ..... ... .++. . +.+
T Consensus 15 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (411)
T 1gwi_A 15 FVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRS 91 (411)
T ss_dssp TCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSS
T ss_pred ccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhccccc
Confidence 456889999999 99999999997 8899999999999999997643 33332 01100 000 0000 1 234
Q ss_pred eeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHH
Q 038027 117 LVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVE 162 (167)
Q Consensus 117 ~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~ 162 (167)
+ +..+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.|.
T Consensus 92 l-~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~ 135 (411)
T 1gwi_A 92 M-LTVDGAEHRRLRTLV-AQALTVRRVEHMRGRITELTDRLLDELP 135 (411)
T ss_dssp G-GGCCHHHHHHHHHHH-TTTSCHHHHHTTHHHHHHHHHHHHHTSC
T ss_pred c-ccCCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 455699999999999 7999999999999999999999999875
No 60
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.46 E-value=2e-13 Score=100.19 Aligned_cols=110 Identities=14% Similarity=0.113 Sum_probs=84.4
Q ss_pred CCCchHHHHHHHHHhCCeeEEEeC--CeeEEEecCHHHHHHHHHhcccccCCCCCc--------cccc---cCccc-cCC
Q 038027 49 GGKPHKSLAKLAKIHGPIMSLRLG--QVTTVVISSPSMAKAILKEHDSLFCDRKVP--------ESIL---SQPYQ-HHE 114 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg~i~~~~~~--~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~--------~~~~---~~~~~-~~~ 114 (167)
..+++..+.++++ ||||++++++ +.++++++||+++++++.++ .|.+++.. .... +..+. ..+
T Consensus 19 ~~~p~~~~~~l~~-~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (425)
T 2z3t_A 19 IADPYPVYRRYRE-AAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE 95 (425)
T ss_dssp HHCCHHHHHHHHH-HCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred hcChHHHHHHHHh-cCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence 3578889988865 9999999987 77899999999999999764 67766531 1000 00011 112
Q ss_pred cceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 115 FSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 115 ~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
.++++. +|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 96 ~~l~~~-dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~ 142 (425)
T 2z3t_A 96 NWLVFL-DPPHHTELRSLL-TTEFSPSIVTGLRPRIAELASALLDRLRA 142 (425)
T ss_dssp TCGGGC-CHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccC-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555554 599999999999 79999999999999999999999999864
No 61
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.45 E-value=2.8e-13 Score=100.09 Aligned_cols=106 Identities=14% Similarity=0.082 Sum_probs=83.8
Q ss_pred chHHHHHHHHHhCCee--EEE-eCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCcc-----------c--cCCc
Q 038027 52 PHKSLAKLAKIHGPIM--SLR-LGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPY-----------Q--HHEF 115 (167)
Q Consensus 52 ~~~~~~~~~~~yg~i~--~~~-~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~-----------~--~~~~ 115 (167)
++..+.++ ++||||+ ++. +++.+++++++++++++++.++ ..|.+++..... ... + ..+.
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~--~~~~~~~~~~~~~gg~~~~~~ 122 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVF--TLRVGEMMAKAITGGSPHLVE 122 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSC--CCHHHHHHHHHHHTSCSCSSC
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccc--ccccccccccccccccccccc
Confidence 77888888 5789999 887 6778999999999999999664 667766543331 110 0 0123
Q ss_pred ceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 116 SLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 116 ~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
+ ++..+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 123 ~-l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~ 168 (450)
T 3tkt_A 123 S-LVQMDAPKHPKLRRLT-QDWFMPKNLARLDGEIRKIANEAIDRMLG 168 (450)
T ss_dssp C-GGGCCTTHHHHHHHHH-HTTTSHHHHGGGHHHHHHHHHHHHHHHHH
T ss_pred C-cccCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4 4455699999999999 79999999999999999999999999976
No 62
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.43 E-value=1.5e-13 Score=100.68 Aligned_cols=107 Identities=16% Similarity=0.224 Sum_probs=83.2
Q ss_pred CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCC-----cc-c-cccCccccC-CcceeeC
Q 038027 49 GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKV-----PE-S-ILSQPYQHH-EFSLVWL 120 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~-----~~-~-~~~~~~~~~-~~~~~~~ 120 (167)
..+++..+.++ ++||||++ + ++.+++++++|+++++++.++. |.+++. .. . . ...++.. +.++++
T Consensus 25 ~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~- 97 (419)
T 1q5d_A 25 AEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSA-IPELSDMKKYGLFG- 97 (419)
T ss_dssp TTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHS-SGGGHHHHHHSTTT-
T ss_pred hhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccc-cchhhhhccccccc-
Confidence 56889999998 68999999 5 7778999999999999997653 777651 11 1 0 0111111 244444
Q ss_pred CCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 121 PVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 121 ~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
.+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 98 ~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~ 139 (419)
T 1q5d_A 98 LPPEDHARVRKLV-NPSFTSRAIDLLRAEIQRTVDQLLDARSG 139 (419)
T ss_dssp SCHHHHHHHHHHH-GGGGSHHHHGGGHHHHHHHHHHHHHHHTT
T ss_pred CCchHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4699999999999 79999999999999999999999999864
No 63
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.43 E-value=4.4e-13 Score=97.49 Aligned_cols=103 Identities=13% Similarity=0.048 Sum_probs=81.7
Q ss_pred CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCccccCCcceeeCCCChHHHH
Q 038027 49 GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRS 128 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~ 128 (167)
..+++..+.++++ ||||+++. .+++++++|+++++++.++ ..|.+++... . ... .+.++++ .+|+.|++
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~--~~~--~~~~l~~-~~g~~h~~ 85 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQP-ELFSNAGGIR-P--DQP--ALPMMID-MDDPAHLL 85 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCT-TTEESTTCSS-T--TSC--CCSSGGG-CCTTHHHH
T ss_pred ccChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCc-ccccCccccC-C--ccc--ccccccc-cCchHHHH
Confidence 3678899999987 99999764 3799999999999999764 3677665432 1 111 2345444 45999999
Q ss_pred HHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 129 LRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 129 ~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
+|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 86 ~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~ 119 (398)
T 2xkr_A 86 RRKLV-NAGFTRKRVKDKEASIAALCDTLIDAVCE 119 (398)
T ss_dssp HHHHH-GGGSCHHHHHTTHHHHHHHHHHHHHTTTT
T ss_pred HHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999 79999999999999999999999998854
No 64
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.42 E-value=1.2e-13 Score=101.77 Aligned_cols=105 Identities=20% Similarity=0.233 Sum_probs=73.6
Q ss_pred CCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCccccCCcceeeCCCChHHHHH
Q 038027 50 GKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRSL 129 (167)
Q Consensus 50 ~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 129 (167)
.+++..+.++ ++||||+++..++ ++++++|+++++|+.++. .|.+++..... ... .+.+.++..+|+.|+++
T Consensus 53 ~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~--~~~--~~~~~l~~~dg~~h~~~ 124 (441)
T 3nc3_A 53 NNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERA--EPV--MRGPVLAQMHGKEHSAK 124 (441)
T ss_dssp HCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCC--CCS--CC-------------CC
T ss_pred cChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-ccccccccccc--ccc--cCCCccccCCcHHHHHH
Confidence 5677778776 5799999987665 899999999999997654 37666544332 221 23444455569999999
Q ss_pred HhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 130 RKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 130 R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
|+++ ++.|+.+.++.+.+.+.++++++++.|.+
T Consensus 125 Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~ 157 (441)
T 3nc3_A 125 RRIV-VRSFIGDALDHLSPLIKQNAENLLAPYLE 157 (441)
T ss_dssp HHHH-HHHHHHTHHHHHHHHHHHHHHHHHTTTTT
T ss_pred HHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999 79999999999999999999999998864
No 65
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=99.40 E-value=2.6e-12 Score=93.94 Aligned_cols=123 Identities=13% Similarity=0.139 Sum_probs=86.8
Q ss_pred CCCccccccc---cCCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCcccc-ccCcccc
Q 038027 37 RPYPVIGNLL---ELGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESI-LSQPYQH 112 (167)
Q Consensus 37 ~~~p~~g~~~---~~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~-~~~~~~~ 112 (167)
.++|.+|--+ .+..+|+..+.++++ +|||++. .+.+++++++++++++++.+. ..|.+....... .......
T Consensus 18 ~~~P~~~~dp~~~~~~~dP~~~~~~lR~-~gPV~~~--~~~~~~~vt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~ 93 (412)
T 4dnj_A 18 AGVPHLGIDPFALDYFADPYPEQETLRE-AGPVVYL--DKWNVYGVARYAEVYAVLNDP-LTFCSSRGVGLSDFKKEKPW 93 (412)
T ss_dssp TTSCEECCCTTSHHHHHSCHHHHHHHHH-HCSSEEE--TTTTEEEECSHHHHHHHHTCT-TTEESTTCSSSSCTTTSCCS
T ss_pred CCCCccCCCCCCHHHHhCcHHHHHHHHh-cCCEEEE--CCCCEEEECCHHHHHHHHcCC-ccccCCCccccccccccccc
Confidence 3467665211 224678889988876 6999865 455789999999999999653 334332221111 0011111
Q ss_pred CCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 113 HEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 113 ~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
...+.++..+|++|+++|+++ +++|+.++++.+.+.+.+.++++++.+.+.
T Consensus 94 ~~~~~~~~~Dg~~H~r~R~~~-~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~ 144 (412)
T 4dnj_A 94 RPPSLILEADPPAHTRTRAVL-SKVLSPATMKRLRDGFAAAADAKIDELLAR 144 (412)
T ss_dssp SCCCTTTTCCTTHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCccccCChHHHHHHHhhc-ccccCHHHHHHhhHHHHHHHHHHHHhhhcc
Confidence 234455666799999999999 799999999999999999999999998764
No 66
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.39 E-value=6.8e-13 Score=96.54 Aligned_cols=104 Identities=17% Similarity=0.214 Sum_probs=73.5
Q ss_pred HHHHHHHHhCCeeEEEeC-Ce---eEEEecCHHHHHHHHHhcccccCCCCCc------ccc-ccCccccCCcceeeCCCC
Q 038027 55 SLAKLAKIHGPIMSLRLG-QV---TTVVISSPSMAKAILKEHDSLFCDRKVP------ESI-LSQPYQHHEFSLVWLPVS 123 (167)
Q Consensus 55 ~~~~~~~~yg~i~~~~~~-~~---~~v~~~~p~~i~~i~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~g 123 (167)
.+.+|+++ |||+++.++ |. ++++++||+++++++.++ ..|.+++.. ... ..... ..+.++++ .+|
T Consensus 18 ~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~-~~g 93 (398)
T 1lfk_A 18 PADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPR-ELVGNLMD-YDP 93 (398)
T ss_dssp ECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC--------------CCTTCGGG-CCT
T ss_pred hhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCccccccc-ccccCccc-cCC
Confidence 34457776 999999875 55 899999999999999432 345555431 100 00111 12345544 459
Q ss_pred hHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 124 PLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 124 ~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 94 ~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~ 132 (398)
T 1lfk_A 94 PEHTRLRRKL-TPGFTLRKMQRMAPYIEQIVNDRLDEMER 132 (398)
T ss_dssp THHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999 79999999999999999999999999964
No 67
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=99.37 E-value=6.5e-13 Score=96.61 Aligned_cols=105 Identities=17% Similarity=0.223 Sum_probs=82.0
Q ss_pred CCCCchHHHHHHHHHhCCeeEEEe-CCeeEEEecCHHHHHHHHHhcccccC-C-CCCc--cccccC--cccc-CCcceee
Q 038027 48 LGGKPHKSLAKLAKIHGPIMSLRL-GQVTTVVISSPSMAKAILKEHDSLFC-D-RKVP--ESILSQ--PYQH-HEFSLVW 119 (167)
Q Consensus 48 ~~~~~~~~~~~~~~~yg~i~~~~~-~~~~~v~~~~p~~i~~i~~~~~~~~~-~-~~~~--~~~~~~--~~~~-~~~~~~~ 119 (167)
+..+++..+.+| ++||||+++++ ++.++++++||+++++++.++ .|. + ++.. ... . .+.. .+.++++
T Consensus 14 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~--~~~~~~~~~~~~l~~ 88 (396)
T 1n40_A 14 RGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRL--NALTVPPEVVNNMGN 88 (396)
T ss_dssp CSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCS--SCCSSCGGGGGHHHH
T ss_pred cccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCcccccccc--ccccCCchhhhhhhh
Confidence 356889999999 99999999997 789999999999999999754 354 3 3221 111 1 1111 2345544
Q ss_pred CCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 120 LPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 120 ~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
. .|+++|+++ ++.|+.+ ++.+.+.+.++++++++.+.+
T Consensus 89 ~----~h~~~R~~~-~~~fs~~-~~~~~~~i~~~~~~l~~~l~~ 126 (396)
T 1n40_A 89 I----ADAGLRKAV-MKAITPK-APGLEQFLRDTANSLLDNLIT 126 (396)
T ss_dssp H----HHTTCHHHH-HHHTSSC-STTHHHHHHHHHHHHHHHHHH
T ss_pred H----HHHHHHHHH-HHhhChH-HHHhHHHHHHHHHHHHHHHHh
Confidence 4 999999999 7999999 999999999999999999975
No 68
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=99.36 E-value=4.8e-12 Score=92.91 Aligned_cols=109 Identities=13% Similarity=0.018 Sum_probs=82.0
Q ss_pred CCCchHHHHHHHHHhCCeeEEEe-CCeeEEEecCHHHHHHHHHhcccccCCCCC---ccccccC-----ccccCCcceee
Q 038027 49 GGKPHKSLAKLAKIHGPIMSLRL-GQVTTVVISSPSMAKAILKEHDSLFCDRKV---PESILSQ-----PYQHHEFSLVW 119 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg~i~~~~~-~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~ 119 (167)
..+++..+.+++++ |||+++.. ++.+++++++++++++++.+. ..|.+++. .... . .......+.++
T Consensus 37 ~~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~--~~~~~~~~~~~~~~~l~ 112 (426)
T 3rwl_A 37 NDSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIID--DGIQKGGDGGLDLPNFI 112 (426)
T ss_dssp TTCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSS--CCC-------CCCCCGG
T ss_pred cCCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcc--cccccccccccccCccc
Confidence 45789999999876 99999976 567799999999999999764 34554431 1111 1 00111223345
Q ss_pred CCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHH
Q 038027 120 LPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVE 162 (167)
Q Consensus 120 ~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~ 162 (167)
..+|+.|+++|+++ ++.|+.++++.+.+.+.+++.++++.+.
T Consensus 113 ~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~ 154 (426)
T 3rwl_A 113 AMDRPRHDEQRKAV-SPIVAPANLAALEGTIRERVSKTLDGLP 154 (426)
T ss_dssp GCCTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred ccCchHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 55699999999999 7999999999999999999999999874
No 69
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.34 E-value=2.7e-12 Score=93.90 Aligned_cols=105 Identities=17% Similarity=0.191 Sum_probs=77.7
Q ss_pred CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCcc------c-cCCcceeeCC
Q 038027 49 GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPY------Q-HHEFSLVWLP 121 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~ 121 (167)
..+++..+.++ ++||||+++.++ ++++++|+++++++.+. ..+.+++..... .... . ..+.++ +..
T Consensus 28 ~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l-~~~ 100 (418)
T 3r9b_A 28 RADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIF-QRQLAAETQPRPQGPASF-LFL 100 (418)
T ss_dssp TTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHH-HHHHC---------CCCG-GGC
T ss_pred ccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCccccccc-ccccccccccccccccch-hhc
Confidence 57899999988 578999998665 89999999999999653 333333321111 0000 0 112444 444
Q ss_pred CChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHH
Q 038027 122 VSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVE 162 (167)
Q Consensus 122 ~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~ 162 (167)
+|+.|+++|+++ ++.|+.++++.+.+.+.++++++++ +.
T Consensus 101 dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~-l~ 139 (418)
T 3r9b_A 101 DPPDHTRLRGLV-SKAFAPRVIKRLEPEITALVDQLLD-AV 139 (418)
T ss_dssp CTTHHHHHHHHH-HGGGSHHHHGGGHHHHHHHHHHHHH-TC
T ss_pred CCchHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHh-hh
Confidence 599999999999 7999999999999999999999998 64
No 70
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.33 E-value=4.3e-12 Score=91.39 Aligned_cols=102 Identities=19% Similarity=0.299 Sum_probs=76.0
Q ss_pred chHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCC-----ccccccCc--ccc-CCcceeeCCCC
Q 038027 52 PHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKV-----PESILSQP--YQH-HEFSLVWLPVS 123 (167)
Q Consensus 52 ~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~-----~~~~~~~~--~~~-~~~~~~~~~~g 123 (167)
++..+.++ ++||||+++ | +.+++++|+++++++.+. ..|.+++. ........ ++. .+.+++ ..+|
T Consensus 1 p~~~~~~l-r~~Gpv~~~---g-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~g 73 (368)
T 1io7_A 1 MYDWFSEM-RKKDPVYYD---G-NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTML-TSDP 73 (368)
T ss_dssp CHHHHHHH-HHHCSEEEC---S-SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGG-GCCT
T ss_pred CCHHHHHH-HhcCCeEeE---C-CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccc-cCCC
Confidence 35567777 589999987 4 589999999999999863 46777654 11000011 111 124444 4459
Q ss_pred hHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHH
Q 038027 124 PLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYV 161 (167)
Q Consensus 124 ~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l 161 (167)
+.|+++|+++ ++.|+.++++.+.+.+.++++++++.+
T Consensus 74 ~~h~~~R~~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l 110 (368)
T 1io7_A 74 PLHDELRSMS-ADIFSPQKLQTLETFIRETTRSLLDSI 110 (368)
T ss_dssp THHHHHHGGG-TTTTCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999 799999999999999999999999987
No 71
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.32 E-value=1.3e-12 Score=95.00 Aligned_cols=106 Identities=16% Similarity=0.114 Sum_probs=79.1
Q ss_pred CCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCcccc----ccCccccC-CcceeeCCCCh
Q 038027 50 GKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESI----LSQPYQHH-EFSLVWLPVSP 124 (167)
Q Consensus 50 ~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~g~ 124 (167)
.+++..+.++ ++||||++ + |.+++++++|+++++++.+ ..|.+++..... ........ +.++++. +|+
T Consensus 13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~ 85 (397)
T 3buj_A 13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQ-DEP 85 (397)
T ss_dssp HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGC-CTT
T ss_pred cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccC-Cch
Confidence 4678888776 58999998 6 6789999999999999975 345543211100 00011111 3555444 599
Q ss_pred HHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHH
Q 038027 125 LWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEE 163 (167)
Q Consensus 125 ~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~ 163 (167)
.|+++|+++ ++.|+.++++.+.+.+.++++++++.+.+
T Consensus 86 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~ 123 (397)
T 3buj_A 86 DHGRLRGVV-GPAFSPSALRRLEPVIAGTVDDLLRPALA 123 (397)
T ss_dssp HHHHHHHHH-GGGSSTTTTGGGHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999 79999999999999999999999999874
No 72
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=99.24 E-value=8.1e-12 Score=89.16 Aligned_cols=88 Identities=16% Similarity=0.226 Sum_probs=68.3
Q ss_pred HHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCccccCCcceeeCCCChHHHHHHhHhhhccCch
Q 038027 61 KIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTN 140 (167)
Q Consensus 61 ~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~ 140 (167)
++||||+++ | ++++++|+++++++.++ ..|.+++.. . .. ...+.++++ .+|+.|+++|+++ ++.|+.
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~--~--~~-~~~~~~l~~-~~g~~~~~~R~~~-~~~fs~ 68 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGN--R--YS-NAGGISFIT-MDNPEHKEFRDIS-APYFLP 68 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSS--C--CC----CCGGGG-CCHHHHHHHHHHH-HHHHSH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcC--C--CC-Ccccccccc-CCchHHHHHHHHh-hhhcCH
Confidence 579999986 3 89999999999999864 367766521 1 11 112355544 4699999999999 799999
Q ss_pred hhHHHhHHHHHHHHHHHHHHH
Q 038027 141 QKLDANQDLRRKKIKDLLAYV 161 (167)
Q Consensus 141 ~~l~~~~~~~~~~~~~~~~~l 161 (167)
++++.+.+.+.++++++++.+
T Consensus 69 ~~l~~~~~~i~~~~~~l~~~l 89 (343)
T 2rfb_A 69 SKINDYKDFIEETSNDLIKNI 89 (343)
T ss_dssp HHHGGGHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998765
No 73
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=99.22 E-value=2.6e-11 Score=87.33 Aligned_cols=101 Identities=16% Similarity=0.215 Sum_probs=73.1
Q ss_pred chHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccc-cc-----c-CccccC-CcceeeCCCC
Q 038027 52 PHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPES-IL-----S-QPYQHH-EFSLVWLPVS 123 (167)
Q Consensus 52 ~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~-~~-----~-~~~~~~-~~~~~~~~~g 123 (167)
++..+.+++ +||||+++. | .+++++|+++++++.++ ..|.+++.... .. . ...+.. +.++++. +|
T Consensus 1 p~~~~~~lr-~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-dg 73 (367)
T 3b4x_A 1 MYDWFKQMR-KESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTS-DP 73 (367)
T ss_dssp CHHHHHHHH-HHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGC-CT
T ss_pred CCHHHHHHH-HcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccC-Cc
Confidence 345677774 799999987 3 89999999999999864 36766642111 10 0 111100 2455554 59
Q ss_pred hHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHH
Q 038027 124 PLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVE 162 (167)
Q Consensus 124 ~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~ 162 (167)
+.|+++|+++ ++.|+.++++. +.+.++++++++.+.
T Consensus 74 ~~h~~~R~~~-~~~fs~~~l~~--~~i~~~~~~l~~~l~ 109 (367)
T 3b4x_A 74 PLHDELRNLT-ADAFNPSNLPV--DFVREVTVKLLSELD 109 (367)
T ss_dssp THHHHHHHTT-GGGGSGGGSCH--HHHHHHHHHHHHTCC
T ss_pred hhHHHHHHHH-HHhcCHhhhcc--hHHHHHHHHHHHhcc
Confidence 9999999999 79999999988 999999999998763
No 74
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=99.12 E-value=1.8e-11 Score=89.51 Aligned_cols=107 Identities=12% Similarity=0.102 Sum_probs=75.5
Q ss_pred CCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCcc--cc--ccCccccCCcceeeCCCCh
Q 038027 49 GGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPE--SI--LSQPYQHHEFSLVWLPVSP 124 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~g~ 124 (167)
..+++.. ++.++|||++++.+++.. +++++++++++++.++. +....... .. ..........+.++..+|+
T Consensus 32 ~~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 106 (416)
T 3p3o_A 32 PNFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGA 106 (416)
T ss_dssp TTCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCCHH
T ss_pred ccCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCCch
Confidence 3567666 455679999999886656 99999999999997643 22211100 00 0000000012234555699
Q ss_pred HHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHH
Q 038027 125 LWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYV 161 (167)
Q Consensus 125 ~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l 161 (167)
+|+++|+++ ++.|+.++++.+.+.+.++++++++.+
T Consensus 107 ~h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l 142 (416)
T 3p3o_A 107 DHRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKL 142 (416)
T ss_dssp HHHHHHHTT-CGGGSHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999 799999999999999999999999987
No 75
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=99.02 E-value=2.8e-10 Score=82.70 Aligned_cols=103 Identities=20% Similarity=0.176 Sum_probs=74.9
Q ss_pred CCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCccccCCcceeeCCCChHHHHH
Q 038027 50 GKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWRSL 129 (167)
Q Consensus 50 ~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 129 (167)
.+++..+.+++++ |||+++..+ .+++++++++++++.+ ..|..++..... ......+.+ ++..+|+.|+++
T Consensus 20 ~dp~~~~~~lr~~-~pv~~~~~g---~~~v~~~~~v~~~l~d--~~fs~~~~~~~~--~~~~~~~~~-l~~~dg~~h~~~ 90 (394)
T 2wiy_A 20 NNPYPWYRRLQQD-HPVHKLEDG---TYLVSRYADVSHFAKL--PIMSVEPGWADA--GPWAVASDT-ALGSDPPHHTVL 90 (394)
T ss_dssp HCCHHHHHHHHHH-CSEEECTTS---CEEECCHHHHHHHTTS--TTEECHHHHHTC--GGGGGGGGS-GGGCCTTHHHHH
T ss_pred cCccHHHHHHHhc-CCeEEecCC---eEEEcCHHHHHHHHcC--CCcccccccccc--ccchhcccc-cccCCchHHHHH
Confidence 4788888888765 899987532 6899999999999954 244332211111 111011233 455569999999
Q ss_pred HhHhhhccCchhhHHHhHHHHHHHHHHHHHHHH
Q 038027 130 RKICNMHIFTNQKLDANQDLRRKKIKDLLAYVE 162 (167)
Q Consensus 130 R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~ 162 (167)
|+++ ++.|+.++++.+.+.+.+.+.++++.+.
T Consensus 91 R~~~-~~~fs~~~~~~~~~~i~~~~~~l~~~~~ 122 (394)
T 2wiy_A 91 RRQT-NKWFTPKLVDGWVRTTRELVGDLLDGVE 122 (394)
T ss_dssp HHHH-HTTCSHHHHHHHTHHHHHHHHHHHHTCC
T ss_pred HHHH-HhccCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999 7999999999999999999999998774
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=99.01 E-value=3.1e-09 Score=77.85 Aligned_cols=110 Identities=10% Similarity=-0.010 Sum_probs=78.4
Q ss_pred CCCchHHHHHHHHHhC-CeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCccccccCccccCCcceeeCCCChHHH
Q 038027 49 GGKPHKSLAKLAKIHG-PIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESILSQPYQHHEFSLVWLPVSPLWR 127 (167)
Q Consensus 49 ~~~~~~~~~~~~~~yg-~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~ 127 (167)
..+++..+.++++..+ +++.. -.+...+++++++++++++.+ ...|++....... ..+......+...|+++|+
T Consensus 36 ~~~~~~~~~~lr~~~~~~~~~~-~~~gg~W~vtr~~dv~~vl~d-~~~fs~~~~~~~~---~~~~~~~~~~~~~D~p~H~ 110 (417)
T 4dxy_A 36 EDGYHEAWKKVQHPGIPDLIWT-PFTGGHWIATNGDTVKEVYSD-PTRFSSEVIFLPK---EAGEKAQMVPTKMDPPEHT 110 (417)
T ss_dssp GGCHHHHHHHHSCTTCCSEEEE-SSTTSEEEECSHHHHHHHHTC-TTTEESSCCSSST---TSSCSSCTTTTTCCTTTHH
T ss_pred hcChHHHHHHHHhhCCCCEEec-CCCCCEEEECCHHHHHHHHcC-chhccCCCccccc---ccccccccCcccCCcHHHH
Confidence 3567888888877643 34433 233357889999999999964 3355544322221 1111233444555799999
Q ss_pred HHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHHh
Q 038027 128 SLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEEN 164 (167)
Q Consensus 128 ~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~ 164 (167)
++|+++ ++.||.++++.+.+.+.+.++++++.+.+.
T Consensus 111 r~Rrll-~~~Fs~~~l~~~~~~i~~~~~~lld~l~~~ 146 (417)
T 4dxy_A 111 PYRKAL-DKGLNLAKIRKVEDKVREVASSLIDSFAAR 146 (417)
T ss_dssp HHHHHH-HHHHCHHHHHTTHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 999999 799999999999999999999999998764
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=97.46 E-value=3.5e-07 Score=66.18 Aligned_cols=109 Identities=13% Similarity=0.143 Sum_probs=68.2
Q ss_pred CCCC-CCCCcccccccc-----CCCCchHHHHHHHHHhCCeeEEEeCCeeEEEecCHHHHHHHHHhcccccCCCCCcccc
Q 038027 32 LPPG-PRPYPVIGNLLE-----LGGKPHKSLAKLAKIHGPIMSLRLGQVTTVVISSPSMAKAILKEHDSLFCDRKVPESI 105 (167)
Q Consensus 32 ~~pg-p~~~p~~g~~~~-----~~~~~~~~~~~~~~~yg~i~~~~~~~~~~v~~~~p~~i~~i~~~~~~~~~~~~~~~~~ 105 (167)
.+|| ++++|++|+... +..+++..+.+++++ ||++.. .+.+++++++++++++.+ ..|.+++.....
T Consensus 35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d--~~f~~~~~~~~~ 107 (381)
T 2yjn_B 35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDD--PAFTRATGRTPE 107 (381)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHC--SSEESSCCCCCH
T ss_pred CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcC--CCcCCCcccccc
Confidence 3566 446799997644 356889999999876 998764 468999999999999975 356655321100
Q ss_pred c----cCccccCCcceeeCCCChHHHHHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHH
Q 038027 106 L----SQPYQHHEFSLVWLPVSPLWRSLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVE 162 (167)
Q Consensus 106 ~----~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~ 162 (167)
. .......+.++++. +|++| ++.|+ . .+.+.+.++++++.+.
T Consensus 108 ~~~~~~~~~~~~~~~l~~~-dg~~H--------~~~Ft-----~-~~~i~~~~~~ll~~~~ 153 (381)
T 2yjn_B 108 WMRAAGAPPAEWAQPFRDV-HAASW--------EGEVP-----D-VGELAESFAGLLPGAG 153 (381)
T ss_dssp HHHHHTCCHHHHTHHHHHH-HHCCC--------CSCCC-----C-CSCHHHHTSTTSCC--
T ss_pred cccccccccchhhhhhhhC-Cchhh--------hhccC-----C-hHHHHHHHHHHHHhcc
Confidence 0 00011112344444 48888 37787 2 6667777777776553
No 78
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=65.65 E-value=16 Score=20.63 Aligned_cols=49 Identities=14% Similarity=0.211 Sum_probs=34.9
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC--------CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG--------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~--------~~~~v~~~~p~~i~~i~~~ 91 (167)
++|+++. .-..+.+.++..+||+|..+.+. |.-.|...+++.+..++..
T Consensus 15 fV~~Lp~--~~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~ 71 (103)
T 1s79_A 15 YIKGFPT--DATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 71 (103)
T ss_dssp EEECCCT--TCCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTS
T ss_pred EEECCCC--CCCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHc
Confidence 4566643 23456678888999998887653 3456778899999888853
No 79
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=62.51 E-value=14 Score=18.96 Aligned_cols=40 Identities=15% Similarity=0.251 Sum_probs=29.6
Q ss_pred chHHHHHHHHHhCCeeEEEeC---------CeeEEEecCHHHHHHHHHh
Q 038027 52 PHKSLAKLAKIHGPIMSLRLG---------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 52 ~~~~~~~~~~~yg~i~~~~~~---------~~~~v~~~~p~~i~~i~~~ 91 (167)
..+.+.++..+||+|..+.+. |.-.+-..+++.++..+..
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~ 60 (75)
T 1iqt_A 12 PEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 60 (75)
T ss_dssp CHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTT
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHh
Confidence 456678888999998887653 2346677888888888764
No 80
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=59.20 E-value=18 Score=19.04 Aligned_cols=39 Identities=18% Similarity=0.139 Sum_probs=30.3
Q ss_pred hHHHHHHHHHhCCeeEEEeC-------CeeEEEecCHHHHHHHHHh
Q 038027 53 HKSLAKLAKIHGPIMSLRLG-------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 53 ~~~~~~~~~~yg~i~~~~~~-------~~~~v~~~~p~~i~~i~~~ 91 (167)
.+.+.+...+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 21 ~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 21 KNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred HHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 46778888999999888764 3456778899988888753
No 81
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=52.53 E-value=23 Score=20.52 Aligned_cols=66 Identities=15% Similarity=0.187 Sum_probs=38.8
Q ss_pred CCCCCCCccccccccCC--------CCchHHHHHHHHHhCCeeEEEeC-----CeeEEEecCHHHHHHHHHh-cccccCC
Q 038027 33 PPGPRPYPVIGNLLELG--------GKPHKSLAKLAKIHGPIMSLRLG-----QVTTVVISSPSMAKAILKE-HDSLFCD 98 (167)
Q Consensus 33 ~pgp~~~p~~g~~~~~~--------~~~~~~~~~~~~~yg~i~~~~~~-----~~~~v~~~~p~~i~~i~~~-~~~~~~~ 98 (167)
+|.|...=.+.|+.... ....+.+.+...+||.|..+.+. |.-.|-..+++.+...+.. ++..|.+
T Consensus 3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~G 82 (114)
T 3s6e_A 3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAG 82 (114)
T ss_dssp CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 34555544555655541 11233446667899998888762 4456677888877766643 4444433
No 82
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=50.54 E-value=24 Score=18.01 Aligned_cols=39 Identities=10% Similarity=0.102 Sum_probs=29.0
Q ss_pred chHHHHHHHHHhCCeeEEEeC---------CeeEEEecCHHHHHHHHH
Q 038027 52 PHKSLAKLAKIHGPIMSLRLG---------QVTTVVISSPSMAKAILK 90 (167)
Q Consensus 52 ~~~~~~~~~~~yg~i~~~~~~---------~~~~v~~~~p~~i~~i~~ 90 (167)
..+.+.++..+||+|..+.+. |.-.+-..+++.++.++.
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~ 59 (75)
T 2mss_A 12 TVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 59 (75)
T ss_dssp CHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHS
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 456678888999998887653 234567788998888875
No 83
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=47.65 E-value=38 Score=19.33 Aligned_cols=56 Identities=11% Similarity=0.093 Sum_probs=38.0
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC--CeeEEEecCHHHHHHHHHh-cccccCC
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG--QVTTVVISSPSMAKAILKE-HDSLFCD 98 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~--~~~~v~~~~p~~i~~i~~~-~~~~~~~ 98 (167)
++|++..- --.+.+.++..+||+|..+.+. +.-.|-..+++.++..+.. +...+..
T Consensus 20 ~V~nLp~~--~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 78 (115)
T 3beg_B 20 VVSGLPPS--GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRS 78 (115)
T ss_dssp EEEECCSS--CCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCC
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 46666543 3445677888999999888764 5667778888888887753 3334433
No 84
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=47.02 E-value=37 Score=19.14 Aligned_cols=57 Identities=25% Similarity=0.249 Sum_probs=38.5
Q ss_pred CCCCCCCccccccccCCCCchHHHHHHHHHhCCeeEEEeC------CeeEEEecCHHHHHHHHHh
Q 038027 33 PPGPRPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 33 ~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~------~~~~v~~~~p~~i~~i~~~ 91 (167)
+|.|...=++|+++.- -..+.+.++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 4 ~~~~~~~l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 66 (115)
T 3lqv_A 4 PPEVNRILYIRNLPYK--ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVDH 66 (115)
T ss_dssp CTTCCSEEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHHH
Confidence 3444444457776532 3455678888999999888761 3457778888888877753
No 85
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=44.16 E-value=35 Score=18.01 Aligned_cols=49 Identities=12% Similarity=0.220 Sum_probs=33.4
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC-----C----eeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG-----Q----VTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-----~----~~~v~~~~p~~i~~i~~~ 91 (167)
++|+++.- -..+.+.++..+||+|..+.+. + .-.|-..+++.++..+..
T Consensus 15 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 72 (87)
T 3s7r_A 15 FVGGLSWD--TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 72 (87)
T ss_dssp EEECCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHS
T ss_pred EEeCCCCC--CCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHh
Confidence 46666432 3556778888999998877652 1 245667788888887754
No 86
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=43.87 E-value=43 Score=18.92 Aligned_cols=62 Identities=8% Similarity=0.023 Sum_probs=37.0
Q ss_pred CCCCccccccccC---CCCchHHHHHHHHHhCCeeEEEeC----------CeeEEEecCHHHHHHHHHh-cccccC
Q 038027 36 PRPYPVIGNLLEL---GGKPHKSLAKLAKIHGPIMSLRLG----------QVTTVVISSPSMAKAILKE-HDSLFC 97 (167)
Q Consensus 36 p~~~p~~g~~~~~---~~~~~~~~~~~~~~yg~i~~~~~~----------~~~~v~~~~p~~i~~i~~~-~~~~~~ 97 (167)
|...=.+.|+... ..+..+.+.+...+||+|..+.+. |.-.|-..+++.+...... ++..|.
T Consensus 7 ~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~ 82 (105)
T 2pe8_A 7 PTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFG 82 (105)
T ss_dssp CCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEET
T ss_pred CCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEEC
Confidence 4444456666532 334567788888999998887652 2235667788877766643 444443
No 87
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.12 E-value=45 Score=18.89 Aligned_cols=49 Identities=18% Similarity=0.197 Sum_probs=35.8
Q ss_pred ccccccCCC--CchHHHHHHHHHhC-CeeEEEeCCeeEEEecCHHHHHHHHHh
Q 038027 42 IGNLLELGG--KPHKSLAKLAKIHG-PIMSLRLGQVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 42 ~g~~~~~~~--~~~~~~~~~~~~yg-~i~~~~~~~~~~v~~~~p~~i~~i~~~ 91 (167)
++|+..-.. .....+.++..+|| +|..+ .+|.-.|...+.+.++..+..
T Consensus 14 V~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~ 65 (96)
T 2diu_A 14 VYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKR 65 (96)
T ss_dssp EESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHH
T ss_pred EeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHH
Confidence 677765411 12345778999995 98888 568889999999999887754
No 88
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=42.17 E-value=46 Score=18.77 Aligned_cols=45 Identities=11% Similarity=0.107 Sum_probs=30.4
Q ss_pred HHHHHHHHHhCCeeEEEeC-----------CeeEEEecCHHHHHHHHHh-cccccCC
Q 038027 54 KSLAKLAKIHGPIMSLRLG-----------QVTTVVISSPSMAKAILKE-HDSLFCD 98 (167)
Q Consensus 54 ~~~~~~~~~yg~i~~~~~~-----------~~~~v~~~~p~~i~~i~~~-~~~~~~~ 98 (167)
+.+.+...+||+|..+.+. |.-.|-..+++.+...+.. ++..|..
T Consensus 30 ~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~G 86 (105)
T 3v4m_A 30 EDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFAN 86 (105)
T ss_dssp HHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred HHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeCC
Confidence 4567778899999988763 3345777888877776643 4444433
No 89
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=41.16 E-value=52 Score=19.11 Aligned_cols=63 Identities=13% Similarity=0.142 Sum_probs=38.8
Q ss_pred CCCccccccccC---CCCchHHHHHHHHHhCCeeEEEeC-------------CeeEEEecCHHHHHHHHHh-cccccCCC
Q 038027 37 RPYPVIGNLLEL---GGKPHKSLAKLAKIHGPIMSLRLG-------------QVTTVVISSPSMAKAILKE-HDSLFCDR 99 (167)
Q Consensus 37 ~~~p~~g~~~~~---~~~~~~~~~~~~~~yg~i~~~~~~-------------~~~~v~~~~p~~i~~i~~~-~~~~~~~~ 99 (167)
...=.+.|+... ..+..+-+.+...+||+|..+.+. |.-.|-..+++.+...+.. ++..|..+
T Consensus 20 s~vl~L~Nm~~~~el~ddleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~LnGr~f~GR 99 (118)
T 3ue2_A 20 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGR 99 (118)
T ss_dssp CCEEEEESCSCGGGCCTTHHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHCCCEECCc
Confidence 334455666543 345677788888999998877642 2234557788877766643 44455443
No 90
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=38.79 E-value=51 Score=18.31 Aligned_cols=52 Identities=19% Similarity=0.194 Sum_probs=36.4
Q ss_pred ccccccccCCCC----chHHHHHHHHHhCCeeEEEeC-------CeeEEEecCHHHHHHHHHh
Q 038027 40 PVIGNLLELGGK----PHKSLAKLAKIHGPIMSLRLG-------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 40 p~~g~~~~~~~~----~~~~~~~~~~~yg~i~~~~~~-------~~~~v~~~~p~~i~~i~~~ 91 (167)
=++|+++.-... ..+.+.+...+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 18 l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 18 IVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp EEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred EEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 457777653221 357788899999999988765 4456777888877777754
No 91
>3ezh_A Nitrate/nitrite sensor protein NARX; histidine kinase, sensor domain, four-helix bundle, nitrate sensor, selenomethionyl MAD; HET: MSE; 1.70A {Escherichia coli K12} PDB: 3ezi_A
Probab=38.67 E-value=60 Score=19.11 Aligned_cols=42 Identities=14% Similarity=0.234 Sum_probs=25.7
Q ss_pred ChHHH-HHHhHhhhccCchhhHHHhHHHHHHHHHHHHHHHHHhc
Q 038027 123 SPLWR-SLRKICNMHIFTNQKLDANQDLRRKKIKDLLAYVEENC 165 (167)
Q Consensus 123 g~~w~-~~R~~~~~~~fs~~~l~~~~~~~~~~~~~~~~~l~~~~ 165 (167)
...|. ..|..+ ...-+......-.+.+...++.+|..++..+
T Consensus 66 ~~~W~~~l~p~l-~~~~~~~~~~~~v~~FV~~ID~lV~~LE~~s 108 (125)
T 3ezh_A 66 QDYWRNELIPAL-MRAQNRETVSADVSQFVAGLDQLVSGFDRTT 108 (125)
T ss_dssp HHHHHHTHHHHH-HHCSSGGGTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35787 577777 3443333333445566677778887777654
No 92
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=36.39 E-value=1.2e+02 Score=22.32 Aligned_cols=50 Identities=10% Similarity=0.096 Sum_probs=34.5
Q ss_pred ccccccccCCCCchHHHHHHHHHhCCeeEEEeC---------CeeEEEecCHHHHHHHHHh
Q 038027 40 PVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG---------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 40 p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~v~~~~p~~i~~i~~~ 91 (167)
-++||+..- -..+.+.+++.+||+|..+.+. |.-+|...+++.+..++..
T Consensus 105 lfV~nL~~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 163 (437)
T 3pgw_S 105 LFVARVNYD--TTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163 (437)
T ss_pred EEEeCCCCC--CCHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHH
Confidence 346666432 3456678888999999887662 2356778888888887754
No 93
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=34.37 E-value=56 Score=17.54 Aligned_cols=46 Identities=13% Similarity=0.238 Sum_probs=33.6
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC----CeeEEEecCHHHHHHH
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG----QVTTVVISSPSMAKAI 88 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~----~~~~v~~~~p~~i~~i 88 (167)
++|++.. .--.+.+.+...+||+|..+.+. |.-.|-..+++.++.+
T Consensus 15 ~V~~Lp~--~~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 15 FVGRCTE--DMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp EEESCCT--TCCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 4666643 23556788889999999988874 4567788899888753
No 94
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=33.90 E-value=68 Score=18.35 Aligned_cols=54 Identities=15% Similarity=0.138 Sum_probs=36.7
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC---------CeeEEEecCHHHHHHHHHh-ccccc
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG---------QVTTVVISSPSMAKAILKE-HDSLF 96 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~v~~~~p~~i~~i~~~-~~~~~ 96 (167)
++|++.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.+..++.. +...+
T Consensus 26 ~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~ 89 (126)
T 3ex7_B 26 FVTGVHE--EATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDL 89 (126)
T ss_dssp EEESCCT--TCCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBS
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCee
Confidence 4555543 23456778888999999888762 3456778899988888753 33333
No 95
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=33.41 E-value=69 Score=18.27 Aligned_cols=40 Identities=18% Similarity=0.204 Sum_probs=31.6
Q ss_pred chHHHHHHHHHhCCeeEEEe-CCeeEEEecCHHHHHHHHHh
Q 038027 52 PHKSLAKLAKIHGPIMSLRL-GQVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 52 ~~~~~~~~~~~yg~i~~~~~-~~~~~v~~~~p~~i~~i~~~ 91 (167)
-...+.++...||.+.--|+ -..-.+++.+|+.+++++..
T Consensus 28 Kt~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 68 (100)
T 1whv_A 28 KTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVNT 68 (100)
T ss_dssp CHHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHHH
T ss_pred hhHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 45677888889997776676 45667899999999999863
No 96
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=32.06 E-value=72 Score=18.05 Aligned_cols=49 Identities=20% Similarity=0.181 Sum_probs=34.4
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC-------CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG-------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-------~~~~v~~~~p~~i~~i~~~ 91 (167)
++|++..- --.+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 9 fV~nLp~~--~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 9 FIKNLDKS--IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEESCCTT--CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EECCCCCC--CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 46666432 3456788889999998877652 2346778899998888754
No 97
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=31.96 E-value=66 Score=17.62 Aligned_cols=49 Identities=20% Similarity=0.203 Sum_probs=34.0
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC--------CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG--------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~--------~~~~v~~~~p~~i~~i~~~ 91 (167)
++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 19 ~v~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 75 (105)
T 2dnh_A 19 FVGMLNKQ--QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHA 75 (105)
T ss_dssp EEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 46666432 3456678888999998887653 2345667888888888753
No 98
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.77 E-value=71 Score=17.90 Aligned_cols=47 Identities=11% Similarity=0.075 Sum_probs=31.5
Q ss_pred ccccccCCCCchHHHHHHHHHhCCeeEEEeC---------CeeEEEecCHHHHHHHHH
Q 038027 42 IGNLLELGGKPHKSLAKLAKIHGPIMSLRLG---------QVTTVVISSPSMAKAILK 90 (167)
Q Consensus 42 ~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~v~~~~p~~i~~i~~ 90 (167)
+|++.. .-..+.+.++..+||+|..+.+. |.-.|-..+++.++..+.
T Consensus 30 V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~ 85 (114)
T 2cq4_A 30 CMQLAA--RIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG 85 (114)
T ss_dssp EESCCT--TCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH
T ss_pred EeCCCC--CCCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHH
Confidence 455432 23456678888999999888764 234566778877777763
No 99
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.32 E-value=72 Score=17.84 Aligned_cols=40 Identities=18% Similarity=0.280 Sum_probs=31.2
Q ss_pred chHHHHHHHHHhCCeeEEEeC----CeeEEEecCHHHHHHHHHh
Q 038027 52 PHKSLAKLAKIHGPIMSLRLG----QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 52 ~~~~~~~~~~~yg~i~~~~~~----~~~~v~~~~p~~i~~i~~~ 91 (167)
..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 30 te~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 30 SKDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp CHHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 467788999999999888763 3456778889888888765
No 100
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.94 E-value=67 Score=17.38 Aligned_cols=54 Identities=9% Similarity=0.068 Sum_probs=36.5
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC---------CeeEEEecCHHHHHHHHHhccccc
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG---------QVTTVVISSPSMAKAILKEHDSLF 96 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~v~~~~p~~i~~i~~~~~~~~ 96 (167)
++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..+...+
T Consensus 14 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~ 76 (99)
T 2dgs_A 14 FVGGIPHN--CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDI 76 (99)
T ss_dssp EEESCCSS--CCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBS
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEE
Confidence 45666432 3456678888999999888763 235677889998888886433333
No 101
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=30.12 E-value=69 Score=17.26 Aligned_cols=49 Identities=24% Similarity=0.216 Sum_probs=34.1
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC------------CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG------------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~------------~~~~v~~~~p~~i~~i~~~ 91 (167)
++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 9 ~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 9 FIKNLNFS--TTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp EEESCCTT--CCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 45666432 3456778888999998877653 2345667899998888864
No 102
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=29.76 E-value=1e+02 Score=19.22 Aligned_cols=48 Identities=13% Similarity=0.095 Sum_probs=33.8
Q ss_pred ccccccCCCCchHHHHHHHHHhCCeeEEEeC-----CeeEEEecCHHHHHHHHHh
Q 038027 42 IGNLLELGGKPHKSLAKLAKIHGPIMSLRLG-----QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 42 ~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-----~~~~v~~~~p~~i~~i~~~ 91 (167)
+||+.. .--.+.+.+...+||+|.++.+. +.-.|-..+++.+......
T Consensus 51 VgNL~~--~vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 51 VENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp ECSCCS--CCCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EeCcCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 566643 23456788899999999888763 2356778888888777654
No 103
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=29.51 E-value=56 Score=18.67 Aligned_cols=40 Identities=20% Similarity=0.218 Sum_probs=30.6
Q ss_pred chHHHHHHHHHhCCeeEEEe-CCeeEEEecCHHHHHHHHHh
Q 038027 52 PHKSLAKLAKIHGPIMSLRL-GQVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 52 ~~~~~~~~~~~yg~i~~~~~-~~~~~v~~~~p~~i~~i~~~ 91 (167)
-...+.++...||.+.--|+ -+.-.+++.+|+.+++++..
T Consensus 18 Kt~Di~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 58 (101)
T 3ctr_A 18 KTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNT 58 (101)
T ss_dssp CHHHHHHHTTTSEEEEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred hhHHHHHHHhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 34566778888886666677 45567889999999999974
No 104
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.03 E-value=73 Score=17.20 Aligned_cols=47 Identities=15% Similarity=0.089 Sum_probs=34.2
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC---CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG---QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---~~~~v~~~~p~~i~~i~~~ 91 (167)
++|++ .--.+.+.++..+||+|..+.+. +.-.|-..+++.+...+..
T Consensus 19 ~V~n~----~~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 19 YVYGE----DMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp EEECS----SCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEcCC----CCCHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 45663 34566788899999999888763 4456777889888887754
No 105
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.34 E-value=84 Score=17.64 Aligned_cols=49 Identities=20% Similarity=0.153 Sum_probs=33.8
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC---------CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG---------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~v~~~~p~~i~~i~~~ 91 (167)
++|++.. .--.+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 31 ~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~ 88 (116)
T 1x4b_A 31 FIGGLSF--ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 88 (116)
T ss_dssp EEECCTT--CCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTS
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHh
Confidence 3455533 23456678888999998777652 2456778899999888855
No 106
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=28.22 E-value=77 Score=17.20 Aligned_cols=40 Identities=15% Similarity=0.235 Sum_probs=30.2
Q ss_pred chHHHHHHHHHhCCeeEEEe----CCeeEEEecCHHHHHHHHHh
Q 038027 52 PHKSLAKLAKIHGPIMSLRL----GQVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 52 ~~~~~~~~~~~yg~i~~~~~----~~~~~v~~~~p~~i~~i~~~ 91 (167)
..+.+.++..+||+|..+.+ -+.-.|-..+++.+...+..
T Consensus 13 t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 56 (101)
T 2hvz_A 13 GKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 56 (101)
T ss_dssp SHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHH
Confidence 45667888899999887765 34566778899888888753
No 107
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=28.14 E-value=79 Score=17.30 Aligned_cols=49 Identities=14% Similarity=0.142 Sum_probs=34.9
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEe-CCeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRL-GQVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~-~~~~~v~~~~p~~i~~i~~~ 91 (167)
++|++..- -..+.+.++..+||+|..+.+ -+.-.|-..+++.++..+..
T Consensus 15 ~V~nl~~~--~t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~ 64 (103)
T 2dgu_A 15 FVRNLANT--VTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEE 64 (103)
T ss_dssp EEECCCTT--CCHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHH
Confidence 45666432 345677888899999988876 34456778889888888753
No 108
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=28.07 E-value=73 Score=16.86 Aligned_cols=49 Identities=18% Similarity=0.150 Sum_probs=33.7
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC-------CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG-------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-------~~~~v~~~~p~~i~~i~~~ 91 (167)
++|+++. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 12 ~V~nlp~--~~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 12 FVRNLPF--DFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EECSCCT--TCCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 4566643 24566788888999998877653 2345667888888887754
No 109
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=28.03 E-value=88 Score=17.76 Aligned_cols=49 Identities=29% Similarity=0.344 Sum_probs=34.8
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC--------CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG--------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~--------~~~~v~~~~p~~i~~i~~~ 91 (167)
++|++..- -..+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 11 ~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 67 (116)
T 2fy1_A 11 FIGGLNRE--TNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKD 67 (116)
T ss_dssp EEECCTTT--CCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHH
Confidence 35666432 3456778888999998877653 3456778899988888764
No 110
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.96 E-value=78 Score=17.15 Aligned_cols=49 Identities=24% Similarity=0.293 Sum_probs=34.1
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC--------CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG--------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~--------~~~~v~~~~p~~i~~i~~~ 91 (167)
++|+++. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 21 ~v~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 21 FISGLPF--SCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp EEESCCT--TCCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 4566543 23456678888999998887653 2346778899988888754
No 111
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=27.94 E-value=91 Score=17.95 Aligned_cols=41 Identities=17% Similarity=0.137 Sum_probs=30.7
Q ss_pred CchHHHHHHHHHhCCeeEEEeC---CeeEEEecCHHHHHHHHHh
Q 038027 51 KPHKSLAKLAKIHGPIMSLRLG---QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 51 ~~~~~~~~~~~~yg~i~~~~~~---~~~~v~~~~p~~i~~i~~~ 91 (167)
--.+.+.++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 49 ~te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~ 92 (121)
T 2bz2_A 49 MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 92 (121)
T ss_dssp CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 4566788889999998777653 4566778888888877744
No 112
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=27.82 E-value=1.2e+02 Score=19.22 Aligned_cols=48 Identities=15% Similarity=0.223 Sum_probs=33.4
Q ss_pred ccccccCCCCchHHHHHHHHHhCCeeEEEeC--------CeeEEEecCHHHHHHHHHh
Q 038027 42 IGNLLELGGKPHKSLAKLAKIHGPIMSLRLG--------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 42 ~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~--------~~~~v~~~~p~~i~~i~~~ 91 (167)
+|+++. .-..+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 114 V~nLp~--~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~ 169 (193)
T 2voo_A 114 IKGFPT--DATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 169 (193)
T ss_dssp EECCCT--TCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHC
T ss_pred ecCCCC--cCCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHh
Confidence 455532 24567788899999998877543 3356677889988888754
No 113
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=27.71 E-value=82 Score=17.31 Aligned_cols=49 Identities=16% Similarity=0.115 Sum_probs=33.1
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC-----C----eeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG-----Q----VTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-----~----~~~v~~~~p~~i~~i~~~ 91 (167)
++||++.- --.+.+.++..+||+|..+.+. + .-.|-..+++.++..+..
T Consensus 23 fV~nLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 23 IVNYLPQN--MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEESCCTT--CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 45666432 3456778888999998877652 1 235667888888877753
No 114
>4b19_A PEPA1; toxin, toxin apoptotic peptide, apoptosis; NMR {Staphylococcus aureus}
Probab=27.67 E-value=13 Score=16.01 Aligned_cols=11 Identities=9% Similarity=0.027 Sum_probs=4.4
Q ss_pred HHHHHHHHHHh
Q 038027 15 LVWVMALSFIS 25 (167)
Q Consensus 15 ~~~~~~~~~~~ 25 (167)
.++.++.+++.
T Consensus 15 civalF~hWL~ 25 (30)
T 4b19_A 15 CAIAFFSYWLS 25 (30)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33344444443
No 115
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.63 E-value=74 Score=16.76 Aligned_cols=46 Identities=13% Similarity=0.221 Sum_probs=32.1
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC----CeeEEEecCHHHHHHH
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG----QVTTVVISSPSMAKAI 88 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~----~~~~v~~~~p~~i~~i 88 (167)
++|+++.- -..+.+.++..+||+|..+.+. |.-.|-..+++.++.+
T Consensus 9 ~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~ 58 (88)
T 1wf0_A 9 FVGRCTGD--MTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 58 (88)
T ss_dssp EEESCCSS--SCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHT
T ss_pred EEeCCCCC--CCHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHH
Confidence 35666432 3456678888999999888764 3456778888888754
No 116
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=27.20 E-value=85 Score=17.36 Aligned_cols=49 Identities=14% Similarity=0.097 Sum_probs=34.8
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC---------CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG---------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~v~~~~p~~i~~i~~~ 91 (167)
++|++.. .-..+.+.++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 30 ~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 87 (110)
T 1oo0_B 30 FVTSIHE--EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 87 (110)
T ss_dssp EEESCCT--TCCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 3555543 23456678889999999888763 3456778899888888753
No 117
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=27.12 E-value=90 Score=17.60 Aligned_cols=49 Identities=16% Similarity=0.245 Sum_probs=34.6
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC-----C----eeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG-----Q----VTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-----~----~~~v~~~~p~~i~~i~~~ 91 (167)
++|++.. .-..+.+.++..+||+|..+.+. + .-.|...+++.++..+..
T Consensus 10 fV~nL~~--~~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 10 TFARLND--NVRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp EEESCCT--TCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEECCCC--CCCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 4666643 23566788889999998887652 1 246778899988888754
No 118
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.04 E-value=84 Score=17.21 Aligned_cols=51 Identities=14% Similarity=0.184 Sum_probs=34.2
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeCC---------eeEEEecCHHHHHHHHHhcc
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQ---------VTTVVISSPSMAKAILKEHD 93 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~v~~~~p~~i~~i~~~~~ 93 (167)
+++++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++.++..+.
T Consensus 20 ~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~ 79 (105)
T 2dh8_A 20 FVGGLDWS--TTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRP 79 (105)
T ss_dssp CCBSCCTT--CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCS
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCC
Confidence 45666432 34567788889999988776522 24566788888888876533
No 119
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=27.01 E-value=84 Score=17.21 Aligned_cols=49 Identities=16% Similarity=0.155 Sum_probs=33.7
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC---------CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG---------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~v~~~~p~~i~~i~~~ 91 (167)
++|++.. .-..+.+.++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 27 ~V~nlp~--~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 27 FVTGVHE--EATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEECCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 3555543 23456678889999998887652 2345667888888888753
No 120
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.26 E-value=81 Score=16.77 Aligned_cols=49 Identities=14% Similarity=0.188 Sum_probs=34.6
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC-CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG-QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-~~~~v~~~~p~~i~~i~~~ 91 (167)
++|++..- -..+.+.++..+||+|..+.+. +.-.|-..+++.+...+..
T Consensus 14 ~V~nLp~~--~t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~~ 63 (92)
T 2dgt_A 14 HVGNISPT--CTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRG 63 (92)
T ss_dssp EEESCCSS--CCHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 45666432 3566788889999998888763 3455667888888877753
No 121
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=25.97 E-value=1.2e+02 Score=18.50 Aligned_cols=49 Identities=14% Similarity=0.097 Sum_probs=34.0
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC---------CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG---------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~v~~~~p~~i~~i~~~ 91 (167)
++|+++. .-..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 76 ~V~nLp~--~~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 133 (165)
T 1rk8_A 76 FVTSIHE--EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 133 (165)
T ss_dssp EEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHH
Confidence 4555543 24566788889999998877653 2346677888888887753
No 122
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=25.63 E-value=99 Score=17.56 Aligned_cols=39 Identities=10% Similarity=0.089 Sum_probs=28.9
Q ss_pred CchHHHHHHHHHhCCeeEEEeC---------CeeEEEecCHHHHHHHH
Q 038027 51 KPHKSLAKLAKIHGPIMSLRLG---------QVTTVVISSPSMAKAIL 89 (167)
Q Consensus 51 ~~~~~~~~~~~~yg~i~~~~~~---------~~~~v~~~~p~~i~~i~ 89 (167)
-..+.+.++..+||+|..+.+. |.-.|-..+.+.++..+
T Consensus 48 ~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~ 95 (124)
T 2jwn_A 48 STAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAV 95 (124)
T ss_dssp CCHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHH
Confidence 3466778889999998877652 23457788888888887
No 123
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.22 E-value=98 Score=17.37 Aligned_cols=55 Identities=18% Similarity=0.172 Sum_probs=36.5
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC---CeeEEEecCHHHHHHHHHh-cccccC
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG---QVTTVVISSPSMAKAILKE-HDSLFC 97 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---~~~~v~~~~p~~i~~i~~~-~~~~~~ 97 (167)
++|++.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+.. +...+.
T Consensus 14 ~V~nLp~--~~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~ 72 (111)
T 1whx_A 14 LAKNLPA--GTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFH 72 (111)
T ss_dssp EEESCCT--TCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSS
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEEC
Confidence 3555532 23566788889999999888762 3456777888888877753 333343
No 124
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.99 E-value=96 Score=17.19 Aligned_cols=49 Identities=10% Similarity=0.074 Sum_probs=36.1
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC--CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG--QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~--~~~~v~~~~p~~i~~i~~~ 91 (167)
++|++.. .--.+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 19 ~V~nLp~--~~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 19 VVSGLPP--SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEESCCS--SCCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 4666653 24566788889999998887763 5677778899888888764
No 125
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.44 E-value=80 Score=17.66 Aligned_cols=49 Identities=10% Similarity=0.029 Sum_probs=32.4
Q ss_pred cccccccCCCCchHHHH---HHHHHhCCeeEEEeC------------CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLA---KLAKIHGPIMSLRLG------------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~---~~~~~yg~i~~~~~~------------~~~~v~~~~p~~i~~i~~~ 91 (167)
++|+++.- -..+.+. ++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 19 ~V~nLp~~--~~~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~ 82 (111)
T 2cpi_A 19 FVVGLSQR--LADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQC 82 (111)
T ss_dssp EEEEECTT--TCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHH
T ss_pred EEECCCCC--CCHHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHH
Confidence 45666442 2334455 778899998887653 2445677888888888764
No 126
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.24 E-value=96 Score=16.96 Aligned_cols=49 Identities=16% Similarity=0.214 Sum_probs=34.8
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeCC----------eeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQ----------VTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~----------~~~v~~~~p~~i~~i~~~ 91 (167)
++|++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.+...+..
T Consensus 19 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 77 (107)
T 2cph_A 19 LVRNIPFQ--ANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNA 77 (107)
T ss_dssp EEESCCTT--CCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCc--CCHHHHHHHHHccCCeEEEEEecCCCCCCCcCceEEEEECCHHHHHHHHHH
Confidence 45666432 34566888889999998887632 346777888888888754
No 127
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.24 E-value=84 Score=16.30 Aligned_cols=48 Identities=27% Similarity=0.230 Sum_probs=32.7
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC---------CeeEEEecCHHHHHHHHH
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG---------QVTTVVISSPSMAKAILK 90 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~v~~~~p~~i~~i~~ 90 (167)
++|+++.- -..+.+.++..+||+|..+.+. |.-.|-..+++.++..+.
T Consensus 9 ~v~nlp~~--~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 9 YIRGLQPG--TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp EEESCCTT--CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 45666432 3455677788899998887652 235677888888888775
No 128
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.19 E-value=79 Score=15.94 Aligned_cols=41 Identities=10% Similarity=0.082 Sum_probs=27.2
Q ss_pred chHHHHHHHHHhCCeeEEEeC---------CeeEEEecCHHHHHHHHHhc
Q 038027 52 PHKSLAKLAKIHGPIMSLRLG---------QVTTVVISSPSMAKAILKEH 92 (167)
Q Consensus 52 ~~~~~~~~~~~yg~i~~~~~~---------~~~~v~~~~p~~i~~i~~~~ 92 (167)
..+.+.+...+||+|..+.+. |.-.+-..+++.+...+...
T Consensus 13 t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 62 (77)
T 1uaw_A 13 TQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 62 (77)
T ss_dssp CSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTT
T ss_pred CHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhC
Confidence 345677888899987766542 23355567888888777543
No 129
>2cq0_A Eukaryotic translation initiation factor 3 subunit 4; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.16 E-value=90 Score=17.01 Aligned_cols=49 Identities=18% Similarity=0.194 Sum_probs=33.5
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeCC---------eeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQ---------VTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~v~~~~p~~i~~i~~~ 91 (167)
++|++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++..+..
T Consensus 19 ~V~nlp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (103)
T 2cq0_A 19 RVTNLSED--TRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAG 76 (103)
T ss_dssp EEESCCTT--CCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhCCCeEEEEEeecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 45666432 34556778888999988876521 245678899988888764
No 130
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=23.90 E-value=93 Score=16.63 Aligned_cols=49 Identities=22% Similarity=0.253 Sum_probs=33.7
Q ss_pred cccccccCCCCchHHHH----HHHHHhCCeeEEEeC------CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLA----KLAKIHGPIMSLRLG------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~----~~~~~yg~i~~~~~~------~~~~v~~~~p~~i~~i~~~ 91 (167)
++|++..- -..+.+. +...+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 12 ~V~nLp~~--~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 12 YINNLNEK--IKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp EEESCCTT--SCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 46666442 2233333 888999999888764 4567778899888887753
No 131
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.76 E-value=1e+02 Score=17.14 Aligned_cols=48 Identities=13% Similarity=0.117 Sum_probs=32.9
Q ss_pred ccccccCCCCchHHHHHHHHHhCCeeEEEeC-------CeeEEEecCHHHHHHHHHh
Q 038027 42 IGNLLELGGKPHKSLAKLAKIHGPIMSLRLG-------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 42 ~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-------~~~~v~~~~p~~i~~i~~~ 91 (167)
+|++.. .-..+.+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 34 V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~~ 88 (109)
T 2err_A 34 VSNIPF--RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 88 (109)
T ss_dssp EESCCT--TCCHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHHH
T ss_pred EECCCC--cCCHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHHH
Confidence 455533 23456778888999998877663 3456777888888777753
No 132
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=23.69 E-value=1.1e+02 Score=17.42 Aligned_cols=49 Identities=18% Similarity=0.203 Sum_probs=35.6
Q ss_pred cccccccCCCCchHHHHHHHHHhC-CeeEEEeC-----CeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHG-PIMSLRLG-----QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg-~i~~~~~~-----~~~~v~~~~p~~i~~i~~~ 91 (167)
++||+.. .--.+.+.++..+|| +|..+.+. |.-.|-..+++.++..+..
T Consensus 32 ~VgnLp~--~~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 32 TMKNLPE--GCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp EEECSSC--CCCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEECCCC--CCCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 4677653 245677888999999 78777663 4567778889888887754
No 133
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=23.63 E-value=1.1e+02 Score=17.17 Aligned_cols=49 Identities=18% Similarity=0.165 Sum_probs=33.4
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeCC---------eeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQ---------VTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~---------~~~v~~~~p~~i~~i~~~ 91 (167)
++|++..- -..+.+.++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 29 ~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 86 (115)
T 2cpz_A 29 FIYHLPQE--FGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQS 86 (115)
T ss_dssp EEESCCSS--CCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCCcCccEEEEECCHHHHHHHHHH
Confidence 45666432 34567888899999987776521 245667888888888744
No 134
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.43 E-value=98 Score=16.40 Aligned_cols=50 Identities=16% Similarity=0.112 Sum_probs=34.3
Q ss_pred ccccccccCCCCchHHHHHHHHHhCCeeEEEeC---------CeeEEEecCHHHHHHHHHh
Q 038027 40 PVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG---------QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 40 p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~v~~~~p~~i~~i~~~ 91 (167)
=++++++.- -..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 18 l~v~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 18 LGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp EEEESCCSS--CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEECCCCC--CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 346666432 3456788888999998887652 1245667889888888754
No 135
>2xs2_A Deleted in azoospermia-like; RNA binding protein-RNA complex; 1.35A {Mus musculus} PDB: 2xs7_A 2xs5_A 2xsf_A
Probab=22.24 E-value=73 Score=17.35 Aligned_cols=48 Identities=8% Similarity=0.099 Sum_probs=31.3
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC--------CeeEEEecCHHHHHHHHH
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG--------QVTTVVISSPSMAKAILK 90 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~--------~~~~v~~~~p~~i~~i~~ 90 (167)
++|++.. .--.+.+.++..+||+|..+.+. |.-.|-..+++.++..+.
T Consensus 13 ~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~Ai~ 68 (102)
T 2xs2_A 13 FVGGIDV--RMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQKIVE 68 (102)
T ss_dssp EEECCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSCCCHHHHTT
T ss_pred EEeCCCC--CCCHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHh
Confidence 3555543 23456678888999998877652 234556667777777765
No 136
>2dit_A HIV TAT specific factor 1 variant; structural genomics, RRM_1 domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.28 E-value=1.2e+02 Score=16.96 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=28.1
Q ss_pred HHHHHHHHHhCCeeEEEeC-----CeeEEEecCHHHHHHHHHh
Q 038027 54 KSLAKLAKIHGPIMSLRLG-----QVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 54 ~~~~~~~~~yg~i~~~~~~-----~~~~v~~~~p~~i~~i~~~ 91 (167)
+.+.+...+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 41 ~~l~~~f~~~G~v~~v~i~~~~~~G~afV~f~~~~~A~~Ai~~ 83 (112)
T 2dit_A 41 EDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQT 83 (112)
T ss_dssp HHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHH
T ss_pred HHHHHHHHccCCEeEEEEecCCCCEEEEEEECCHHHHHHHHHH
Confidence 5677788899998887652 4556777888888877754
No 137
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=21.25 E-value=1.2e+02 Score=16.92 Aligned_cols=48 Identities=13% Similarity=0.208 Sum_probs=34.4
Q ss_pred ccccccCCCCchHHHHHHHHHhCCeeEEEe-CCeeEEEecCHHHHHHHHHh
Q 038027 42 IGNLLELGGKPHKSLAKLAKIHGPIMSLRL-GQVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 42 ~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~-~~~~~v~~~~p~~i~~i~~~ 91 (167)
+|++.. .-..+.+.++..+||+|..+.+ -|.-.|-..+++.+...+..
T Consensus 36 V~nLp~--~~t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~ 84 (108)
T 2jvo_A 36 VRPFPL--DVQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEE 84 (108)
T ss_dssp ECSSCT--TCCHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHH
T ss_pred EECCCC--CCCHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 555533 2345667888899999887765 56667778899988887753
No 138
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.01 E-value=1.1e+02 Score=16.56 Aligned_cols=48 Identities=23% Similarity=0.167 Sum_probs=34.0
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC-------CeeEEEecCHHHHHHHHH
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG-------QVTTVVISSPSMAKAILK 90 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~-------~~~~v~~~~p~~i~~i~~ 90 (167)
++|++.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.+...+.
T Consensus 19 ~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cqi_A 19 YVGNLSR--DVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 73 (103)
T ss_dssp EEESCCT--TCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHH
T ss_pred EEeCCCc--cCCHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHH
Confidence 4566643 23556778888999998887653 345677888888888775
No 139
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=20.85 E-value=1.6e+02 Score=18.10 Aligned_cols=50 Identities=16% Similarity=0.110 Sum_probs=35.2
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEeC---------CeeEEEecCHHHHHHHHHhc
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG---------QVTTVVISSPSMAKAILKEH 92 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---------~~~~v~~~~p~~i~~i~~~~ 92 (167)
++|+++.- --.+.+.++..+||+|..+.+. |.-.|-..+++.+...+..+
T Consensus 17 ~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~ 75 (196)
T 1l3k_A 17 FIGGLSFE--TTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 75 (196)
T ss_dssp EEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTC
T ss_pred EEeCCCCC--CCHHHHHHHHHhCCCEEEEEEEEcCCCCCccceEEEEeCCHHHHHHHHhcC
Confidence 45666442 3456778899999998776542 13467788999999888653
No 140
>2zdj_A Hypothetical protein TTMA177; alpha and beta proteins (A+B), cystatin-like, NPPSFA; 2.20A {Thermus thermophilus phage tma}
Probab=20.68 E-value=59 Score=16.69 Aligned_cols=18 Identities=28% Similarity=0.233 Sum_probs=14.9
Q ss_pred eeEEEecCHHHHHHHHHh
Q 038027 74 VTTVVISSPSMAKAILKE 91 (167)
Q Consensus 74 ~~~v~~~~p~~i~~i~~~ 91 (167)
...+++.||..++.|+..
T Consensus 12 D~Y~l~qdsq~VK~iLey 29 (69)
T 2zdj_A 12 DDYTLIQDSQEVKAILEY 29 (69)
T ss_dssp TTCEEECCHHHHHHHHHH
T ss_pred CCeEEEeCHHHHHHHHHH
Confidence 356788999999999965
No 141
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=20.66 E-value=1.4e+02 Score=17.68 Aligned_cols=47 Identities=13% Similarity=0.114 Sum_probs=32.7
Q ss_pred ccccccCCCCchHHHHHHHHHhCCeeEEEeCC-----eeEEEecCHHHHHHHHH
Q 038027 42 IGNLLELGGKPHKSLAKLAKIHGPIMSLRLGQ-----VTTVVISSPSMAKAILK 90 (167)
Q Consensus 42 ~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~~-----~~~v~~~~p~~i~~i~~ 90 (167)
+||+.. .--.+.+.++..+||+|.++.+.. .-.|-..+++.++..+.
T Consensus 33 V~NL~~--~vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~ 84 (130)
T 3zzy_A 33 VENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 84 (130)
T ss_dssp EESCCS--CCCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHH
T ss_pred ECCCCC--CCCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHH
Confidence 677643 234556888999999988876643 25677788877776664
No 142
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=20.53 E-value=1.2e+02 Score=16.49 Aligned_cols=50 Identities=18% Similarity=0.311 Sum_probs=35.1
Q ss_pred cccccccCCCCchHHHHHHHHHhCCeeEEEe-CCeeEEEecCHHHHHHHHHh
Q 038027 41 VIGNLLELGGKPHKSLAKLAKIHGPIMSLRL-GQVTTVVISSPSMAKAILKE 91 (167)
Q Consensus 41 ~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~-~~~~~v~~~~p~~i~~i~~~ 91 (167)
++|++..- .-..+.+.++..+||+|..+.+ -|.-.|-..+++.+...+..
T Consensus 26 ~V~nLp~~-~~t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~~ 76 (97)
T 2xnq_A 26 FIGNLPLK-NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEX 76 (97)
T ss_dssp EEESCCSS-CCCHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCcc-cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 35665420 2345677888999999988876 45566778889888888753
No 143
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.50 E-value=1.3e+02 Score=17.06 Aligned_cols=52 Identities=12% Similarity=0.079 Sum_probs=36.4
Q ss_pred CCCccccccccCCCCchHHHHHHHHHhCCeeEEEeC---CeeEEEecCHHHHHHHHH
Q 038027 37 RPYPVIGNLLELGGKPHKSLAKLAKIHGPIMSLRLG---QVTTVVISSPSMAKAILK 90 (167)
Q Consensus 37 ~~~p~~g~~~~~~~~~~~~~~~~~~~yg~i~~~~~~---~~~~v~~~~p~~i~~i~~ 90 (167)
...=++|++..- --.+.+.++..+||.|..+.+. |.-.|-..+++.+...+.
T Consensus 16 ~~~LfV~nLp~~--vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 16 SRVIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp CCEEEECSCCTT--SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 333456777542 3456678899999999888763 456777888888877775
Done!