Your job contains 1 sequence.
>038028
MADFQTSTHRANWIFTPQELIEKYKASNRRAIQTLEKYGTTQMEVDVDGSFSYPEPQNNA
KDNSEKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVM
EHHPKNIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQALEFDLIVYPPY
RPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQVLSVIQLAL
AALRNSNKVQRVVNYESYLSSILSRQNSGHIISDLTENLDTIDSWVMKYKFPSEKDMKHI
NRKLKSCWGHGSHDVSKKREKKSKHKSKSSHGMQNGP
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038028
(337 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2143671 - symbol:CYCH;1 "cyclin H;1" species:3... 1050 4.0e-106 1
UNIPROTKB|E1C948 - symbol:CCNH "Uncharacterized protein" ... 367 1.0e-36 2
RGD|69419 - symbol:Ccnh "cyclin H" species:10116 "Rattus ... 366 1.7e-36 2
UNIPROTKB|Q4R7U4 - symbol:CCNH "Cyclin-H" species:9541 "M... 363 2.7e-36 2
UNIPROTKB|E2R5P2 - symbol:CCNH "Uncharacterized protein" ... 363 3.5e-36 2
UNIPROTKB|P51946 - symbol:CCNH "Cyclin-H" species:9606 "H... 362 3.5e-36 2
MGI|MGI:1913921 - symbol:Ccnh "cyclin H" species:10090 "M... 361 4.4e-36 2
UNIPROTKB|Q3ZBL9 - symbol:CCNH "Cyclin-H" species:9913 "B... 360 7.2e-36 2
UNIPROTKB|C9K506 - symbol:CCNH "Uncharacterized protein" ... 360 7.2e-36 2
UNIPROTKB|F1MG12 - symbol:CCNH "Cyclin-H" species:9913 "B... 359 9.2e-36 2
UNIPROTKB|E2QYZ5 - symbol:CCNH "Uncharacterized protein" ... 325 3.4e-32 2
UNIPROTKB|E1BCT0 - symbol:E1BCT0 "Uncharacterized protein... 314 2.3e-31 2
ZFIN|ZDB-GENE-050320-13 - symbol:ccnh "cyclin H" species:... 338 1.1e-30 1
UNIPROTKB|D6RG18 - symbol:CCNH "Cyclin-H" species:9606 "H... 323 4.4e-29 1
UNIPROTKB|D6RHI7 - symbol:CCNH "Cyclin-H" species:9606 "H... 323 4.4e-29 1
DICTYBASE|DDB_G0268668 - symbol:cycH "putative H-type cyc... 287 2.9e-25 1
CGD|CAL0002756 - symbol:orf19.4542 species:5476 "Candida ... 282 9.7e-25 1
FB|FBgn0022936 - symbol:CycH "Cyclin H" species:7227 "Dro... 276 4.2e-24 1
POMBASE|SPBP16F5.02 - symbol:mcs2 "TFIIH complex cyclin M... 266 4.8e-23 1
SGD|S000006229 - symbol:CCL1 "Cyclin associated with prot... 265 6.1e-23 1
ASPGD|ASPL0000048807 - symbol:AN2211 species:162425 "Emer... 194 2.0e-15 2
WB|WBGene00021714 - symbol:cyh-1 species:6239 "Caenorhabd... 201 3.2e-14 1
UNIPROTKB|F1NTI7 - symbol:CCNC "Cyclin-C" species:9031 "G... 115 3.8e-11 3
UNIPROTKB|G5E954 - symbol:CCNC "Cyclin-C" species:9606 "H... 115 5.6e-11 3
TAIR|locus:2152556 - symbol:AT5G48640 species:3702 "Arabi... 163 3.8e-10 1
UNIPROTKB|F1RXY0 - symbol:CCNC "Uncharacterized protein" ... 153 1.9e-09 2
UNIPROTKB|E5RFK5 - symbol:CCNC "Cyclin-C" species:9606 "H... 115 2.0e-09 3
UNIPROTKB|P55168 - symbol:CCNC "Cyclin-C" species:9031 "G... 115 2.1e-09 3
UNIPROTKB|P24863 - symbol:CCNC "Cyclin-C" species:9606 "H... 115 2.1e-09 3
DICTYBASE|DDB_G0274139 - symbol:cycC "putative C-type cyc... 157 2.3e-09 1
UNIPROTKB|Q3ZCK5 - symbol:CCNC "Cyclin-C" species:9913 "B... 115 2.6e-09 3
UNIPROTKB|J3KP90 - symbol:CCNC "Cyclin-C" species:9606 "H... 115 3.2e-09 3
MGI|MGI:1858199 - symbol:Ccnc "cyclin C" species:10090 "M... 115 5.2e-09 3
UNIPROTKB|E5RIH8 - symbol:CCNC "Cyclin-C" species:9606 "H... 115 7.6e-09 2
UNIPROTKB|Q5JV82 - symbol:CCNC "Cyclin-C" species:9606 "H... 115 7.6e-09 2
UNIPROTKB|A4RD79 - symbol:SSN8 "RNA polymerase II holoenz... 135 1.2e-08 2
UNIPROTKB|F1LNZ0 - symbol:Ccnc "Cyclin-C" species:10116 "... 115 1.3e-08 3
UNIPROTKB|Q91031 - symbol:CCNC "Cyclin C" species:9031 "G... 115 1.5e-08 2
UNIPROTKB|Q90695 - symbol:CCNC "Cyclin C" species:9031 "G... 112 1.6e-08 2
UNIPROTKB|F1PGM0 - symbol:CCNC "Uncharacterized protein" ... 115 1.8e-08 2
ZFIN|ZDB-GENE-030131-7369 - symbol:ccnc "cyclin C" specie... 114 2.4e-08 2
RGD|70905 - symbol:Ccnc "cyclin C" species:10116 "Rattus ... 116 3.2e-08 2
UNIPROTKB|P39947 - symbol:Ccnc "Cyclin-C" species:10116 "... 116 3.2e-08 2
ASPGD|ASPL0000048419 - symbol:AN2172 species:162425 "Emer... 124 9.5e-07 2
SGD|S000004970 - symbol:SSN8 "Cyclin-like component of th... 138 9.5e-07 1
CGD|CAL0004675 - symbol:SSN8 species:5476 "Candida albica... 137 2.0e-06 2
UNIPROTKB|Q5A4H9 - symbol:SSN8 "RNA polymerase II holoenz... 137 2.0e-06 2
UNIPROTKB|J9NXY6 - symbol:CCNC "Uncharacterized protein" ... 115 2.4e-06 1
WB|WBGene00000506 - symbol:cic-1 species:6239 "Caenorhabd... 127 2.8e-06 2
UNIPROTKB|H0YBQ5 - symbol:CCNC "Cyclin-C" species:9606 "H... 92 3.9e-06 2
UNIPROTKB|Q788V6 - symbol:CCNC "Cyclin-C" species:9031 "G... 112 5.1e-06 1
UNIPROTKB|Q29AI1 - symbol:CycC "Cyclin-C" species:46245 "... 123 7.5e-06 2
FB|FBgn0004597 - symbol:CycC "Cyclin C" species:7227 "Dro... 124 2.4e-05 1
UNIPROTKB|E5RI39 - symbol:CCNC "Cyclin-C" species:9606 "H... 115 8.6e-05 1
TAIR|locus:2008698 - symbol:CYCT1;1 "cyclin T1;1" species... 116 0.00016 1
TAIR|locus:2122975 - symbol:CYCT1;4 species:3702 "Arabido... 83 0.00071 2
>TAIR|locus:2143671 [details] [associations]
symbol:CYCH;1 "cyclin H;1" species:3702 "Arabidopsis
thaliana" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005675
"holo TFIIH complex" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISS] [GO:0004672 "protein
kinase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0010440
"stomatal lineage progression" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0045736 "negative regulation
of cyclin-dependent protein serine/threonine kinase activity"
evidence=RCA] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 GO:GO:0005634 GO:GO:0005737
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000079 GO:GO:0051301
GO:GO:0006355 GO:GO:0007049 GO:GO:0004672 EMBL:AC007478
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PROSITE:PS00292
eggNOG:COG5333 PANTHER:PTHR10026 EMBL:AB051072 EMBL:AK118707
IPI:IPI00548103 RefSeq:NP_198114.2 UniGene:At.27359 HSSP:P51946
ProteinModelPortal:Q8W5S1 SMR:Q8W5S1 IntAct:Q8W5S1 STRING:Q8W5S1
PaxDb:Q8W5S1 PRIDE:Q8W5S1 EnsemblPlants:AT5G27620.1 GeneID:832824
KEGG:ath:AT5G27620 GeneFarm:3392 TAIR:At5g27620
HOGENOM:HOG000030045 InParanoid:Q8W5S1 KO:K06634 OMA:HKIQATA
PhylomeDB:Q8W5S1 ProtClustDB:CLSN2690204 Genevestigator:Q8W5S1
GO:GO:0005675 PANTHER:PTHR10026:SF8 Uniprot:Q8W5S1
Length = 336
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 204/315 (64%), Positives = 251/315 (79%)
Query: 1 MADFQTSTHRANWIFTPQELIEKYKASNRRAIQTLEKYGTTQMEVDVDGSFSYPEPQNNA 60
MADFQTST RA WIFTPQ+L E+YKA+N+RA+Q LEK GTTQ+EVD GS +YP+ + +
Sbjct: 1 MADFQTSTQRAKWIFTPQKLAERYKAANQRAVQMLEKCGTTQVEVDASGSLTYPKDKVGS 60
Query: 61 KDNSEKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVM 120
D ++K + KPL+ +EE+ MR FYE K++EVCSAF FP+KIQATAL YFKRFYLQWSVM
Sbjct: 61 GDQADK--KLKPLSADEERFMRAFYEAKVQEVCSAFAFPHKIQATALQYFKRFYLQWSVM 118
Query: 121 EHHPKNIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQALEFDLIVYPPY 180
+HHPK IMLTCVYAACKIEENHVSAEE+GKGI+QDH++IL YEM V Q+LEFDLIVY PY
Sbjct: 119 QHHPKEIMLTCVYAACKIEENHVSAEEIGKGINQDHRIILKYEMAVLQSLEFDLIVYAPY 178
Query: 181 RPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQVLSVIQLAL 240
R +EGF+N+ME+F Q ++ E+Q L+ L + A E DK+MLTDAPLLFPPGQ LAL
Sbjct: 179 RAIEGFVNNMEEFLQARDDEIQKLESLLKGATAEADKVMLTDAPLLFPPGQ------LAL 232
Query: 241 AALRNSNKVQRVVNYESYLSSILSRQNSGHIISDLTENLDTIDSWVMKYKFPSEKDMKHI 300
A+LR +N V V++++ YL +I+S+ NS H S+LT+ LD I+ V YK PSEKDMKHI
Sbjct: 233 ASLRIANGVLGVIDFDRYLENIVSQPNSEHTTSELTKLLDNIEYLVKNYKCPSEKDMKHI 292
Query: 301 NRKLKSCWGHGS-HD 314
NRKLKSC GH S HD
Sbjct: 293 NRKLKSCLGHSSSHD 307
>UNIPROTKB|E1C948 [details] [associations]
symbol:CCNH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0008353 "RNA polymerase II carboxy-terminal domain kinase
activity" evidence=IEA] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0045944 GO:GO:0006366 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0008353 PANTHER:PTHR10026 KO:K06634
GO:GO:0005675 PANTHER:PTHR10026:SF8 GeneTree:ENSGT00390000008634
TIGRFAMs:TIGR00569 CTD:902 OMA:EILATCV GO:GO:0019907 GO:GO:0008094
EMBL:AADN02047537 IPI:IPI00594378 RefSeq:XP_424908.2
UniGene:Gga.29608 Ensembl:ENSGALT00000025216 GeneID:427328
KEGG:gga:427328 NextBio:20828605 Uniprot:E1C948
Length = 322
Score = 367 (134.2 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 88/245 (35%), Positives = 143/245 (58%)
Query: 73 LNIEEEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNIMLT 130
L EE ++ +YE +L + C+ F P + TA +YFKRFYL SVME+HP+ IMLT
Sbjct: 48 LEAHEELAICKYYEKRLLDFCAVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLT 107
Query: 131 CVYAACKIEENHVS-AEELGK----GISQDH--QMILNYEMIVYQALEFDLIVYPPYRPL 183
C + ACK++E +VS A+ +G + Q+ + IL YE+++ Q L F LIV+ PYRP
Sbjct: 108 CAFLACKVDEFNVSSAQFVGNLRESPVGQEKALEQILEYELLLIQQLNFHLIVHNPYRPF 167
Query: 184 EGFINDMED-FCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQVLSVIQLALAA 242
EG + D++ + ++N E+ L +TA + ++ LTDA LLF P Q+ ALAA
Sbjct: 168 EGILIDLKTRYPLLENPEV-----LRKTADDFLSRVALTDAYLLFTPSQI------ALAA 216
Query: 243 LRNSNKVQRVVNYESYLSSILSRQNSGHIISDLTENLDTIDSWVMKYKFPSEKDMKHINR 302
+ +S + +N ESYLS + + ++ L E + ++ + + KY+ P +++ + +
Sbjct: 217 ILSSAS-RAGINMESYLSECFMLKENRTFLAKLLEGMKSMKNLIKKYELPRPEEVASLKQ 275
Query: 303 KLKSC 307
KL+ C
Sbjct: 276 KLEKC 280
Score = 44 (20.5 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 4 FQTSTHRANWIFTPQELIEKYKA-SNRR 30
F +ST R W F ++ + + +A +NR+
Sbjct: 2 FYSSTQRRYWTFRSEDELARSRADANRK 29
>RGD|69419 [details] [associations]
symbol:Ccnh "cyclin H" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein serine/threonine
kinase activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO] [GO:0005675
"holo TFIIH complex" evidence=ISO;ISS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0006468
"protein phosphorylation" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008353 "RNA polymerase II carboxy-terminal
domain kinase activity" evidence=ISO;ISS] [GO:0016301 "kinase
activity" evidence=ISO] [GO:0016310 "phosphorylation" evidence=ISO]
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0019907 "cyclin-dependent protein kinase
activating kinase holoenzyme complex" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0070985 "TFIIK complex"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 RGD:69419 GO:GO:0000079
GO:GO:0045944 GO:GO:0007049 GO:GO:0006366 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0008353 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
GeneTree:ENSGT00390000008634 TIGRFAMs:TIGR00569 CTD:902
HOGENOM:HOG000232149 HOVERGEN:HBG050840 OrthoDB:EOG47SSF4
OMA:EILATCV GO:GO:0019907 GO:GO:0008094 EMBL:AF154914 EMBL:AJ276495
EMBL:BC059109 IPI:IPI00326558 RefSeq:NP_443213.2 UniGene:Rn.23255
ProteinModelPortal:Q9R1A0 SMR:Q9R1A0 STRING:Q9R1A0 PRIDE:Q9R1A0
Ensembl:ENSRNOT00000049423 GeneID:84389 KEGG:rno:84389
UCSC:RGD:69419 InParanoid:Q9R1A0 NextBio:616747
Genevestigator:Q9R1A0 GermOnline:ENSRNOG00000031656 Uniprot:Q9R1A0
Length = 323
Score = 366 (133.9 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 94/253 (37%), Positives = 148/253 (58%)
Query: 72 PLNIE--EEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNI 127
PL +E EE ++ +YE +L E CS F P + TA +YFKRFYL SVME+HP+ I
Sbjct: 45 PLFLEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRII 104
Query: 128 MLTCVYAACKIEENHVSAEE-LGK----GISQDH--QMILNYEMIVYQALEFDLIVYPPY 180
MLTC + ACK++E +VS+ + +G + Q+ + IL YE+++ Q L F LIV+ PY
Sbjct: 105 MLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPY 164
Query: 181 RPLEGFINDMED-FCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQVLSVIQLA 239
RP EGF+ D++ + ++N E+ L +TA + +I LTDA LL+ P Q+ A
Sbjct: 165 RPFEGFLIDIKTRYPMLENPEI-----LRKTADDFLSRIALTDAYLLYTPSQI------A 213
Query: 240 LAALRNSNKVQRVVNYESYLSSILSRQNSGHIISDLTENLDTIDSWVMKYKFPSEKDMKH 299
L A+ +S + + ESYLS L + + +S L + + ++ + V KY+ P +++
Sbjct: 214 LTAILSSAS-RAGITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAI 272
Query: 300 INRKLKSCWGHGS 312
+ +KL+ C H S
Sbjct: 273 LKQKLERC--HSS 283
Score = 43 (20.2 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 4 FQTSTHRANWIFTPQELIEKYKA-SNRR 30
+ S+ + +W F +E + + +A +NR+
Sbjct: 2 YHNSSQKRHWTFASEEQLARLRADANRK 29
>UNIPROTKB|Q4R7U4 [details] [associations]
symbol:CCNH "Cyclin-H" species:9541 "Macaca fascicularis"
[GO:0005675 "holo TFIIH complex" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=ISS] [GO:0004672
"protein kinase activity" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0008353 "RNA polymerase II
carboxy-terminal domain kinase activity" evidence=ISS]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355 GO:GO:0006468
GO:GO:0007049 GO:GO:0006366 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 PANTHER:PTHR10026 HSSP:P51946 GO:GO:0005675
PANTHER:PTHR10026:SF8 TIGRFAMs:TIGR00569 HOVERGEN:HBG050840
EMBL:AB168718 ProteinModelPortal:Q4R7U4 SMR:Q4R7U4 Uniprot:Q4R7U4
Length = 323
Score = 363 (132.8 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 93/249 (37%), Positives = 148/249 (59%)
Query: 70 PKPLNIEEEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNI 127
P L EE ++ +YE +L E CS F P + TA +YFKRFYL SVME+HP+ I
Sbjct: 45 PVFLEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRII 104
Query: 128 MLTCVYAACKIEENHVSAEE-LGK----GISQDH--QMILNYEMIVYQALEFDLIVYPPY 180
MLTC + ACK++E +VS+ + +G + Q+ + IL YE+++ Q L F LIV+ PY
Sbjct: 105 MLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPY 164
Query: 181 RPLEGFINDMED-FCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQVLSVIQLA 239
RP EGF+ D++ + ++N E+ L +TA +++I LTDA LL+ P Q+ A
Sbjct: 165 RPFEGFLIDLKTRYPILENPEI-----LRKTADDFLNRIALTDAYLLYTPSQI------A 213
Query: 240 LAALRNSNKVQRVVNYESYLS-SILSRQNSGHIISDLTENLDTIDSWVMKYKFPSEKDMK 298
L A+ +S + + ESYLS S++ R+N +S L + + ++ + V KY+ P +++
Sbjct: 214 LTAILSSAS-RAGITMESYLSESLMLRENRT-CLSQLLDIMKSMRNLVKKYEPPRSEEVA 271
Query: 299 HINRKLKSC 307
+ +KL+ C
Sbjct: 272 VLKQKLERC 280
Score = 44 (20.5 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 7/28 (25%), Positives = 18/28 (64%)
Query: 4 FQTSTHRANWIFTPQELIEKYKA-SNRR 30
+ S+ + +W F+ +E + + +A +NR+
Sbjct: 2 YHNSSQKRHWTFSSEEQLARLRADANRK 29
>UNIPROTKB|E2R5P2 [details] [associations]
symbol:CCNH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070985 "TFIIK complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
GeneTree:ENSGT00390000008634 TIGRFAMs:TIGR00569 CTD:902 OMA:EILATCV
EMBL:AAEX03002082 RefSeq:XP_536300.3 Ensembl:ENSCAFT00000036048
GeneID:479156 KEGG:cfa:479156 Uniprot:E2R5P2
Length = 323
Score = 363 (132.8 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 91/248 (36%), Positives = 144/248 (58%)
Query: 70 PKPLNIEEEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNI 127
P L EE + +YE +L E CS F P + TA +YFKRFYL SVME+HP+ I
Sbjct: 45 PVFLEPHEEMILCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRII 104
Query: 128 MLTCVYAACKIEENHVSAEE-LGK----GISQDH--QMILNYEMIVYQALEFDLIVYPPY 180
MLTC + ACK++E +VS+ + +G + Q+ + IL YE+++ Q L F LIV+ PY
Sbjct: 105 MLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPY 164
Query: 181 RPLEGFINDMED-FCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQVLSVIQLA 239
RP EGF+ D++ + ++N E+ L +TA +++I LTDA LL+ P Q+ A
Sbjct: 165 RPFEGFLIDLKTRYPMMENPEM-----LRKTADDFLNRIALTDAYLLYTPSQI------A 213
Query: 240 LAALRNSNKVQRVVNYESYLSSILSRQNSGHIISDLTENLDTIDSWVMKYKFPSEKDMKH 299
L A+ +S + + ESYLS L + + +S L + + ++ + V KY+ P +++
Sbjct: 214 LTAILSSAS-RAGITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAA 272
Query: 300 INRKLKSC 307
+ +KL+ C
Sbjct: 273 LKQKLERC 280
Score = 43 (20.2 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 4 FQTSTHRANWIFTPQELIEKYKA-SNRR 30
+ S+ + +W F +E + + +A +NR+
Sbjct: 2 YHNSSQKRHWTFASEEQLARLRADANRK 29
>UNIPROTKB|P51946 [details] [associations]
symbol:CCNH "Cyclin-H" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IDA;TAS]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0019907
"cyclin-dependent protein kinase activating kinase holoenzyme
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005675 "holo TFIIH complex" evidence=IDA] [GO:0008353 "RNA
polymerase II carboxy-terminal domain kinase activity"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=TAS] [GO:0000080 "G1
phase of mitotic cell cycle" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0000718 "nucleotide-excision
repair, DNA damage removal" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS] [GO:0006360
"transcription from RNA polymerase I promoter" evidence=TAS]
[GO:0006361 "transcription initiation from RNA polymerase I
promoter" evidence=TAS] [GO:0006362 "transcription elongation from
RNA polymerase I promoter" evidence=TAS] [GO:0006363 "termination
of RNA polymerase I transcription" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=TAS] [GO:0006370
"7-methylguanosine mRNA capping" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0050434 "positive regulation of viral
transcription" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006468 "protein phosphorylation" evidence=IDA]
Reactome:REACT_216 Reactome:REACT_71 InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
Reactome:REACT_116125 Reactome:REACT_115566 GO:GO:0000086
GO:GO:0000079 GO:GO:0016032 GO:GO:0000082 Reactome:REACT_1675
GO:GO:0045944 GO:GO:0006468 GO:GO:0016301 GO:GO:0006368
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0000084
GO:GO:0006367 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0000080 Reactome:REACT_1788 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
TIGRFAMs:TIGR00569 CTD:902 HOGENOM:HOG000232149 HOVERGEN:HBG050840
OrthoDB:EOG47SSF4 EMBL:U11791 EMBL:U12685 EMBL:CR407658
EMBL:AF477979 EMBL:BC005280 EMBL:BC016705 EMBL:BC016823
EMBL:BC022351 IPI:IPI00021305 PIR:I38731 RefSeq:NP_001230.1
UniGene:Hs.292524 PDB:1JKW PDB:1KXU PDBsum:1JKW PDBsum:1KXU
DisProt:DP00307 ProteinModelPortal:P51946 SMR:P51946 DIP:DIP-5996N
IntAct:P51946 MINT:MINT-1434271 STRING:P51946 PhosphoSite:P51946
DMDM:1706232 PaxDb:P51946 PeptideAtlas:P51946 PRIDE:P51946
DNASU:902 Ensembl:ENST00000256897 GeneID:902 KEGG:hsa:902
UCSC:uc003kja.3 GeneCards:GC05M086690 HGNC:HGNC:1594 HPA:CAB019416
MIM:601953 neXtProt:NX_P51946 PharmGKB:PA26159 InParanoid:P51946
OMA:EILATCV PhylomeDB:P51946 BindingDB:P51946 ChEMBL:CHEMBL2165
ChiTaRS:CCNH EvolutionaryTrace:P51946 GenomeRNAi:902 NextBio:3728
ArrayExpress:P51946 Bgee:P51946 CleanEx:HS_CCNH
Genevestigator:P51946 GermOnline:ENSG00000134480 GO:GO:0019907
GO:GO:0006370 GO:GO:0000718 GO:GO:0050434 GO:GO:0006363
GO:GO:0006362 GO:GO:0006361 GO:GO:0006283 Uniprot:P51946
Length = 323
Score = 362 (132.5 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 91/248 (36%), Positives = 145/248 (58%)
Query: 70 PKPLNIEEEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNI 127
P L EE ++ +YE +L E CS F P + TA +YFKRFYL SVME+HP+ I
Sbjct: 45 PVFLEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRII 104
Query: 128 MLTCVYAACKIEENHVSAEE-LGK----GISQDH--QMILNYEMIVYQALEFDLIVYPPY 180
MLTC + ACK++E +VS+ + +G + Q+ + IL YE+++ Q L F LIV+ PY
Sbjct: 105 MLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPY 164
Query: 181 RPLEGFINDMED-FCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQVLSVIQLA 239
RP EGF+ D++ + ++N E+ L +TA +++I LTDA LL+ P Q+ A
Sbjct: 165 RPFEGFLIDLKTRYPILENPEI-----LRKTADDFLNRIALTDAYLLYTPSQI------A 213
Query: 240 LAALRNSNKVQRVVNYESYLSSILSRQNSGHIISDLTENLDTIDSWVMKYKFPSEKDMKH 299
L A+ +S + + ESYLS L + + +S L + + ++ + V KY+ P +++
Sbjct: 214 LTAILSSAS-RAGITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAV 272
Query: 300 INRKLKSC 307
+ +KL+ C
Sbjct: 273 LKQKLERC 280
Score = 44 (20.5 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 7/28 (25%), Positives = 18/28 (64%)
Query: 4 FQTSTHRANWIFTPQELIEKYKA-SNRR 30
+ S+ + +W F+ +E + + +A +NR+
Sbjct: 2 YHNSSQKRHWTFSSEEQLARLRADANRK 29
>MGI|MGI:1913921 [details] [associations]
symbol:Ccnh "cyclin H" species:10090 "Mus musculus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005675 "holo
TFIIH complex" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006468 "protein phosphorylation" evidence=ISO;ISS] [GO:0007049
"cell cycle" evidence=ISS] [GO:0016301 "kinase activity"
evidence=IDA] [GO:0016310 "phosphorylation" evidence=IDA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=ISO] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 MGI:MGI:1913921 GO:GO:0000079 GO:GO:0045944
GO:GO:0006366 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0004693 GO:GO:0008353 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
GeneTree:ENSGT00390000008634 TIGRFAMs:TIGR00569 CTD:902
HOVERGEN:HBG050840 OrthoDB:EOG47SSF4 GO:GO:0019907 EMBL:AF287135
EMBL:AK007910 EMBL:AK078059 EMBL:BC038861 EMBL:X82441
IPI:IPI00752728 PIR:S48862 RefSeq:NP_075732.1 UniGene:Mm.18474
ProteinModelPortal:Q61458 SMR:Q61458 STRING:Q61458
PhosphoSite:Q61458 PaxDb:Q61458 PRIDE:Q61458
Ensembl:ENSMUST00000022030 GeneID:66671 KEGG:mmu:66671
UCSC:uc007riu.1 InParanoid:Q61458 NextBio:322333 Bgee:Q61458
CleanEx:MM_CCNH Genevestigator:Q61458 GermOnline:ENSMUSG00000021548
GO:GO:0008094 Uniprot:Q61458
Length = 323
Score = 361 (132.1 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 93/253 (36%), Positives = 145/253 (57%)
Query: 70 PKPLNIEEEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNI 127
P L EE ++ +YE +L E CS F P + TA +YFKRFYL SVME+HP+ I
Sbjct: 45 PVFLEPHEELTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRII 104
Query: 128 MLTCVYAACKIEENHVSAEE-LGK----GISQDH--QMILNYEMIVYQALEFDLIVYPPY 180
MLTC + ACK++E +VS+ + +G + Q+ + IL YE+++ Q L F LIV+ PY
Sbjct: 105 MLTCAFLACKVDEFNVSSPQFVGNLRESPLGQERALEQILEYELLLIQQLNFHLIVHNPY 164
Query: 181 RPLEGFINDMED-FCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQVLSVIQLA 239
RP EGF+ D++ + ++N E+ L +TA + +I LTDA LL+ P Q+ A
Sbjct: 165 RPFEGFLIDIKTRYPMLENPEI-----LRKTADDFLSRIALTDAYLLYTPSQI------A 213
Query: 240 LAALRNSNKVQRVVNYESYLSSILSRQNSGHIISDLTENLDTIDSWVMKYKFPSEKDMKH 299
L A+ +S + + ESYLS L + + +S L + + ++ + V KY+ P ++
Sbjct: 214 LTAILSSAS-RAGITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYEPPRSDEVAV 272
Query: 300 INRKLKSCWGHGS 312
+ +KL+ C H S
Sbjct: 273 LKQKLERC--HSS 283
Score = 44 (20.5 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 7/28 (25%), Positives = 18/28 (64%)
Query: 4 FQTSTHRANWIFTPQELIEKYKA-SNRR 30
+ +S+ + +W F +E + + +A +NR+
Sbjct: 2 YHSSSQKRHWTFASEEQLARLRADANRK 29
>UNIPROTKB|Q3ZBL9 [details] [associations]
symbol:CCNH "Cyclin-H" species:9913 "Bos taurus"
[GO:0006468 "protein phosphorylation" evidence=ISS] [GO:0005675
"holo TFIIH complex" evidence=ISS] [GO:0008353 "RNA polymerase II
carboxy-terminal domain kinase activity" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004672 "protein kinase activity" evidence=ISS] [GO:0007049
"cell cycle" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0070985 "TFIIK
complex" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 GO:GO:0006468 GO:GO:0007049
GO:GO:0006366 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026 KO:K06634
GO:GO:0005675 PANTHER:PTHR10026:SF8 TIGRFAMs:TIGR00569
EMBL:BC103224 IPI:IPI00689727 RefSeq:NP_001073256.1 UniGene:Bt.177
ProteinModelPortal:Q3ZBL9 SMR:Q3ZBL9 STRING:Q3ZBL9 GeneID:615512
KEGG:bta:615512 CTD:902 HOGENOM:HOG000232149 HOVERGEN:HBG050840
InParanoid:Q3ZBL9 OrthoDB:EOG47SSF4 NextBio:20899653 Uniprot:Q3ZBL9
Length = 320
Score = 360 (131.8 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 90/248 (36%), Positives = 144/248 (58%)
Query: 70 PKPLNIEEEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNI 127
P L EE ++ +YE +L E CS F P + TA +YFKRFYL SVME+HP+ I
Sbjct: 45 PVFLEPHEEITLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRII 104
Query: 128 MLTCVYAACKIEENHVSAEE-LGK------GISQDHQMILNYEMIVYQALEFDLIVYPPY 180
MLTC + ACK++E +VS+ + +G G + + IL YE+++ Q L F LIV+ PY
Sbjct: 105 MLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKTLEQILEYELLLIQQLNFHLIVHNPY 164
Query: 181 RPLEGFINDMED-FCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQVLSVIQLA 239
RP EGF+ D++ + ++N E+ L +TA ++++ LTDA LL+ P Q+ A
Sbjct: 165 RPFEGFLIDLKTRYPLLENPEI-----LRKTADDFLNRVALTDAHLLYTPSQI------A 213
Query: 240 LAALRNSNKVQRVVNYESYLSSILSRQNSGHIISDLTENLDTIDSWVMKYKFPSEKDMKH 299
L A+ +S + + ESYLS L + + +S L + + ++ + V KY+ P +++
Sbjct: 214 LTAILSSAS-RAGITMESYLSESLMLKENRTSLSQLLDIMKSMRNLVKKYEPPRPEEVAA 272
Query: 300 INRKLKSC 307
+ +KL+ C
Sbjct: 273 LKQKLERC 280
Score = 43 (20.2 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 4 FQTSTHRANWIFTPQELIEKYKA-SNRR 30
+ S+ + +W F +E + + +A +NR+
Sbjct: 2 YHNSSQKRHWTFASEEQLARLRADANRK 29
>UNIPROTKB|C9K506 [details] [associations]
symbol:CCNH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0008353 "RNA polymerase II carboxy-terminal domain kinase
activity" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0000079 "regulation of cyclin-dependent
protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0045944 GO:GO:0006366
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0008353
eggNOG:COG5333 PANTHER:PTHR10026 KO:K06634 GO:GO:0005675
PANTHER:PTHR10026:SF8 GeneTree:ENSGT00390000008634
TIGRFAMs:TIGR00569 CTD:902 OrthoDB:EOG47SSF4 OMA:EILATCV
GO:GO:0019907 GO:GO:0008094 EMBL:FP340351 EMBL:AB499892
RefSeq:NP_001159785.1 UniGene:Ssc.11994 STRING:C9K506
Ensembl:ENSSSCT00000015451 GeneID:100310796 KEGG:ssc:100310796
Uniprot:C9K506
Length = 323
Score = 360 (131.8 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 90/248 (36%), Positives = 145/248 (58%)
Query: 72 PLNIE--EEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNI 127
P+ +E EE + +YE +L E CS F P + TA +YFKRFYL SVME+HP+ I
Sbjct: 45 PIFLEPHEEMILCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRII 104
Query: 128 MLTCVYAACKIEENHVSAEE-LGK----GISQDH--QMILNYEMIVYQALEFDLIVYPPY 180
MLTC + ACK++E +VS+ + +G + Q+ + IL YE+++ Q L F LIV+ PY
Sbjct: 105 MLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPY 164
Query: 181 RPLEGFINDMED-FCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQVLSVIQLA 239
RP EGF+ D++ + ++N E+ L +TA + ++ LTDA LL+ P Q+ A
Sbjct: 165 RPFEGFLIDLKTRYPMLENPEI-----LRKTADDFLSRVALTDAHLLYTPSQI------A 213
Query: 240 LAALRNSNKVQRVVNYESYLSSILSRQNSGHIISDLTENLDTIDSWVMKYKFPSEKDMKH 299
L A+ +S + + ESYLS L + + +S L + + ++ + V KY+ P +++
Sbjct: 214 LTAILSSAS-RAGITMESYLSESLMLKENRTSLSQLLDIMKSMRNLVKKYEPPRSEEVAV 272
Query: 300 INRKLKSC 307
+ +KL+ C
Sbjct: 273 LKQKLERC 280
Score = 43 (20.2 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 4 FQTSTHRANWIFTPQELIEKYKA-SNRR 30
+ S+ + +W F +E + + +A +NR+
Sbjct: 2 YHNSSQKRHWTFASEEQLARLRADANRK 29
>UNIPROTKB|F1MG12 [details] [associations]
symbol:CCNH "Cyclin-H" species:9913 "Bos taurus"
[GO:0070985 "TFIIK complex" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GO:GO:0005675 PANTHER:PTHR10026:SF8
GeneTree:ENSGT00390000008634 TIGRFAMs:TIGR00569 IPI:IPI00689727
UniGene:Bt.177 OMA:EILATCV EMBL:DAAA02021165 EMBL:DAAA02021166
Ensembl:ENSBTAT00000035017 Uniprot:F1MG12
Length = 320
Score = 359 (131.4 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 90/248 (36%), Positives = 145/248 (58%)
Query: 70 PKPLNIEEEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNI 127
P L EE ++ +YE +L E CS F P + TA +YFKRFYL SVME+HP+ I
Sbjct: 45 PVFLEPHEEITLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRII 104
Query: 128 MLTCVYAACKIEENHVSAEE-LGK----GISQDH--QMILNYEMIVYQALEFDLIVYPPY 180
MLTC + ACK++E +VS+ + +G + Q+ + IL YE+++ Q L F LIV+ PY
Sbjct: 105 MLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPY 164
Query: 181 RPLEGFINDMED-FCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQVLSVIQLA 239
RP EGF+ D++ + ++N E+ L +TA ++++ LTDA LL+ P Q+ A
Sbjct: 165 RPFEGFLIDLKTRYPLLENPEI-----LRKTADDFLNRVALTDAHLLYTPSQI------A 213
Query: 240 LAALRNSNKVQRVVNYESYLSSILSRQNSGHIISDLTENLDTIDSWVMKYKFPSEKDMKH 299
L A+ +S + + ESYLS L + + +S L + + ++ + V KY+ P +++
Sbjct: 214 LTAILSSAS-RAGITMESYLSESLMLKENRTSLSQLLDIMKSMRNLVKKYEPPRPEEVAA 272
Query: 300 INRKLKSC 307
+ +KL+ C
Sbjct: 273 LKQKLERC 280
Score = 43 (20.2 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 4 FQTSTHRANWIFTPQELIEKYKA-SNRR 30
+ S+ + +W F +E + + +A +NR+
Sbjct: 2 YHNSSQKRHWTFASEEQLARLRADANRK 29
>UNIPROTKB|E2QYZ5 [details] [associations]
symbol:CCNH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070985 "TFIIK complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
GO:GO:0005675 PANTHER:PTHR10026:SF8 GeneTree:ENSGT00390000008634
TIGRFAMs:TIGR00569 EMBL:AAEX03002082 Ensembl:ENSCAFT00000013308
Uniprot:E2QYZ5
Length = 326
Score = 325 (119.5 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 80/217 (36%), Positives = 130/217 (59%)
Query: 99 PNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAEE-LGK----GIS 153
P + TA +YFKRFYL SVME+HP+ IMLTC + ACK++E +VS+ + +G +
Sbjct: 79 PTLVLGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLG 138
Query: 154 QDH--QMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMED-FCQVKNGELQMLKDLHET 210
Q+ + IL YE+++ Q L F LIV+ PYRP EGF+ D++ + ++N E+ L +T
Sbjct: 139 QEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPMMENPEM-----LRKT 193
Query: 211 AKLEVDKIMLTDAPLLFPPGQVLSVIQLALAALRNSNKVQRVVNYESYLSSILSRQNSGH 270
A +++I LTDA LL+ P Q+ AL A+ +S + + ESYLS L + +
Sbjct: 194 ADDFLNRIALTDAYLLYTPSQI------ALTAILSSAS-RAGITMESYLSESLMLKENRT 246
Query: 271 IISDLTENLDTIDSWVMKYKFPSEKDMKHINRKLKSC 307
+S L + + ++ + V KY+ P +++ + +KL+ C
Sbjct: 247 CLSQLLDIMKSMRNLVKKYEPPRSEEVAALKQKLERC 283
Score = 43 (20.2 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 4 FQTSTHRANWIFTPQELIEKYKA-SNRR 30
+ S+ + +W F +E + + +A +NR+
Sbjct: 2 YHNSSQKRHWTFASEEQLARLRADANRK 29
>UNIPROTKB|E1BCT0 [details] [associations]
symbol:E1BCT0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070985 "TFIIK complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
GO:GO:0005675 PANTHER:PTHR10026:SF8 GeneTree:ENSGT00390000008634
TIGRFAMs:TIGR00569 OMA:ACFYLAM EMBL:DAAA02043038 IPI:IPI00692730
Ensembl:ENSBTAT00000015470 Uniprot:E1BCT0
Length = 323
Score = 314 (115.6 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 84/246 (34%), Positives = 137/246 (55%)
Query: 70 PKPLNIEEEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNI 127
P L EE ++ +YE +L E CS F + TA +YFK FYL SVM++HP I
Sbjct: 46 PVFLEPHEEITLCKYYEKRLLEFCSLFKPAMSRSVVGTACMYFKSFYLNNSVMKYHPWII 105
Query: 128 MLTCVYAACKIEENHVSAEELGK----GISQDH--QMILNYEMIVYQALEFDLIVYPPYR 181
MLTC + ACK++E +VS + G + Q+ + IL YE+++ Q L F LIV+ PYR
Sbjct: 106 MLTCEFLACKVDEFNVSRPQFGNLWESPLVQEKALEQILEYELLIQQ-LNFHLIVHNPYR 164
Query: 182 PLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQVLSVIQLALA 241
P EG+ ++ + + L+ + L +TA ++++ LTDA LL+ P Q+ AL
Sbjct: 165 PFEGYYRPID--LKTRYPLLENPEILRKTADDFLNRVALTDAHLLYTPSQI------ALT 216
Query: 242 ALRNSNKVQRVVNYESYLSSILSRQNSGHIISDLTENLDTIDSWVMKYKFPSEKDMKHIN 301
A+ +S + + ESYLS L + + +S L + + ++ + V KY+ P +++ +
Sbjct: 217 AILSSAS-RAGITMESYLSESLMLKENRTSLSQLLDIMKSMRNLVKKYEPPKPEEVA-LK 274
Query: 302 RKLKSC 307
+KL+ C
Sbjct: 275 QKLERC 280
Score = 46 (21.3 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 4 FQTSTHRANWIFTPQELIEKYKASNRR 30
+ S+ + +W F +E + + SNR+
Sbjct: 2 YHNSSQKRHWTFAREEQLARLPPSNRK 28
>ZFIN|ZDB-GENE-050320-13 [details] [associations]
symbol:ccnh "cyclin H" species:7955 "Danio rerio"
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0070985 "TFIIK complex"
evidence=IEA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 ZFIN:ZDB-GENE-050320-13 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
TIGRFAMs:TIGR00569 CTD:902 HOVERGEN:HBG050840 EMBL:BC091559
EMBL:DQ294346 IPI:IPI00510205 RefSeq:NP_001013471.1
UniGene:Dr.95737 SMR:Q5BJA4 STRING:Q5BJA4 GeneID:541325
KEGG:dre:541325 InParanoid:Q5BJA4 NextBio:20879144 Uniprot:Q5BJA4
Length = 319
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 81/243 (33%), Positives = 138/243 (56%)
Query: 73 LNIEEEQSMRVFYENKLREVCSAF--YFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLT 130
LN +EE+ + YE +L + C+ F P + TA +YF+RFYL S+ME+HP+ IMLT
Sbjct: 48 LNEQEEKVLFKHYEKRLLDFCAVFKPVMPKSVVGTACMYFRRFYLNNSLMEYHPRTIMLT 107
Query: 131 CVYAACKIEENHVSA-------EELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPL 183
C Y +CK++E +VS+ +E G + IL YE+++ Q L F L+V+ PYRPL
Sbjct: 108 CAYLSCKVDEFNVSSTQFVGNLQESPAGQERAVDQILEYELLLIQQLNFHLVVHNPYRPL 167
Query: 184 EGFINDMED-FCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQVLSVIQLALAA 242
EGF+ D++ + ++N E+ L ++A+ +++ +TDA LLF P Q+ AL A
Sbjct: 168 EGFLIDLKTRYPLLENPEM-----LRKSAEDFLNRATMTDAGLLFSPSQI------ALTA 216
Query: 243 LRNSNKVQRVVNYESYLSSILSRQNSGHIISDLTENLDTIDSWVMKYKFPSEKDMKHINR 302
+ NS + + + YL+ + + +S + E++ + S V Y+ P +++ +
Sbjct: 217 VLNS-AARAGLKMDVYLNECMGLKEDKETLSKMYESMRRMTSLVKAYELPKAEEVSICKQ 275
Query: 303 KLK 305
KL+
Sbjct: 276 KLE 278
>UNIPROTKB|D6RG18 [details] [associations]
symbol:CCNH "Cyclin-H" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GO:GO:0005675
PANTHER:PTHR10026:SF8 TIGRFAMs:TIGR00569 HOGENOM:HOG000232149
OrthoDB:EOG47SSF4 HGNC:HGNC:1594 ChiTaRS:CCNH EMBL:AC018754
IPI:IPI00965191 ProteinModelPortal:D6RG18 SMR:D6RG18
Ensembl:ENST00000508855 ArrayExpress:D6RG18 Bgee:D6RG18
Uniprot:D6RG18
Length = 255
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 80/217 (36%), Positives = 130/217 (59%)
Query: 99 PNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAEE-LGK----GIS 153
P + TA +YFKRFYL SVME+HP+ IMLTC + ACK++E +VS+ + +G +
Sbjct: 2 PRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLG 61
Query: 154 QDH--QMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMED-FCQVKNGELQMLKDLHET 210
Q+ + IL YE+++ Q L F LIV+ PYRP EGF+ D++ + ++N E+ L +T
Sbjct: 62 QEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEI-----LRKT 116
Query: 211 AKLEVDKIMLTDAPLLFPPGQVLSVIQLALAALRNSNKVQRVVNYESYLSSILSRQNSGH 270
A +++I LTDA LL+ P Q+ AL A+ +S + + ESYLS L + +
Sbjct: 117 ADDFLNRIALTDAYLLYTPSQI------ALTAILSSAS-RAGITMESYLSESLMLKENRT 169
Query: 271 IISDLTENLDTIDSWVMKYKFPSEKDMKHINRKLKSC 307
+S L + + ++ + V KY+ P +++ + +KL+ C
Sbjct: 170 CLSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLERC 206
>UNIPROTKB|D6RHI7 [details] [associations]
symbol:CCNH "Cyclin-H" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 GO:GO:0016301 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GO:GO:0005675
PANTHER:PTHR10026:SF8 TIGRFAMs:TIGR00569 HOGENOM:HOG000232149
HGNC:HGNC:1594 ChiTaRS:CCNH EMBL:AC018754 IPI:IPI00556112
SMR:D6RHI7 Ensembl:ENST00000504878 Uniprot:D6RHI7
Length = 249
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 80/217 (36%), Positives = 130/217 (59%)
Query: 99 PNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAEE-LGK----GIS 153
P + TA +YFKRFYL SVME+HP+ IMLTC + ACK++E +VS+ + +G +
Sbjct: 2 PRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLG 61
Query: 154 QDH--QMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMED-FCQVKNGELQMLKDLHET 210
Q+ + IL YE+++ Q L F LIV+ PYRP EGF+ D++ + ++N E+ L +T
Sbjct: 62 QEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEI-----LRKT 116
Query: 211 AKLEVDKIMLTDAPLLFPPGQVLSVIQLALAALRNSNKVQRVVNYESYLSSILSRQNSGH 270
A +++I LTDA LL+ P Q+ AL A+ +S + + ESYLS L + +
Sbjct: 117 ADDFLNRIALTDAYLLYTPSQI------ALTAILSSAS-RAGITMESYLSESLMLKENRT 169
Query: 271 IISDLTENLDTIDSWVMKYKFPSEKDMKHINRKLKSC 307
+S L + + ++ + V KY+ P +++ + +KL+ C
Sbjct: 170 CLSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLERC 206
>DICTYBASE|DDB_G0268668 [details] [associations]
symbol:cycH "putative H-type cyclin" species:44689
"Dictyostelium discoideum" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR015429 dictyBase:DDB_G0268668
GO:GO:0005634 GO:GO:0000079 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0006351 EMBL:AAFI02000004 GO:GO:0007049 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 eggNOG:COG5333 PANTHER:PTHR10026 HSSP:P51946
KO:K06634 RefSeq:XP_646851.1 ProteinModelPortal:Q55F19
STRING:Q55F19 EnsemblProtists:DDB0231776 GeneID:8616534
KEGG:ddi:DDB_G0268668 InParanoid:Q55F19 OMA:CKTEDNH Uniprot:Q55F19
Length = 286
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 63/177 (35%), Positives = 103/177 (58%)
Query: 68 SRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNI 127
S P L+ ++E S+ +YE K E+ A P+K+ A A++Y KRFYL+ S+M++ K +
Sbjct: 41 SEPNILSPDDELSLIHYYETKTLEIAMALNLPDKVSAPAIIYIKRFYLKNSIMQYGAKLV 100
Query: 128 MLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFI 187
ML+C++ ACK E+NH+ + I N E+I+ ++L F+LIVY P+RP+ G+I
Sbjct: 101 MLSCLFIACKTEDNHLDIDYYSNITKASPSDITNLEIIILESLNFNLIVYHPFRPMYGYI 160
Query: 188 NDMEDFCQVKNGE--LQMLK-D-LHETAKLEVDKIMLTDAPLLFPPGQVLSVIQLAL 240
D+ D + N + +K D L ET K + K + +D F P Q++++ L L
Sbjct: 161 LDINDNSAIYNNTNGVSPIKFDTLWETCKKSIQKSLFSDCCFEFHP-QIIALACLNL 216
>CGD|CAL0002756 [details] [associations]
symbol:orf19.4542 species:5476 "Candida albicans" [GO:0070985
"TFIIK complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0071901 "negative regulation of protein
serine/threonine kinase activity" evidence=IEA] [GO:0070816
"phosphorylation of RNA polymerase II C-terminal domain"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0004861 "cyclin-dependent protein
serine/threonine kinase inhibitor activity" evidence=IEA]
InterPro:IPR015429 InterPro:IPR027081 CGD:CAL0002756 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
eggNOG:COG5333 PANTHER:PTHR10026 KO:K06634 GO:GO:0005675
PANTHER:PTHR10026:SF8 EMBL:AACQ01000143 EMBL:AACQ01000140
RefSeq:XP_712873.1 RefSeq:XP_712967.1 ProteinModelPortal:Q59T89
STRING:Q59T89 GeneID:3645435 GeneID:3645529 KEGG:cal:CaO19.12017
KEGG:cal:CaO19.4542 Uniprot:Q59T89
Length = 395
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 90/312 (28%), Positives = 152/312 (48%)
Query: 4 FQTSTHRANWIFTPQELIEKYKASNRRAIQTLEKYGTTQMEVDVDGSFSYPEPQNNAKDN 63
++ ST W FT + L + + +N + ++ ++ + E + +P+ D
Sbjct: 28 YRNSTQYELWSFTQETLQDAKREANEKGVKISKERFKSAFE---NAKKEHPDAFEQFPDE 84
Query: 64 SEKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHH 123
++ L +EEE + FY + C+ F P +++ TA +FK+FYL SVME H
Sbjct: 85 LNENM-VSLLTLEEESTYLDFYIQNITTTCNFFKMPTQVRLTAASFFKKFYLVNSVMEFH 143
Query: 124 PKNIMLTCVYAACKIEENHVSAEELGKGIS-QDHQMILNYEMIVYQALEFDLIVYPPYRP 182
PKN++ TC++ A K E +S E K + D IL+ E IV Q+L+F L+V+ P R
Sbjct: 144 PKNVLYTCIFLAAKSENYFISIESYVKALKGTDTSHILDLEFIVLQSLKFTLLVHHPIRA 203
Query: 183 LEGFINDMEDFC----QVK-NGELQMLKDLHETAKLEVDK-IMLTDAPLLFPPGQVLSVI 236
L GF D + QV + + L +++ AK ++K M++D LF P Q+
Sbjct: 204 LYGFFLDFQAVLLHPEQVMYDVSVDTLGNMYNQAKEWLNKYFMVSDVAFLFTPPQI---- 259
Query: 237 QLALAALRNSNKVQRVVNYESYLS-SILSRQNSGHIISDLTENLDTIDSWVMKYKFPSEK 295
ALAA+ +++K R+ + YL L + I + EN + + K SE+
Sbjct: 260 --ALAAMYDTDK--RIT--DKYLRRKYLGNEEKLDPIKE-QENENEKQNGEDKSVVASEE 312
Query: 296 DMKHINR-KLKS 306
K +++ K KS
Sbjct: 313 ASKDVSKEKTKS 324
>FB|FBgn0022936 [details] [associations]
symbol:CycH "Cyclin H" species:7227 "Drosophila melanogaster"
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=ISS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0005675 "holo TFIIH complex" evidence=ISS;IDA] [GO:0008353 "RNA
polymerase II carboxy-terminal domain kinase activity"
evidence=IDA] [GO:0004693 "cyclin-dependent protein
serine/threonine kinase activity" evidence=IDA] [GO:0032806
"carboxy-terminal domain protein kinase complex" evidence=IDA]
[GO:0070985 "TFIIK complex" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 GO:GO:0007049 GO:GO:0006367
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
HSSP:P51946 GO:GO:0005675 PANTHER:PTHR10026:SF8 TIGRFAMs:TIGR00569
GO:GO:0032806 EMBL:AF024618 ProteinModelPortal:O17144 IntAct:O17144
STRING:O17144 PRIDE:O17144 FlyBase:FBgn0022936 InParanoid:O17144
OrthoDB:EOG4VDNF8 ArrayExpress:O17144 Bgee:O17144 Uniprot:O17144
Length = 325
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 85/291 (29%), Positives = 140/291 (48%)
Query: 24 YKASNRRAIQTLEKYGTTQMEVDVDGSFSYPEPQNNAKDNSEKHSRPKPLNIEEEQSMRV 83
Y S+++ T G ME V+ + Y E + + L EE+ +
Sbjct: 3 YPVSSQKRSWTFANEGQL-MEFRVEQNSKYIESHEEEAQGRDLNEHF--LTSAEERLLLK 59
Query: 84 FYENKLREVCSAFY--FPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEEN 141
YE L + C F P + TA YFKRFYL S M++HPK I+ TCV+ ACK+EE
Sbjct: 60 QYEIYLFDFCRRFEPTMPKCVVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKVEEF 119
Query: 142 HVSAEELGKGISQDHQ----MILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVK 197
+VS + I D ++L+ E+++ L + L ++ P+RP+EGF+ D++ ++
Sbjct: 120 NVSINQFVNNIKGDRNKATDIVLSNELLLIGQLNYYLTIHNPFRPIEGFLIDIKTRSNMQ 179
Query: 198 NGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQVLSVIQLALAA-LRNSNKVQRVVNYE 256
N + L +D +DA LL P Q+ ALAA L +++ Q N +
Sbjct: 180 NPDR-----LRPHIDSFIDSTYYSDACLLHTPSQI------ALAAVLHAASREQE--NLD 226
Query: 257 SYLSSILSRQNSGHIISDLTENLDTIDSWVMKYKFPSEKDMKHINRKLKSC 307
SY++ +L ++ + L + + I V +Y+ P + +K I +KL C
Sbjct: 227 SYVTDLLF-VSAREKLPGLIDAVRKIRIMVKQYQQPDREKVKAIEKKLDKC 276
>POMBASE|SPBP16F5.02 [details] [associations]
symbol:mcs2 "TFIIH complex cyclin Mcs2" species:4896
"Schizosaccharomyces pombe" [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0000718 "nucleotide-excision repair, DNA damage
removal" evidence=ISS] [GO:0004861 "cyclin-dependent protein
serine/threonine kinase inhibitor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005675 "holo TFIIH complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISO] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IGI] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 PomBase:SPBP16F5.02 GO:GO:0007346 GO:GO:0000079
GO:GO:0051301 GO:GO:0006355 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0007049 GO:GO:0006367 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0004861 PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8 OrthoDB:EOG4CRQ82
TIGRFAMs:TIGR00569 GO:GO:0000718 EMBL:S59895 PIR:S35380
RefSeq:NP_595776.1 ProteinModelPortal:P36613 IntAct:P36613
STRING:P36613 EnsemblFungi:SPBP16F5.02.1 GeneID:2540555
KEGG:spo:SPBP16F5.02 HOGENOM:HOG000197843 OMA:ACFYLAM
NextBio:20801681 Uniprot:P36613
Length = 322
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 85/250 (34%), Positives = 137/250 (54%)
Query: 2 AD-FQTSTHRANWIFTPQELIEKYKASNRRAIQTLEKYGTTQMEVDVDGSFSYPEPQNNA 60
AD F+ STH +WIFT ++L S RA + EK+ E ++ S QN
Sbjct: 3 ADKFRDSTHYRDWIFTEEDL------SKTRA-KVNEKFTNIVRERMLE-ELSL---QN-- 49
Query: 61 KDNSEKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVM 120
K+ S + P L +EEE + +Y +L + SA P I++TA+L+FKRFYL SVM
Sbjct: 50 KEASLE-VLPPTLTVEEELELVNYYSFQLNALSSALSLPTHIRSTAILFFKRFYLINSVM 108
Query: 121 EHHPKNIMLTCVYAACKIEENHVSAEELGKGISQDH-QMILNYEMIVYQALEFDLIVYPP 179
E+ PK I T ++ A K ++++S E+ K + + + +L YE V Q+L++DL V+ P
Sbjct: 109 EYSPKIISFTSLFLATKCNDHYISIEQFCKNMPKTTPEEVLEYEFNVCQSLKWDLYVWLP 168
Query: 180 YRPLEGFINDMEDFCQVKNGELQMLK--DLHETAKLEVDKIMLTDAPLLFPPGQVLSVIQ 237
+RPL+GF+ D CQ ++ + K + H+ +K + + + +D L P S+I
Sbjct: 169 FRPLQGFLLD----CQTVLPKVAVEKFYECHDLSKKFLIETLHSDIYFLHSP----SII- 219
Query: 238 LALAALRNSN 247
AL A+ ++N
Sbjct: 220 -ALGAIYHTN 228
>SGD|S000006229 [details] [associations]
symbol:CCL1 "Cyclin associated with protein kinase Kin28p"
species:4932 "Saccharomyces cerevisiae" [GO:0070985 "TFIIK complex"
evidence=IEA;IDA] [GO:0070816 "phosphorylation of RNA polymerase II
C-terminal domain" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0000990 "core RNA polymerase binding
transcription factor activity" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005675 "holo
TFIIH complex" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA;IGI;IPI] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR015429 InterPro:IPR027081 SGD:S000006229
GO:GO:0005739 GO:GO:0000079 GO:GO:0006366 EMBL:Z71255 EMBL:BK006949
EMBL:Z49274 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0070816 GO:GO:0016538 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 KO:K06634 PANTHER:PTHR10026:SF8 EMBL:X71902
PIR:S39383 RefSeq:NP_015350.1 ProteinModelPortal:P37366 SMR:P37366
DIP:DIP-2258N IntAct:P37366 MINT:MINT-528773 STRING:P37366
PaxDb:P37366 PeptideAtlas:P37366 EnsemblFungi:YPR025C GeneID:856136
KEGG:sce:YPR025C CYGD:YPR025c GeneTree:ENSGT00390000008634
HOGENOM:HOG000247914 OMA:EDDIYRT OrthoDB:EOG4CRQ82 NextBio:981239
Genevestigator:P37366 GermOnline:YPR025C GO:GO:0070985
TIGRFAMs:TIGR00569 Uniprot:P37366
Length = 393
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 61/230 (26%), Positives = 116/230 (50%)
Query: 4 FQTSTHRANWIFTPQELIEKYKASNRRAIQTLEKYGTTQMEVDVDGSFSYPEPQNNAKDN 63
++ S+ W +T +L EK +N RAI +E + + E N ++
Sbjct: 49 YRHSSQYRMWSYTKDQLQEKRVDTNARAIAYIE-----------ENLLKFREAHNLTEEE 97
Query: 64 SEK-HSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEH 122
+ ++ PL +EEE + FY K++ + P ++ ATA+ +F+RF+L+ SVM+
Sbjct: 98 IKVLEAKAIPLTMEEELDLVNFYAKKVQVIAQHLNLPTEVVATAISFFRRFFLENSVMQI 157
Query: 123 HPKNIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRP 182
PK+I+ T ++ ACK E +S + + +L +E + ++L+F L+ + PY+P
Sbjct: 158 DPKSIVHTTIFLACKSENYFISVDSFAQKAKSTRDSVLKFEFKLLESLKFSLLNHHPYKP 217
Query: 183 LEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQV 232
L GF D+++ K +L + +++ K + +LTD + P Q+
Sbjct: 218 LHGFFLDIQNVLYGKV-DLNYMGQIYDRCKKRITAALLTDVVYFYTPPQI 266
>ASPGD|ASPL0000048807 [details] [associations]
symbol:AN2211 species:162425 "Emericella nidulans"
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0070816 "phosphorylation of RNA polymerase II C-terminal
domain" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0070985 "TFIIK complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004861
"cyclin-dependent protein serine/threonine kinase inhibitor
activity" evidence=IEA] [GO:0000079 "regulation of cyclin-dependent
protein serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] InterPro:IPR015429
InterPro:IPR027081 GO:GO:0000079 GO:GO:0006355 EMBL:BN001307
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 eggNOG:COG5333
PANTHER:PTHR10026 KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
OMA:EDDIYRT OrthoDB:EOG4CRQ82 EMBL:AACD01000035 RefSeq:XP_659815.1
ProteinModelPortal:Q5BB69 STRING:Q5BB69
EnsemblFungi:CADANIAT00008895 GeneID:2875348 KEGG:ani:AN2211.2
HOGENOM:HOG000172846 Uniprot:Q5BB69
Length = 429
Score = 194 (73.4 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 58/200 (29%), Positives = 93/200 (46%)
Query: 4 FQTSTHRANWIFTPQELIEKYKASNRRAIQTLEKYGTTQMEVDVDGSFSYP-EPQNNAKD 62
++TS+ W FT + L + +NR A + E + S P NA D
Sbjct: 7 YRTSSQYRLWSFTEETLRSVRQNTNRLASDRVRVALRRAREARQSANSSAAGTPNANASD 66
Query: 63 NSEKHSRPKPLNI---EEEQSMRVFYENKLREVCSAFY--FPNKIQATALLYFKRFYLQW 117
K S K + EEEQ + +Y ++ ++ ++ P ++ATA+ Y +RFYL
Sbjct: 67 VDSKTSEEKDIECLTPEEEQDLVRYYCEQIIQLGESYKPPLPTIVRATAIQYLRRFYLTN 126
Query: 118 SVMEHHPKNIMLTCVYAACKIEENHVSAEELGKGISQDH--QMILNYEMIVYQALEFDLI 175
S M +HPK IM ++ A K + ++S G+ D + I+ E +V Q+L F
Sbjct: 127 SPMTYHPKTIMPCALFIATKTDNYYMSLRHFADGVPGDTTAEDIIAPEFLVMQSLRFTFD 186
Query: 176 VYPPYRPLEGFINDMEDFCQ 195
V P+R LEG I ++ Q
Sbjct: 187 VRHPFRGLEGGIMELNAIAQ 206
Score = 60 (26.2 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 26/105 (24%), Positives = 44/105 (41%)
Query: 208 HETAKLEVDKIMLTDAPLLFPPGQV-LSVIQLA---LAALRNSNKVQRVVNYESYLSSIL 263
H T ++ +TDA L+ P Q+ LS + +A LA K+ E+ L
Sbjct: 253 HNTREILKSAAQMTDAYFLYTPSQIWLSALSIADQPLAQFYLDTKLPTPNASETGNEHPL 312
Query: 264 SRQNSGHIISDLTENLDTIDSWVMKYKFPSEKD-MKHINRKLKSC 307
+ + ++ LT + S+ P +K M+ I +KL C
Sbjct: 313 AHLRA-KVLQTLTSCATLLQSYKPLASDPEQKKAMRRIGKKLYHC 356
>WB|WBGene00021714 [details] [associations]
symbol:cyh-1 species:6239 "Caenorhabditis elegans"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0005675
"holo TFIIH complex" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0000079 GO:GO:0002119
GO:GO:0006355 GO:GO:0010171 GO:GO:0040011 GO:GO:0040035
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 eggNOG:COG5333
PANTHER:PTHR10026 HSSP:P51946 KO:K06634 GO:GO:0005675
PANTHER:PTHR10026:SF8 GeneTree:ENSGT00390000008634 OMA:ACFYLAM
EMBL:FO080566 RefSeq:NP_494564.2 ProteinModelPortal:Q9N4U0
SMR:Q9N4U0 STRING:Q9N4U0 PaxDb:Q9N4U0 EnsemblMetazoa:Y49F6B.1
GeneID:190078 KEGG:cel:CELE_Y49F6B.1 UCSC:Y49F6B.1 CTD:190078
WormBase:Y49F6B.1 HOGENOM:HOG000021232 InParanoid:Q9N4U0
NextBio:944568 Uniprot:Q9N4U0
Length = 332
Score = 201 (75.8 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 62/227 (27%), Positives = 112/227 (49%)
Query: 34 TLEKYGTTQMEVDVDGSFSYPEPQNNAKDNSEKHSRPKPLNIEEEQSMRVFYENKLREVC 93
T EK ++E+++ Y D E P EEE M+ E+ +
Sbjct: 14 TPEKLAAMRLEINIKFRQKYESVMQ--PDELELFVTP-----EEELRMQRSIEDAALKFA 66
Query: 94 SAF---YFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEENHVSAEELGK 150
F +P+ ++ TAL +FKR +L W + + +M+ C Y A KI+E +++ E+ K
Sbjct: 67 DKFRPHIWPS-VKWTALAFFKRAFLVWVPSDTSIRMVMMACFYLAMKIDEFYITIEDFVK 125
Query: 151 GIS-----QDHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLK 205
++ Q+ + IL E + + L+++L V+ PYRP EG + DM+ + N +L+ ++
Sbjct: 126 NMNVGEPRQNAERILKLEPELMKILDYNLTVHCPYRPYEGHLMDMKTRMLLLNFDLESIR 185
Query: 206 DLHETAKLEVDKIMLTDAPLLFPPGQV-LSVIQLALAALRNSNKVQR 251
++ + + TD LL+PP Q+ L+ I L A S+++ R
Sbjct: 186 --RDSMRF-FQNALQTDVLLLYPPSQIALAAINFGLHAQGKSDEILR 229
>UNIPROTKB|F1NTI7 [details] [associations]
symbol:CCNC "Cyclin-C" species:9031 "Gallus gallus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GeneTree:ENSGT00690000101911
EMBL:AADN02002249 IPI:IPI00600334 Ensembl:ENSGALT00000037234
ArrayExpress:F1NTI7 Uniprot:F1NTI7
Length = 177
Score = 115 (45.5 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 83
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 84 VLMAPTCVFLASKVEE 99
Score = 73 (30.8 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 159 ILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFC 194
IL E + + ++ LIVY PYRPL ++ DM C
Sbjct: 135 ILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEC 170
Score = 42 (19.8 bits), Expect = 3.8e-11, Sum P(3) = 3.8e-11
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 3 DFQTSTHRANWIFTPQELIEK 23
+F S+H WI Q+L+++
Sbjct: 4 NFWQSSHYLQWILDKQDLLKE 24
>UNIPROTKB|G5E954 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 EMBL:CH471051 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0016591 PANTHER:PTHR10026 EMBL:AL137784
UniGene:Hs.430646 UniGene:Hs.633351 HGNC:HGNC:1581
ProteinModelPortal:G5E954 SMR:G5E954 Ensembl:ENST00000326298
ArrayExpress:G5E954 Bgee:G5E954 Uniprot:G5E954
Length = 202
Score = 115 (45.5 bits), Expect = 5.6e-11, Sum P(3) = 5.6e-11
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 83
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 84 VLMAPTCVFLASKVEE 99
Score = 81 (33.6 bits), Expect = 5.6e-11, Sum P(3) = 5.6e-11
Identities = 28/78 (35%), Positives = 38/78 (48%)
Query: 159 ILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKI 218
IL E + + ++ LIVY PYRPL ++ DM G+ ML L A V+
Sbjct: 135 ILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWRIVNDT 183
Query: 219 MLTDAPLLFPPGQVLSVI 236
TD LL+PP + VI
Sbjct: 184 YRTDLCLLYPPFMIALVI 201
Score = 42 (19.8 bits), Expect = 5.6e-11, Sum P(3) = 5.6e-11
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 3 DFQTSTHRANWIFTPQELIEK 23
+F S+H WI Q+L+++
Sbjct: 4 NFWQSSHYLQWILDKQDLLKE 24
>TAIR|locus:2152556 [details] [associations]
symbol:AT5G48640 species:3702 "Arabidopsis thaliana"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA;ISS]
[GO:0010440 "stomatal lineage progression" evidence=RCA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000079 GO:GO:0051301
GO:GO:0006355 GO:GO:0007049 EMBL:AB015468 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0016591 PROSITE:PS00292 EMBL:BX833973
IPI:IPI00545165 RefSeq:NP_199675.2 UniGene:At.50515
ProteinModelPortal:Q9FJK6 SMR:Q9FJK6 PRIDE:Q9FJK6
EnsemblPlants:AT5G48640.1 GeneID:834921 KEGG:ath:AT5G48640
GeneFarm:4108 TAIR:At5g48640 eggNOG:COG5333 HOGENOM:HOG000008007
InParanoid:Q9FJK6 KO:K15161 OMA:ATAITYM PhylomeDB:Q9FJK6
ProtClustDB:CLSN2686764 Genevestigator:Q9FJK6 PANTHER:PTHR10026
Uniprot:Q9FJK6
Length = 253
Score = 163 (62.4 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 39/130 (30%), Positives = 73/130 (56%)
Query: 69 RPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIM 128
+ + ++I++ + ++ N + ++ ++ ATA+ Y +R Y++ S++E P+ +
Sbjct: 28 KERGISIDDFKLIKFHMSNHIMKLAQHIKVRQRVVATAITYMRRVYIRKSMVEFEPRLVA 87
Query: 129 LTCVYAACKIEENHVSAEELG---KGISQD----HQM--ILNYEMIVYQALEFDLIVYPP 179
LTC+Y A K EE+ V A L K + D +++ IL EM V +AL++ L+V+ P
Sbjct: 88 LTCLYLASKAEESIVQARNLVFYIKRLYPDEYNKYELKDILGMEMKVLEALDYYLVVFHP 147
Query: 180 YRPLEGFIND 189
YR L F+ D
Sbjct: 148 YRSLSEFLQD 157
>UNIPROTKB|F1RXY0 [details] [associations]
symbol:CCNC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016592 "mediator complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0016591 "DNA-directed
RNA polymerase II, holoenzyme" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
PANTHER:PTHR10026 GeneTree:ENSGT00690000101911 OMA:FFANVIQ
GO:GO:0016592 EMBL:CU041276 Ensembl:ENSSSCT00000004810
Uniprot:F1RXY0
Length = 282
Score = 153 (58.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 58/192 (30%), Positives = 93/192 (48%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 83
Query: 125 KNIMLTCVYAACKIEE-NHVSAEEL---GKGISQD----------HQM--ILNYEMIVYQ 168
+ TCV+ A K+EE VS L +S+ ++M IL E + +
Sbjct: 84 VLMAPTCVFLASKVEEFGVVSNTRLISAATSVSKTRFSYAFPRFPYRMNHILECEFYLLE 143
Query: 169 ALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFP 228
++ LIVY PYRPL ++ DM G+ ML L A V+ TD LL+P
Sbjct: 144 LMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWRIVNDTYRTDLCLLYP 192
Query: 229 PGQV-LSVIQLA 239
P + L+ + +A
Sbjct: 193 PFMIALACLHVA 204
Score = 42 (19.8 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 3 DFQTSTHRANWIFTPQELIEK 23
+F S+H WI Q+L+++
Sbjct: 4 NFWQSSHYLQWILDKQDLLKE 24
>UNIPROTKB|E5RFK5 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PANTHER:PTHR10026 EMBL:AL137784 HGNC:HGNC:1581
IPI:IPI00979643 SMR:E5RFK5 Ensembl:ENST00000518714
Ensembl:ENST00000520371 Uniprot:E5RFK5
Length = 282
Score = 115 (45.5 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 83
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 84 VLMAPTCVFLASKVEE 99
Score = 78 (32.5 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 28/82 (34%), Positives = 41/82 (50%)
Query: 159 ILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKI 218
IL E + + ++ LIVY PYRPL ++ DM G+ ML L A V+
Sbjct: 135 ILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWRIVNDT 183
Query: 219 MLTDAPLLFPPGQV-LSVIQLA 239
TD LL+PP + L+ + +A
Sbjct: 184 YRTDLCLLYPPFMIALACLHVA 205
Score = 42 (19.8 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 3 DFQTSTHRANWIFTPQELIEK 23
+F S+H WI Q+L+++
Sbjct: 4 NFWQSSHYLQWILDKQDLLKE 24
>UNIPROTKB|P55168 [details] [associations]
symbol:CCNC "Cyclin-C" species:9031 "Gallus gallus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016592 "mediator complex" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
GO:GO:0006351 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007
KO:K15161 PANTHER:PTHR10026 CTD:892 GeneTree:ENSGT00690000101911
HOVERGEN:HBG050836 OMA:FFANVIQ OrthoDB:EOG4G1MGX GO:GO:0016592
EMBL:U40873 IPI:IPI00954739 RefSeq:NP_001161237.1 UniGene:Gga.9076
ProteinModelPortal:P55168 STRING:P55168 Ensembl:ENSGALT00000024947
GeneID:421791 KEGG:gga:421791 InParanoid:P55168 NextBio:20824510
ArrayExpress:P55168 Uniprot:P55168
Length = 283
Score = 115 (45.5 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 83
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 84 VLMAPTCVFLASKVEE 99
Score = 78 (32.5 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 28/82 (34%), Positives = 41/82 (50%)
Query: 159 ILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKI 218
IL E + + ++ LIVY PYRPL ++ DM G+ ML L A V+
Sbjct: 135 ILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWRIVNDT 183
Query: 219 MLTDAPLLFPPGQV-LSVIQLA 239
TD LL+PP + L+ + +A
Sbjct: 184 YRTDLCLLYPPFMIALACLHVA 205
Score = 42 (19.8 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 3 DFQTSTHRANWIFTPQELIEK 23
+F S+H WI Q+L+++
Sbjct: 4 NFWQSSHYLQWILDKQDLLKE 24
>UNIPROTKB|P24863 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0000079
GO:GO:0005654 GO:GO:0045944 GO:GO:0007219 GO:GO:0007179
GO:GO:0006367 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007
KO:K15161 PANTHER:PTHR10026 CTD:892 HOVERGEN:HBG050836 OMA:FFANVIQ
OrthoDB:EOG4G1MGX GO:GO:0016592 EMBL:M74091 EMBL:U40739 EMBL:U40728
EMBL:U40729 EMBL:U40730 EMBL:U40731 EMBL:U40732 EMBL:U40733
EMBL:U40734 EMBL:U40735 EMBL:U40736 EMBL:U40737 EMBL:U40738
EMBL:AK298558 EMBL:AL137784 IPI:IPI00031076 IPI:IPI00554688
PIR:A40268 RefSeq:NP_001013417.1 RefSeq:NP_005181.2
UniGene:Hs.430646 UniGene:Hs.633351 PDB:3RGF PDBsum:3RGF
ProteinModelPortal:P24863 SMR:P24863 DIP:DIP-32920N IntAct:P24863
STRING:P24863 PhosphoSite:P24863 DMDM:166214910 PRIDE:P24863
DNASU:892 Ensembl:ENST00000520429 Ensembl:ENST00000523799
Ensembl:ENST00000523985 GeneID:892 KEGG:hsa:892 UCSC:uc003pqd.3
GeneCards:GC06M100037 HGNC:HGNC:1581 HPA:CAB010499 MIM:123838
neXtProt:NX_P24863 PharmGKB:PA26149 InParanoid:P24863
GenomeRNAi:892 NextBio:3690 ArrayExpress:P24863 Bgee:P24863
CleanEx:HS_CCNC Genevestigator:P24863 GermOnline:ENSG00000112237
Uniprot:P24863
Length = 283
Score = 115 (45.5 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 83
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 84 VLMAPTCVFLASKVEE 99
Score = 78 (32.5 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 28/82 (34%), Positives = 41/82 (50%)
Query: 159 ILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKI 218
IL E + + ++ LIVY PYRPL ++ DM G+ ML L A V+
Sbjct: 135 ILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWRIVNDT 183
Query: 219 MLTDAPLLFPPGQV-LSVIQLA 239
TD LL+PP + L+ + +A
Sbjct: 184 YRTDLCLLYPPFMIALACLHVA 205
Score = 42 (19.8 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 3 DFQTSTHRANWIFTPQELIEK 23
+F S+H WI Q+L+++
Sbjct: 4 NFWQSSHYLQWILDKQDLLKE 24
>DICTYBASE|DDB_G0274139 [details] [associations]
symbol:cycC "putative C-type cyclin" species:44689
"Dictyostelium discoideum" [GO:0016591 "DNA-directed RNA polymerase
II, holoenzyme" evidence=IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
PIRSF:PIRSF028758 dictyBase:DDB_G0274139 GO:GO:0005634
GO:GO:0000079 GO:GO:0006355 GenomeReviews:CM000151_GR GO:GO:0006351
EMBL:AAFI02000012 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 GO:GO:0016538 PROSITE:PS00292 eggNOG:COG5333
KO:K15161 PANTHER:PTHR10026 HSSP:O94503 OMA:FFANVIQ
RefSeq:XP_644320.1 ProteinModelPortal:Q86KE7
EnsemblProtists:DDB0231775 GeneID:8619748 KEGG:ddi:DDB_G0274139
ProtClustDB:CLSZ2729216 Uniprot:Q86KE7
Length = 255
Score = 157 (60.3 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 41/135 (30%), Positives = 71/135 (52%)
Query: 63 NSEKHSRPKP---LNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSV 119
N + S PK L E + +R Y ++ + +A + +TA++YFKRFYL+ S
Sbjct: 19 NKIEESNPKDKQYLTPIELKKLRTHYCFVIQNLGNALKLRQRAISTAIVYFKRFYLKNSF 78
Query: 120 MEHHPKNIMLTCVYAACKIEENHVSAEELGKGISQ-DHQM------ILNYEMIVYQALEF 172
++ P+ + +TC+Y + K+EE A++ + + DH IL E V + L+F
Sbjct: 79 VDCEPRLVAVTCLYLSSKVEECITQAKKCAAKMKEIDHSFNYLMNDILECEFFVLEELDF 138
Query: 173 DLIVYPPYRPLEGFI 187
LI+Y PY+ L ++
Sbjct: 139 CLIIYHPYKSLPFYL 153
>UNIPROTKB|Q3ZCK5 [details] [associations]
symbol:CCNC "Cyclin-C" species:9913 "Bos taurus"
[GO:0016592 "mediator complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
GO:GO:0006351 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007
KO:K15161 PANTHER:PTHR10026 EMBL:BC102107 IPI:IPI00709203
RefSeq:NP_001029530.1 UniGene:Bt.16282 HSSP:O94503
ProteinModelPortal:Q3ZCK5 STRING:Q3ZCK5 PRIDE:Q3ZCK5
Ensembl:ENSBTAT00000037858 GeneID:509717 KEGG:bta:509717 CTD:892
GeneTree:ENSGT00690000101911 HOVERGEN:HBG050836 InParanoid:Q3ZCK5
OMA:FFANVIQ OrthoDB:EOG4G1MGX NextBio:20869092 GO:GO:0016592
Uniprot:Q3ZCK5
Length = 283
Score = 115 (45.5 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 83
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 84 VLMAPTCVFLASKVEE 99
Score = 77 (32.2 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 159 ILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKI 218
+L E + + ++ LIVY PYRPL ++ DM G+ ML L A V+
Sbjct: 135 VLECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWRIVNDT 183
Query: 219 MLTDAPLLFPPGQV-LSVIQLA 239
TD LL+PP + L+ + +A
Sbjct: 184 YRTDLCLLYPPFMIALACLHVA 205
Score = 42 (19.8 bits), Expect = 2.6e-09, Sum P(3) = 2.6e-09
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 3 DFQTSTHRANWIFTPQELIEK 23
+F S+H WI Q+L+++
Sbjct: 4 NFWQSSHYLQWILDKQDLLKE 24
>UNIPROTKB|J3KP90 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PANTHER:PTHR10026 EMBL:AL137784 HGNC:HGNC:1581
ProteinModelPortal:J3KP90 Ensembl:ENST00000369220 Uniprot:J3KP90
Length = 282
Score = 115 (45.5 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 83
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 84 VLMAPTCVFLASKVEE 99
Score = 76 (31.8 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 159 ILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKI 218
IL E + + ++ LIVY PYRPL ++ DM G+ ML L A + V+
Sbjct: 135 ILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWI-VNDT 182
Query: 219 MLTDAPLLFPPGQV-LSVIQLA 239
TD LL+PP + L+ + +A
Sbjct: 183 YRTDLCLLYPPFMIALACLHVA 204
Score = 42 (19.8 bits), Expect = 3.2e-09, Sum P(3) = 3.2e-09
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 3 DFQTSTHRANWIFTPQELIEK 23
+F S+H WI Q+L+++
Sbjct: 4 NFWQSSHYLQWILDKQDLLKE 24
>MGI|MGI:1858199 [details] [associations]
symbol:Ccnc "cyclin C" species:10090 "Mus musculus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016591 "DNA-directed RNA
polymerase II, holoenzyme" evidence=IEA] [GO:0016592 "mediator
complex" evidence=IDA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
MGI:MGI:1858199 GO:GO:0000079 GO:GO:0006355 GO:GO:0006351
Reactome:REACT_127416 EMBL:CH466538 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0016591 Reactome:REACT_27166 PROSITE:PS00292
eggNOG:COG5333 HOGENOM:HOG000008007 KO:K15161 PANTHER:PTHR10026
CTD:892 GeneTree:ENSGT00690000101911 HOVERGEN:HBG050836 OMA:FFANVIQ
GO:GO:0016592 EMBL:U62638 EMBL:U49050 EMBL:AL772187 EMBL:BC003344
EMBL:BC120649 EMBL:BC120677 EMBL:AJ243075 EMBL:AJ243076
IPI:IPI00126002 IPI:IPI00880396 RefSeq:NP_058026.2
UniGene:Mm.278584 ProteinModelPortal:Q62447 STRING:Q62447
PhosphoSite:Q62447 PRIDE:Q62447 Ensembl:ENSMUST00000102997
GeneID:51813 KEGG:mmu:51813 InParanoid:Q62447 NextBio:308072
CleanEx:MM_CCNC Genevestigator:Q62447 GermOnline:ENSMUSG00000028252
Uniprot:Q62447
Length = 283
Score = 115 (45.5 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 83
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 84 VLMAPTCVFLASKVEE 99
Score = 74 (31.1 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 159 ILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKI 218
IL E + + ++ LIVY PYRPL ++ DM G+ +L L A V+
Sbjct: 135 ILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDVLLPL---AWRIVNDT 183
Query: 219 MLTDAPLLFPPGQV-LSVIQLA 239
TD LL+PP + L+ + +A
Sbjct: 184 YRTDLCLLYPPFMIALACLHVA 205
Score = 42 (19.8 bits), Expect = 5.2e-09, Sum P(3) = 5.2e-09
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 3 DFQTSTHRANWIFTPQELIEK 23
+F S+H WI Q+L+++
Sbjct: 4 NFWQSSHYLQWILDKQDLLKE 24
>UNIPROTKB|E5RIH8 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] InterPro:IPR015429 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GO:GO:0016592 EMBL:AL137784 HGNC:HGNC:1581
IPI:IPI00979024 ProteinModelPortal:E5RIH8 SMR:E5RIH8
Ensembl:ENST00000484049 ArrayExpress:E5RIH8 Bgee:E5RIH8
Uniprot:E5RIH8
Length = 114
Score = 115 (45.5 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 83
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 84 VLMAPTCVFLASKVEE 99
Score = 42 (19.8 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 3 DFQTSTHRANWIFTPQELIEK 23
+F S+H WI Q+L+++
Sbjct: 4 NFWQSSHYLQWILDKQDLLKE 24
>UNIPROTKB|Q5JV82 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 EMBL:AL137784 UniGene:Hs.430646
UniGene:Hs.633351 HGNC:HGNC:1581 IPI:IPI00552945 SMR:Q5JV82
STRING:Q5JV82 Ensembl:ENST00000482541 UCSC:uc003pqf.3
HOVERGEN:HBG056332 Uniprot:Q5JV82
Length = 143
Score = 115 (45.5 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 83
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 84 VLMAPTCVFLASKVEE 99
Score = 42 (19.8 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 3 DFQTSTHRANWIFTPQELIEK 23
+F S+H WI Q+L+++
Sbjct: 4 NFWQSSHYLQWILDKQDLLKE 24
>UNIPROTKB|A4RD79 [details] [associations]
symbol:SSN8 "RNA polymerase II holoenzyme cyclin-like
subunit" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR015429 InterPro:IPR023598
PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355 EMBL:CM001235
GO:GO:0006351 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PROSITE:PS00292 eggNOG:COG5333 KO:K15161
PANTHER:PTHR10026 OrthoDB:EOG4BZRBH RefSeq:XP_003717868.1
ProteinModelPortal:A4RD79 STRING:A4RD79 EnsemblFungi:MGG_01071T0
GeneID:2674146 KEGG:mgr:MGG_01071 Uniprot:A4RD79
Length = 363
Score = 135 (52.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 50/153 (32%), Positives = 72/153 (47%)
Query: 104 ATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEEN--HVSAEEL-GKGI------SQ 154
ATA +Y KRFY + + +P +++T VY ACK+EE H+ L K + S
Sbjct: 70 ATAQVYMKRFYTRVEIRSTNPTLVLVTAVYLACKMEEMPLHIRNVSLEAKKVWPMETPSL 129
Query: 155 DHQMILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLE 214
+ I E + + LIV+ PYR L +DF Q+ D H A
Sbjct: 130 EIAKIGECEFWLISEMSAQLIVHQPYRTLTAL---QQDF--------QLANDDHVLAVSF 178
Query: 215 VDKIMLTDAPLLFPPGQV-LSVIQLALAALRNS 246
++ +TD PLL+ P + L+ I LAL LR S
Sbjct: 179 LNDHFMTDLPLLYAPHTIALAAIMLALV-LRLS 210
Score = 61 (26.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 2 ADFQTSTHRANWIFTPQEL 20
A+F ST R NW+FT +EL
Sbjct: 3 ANFWESTQRRNWLFTKEEL 21
>UNIPROTKB|F1LNZ0 [details] [associations]
symbol:Ccnc "Cyclin-C" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758 RGD:70905
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PANTHER:PTHR10026 OMA:FFANVIQ GO:GO:0016592
IPI:IPI00190351 Ensembl:ENSRNOT00000043469 ArrayExpress:F1LNZ0
Uniprot:F1LNZ0
Length = 333
Score = 115 (45.5 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 74 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 133
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 134 VLMAPTCVFLASKVEE 149
Score = 74 (31.1 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 159 ILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKI 218
IL E + + ++ LIVY PYRPL ++ DM G+ +L L A V+
Sbjct: 185 ILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDVLLPL---AWRIVNDT 233
Query: 219 MLTDAPLLFPPGQV-LSVIQLA 239
TD LL+PP + L+ + +A
Sbjct: 234 YRTDLCLLYPPFMIALACLHVA 255
Score = 42 (19.8 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 3 DFQTSTHRANWIFTPQELIEK 23
+F S+H WI Q+L+++
Sbjct: 54 NFWQSSHYLQWILDKQDLLKE 74
>UNIPROTKB|Q91031 [details] [associations]
symbol:CCNC "Cyclin C" species:9031 "Gallus gallus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0016592 "mediator complex" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
HOGENOM:HOG000008007 PANTHER:PTHR10026 GeneTree:ENSGT00690000101911
HOVERGEN:HBG050836 OrthoDB:EOG4G1MGX GO:GO:0016592 UniGene:Gga.9076
EMBL:AADN02002249 EMBL:U40875 EMBL:U40876 EMBL:U40877 EMBL:U40886
EMBL:U40879 EMBL:U40880 EMBL:U40881 EMBL:U40882 EMBL:U40883
EMBL:U40884 EMBL:U40885 IPI:IPI00820099 STRING:Q91031
Ensembl:ENSGALT00000037233 InParanoid:Q91031 Uniprot:Q91031
Length = 272
Score = 115 (45.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 13 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 72
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 73 VLMAPTCVFLASKVEE 88
Score = 78 (32.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 28/82 (34%), Positives = 41/82 (50%)
Query: 159 ILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKI 218
IL E + + ++ LIVY PYRPL ++ DM G+ ML L A V+
Sbjct: 124 ILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWRIVNDT 172
Query: 219 MLTDAPLLFPPGQV-LSVIQLA 239
TD LL+PP + L+ + +A
Sbjct: 173 YRTDLCLLYPPFMIALACLHVA 194
>UNIPROTKB|Q90695 [details] [associations]
symbol:CCNC "Cyclin C" species:9031 "Gallus gallus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SUPFAM:SSF47954
PANTHER:PTHR10026 HSSP:P51946 GeneTree:ENSGT00690000101911
EMBL:AADN02002249 EMBL:U40874 IPI:IPI00574105 STRING:Q90695
Ensembl:ENSGALT00000031692 HOGENOM:HOG000151057 Uniprot:Q90695
Length = 105
Score = 112 (44.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 24 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 83
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+E+
Sbjct: 84 VLMAPTCVFLASKVED 99
Score = 42 (19.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 3 DFQTSTHRANWIFTPQELIEK 23
+F S+H WI Q+L+++
Sbjct: 4 NFWQSSHYLQWILDKQDLLKE 24
>UNIPROTKB|F1PGM0 [details] [associations]
symbol:CCNC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0016591 "DNA-directed RNA polymerase II,
holoenzyme" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0016591 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 OMA:FFANVIQ EMBL:AAEX03008558
EMBL:AAEX03008559 Ensembl:ENSCAFT00000005668 Uniprot:F1PGM0
Length = 284
Score = 115 (45.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 25 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 84
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 85 VLMAPTCVFLASKVEE 100
Score = 78 (32.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 28/82 (34%), Positives = 41/82 (50%)
Query: 159 ILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKI 218
IL E + + ++ LIVY PYRPL ++ DM G+ ML L A V+
Sbjct: 136 ILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWRIVNDT 184
Query: 219 MLTDAPLLFPPGQV-LSVIQLA 239
TD LL+PP + L+ + +A
Sbjct: 185 YRTDLCLLYPPFMIALACLHVA 206
>ZFIN|ZDB-GENE-030131-7369 [details] [associations]
symbol:ccnc "cyclin C" species:7955 "Danio rerio"
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
ZFIN:ZDB-GENE-030131-7369 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
eggNOG:COG5333 HOGENOM:HOG000008007 KO:K15161 PANTHER:PTHR10026
CTD:892 HOVERGEN:HBG050836 OrthoDB:EOG4G1MGX EMBL:BC060903
EMBL:AY398320 EMBL:AY450302 IPI:IPI00497140 RefSeq:NP_956245.1
UniGene:Dr.151536 STRING:Q6STL0 GeneID:335429 KEGG:dre:335429
InParanoid:Q6STL0 NextBio:20810840 Uniprot:Q6STL0
Length = 283
Score = 114 (45.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 24 ERQKDLKFLTEEEYWKLQIFFANVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 83
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 84 VLMAPTCVFLASKVEE 99
Score = 78 (32.5 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 28/82 (34%), Positives = 41/82 (50%)
Query: 159 ILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKI 218
IL E + + ++ LIVY PYRPL ++ DM G+ ML L A V+
Sbjct: 135 ILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWRIVNDT 183
Query: 219 MLTDAPLLFPPGQV-LSVIQLA 239
TD LL+PP + L+ + +A
Sbjct: 184 YRTDLCLLYPPFMIALACLHVA 205
>RGD|70905 [details] [associations]
symbol:Ccnc "cyclin C" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein serine/threonine
kinase activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell cycle"
evidence=TAS] [GO:0016591 "DNA-directed RNA polymerase II,
holoenzyme" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA;ISO] [GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758 RGD:70905
GO:GO:0000079 GO:GO:0006355 GO:GO:0006351 GO:GO:0007049
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007
PANTHER:PTHR10026 HOVERGEN:HBG050836 OrthoDB:EOG4G1MGX GO:GO:0016592
EMBL:D14013 IPI:IPI00199131 UniGene:Rn.106758
ProteinModelPortal:P39947 STRING:P39947 UCSC:RGD:70905
InParanoid:P39947 ArrayExpress:P39947 Genevestigator:P39947
GermOnline:ENSRNOG00000007719 Uniprot:P39947
Length = 278
Score = 116 (45.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 63 NSEKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEH 122
+ E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+
Sbjct: 17 DKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSI 76
Query: 123 HPKNIMLTCVYAACKIEE 140
P + TCV+ A K+EE
Sbjct: 77 DPVLMAPTCVFLASKVEE 94
Score = 74 (31.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 159 ILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKI 218
IL E + + ++ LIVY PYRPL ++ DM G+ +L L A V+
Sbjct: 130 ILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDVLLPL---AWRIVNDT 178
Query: 219 MLTDAPLLFPPGQV-LSVIQLA 239
TD LL+PP + L+ + +A
Sbjct: 179 YRTDLCLLYPPFMIALACLHVA 200
>UNIPROTKB|P39947 [details] [associations]
symbol:Ccnc "Cyclin-C" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758 RGD:70905
GO:GO:0000079 GO:GO:0006355 GO:GO:0006351 GO:GO:0007049
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007
PANTHER:PTHR10026 HOVERGEN:HBG050836 OrthoDB:EOG4G1MGX
GO:GO:0016592 EMBL:D14013 IPI:IPI00199131 UniGene:Rn.106758
ProteinModelPortal:P39947 STRING:P39947 UCSC:RGD:70905
InParanoid:P39947 ArrayExpress:P39947 Genevestigator:P39947
GermOnline:ENSRNOG00000007719 Uniprot:P39947
Length = 278
Score = 116 (45.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 63 NSEKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEH 122
+ E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+
Sbjct: 17 DKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSI 76
Query: 123 HPKNIMLTCVYAACKIEE 140
P + TCV+ A K+EE
Sbjct: 77 DPVLMAPTCVFLASKVEE 94
Score = 74 (31.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 159 ILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKI 218
IL E + + ++ LIVY PYRPL ++ DM G+ +L L A V+
Sbjct: 130 ILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDVLLPL---AWRIVNDT 178
Query: 219 MLTDAPLLFPPGQV-LSVIQLA 239
TD LL+PP + L+ + +A
Sbjct: 179 YRTDLCLLYPPFMIALACLHVA 200
>ASPGD|ASPL0000048419 [details] [associations]
symbol:AN2172 species:162425 "Emericella nidulans"
[GO:0016592 "mediator complex" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0010673 "positive regulation of transcription from RNA
polymerase II promoter during meiosis" evidence=IEA] [GO:0000411
"positive regulation of transcription by galactose" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
EMBL:BN001307 GO:GO:0006351 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PROSITE:PS00292 eggNOG:COG5333 KO:K15161
PANTHER:PTHR10026 HSSP:O94503 EMBL:AACD01000034 OrthoDB:EOG4BZRBH
RefSeq:XP_659776.1 ProteinModelPortal:Q5BBA8 STRING:Q5BBA8
GeneID:2875644 KEGG:ani:AN2172.2 HOGENOM:HOG000217621
Uniprot:Q5BBA8
Length = 302
Score = 124 (48.7 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 46/191 (24%), Positives = 88/191 (46%)
Query: 61 KDNSEKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVM 120
KD + P P +++ + +++ +L ++ + ATA +Y KR+Y + +
Sbjct: 31 KDKASHTHFPLP----DQRLLNIYFNQQLIKLGKRMSTRQQALATAQVYIKRYYTKNEIR 86
Query: 121 EHHPKNIMLTCVYAACKIEE--NHV-----SAEELG-KGISQDHQMILNYEMIVYQALEF 172
+P ++ T Y ACK+EE H+ A L + I D + E + ++
Sbjct: 87 NTNPYLVLTTAFYLACKMEECPQHIRFVVSEARALWPEFIVPDVSKVGECEFSLISEMQA 146
Query: 173 DLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQV 232
LIV+ PYR L ++++ EL + D A ++ LTD LL+PP +
Sbjct: 147 QLIVHHPYRTL----SELQP-------ELSLTSDEVALAWSVINDHYLTDLSLLYPP-HI 194
Query: 233 LSVIQLALAAL 243
++V+ + +A +
Sbjct: 195 IAVMAIIVAVV 205
Score = 52 (23.4 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 2 ADFQTSTHRANWIFTPQELIE 22
A++ ST R +W+FT + L E
Sbjct: 3 ANYWASTQRKHWLFTRERLAE 23
>SGD|S000004970 [details] [associations]
symbol:SSN8 "Cyclin-like component of the RNA polymerase II
holoenzyme" species:4932 "Saccharomyces cerevisiae" [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IDA]
[GO:0010673 "positive regulation of transcription from RNA
polymerase II promoter during meiosis" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=ISS;IMP;IPI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000411 "positive regulation of transcription by galactose"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
SGD:S000004970 GO:GO:0000079 EMBL:BK006947 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 GO:GO:0010673 GO:GO:0016538 PROSITE:PS00292
eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 GO:GO:0016592 GO:GO:0000411
EMBL:Z71301 OrthoDB:EOG4BZRBH HOGENOM:HOG000217621 EMBL:U20221
EMBL:U16248 EMBL:U20635 PIR:S59373 RefSeq:NP_014373.3
RefSeq:NP_014379.3 ProteinModelPortal:P47821 SMR:P47821
DIP:DIP-2007N IntAct:P47821 MINT:MINT-385997 STRING:P47821
EnsemblFungi:YNL025C GeneID:855706 GeneID:855712 KEGG:sce:YNL019C
KEGG:sce:YNL025C CYGD:YNL025c OMA:KVEECPQ NextBio:980046
Genevestigator:P47821 GermOnline:YNL025C Uniprot:P47821
Length = 323
Score = 138 (53.6 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 58/241 (24%), Positives = 111/241 (46%)
Query: 4 FQTSTHRANWIFTPQELIEKYKASNRRAIQTLEKYGTTQ-MEVDVDGSFSYPEPQNNAKD 62
F TST R +W +T L A R+ + LE Q + + +D + E Q+ K+
Sbjct: 5 FWTSTQRHHWQYTKASL-----AKERQKLWLLECQLFPQGLNIVMDSKQNGIE-QSITKN 58
Query: 63 NSEKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEH 122
H + L+ +++ ++R++ + ++ ATA +Y RF ++ SV E
Sbjct: 59 IPITH---RDLHYDKDYNLRIYCYFLIMKLGRRLNIRQYALATAHIYLSRFLIKASVREI 115
Query: 123 HPKNIMLTCVYAACKIEE--NHV-----SAEELG-KGISQDHQMILNYEMIVYQALEFDL 174
+ ++ TCVY ACK+EE ++ A L + I D + +E + + LE L
Sbjct: 116 NLYMLVTTCVYLACKVEECPQYIRTLVSEARTLWPEFIPPDPTKVTEFEFYLLEELESYL 175
Query: 175 IVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQVLS 234
IV+ PY+ L+ + ++ ++ + D + ++ + D LL+PP +++
Sbjct: 176 IVHHPYQSLKQIVQVLKQ----PPFQITLSSDDLQNCWSLINDSYINDVHLLYPP-HIIA 230
Query: 235 V 235
V
Sbjct: 231 V 231
>CGD|CAL0004675 [details] [associations]
symbol:SSN8 species:5476 "Candida albicans" [GO:0031505
"fungal-type cell wall organization" evidence=IMP] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0010673
"positive regulation of transcription from RNA polymerase II
promoter during meiosis" evidence=IEA] [GO:0000411 "positive
regulation of transcription by galactose" evidence=IEA]
InterPro:IPR015429 CGD:CAL0004675 GO:GO:0005634 GO:GO:0000079
GO:GO:0006355 GO:GO:0006351 GO:GO:0031505 EMBL:AACQ01000066
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PROSITE:PS00292
eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026 HSSP:O94503
RefSeq:XP_716596.1 ProteinModelPortal:Q5A4H9 STRING:Q5A4H9
GeneID:3641718 KEGG:cal:CaO19.7355 Uniprot:Q5A4H9
Length = 434
Score = 137 (53.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 46/196 (23%), Positives = 95/196 (48%)
Query: 74 NIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVY 133
NI + +MR++ N L ++ ATA +Y RF + S+ E + ++ TC+Y
Sbjct: 46 NIIYDYNMRIYLHNLLIKLGRRLNIRQIALATAEIYLTRFLTRVSLKEINVYLLITTCIY 105
Query: 134 AACKIEE--NHV-----SAEELG-KGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEG 185
ACKIEE H+ A + + I D + +E + + ++ L+++ PY+ L
Sbjct: 106 VACKIEECPQHIRLILSEARNIWPEYIPHDVTKLAEFEFYLIEEMDSYLLLHHPYKSLMQ 165
Query: 186 FINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQV-LSVIQLALAALR 244
+ + V +L + ++L L ++ +TD LL PP + ++ I + + +
Sbjct: 166 INEFLSNNYNVFGFKLTV-EELQNAWSL-INDSYITDLHLLLPPHTIAVAAIYITVVLKK 223
Query: 245 NSNKVQRVVNYESYLS 260
N ++V++ N ++ ++
Sbjct: 224 NLSRVRQGNNNDNNIN 239
Score = 40 (19.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 2 ADFQTSTHRANWIFTPQELIEKYKASNRRAIQTLEK 37
AD+ S+ R W T L+E RR + LE+
Sbjct: 3 ADYWNSSQRNQWQLTRFSLLEA-----RRRVLLLER 33
>UNIPROTKB|Q5A4H9 [details] [associations]
symbol:SSN8 "RNA polymerase II holoenzyme cyclin-like
subunit" species:237561 "Candida albicans SC5314" [GO:0031505
"fungal-type cell wall organization" evidence=IMP]
InterPro:IPR015429 CGD:CAL0004675 GO:GO:0005634 GO:GO:0000079
GO:GO:0006355 GO:GO:0006351 GO:GO:0031505 EMBL:AACQ01000066
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PROSITE:PS00292
eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026 HSSP:O94503
RefSeq:XP_716596.1 ProteinModelPortal:Q5A4H9 STRING:Q5A4H9
GeneID:3641718 KEGG:cal:CaO19.7355 Uniprot:Q5A4H9
Length = 434
Score = 137 (53.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 46/196 (23%), Positives = 95/196 (48%)
Query: 74 NIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCVY 133
NI + +MR++ N L ++ ATA +Y RF + S+ E + ++ TC+Y
Sbjct: 46 NIIYDYNMRIYLHNLLIKLGRRLNIRQIALATAEIYLTRFLTRVSLKEINVYLLITTCIY 105
Query: 134 AACKIEE--NHV-----SAEELG-KGISQDHQMILNYEMIVYQALEFDLIVYPPYRPLEG 185
ACKIEE H+ A + + I D + +E + + ++ L+++ PY+ L
Sbjct: 106 VACKIEECPQHIRLILSEARNIWPEYIPHDVTKLAEFEFYLIEEMDSYLLLHHPYKSLMQ 165
Query: 186 FINDMEDFCQVKNGELQMLKDLHETAKLEVDKIMLTDAPLLFPPGQV-LSVIQLALAALR 244
+ + V +L + ++L L ++ +TD LL PP + ++ I + + +
Sbjct: 166 INEFLSNNYNVFGFKLTV-EELQNAWSL-INDSYITDLHLLLPPHTIAVAAIYITVVLKK 223
Query: 245 NSNKVQRVVNYESYLS 260
N ++V++ N ++ ++
Sbjct: 224 NLSRVRQGNNNDNNIN 239
Score = 40 (19.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 2 ADFQTSTHRANWIFTPQELIEKYKASNRRAIQTLEK 37
AD+ S+ R W T L+E RR + LE+
Sbjct: 3 ADYWNSSQRNQWQLTRFSLLEA-----RRRVLLLER 33
>UNIPROTKB|J9NXY6 [details] [associations]
symbol:CCNC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 EMBL:AAEX03008558 EMBL:AAEX03008559
Ensembl:ENSCAFT00000047644 Uniprot:J9NXY6
Length = 148
Score = 115 (45.5 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 19 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 78
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 79 VLMAPTCVFLASKVEE 94
>WB|WBGene00000506 [details] [associations]
symbol:cic-1 species:6239 "Caenorhabditis elegans"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
GO:GO:0007275 GO:GO:0000079 GO:GO:0006355 GO:GO:0006351
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007 KO:K15161
PANTHER:PTHR10026 GeneTree:ENSGT00690000101911 OMA:FFANVIQ
EMBL:FO081521 PIR:T33884 RefSeq:NP_497548.2
ProteinModelPortal:Q9TYP2 SMR:Q9TYP2 EnsemblMetazoa:H14E04.5
GeneID:175357 KEGG:cel:CELE_H14E04.5 UCSC:H14E04.5 CTD:175357
WormBase:H14E04.5 InParanoid:Q9TYP2 NextBio:887802 Uniprot:Q9TYP2
Length = 302
Score = 127 (49.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 51/173 (29%), Positives = 85/173 (49%)
Query: 71 KPLNIEEEQSMRVFYENKLREVCS--AFYFPN---KIQ----ATALLYFKRFYLQWSVME 121
K N EE + +F+ N + V + A N K++ ATA++YFKRFYL+ S +
Sbjct: 30 KIYNEEEYNRLNIFWANFITAVATEGAHSQANVGCKLRQQVIATAIIYFKRFYLRQSFRD 89
Query: 122 HHPKNIMLTCVYAACKIEEN---HVS------AEELGK--GI-----SQDHQMILNYEMI 165
P + T ++ ACK+EE+ VS A L K G+ S + ++ + E I
Sbjct: 90 MCPFLVASTALFLACKVEEHTTLSVSSFLKNTAIVLPKRWGVTFETTSTKNGVVYDSEFI 149
Query: 166 VYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKI 218
+ + L+ L+V+ RP+ + D++ F Q Q +KDL E + + K+
Sbjct: 150 LVEILDCCLVVHHASRPMFELLEDLKQFTQQSTIANQPIKDL-EAIEAQCQKV 201
Score = 44 (20.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 3 DFQTSTHRANWIFTPQELIEKYKASNRRAIQTLEKY 38
+F S+H WIF E I K +A + + I E+Y
Sbjct: 4 NFWKSSHCQQWIFDKTE-IWKQRAEDMK-IYNEEEY 37
>UNIPROTKB|H0YBQ5 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PANTHER:PTHR10026 EMBL:AL137784 HGNC:HGNC:1581
Ensembl:ENST00000486428 Bgee:H0YBQ5 Uniprot:H0YBQ5
Length = 228
Score = 92 (37.4 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 101 KIQATALLYFKRFYLQWSVMEHHPKNIMLTCVYAACKIEE 140
++ ATA +YFKRFY ++S+ P + TCV+ A K+EE
Sbjct: 6 QVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEE 45
Score = 78 (32.5 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 28/82 (34%), Positives = 41/82 (50%)
Query: 159 ILNYEMIVYQALEFDLIVYPPYRPLEGFINDMEDFCQVKNGELQMLKDLHETAKLEVDKI 218
IL E + + ++ LIVY PYRPL ++ DM G+ ML L A V+
Sbjct: 81 ILECEFYLLELMDCCLIVYHPYRPLLQYVQDM--------GQEDMLLPL---AWRIVNDT 129
Query: 219 MLTDAPLLFPPGQV-LSVIQLA 239
TD LL+PP + L+ + +A
Sbjct: 130 YRTDLCLLYPPFMIALACLHVA 151
>UNIPROTKB|Q788V6 [details] [associations]
symbol:CCNC "Cyclin-C" species:9031 "Gallus gallus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SUPFAM:SSF47954
PANTHER:PTHR10026 GeneTree:ENSGT00690000101911 EMBL:AADN02002249
EMBL:U40878 EMBL:U40875 EMBL:U40876 EMBL:U40877 IPI:IPI00823364
STRING:Q788V6 Ensembl:ENSGALT00000037232 Uniprot:Q788V6
Length = 94
Score = 112 (44.5 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 13 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 72
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+E+
Sbjct: 73 VLMAPTCVFLASKVED 88
>UNIPROTKB|Q29AI1 [details] [associations]
symbol:CycC "Cyclin-C" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0001104 "RNA polymerase II
transcription cofactor activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0016592 "mediator complex" evidence=ISS]
InterPro:IPR004367 InterPro:IPR015429 InterPro:IPR023598
Pfam:PF02984 PIRSF:PIRSF028758 GO:GO:0000079 EMBL:CM000070
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GenomeReviews:CM000070_GR GO:GO:0016591 PROSITE:PS00292
eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026 OMA:FFANVIQ
GO:GO:0016592 OrthoDB:EOG4GF1X0 GO:GO:0001104 RefSeq:XP_001358231.1
ProteinModelPortal:Q29AI1 GeneID:4801070 KEGG:dpo:Dpse_GA20234
FlyBase:FBgn0080229 InParanoid:Q29AI1 Uniprot:Q29AI1
Length = 267
Score = 123 (48.4 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 53/194 (27%), Positives = 89/194 (45%)
Query: 73 LNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCV 132
LN +E Q + +F+ N ++ + ++ ATA +YFKRFY + S+ P + TC+
Sbjct: 32 LNEDEYQKVFIFFANVIQVLGEQLKLRQQVIATATVYFKRFYARNSLKNIDPLLLAPTCI 91
Query: 133 YAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRP-----LEGFI 187
A K+EE V + + IS I Y EF PYR E ++
Sbjct: 92 LLASKVEEFGVISNS--RLISICQSAIKTKFSYAYTQ-EF------PYRTNHILECEFYL 142
Query: 188 NDMEDFC----QVKNGELQMLKDLHETAKLE------VDKIMLTDAPLLFPPGQV-LSVI 236
+ D C Q LQ+++D+ + +L V+ + TD LL+PP Q+ ++ +
Sbjct: 143 LENLDCCLIVYQPYRPLLQLVQDMGQEDQLLTLSWRIVNDSLRTDVCLLYPPYQIAIACL 202
Query: 237 QLALAALRNSNKVQ 250
Q+A L+ + Q
Sbjct: 203 QIACVILQKDSTKQ 216
Score = 42 (19.8 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 3 DFQTSTHRANWIFTPQELIEK 23
+F S+H WI Q+L+ +
Sbjct: 4 NFWQSSHSQQWILDKQDLLRE 24
>FB|FBgn0004597 [details] [associations]
symbol:CycC "Cyclin C" species:7227 "Drosophila melanogaster"
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=ISS;NAS;IDA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=NAS] [GO:0019908
"nuclear cyclin-dependent protein kinase holoenzyme complex"
evidence=NAS] [GO:0016592 "mediator complex" evidence=ISS;IPI]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISS] [GO:0001104 "RNA polymerase II
transcription cofactor activity" evidence=ISS;IMP] [GO:0000079
"regulation of cyclin-dependent protein serine/threonine kinase
activity" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0016591 "DNA-directed RNA polymerase II,
holoenzyme" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0036011 "imaginal disc-derived leg segmentation"
evidence=IMP] [GO:0022416 "chaeta development" evidence=IMP]
[GO:0045498 "sex comb development" evidence=IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] InterPro:IPR004367 InterPro:IPR015429
InterPro:IPR023598 Pfam:PF02984 PIRSF:PIRSF028758 EMBL:AE014297
GO:GO:0007095 GO:GO:0000079 GO:GO:0022416 GO:GO:0006367
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0036011
GO:GO:0016591 GO:GO:0045498 GO:GO:0016538 PROSITE:PS00292
eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 OMA:FFANVIQ GO:GO:0016592 EMBL:X62948
EMBL:M74906 EMBL:AY061425 PIR:A40269 RefSeq:NP_476848.1
UniGene:Dm.20187 ProteinModelPortal:P25008 SMR:P25008
DIP:DIP-17706N IntAct:P25008 MINT:MINT-280784 STRING:P25008
PaxDb:P25008 PRIDE:P25008 EnsemblMetazoa:FBtr0083010 GeneID:41801
KEGG:dme:Dmel_CG7281 CTD:41801 FlyBase:FBgn0004597
InParanoid:P25008 OrthoDB:EOG4GF1X0 PhylomeDB:P25008
GenomeRNAi:41801 NextBio:825634 Bgee:P25008 GermOnline:CG7281
GO:GO:0001104 Uniprot:P25008
Length = 267
Score = 124 (48.7 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 53/188 (28%), Positives = 88/188 (46%)
Query: 73 LNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHPKNIMLTCV 132
LN +E Q + +F+ N ++ + ++ ATA +YFKRFY + S+ P + TC+
Sbjct: 32 LNEDEYQKVFIFFANVIQVLGEQLKLRQQVIATATVYFKRFYARNSLKNIDPLLLAPTCI 91
Query: 133 YAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQALEFDLIVYPPYRP-----LEGFI 187
A K+EE V + + IS I Y A EF PYR E ++
Sbjct: 92 LLASKVEEFGVISNS--RLISICQSAIKTKFSYAY-AQEF------PYRTNHILECEFYL 142
Query: 188 NDMEDFC----QVKNGELQMLKDLHETAKLE------VDKIMLTDAPLLFPPGQV-LSVI 236
+ D C Q LQ+++D+ + +L V+ + TD LL+PP Q+ ++ +
Sbjct: 143 LENLDCCLIVYQPYRPLLQLVQDMGQEDQLLTLSWRIVNDSLRTDVCLLYPPYQIAIACL 202
Query: 237 QLALAALR 244
Q+A L+
Sbjct: 203 QIACVILQ 210
>UNIPROTKB|E5RI39 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 EMBL:AL137784 HGNC:HGNC:1581
IPI:IPI00974477 ProteinModelPortal:E5RI39 SMR:E5RI39
Ensembl:ENST00000369217 ArrayExpress:E5RI39 Bgee:E5RI39
Uniprot:E5RI39
Length = 192
Score = 115 (45.5 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 EKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHHP 124
E+ K L+ EE +++F+ N ++ + ++ ATA +YFKRFY ++S+ P
Sbjct: 71 ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDP 130
Query: 125 KNIMLTCVYAACKIEE 140
+ TCV+ A K+EE
Sbjct: 131 VLMAPTCVFLASKVEE 146
>TAIR|locus:2008698 [details] [associations]
symbol:CYCT1;1 "cyclin T1;1" species:3702 "Arabidopsis
thaliana" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR015429
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0000079 GO:GO:0051301
GO:GO:0006355 GO:GO:0007049 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
EMBL:AC023064 PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
HOGENOM:HOG000220828 KO:K15188 IPI:IPI00532594 PIR:E86475
RefSeq:NP_174775.1 UniGene:At.65959 ProteinModelPortal:Q9C8P7
SMR:Q9C8P7 EnsemblPlants:AT1G35440.1 GeneID:840436
KEGG:ath:AT1G35440 GeneFarm:4111 TAIR:At1g35440 InParanoid:Q9C8P7
OMA:WNFANDS PhylomeDB:Q9C8P7 ProtClustDB:CLSN2914362
Genevestigator:Q9C8P7 Uniprot:Q9C8P7
Length = 247
Score = 116 (45.9 bits), Expect = 0.00016, P = 0.00016
Identities = 32/121 (26%), Positives = 64/121 (52%)
Query: 59 NAKDNSEKHS--RPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQ 116
N ++ EK S R +N++EE R Y + L+E+ P K ATA++ +RF+ +
Sbjct: 9 NTREAIEKTSPSRLDGINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFFTR 68
Query: 117 WSVMEHHPKNIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMI--VYQALEFDL 174
S+ ++ PK + + C++ A K+E S G + ++++ N E + V++ L+ +
Sbjct: 69 QSLTKNDPKTVAIICMFIAGKVEG---SPRPAGDVVFVSYRVLFNKEPLRDVFERLKMTV 125
Query: 175 I 175
+
Sbjct: 126 L 126
>TAIR|locus:2122975 [details] [associations]
symbol:CYCT1;4 species:3702 "Arabidopsis thaliana"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0009615 "response to
virus" evidence=IEP] [GO:0010090 "trichome morphogenesis"
evidence=IMP] [GO:0048366 "leaf development" evidence=IGI]
[GO:0000394 "RNA splicing, via endonucleolytic cleavage and
ligation" evidence=RCA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=RCA] [GO:0008284 "positive
regulation of cell proliferation" evidence=RCA] InterPro:IPR004367
InterPro:IPR015429 Pfam:PF02984 GO:GO:0005634 GO:GO:0000079
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0010090 GO:GO:0051301
GO:GO:0006355 GO:GO:0009615 GO:GO:0007049 GO:GO:0048366
EMBL:AL161551 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
HOGENOM:HOG000220828 KO:K15188 EMBL:AL021768 EMBL:AK117509
EMBL:BT029301 IPI:IPI00546432 PIR:T06153 RefSeq:NP_193695.2
UniGene:At.32800 ProteinModelPortal:Q8GYM6 SMR:Q8GYM6 STRING:Q8GYM6
PRIDE:Q8GYM6 EnsemblPlants:AT4G19600.1 GeneID:827702
KEGG:ath:AT4G19600 GeneFarm:4117 TAIR:At4g19600 InParanoid:Q8GYM6
OMA:IRQSHAR PhylomeDB:Q8GYM6 ProtClustDB:CLSN2679942
Genevestigator:Q8GYM6 Uniprot:Q8GYM6
Length = 541
Score = 83 (34.3 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 21/80 (26%), Positives = 43/80 (53%)
Query: 61 KDNSEKHSRPKPLNIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVM 120
++NS SR +++++E +R Y L+++ P ATA+++ RF+++ S
Sbjct: 41 EENSP--SRLDSIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHA 98
Query: 121 EHHPKNIMLTCVYAACKIEE 140
+ + I C++ A K+EE
Sbjct: 99 RNDRRTIATVCMFLAGKVEE 118
Score = 77 (32.2 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 154 QDHQMILNYEMIVYQALEFDLIVYPPYRPL 183
Q ++ILN E IV L FD VY PY+PL
Sbjct: 153 QQKELILNGEKIVLSTLGFDFNVYHPYKPL 182
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 337 322 0.00085 116 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 56
No. of states in DFA: 610 (65 KB)
Total size of DFA: 243 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.91u 0.37s 27.28t Elapsed: 00:00:01
Total cpu time: 26.91u 0.37s 27.28t Elapsed: 00:00:01
Start: Fri May 10 11:19:38 2013 End: Fri May 10 11:19:39 2013