BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038034
(422 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 280 bits (715), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/398 (43%), Positives = 234/398 (58%), Gaps = 57/398 (14%)
Query: 36 PNIAVVIGVLSIAFSLLFLVLAYAKFCQSNHSNFADGDP----HHRNLQELVRSRSRFSG 91
P++A++ GV SI F+L F++L YAK ++ + D D H R Q L SRFSG
Sbjct: 39 PSLAIITGVFSIVFTLTFVLLVYAKCFHNDLRSETDSDGERIRHDRLWQGLFNRSSRFSG 98
Query: 92 IDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLEG 151
+DK IESLP FRF++L+G K+GLEC+V LSKFED EILRLLPKCRHAFH+ CIDQWLE
Sbjct: 99 LDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQ 158
Query: 152 HASCPLCRYKFDGRDRGSF--SYSNSLRFLRIPSNLTEEPNLEIFVQREQ-SHQGSSRFN 208
HA+CPLCR + + D S + S SLR L E+ LEI+++RE+ ++ GSSRF
Sbjct: 159 HATCPLCRNRVNIEDDLSVLGNSSTSLRILNQSETREEDSRLEIYIEREEGTNDGSSRF- 217
Query: 209 LRSSFRKIELNKKQEELLIEGGNRSYGDQKLLHKFKHKIIVADVVIKNRWSDVNSSDLLS 268
SSFRKI K+ LL GN + ++KL+HKF H+I+V+D V KNRWS++ SSDL
Sbjct: 218 --SSFRKI---LKKSLLLEREGNENIDEKKLMHKFNHRIVVSDAVFKNRWSNITSSDLTF 272
Query: 269 LNSEMLSVMSINRFLPSNSKSGRFDNVFSVNDNMVKIKEDIERKRLYESRFSGIEKSHSV 328
L SEML+ +S S RF +V V+ ++ KED+E KR+
Sbjct: 273 LTSEMLNSVS----------SDRFSSVDRVHRGNLRDKEDMEMKRM-------------- 308
Query: 329 SGSSISSSYYNDENSSKLLNGTEKRSMSEITNFARFREFNISKKIRETSAGDE----SRK 384
++SS +R++SEIT +R + S + S +
Sbjct: 309 --------LIKHKDSS-------RRTVSEITTVSREKAVGGSYRGSTASTSQNYAVTATT 353
Query: 385 EERLRRVWLPMVQRTVQWFSGRERNFQELEHKRQDLNV 422
EER RR+WLP+ +RT QWF RE++ +L RQ+LNV
Sbjct: 354 EERRRRLWLPIARRTAQWFVNREKS-NDLNTTRQNLNV 390
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/439 (40%), Positives = 255/439 (58%), Gaps = 57/439 (12%)
Query: 10 IFFCFFFHVKAQETSNSEP-----DSLHPLHPNIAVVIGVLSIAFSLLFLVLAYAKFCQS 64
IFF F + + ++ + P D + P++AVV GVL+I F+L F++L YAK C
Sbjct: 4 IFFFFLPLLHSYASAQTPPPFRNGDLVANFEPSLAVVTGVLAIMFALTFVLLVYAKCC-- 61
Query: 65 NHSNFADGDPHHRNL-----QELVRSRS-----RFSGIDKAVIESLPLFRFASLRGSKEG 114
H + G R Q + +RS RFSG+DK IESLPLFRF++L+GSK+G
Sbjct: 62 -HIDLRSGSGDRRRHDRRLRQGIFFNRSTASSDRFSGLDKTAIESLPLFRFSALKGSKQG 120
Query: 115 LECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLEGHASCPLCRYKFD-GRDRGSFSYS 173
L+C+V LSKFE EILRLLPKCRHAFH+ CIDQWLE HA+CPLCR + D +
Sbjct: 121 LDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSVLTNG 180
Query: 174 NSLRFLRIPSNLTEEPN--------LEIFVQREQSHQGSSRFNLRSSFRKI-ELNKKQEE 224
NS RFL S + E+ + E + GSSRF++ SFRKI +L K++
Sbjct: 181 NSFRFLN-QSEIREDSSLELYIEREEEEERIHREELSGSSRFSIGESFRKILKLGNKEKT 239
Query: 225 LLIEGGNRSYGDQKLLHKFKHKIIVADVVIKNRWSDVNSSDLLSLNSEMLSVMSINRF-- 282
LL E N ++KL+HKF H+I+V+DVV KNRWS+V+SSDL+ LNSEM++ +S RF
Sbjct: 240 LLDEHVN-DKDEKKLMHKFNHRIVVSDVVFKNRWSNVSSSDLMFLNSEMVNSISSERFSS 298
Query: 283 LPSNSKSGRFDNVFSVNDNMVKIKEDIERKRLYESRFSGIEKSHSVSGSSISSSYYNDEN 342
L + D + +++IKE++E KR+ E++ + + +++ SS D
Sbjct: 299 LDHVKRGDEEDQI-----GILRIKEEMEAKRMLENKLTSM--------TTMFSSENGDSG 345
Query: 343 SS--KLLNGTEKRSMSEITNFARFR---EFNISKKIRETSA-----GDESRKEERLRRVW 392
S ++ +RS+S+IT R + S ET++ G+E+ EER RR+W
Sbjct: 346 SKSRSVMIEPGRRSVSDITAVPRLSISIHGDCSGSAAETASALQNGGNET--EERRRRLW 403
Query: 393 LPMVQRTVQWFSGRERNFQ 411
LP+ ++T QWF+ RE+ Q
Sbjct: 404 LPIARKTAQWFANREKRSQ 422
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 148 bits (373), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 173/332 (52%), Gaps = 57/332 (17%)
Query: 34 LHPNIAVVIGVLSIAFSLLFLVLAYAKFCQSNHSNFADGDPHHRNLQELVRSRS------ 87
L P IAVVI VL+ FSL FL+L Y K C+ + + P +
Sbjct: 54 LMPGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVV 113
Query: 88 ---RFSGIDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSC 144
+ SGID++VIESLP+FRF +L G K+GLECAV L++FE TE+LRLLPKC+HAFH+ C
Sbjct: 114 GGRKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVEC 173
Query: 145 IDQWLEGHASCPLCRYKFDGRDRGSFSYSNS---LRFLRIPSNLT--EEPNLEIFV---- 195
+D WL+ H++CPLCRY+ D D NS L+F + SN P L F+
Sbjct: 174 VDTWLDAHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKDESNSVNNNPPGLTRFIPVSR 233
Query: 196 ---QREQSHQGSSRFN-LRS---------SFRK-----IELN----KKQEELLIEGGNRS 233
+ + + +SR N +R+ SFR+ +++N +K E + + +R
Sbjct: 234 ISGRHSSAGERASRLNEIRTSSSYKSNPMSFRRSLDSSLKVNDAGEEKSESVAVNCLDRL 293
Query: 234 YGDQKLL---------HKFKHKIIVADVVIKN-RWSDVNSSDLLSLNSEMLSVMSINRFL 283
LL +F+H+II++ + RWS+V SDLL L SEM ++S R L
Sbjct: 294 QRKDGLLLIPNRESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEM--ILSDCRKL 351
Query: 284 PSNSKSGRFDNVFSVNDNMVKIKEDIERKRLY 315
+ ++ GR +N V IER+R +
Sbjct: 352 AA-AEGGR----DVINGRSVSELTGIERRRRW 378
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 86/140 (61%), Gaps = 16/140 (11%)
Query: 34 LHPNIAVVIGVLSIAF---SLL-FLVLAYAKFCQSNHSN----------FADGDPHHRNL 79
+ P I +I +LS+ F S+L LV Y K +SN S+ F+D D + R L
Sbjct: 49 ISPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQL 108
Query: 80 QELVRSRSRFSGIDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHA 139
Q+L SG+D+A+I++LP+F + ++G+KE +CAV L +F + + LRLLP C HA
Sbjct: 109 QQLFHLHD--SGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHA 166
Query: 140 FHMSCIDQWLEGHASCPLCR 159
FH+ CID WL +++CPLCR
Sbjct: 167 FHIDCIDTWLLSNSTCPLCR 186
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 20 AQETSNSEPDSLHPLHPNIAVVIGVLSIAFSLLFLVLAYAKFCQSNHSNFADGDPHHRNL 79
AQ S S PD P+ V VL F L L+ Y + C SN + RN
Sbjct: 28 AQSFSPSPPDLQTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHCA--RSNPDSSTRYFRNR 85
Query: 80 QELVRSRSRFSGIDKAVIESLPLFRFASLRGSKEG---LECAVYLSKFEDTEILRLLPKC 136
SR G+D AV+ES P+F ++S++ SK G LECA+ L++ ED E +RLLP C
Sbjct: 86 AN--DGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPIC 143
Query: 137 RHAFHMSCIDQWLEGHASCPLCRYKFDGR 165
H FH+ CID WL HA+CP+CR +
Sbjct: 144 NHLFHIDCIDTWLYSHATCPVCRSNLTAK 172
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Query: 36 PNIAVVIGVLSIAFSLLFLVLAYAKFCQSNHSNFADGDPHHRNLQELVRSRSRFSGIDKA 95
P +A+++ VL F L Y + C G+P+ L +R + G+D +
Sbjct: 61 PTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAG-NWLATNRQQARGLDAS 119
Query: 96 VIESLPLFRFAS---LRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLEGH 152
+IE+ P F++++ LR KE LEC+V L++FED E LRL+PKC H FH CID WL H
Sbjct: 120 IIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSH 179
Query: 153 ASCPLCR 159
+CPLCR
Sbjct: 180 TTCPLCR 186
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 12/173 (6%)
Query: 8 IVIFFCFFFHVKAQETSNSEPDSLHPLHPN--IAVVIGVL--SIAFSLLFLVLAYAKFCQ 63
++ V Q + PN AV+I +L ++ FS+L + Y
Sbjct: 14 VIFLLLLVLQVSGQHQPRTTAPPYIAQRPNQVPAVIIAMLMFTLLFSMLACCVCYKYTNT 73
Query: 64 SNHSNFADGDPHHRNLQELVRSRSRFSGIDKAVIESLPLFRFASLRG---SKEGLECAVY 120
S H +D + R SR G+ K VI S P F ++ ++G K G+ECA+
Sbjct: 74 SPHGTSSDTEEGGHGEVAFTRRTSR--GLGKDVINSFPSFLYSQVKGLKIGKGGVECAIC 131
Query: 121 LSKFEDTEILRLLPKCRHAFHMSCIDQWLEGHASCPLCRYKF---DGRDRGSF 170
L++FED E LRL+P C HAFH SCID WL ++CP+CR G D+ S
Sbjct: 132 LNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPKPGSDQNSL 184
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 87/173 (50%), Gaps = 23/173 (13%)
Query: 1 MSQFCVLIVIFFCFFFHV-----KAQETSNSEPDSLHPLHPNIAVVIGVLSIAFSLLFLV 55
M+ VL ++F ++Q ++P + L P +AV++ +L A +
Sbjct: 7 MAFAGVLPIVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFF 66
Query: 56 LAYAKFCQSNHSNFADGDPHHRNLQELVRSRSRFS------GIDKAVIESLPLFRFASLR 109
Y + C S D + +RSR + G+D +V+E+ P F ++ ++
Sbjct: 67 SIYFRHC----SGVPDA-----GVSPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVK 117
Query: 110 GSKEG---LECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLEGHASCPLCR 159
K G LECA+ L++FED E LRLLPKC H FH CID WLE H +CP+CR
Sbjct: 118 TQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCR 170
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 38/229 (16%)
Query: 40 VVIGVLSIAFSLLFLVLAYAKFCQSNHSNFADGDPH-HRNLQELVRSRSRFS----GIDK 94
+IG+L+ A L+ +K+C +H + + + N + S R S G+++
Sbjct: 60 ALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNE 119
Query: 95 AVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLEGHAS 154
++I+S+ ++++ S G +G +C+V LS+FE+ E LRLLPKC HAFH+ CID WL+ H++
Sbjct: 120 SMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSN 179
Query: 155 CPLCRYKFDGRDRGSFSYSNSLRFLRIPSNLTEEPNLEIFVQREQSHQGSSRFNLRSSFR 214
CPLCR G + + S ++ + + Q +HQ S
Sbjct: 180 CPLCRAFVTGVNNPTASVGQNVSVV-------------VANQSNSAHQ-------TGSVS 219
Query: 215 KIELNKKQEELLIEGGNRSYGDQKLLHKFKHKIIVADVVIKNRWSDVNS 263
+I LN + G GD F +++ D+ I +R SD S
Sbjct: 220 EINLN-------LAGYESQTGD------FDSVVVIEDLEIGSRNSDARS 255
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 80/136 (58%), Gaps = 17/136 (12%)
Query: 36 PNIAVVIGVLSIAFSLLFLVLAYAKFCQSNHSNFA--------DGDPHHRNLQELVRSRS 87
PN VV+ V+++ F ++F ++ + FC+ +++ F+ D D ++VR R
Sbjct: 47 PNDPVVV-VITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAE----SQVVRIRR 101
Query: 88 RFS-GIDKAVIESLPLFRFA---SLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMS 143
+ G+D IE+ P F ++ ++R K G+ECAV L +FED E LRL+P C H FH
Sbjct: 102 LTARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHAD 161
Query: 144 CIDQWLEGHASCPLCR 159
C+D WL H++CPLCR
Sbjct: 162 CVDVWLSEHSTCPLCR 177
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 36 PNIAVVIGVLSIAFSLLFLVLAYAKFCQSNHSNFADGDPHHRNLQELVRSRSRFSGIDKA 95
P A+++ VL F L + Y + C + G L VR + G+D +
Sbjct: 37 PTTAIIMIVLVSVFFALGCISVYMRRCLQHALGMDSGGGPGNWLN--VRQTTE-PGLDAS 93
Query: 96 VIESLPLFRFAS---LRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLEGH 152
VIE+ P F +++ LR KE LEC V L++FED E LRL+P+C H FH CID WL
Sbjct: 94 VIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQ 153
Query: 153 ASCPLCR 159
+CPLCR
Sbjct: 154 TTCPLCR 160
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
Query: 80 QELVRSRSRFSGIDKAVIESLPLFRFASLRG---SKEGLECAVYLSKFEDTEILRLLPKC 136
Q+++ SR+R G++K VIES P F ++ ++G K G+ECA+ LS+FED E LR +P C
Sbjct: 84 QDVLHSRAR-RGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPC 142
Query: 137 RHAFHMSCIDQWLEGHASCPLCRYKFDGRDRGSFSYSN 174
H FH +CID WL ++CP+CR + S+ Y N
Sbjct: 143 SHTFHANCIDVWLSSWSTCPVCRANLSLKPGESYPYLN 180
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 14/143 (9%)
Query: 33 PLHPNIAVVIGVLSIAFSLLFLVLAYAKFCQSNHSNFADGDPHHRNLQELVRSRSRFSGI 92
P IA+++ + I+ S++ L H F + + QE+ SR+R G+
Sbjct: 47 PTETVIAIIVLAIFISLSMVACFL---------HKTFYRAEVEAAS-QEVFHSRAR-RGL 95
Query: 93 DKAVIESLPLFRFASLRG---SKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWL 149
+K ++ES P+F ++ ++G K G+ECA+ LS+F D E LR +P C H FH +CID WL
Sbjct: 96 EKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWL 155
Query: 150 EGHASCPLCRYKFDGRDRGSFSY 172
++CP CR + S+ Y
Sbjct: 156 SSQSTCPACRANLSLKPGESYPY 178
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 90 SGIDKAVIESLPLFRFASLRGSKE-GLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQW 148
SG+D++ I++LP+F + S+ G K +CAV L +FE + LRLLPKC HAFHM CID W
Sbjct: 106 SGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTW 165
Query: 149 LEGHASCPLCR 159
L H++CPLCR
Sbjct: 166 LLSHSTCPLCR 176
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 91 GIDKAVIESLPLFRFASLRGSKEG---LECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQ 147
G+D IE+ P F ++ ++ K G LECA+ L++FED E LRLLPKC H FH CI
Sbjct: 95 GLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGA 154
Query: 148 WLEGHASCPLCR 159
WL+GH +CP+CR
Sbjct: 155 WLQGHVTCPVCR 166
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 90 SGIDKAVIESLPLFRFASLRGSK-EGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQW 148
SG+D+++I++LP+F + S+ G K +C V L +FE + LRLLPKC HAFH+ CID W
Sbjct: 98 SGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTW 157
Query: 149 LEGHASCPLCR 159
L H++CPLCR
Sbjct: 158 LLSHSTCPLCR 168
>sp|Q9FIR0|ATL30_ARATH RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2
SV=1
Length = 289
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 12/154 (7%)
Query: 21 QETSNSEPDSLHPLHPNIAVVIGVLSIAFSLLFLVLAYAK-----FCQSNHSNFADGDPH 75
Q T+ P + P + ++ +L + F + F + + K ++ + ++ +G P
Sbjct: 9 QNTTVPYPPQHYSKPPLVIILTVILLVVFFIGFFAIYFCKCFYHTLTEAWNHHYHNGLPE 68
Query: 76 HR--NLQELVRSRSRFSGIDKAVIESLPLFRFAS---LRGSKEGLECAVYLSKFEDTEIL 130
++ QE V+ G++ +I+S PLF F+S LR K GLECA+ L +FE+ IL
Sbjct: 69 NQIQAQQEPVQPPVN-PGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHIL 127
Query: 131 -RLLPKCRHAFHMSCIDQWLEGHASCPLCRYKFD 163
RLL C H FH CIDQWLE + +CP+CR D
Sbjct: 128 LRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLD 161
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 16/131 (12%)
Query: 81 ELVRSRSRFSGIDKAVIESLPLFRFASLRGSK---EGLECAVYLSKFEDTEILRLLPKCR 137
E++ SR R GIDK VIES P F ++ ++ K G+ECA+ L +FED E LR +P C
Sbjct: 82 EVLHSRVR-RGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCS 140
Query: 138 HAFHMSCIDQWLEGHASCPLCRYKFDGRDRGSFSYSNSLRFLRIPSNLTEEPNLEIFVQR 197
H FH +CID+WL ++CP+CR + SF + PS E N + VQ
Sbjct: 141 HTFHANCIDEWLSSRSTCPVCRANLSLKSGDSFPH---------PSMDVETGNAQRGVQE 191
Query: 198 ---EQSHQGSS 205
E+S GSS
Sbjct: 192 SPDERSLTGSS 202
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 32/153 (20%)
Query: 36 PNIAV-VIGVLSIAFSLLFLVLAYAKFCQSNH-----SNFA-------DGDPHHRNLQEL 82
P +AV VIG+L+ AF L+ + K C + H F+ D DP EL
Sbjct: 35 PILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDPLMVYSPEL 94
Query: 83 VRSRSRFSGIDKAVIESLPLFRFASLRGSKEGL--------------ECAVYLSKFEDTE 128
RSR G+D++VI ++P+F+F +G+ EC+V LS+F+D E
Sbjct: 95 ---RSR--GLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEE 149
Query: 129 ILRLLPKCRHAFHMSCIDQWLEGHASCPLCRYK 161
LR++P C H FH+ CID WL+ +A+CPLCR +
Sbjct: 150 KLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTR 182
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 113/251 (45%), Gaps = 60/251 (23%)
Query: 36 PNIAV-VIGVLSIAFSLLFLVLAYAKFC--------------QSNHSNFADGDPHHRNLQ 80
P +A+ VIG+L+ AF L+ + K C S+ + PH N
Sbjct: 42 PILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPHEVN-- 99
Query: 81 ELVRSRSRFSGIDKAVIESLPLFRFAS---LRG----SKEGLECAVYLSKFEDTEILRLL 133
G+D++ I ++P+F+F + G SK EC+V L++F++ E LR++
Sbjct: 100 ---------RGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRII 150
Query: 134 PKCRHAFHMSCIDQWLEGHASCPLCRYKFDGRDRGSFSYSNSLRFLRIPSNLTE------ 187
P C H FH+ CID WL+G+A+CPLCR S S +L + PS+ E
Sbjct: 151 PNCCHVFHIDCIDIWLQGNANCPLCRTSV------SCEASFTLDLISAPSSPRENSPHSR 204
Query: 188 ----EPNLEI-----FVQREQSHQGSSRFNLRSSFRKIELNKKQEELL---IEGGNRSYG 235
EP L + FV E G+S N R S R I+ +QE + + GN
Sbjct: 205 NRNLEPGLVLGGDDDFVVIE---LGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKS 261
Query: 236 DQKLLHKFKHK 246
L KF ++
Sbjct: 262 VSPLPIKFGNR 272
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 91 GIDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLE 150
G+D VI+SLP+F F+ K+ +ECAV LS+FE++E R+LP C+H FH+ CID W
Sbjct: 94 GLDPNVIKSLPVFTFSD-ETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFH 152
Query: 151 GHASCPLCR 159
H++CPLCR
Sbjct: 153 SHSTCPLCR 161
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 23/147 (15%)
Query: 34 LHPNIAVVIGVLSIAF---SLLFLV----LAYAKFCQSNHSN----FADGDPHHRNLQEL 82
+ P + VI +L++ F LL L+ + + S+ SN + D R LQ+L
Sbjct: 41 ISPAVLFVIVILAVLFFISGLLHLLVRFLIKHPSATASSRSNRFPEISTSDALQRQLQQL 100
Query: 83 VRSRSRFSGIDKAVIESLPLFRFASL----------RGSKEGLECAVYLSKFEDTEILRL 132
SG+D+A I++LP+F + + ++E +CAV L +F + + LRL
Sbjct: 101 FHLND--SGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRL 158
Query: 133 LPKCRHAFHMSCIDQWLEGHASCPLCR 159
LP C HAFH++CID WL+ +++CPLCR
Sbjct: 159 LPMCSHAFHLNCIDTWLQSNSTCPLCR 185
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 14/143 (9%)
Query: 34 LHPNIAVVIGVLSIAFSLLFLVLAYAKFCQSNHSNFADGD------------PHHRNLQE 81
L P + + G+ + AF L +K+C ++ +N A + P + +
Sbjct: 58 LSPLVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDD 117
Query: 82 LVRSRSRFSGIDKAVIESLPLFRFASLRGS--KEGLECAVYLSKFEDTEILRLLPKCRHA 139
S +G+D +I+ + F+ + G +C++ L +F + E LRLLPKC H
Sbjct: 118 PFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHT 177
Query: 140 FHMSCIDQWLEGHASCPLCRYKF 162
FH+ CID+WL+ H++CPLCR K
Sbjct: 178 FHVVCIDRWLKSHSNCPLCRAKI 200
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 53/68 (77%)
Query: 92 IDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLEG 151
+D+++I+S+ ++++ + G E +C+V LS+F++ E LRLLPKC HAFH+ CID WL+
Sbjct: 134 LDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKS 193
Query: 152 HASCPLCR 159
H++CPLCR
Sbjct: 194 HSNCPLCR 201
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 38 IAVVIGVLSIAFSLLFLVLAYAKFCQS----NHSNF-ADGDPHHRNLQELVRSRS----- 87
I + VL+I + FLV + F S N + +D + + ++E + R
Sbjct: 86 ITITGAVLAILLTGFFLVAKF--FSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVDHP 143
Query: 88 ----RFSGIDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMS 143
R +G+ +++I S+ + + G E +C V L++FE+ E LRLLPKC HAFH+S
Sbjct: 144 IWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHIS 203
Query: 144 CIDQWLEGHASCPLCR 159
CID WL H +CPLCR
Sbjct: 204 CIDTWLSSHTNCPLCR 219
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 41 VIGVLSIAFSLLFLVLAYAKFCQSNHSNFADGDPHHRNLQELVRSRSRFSGIDKAVIESL 100
++G+ S+ F + + Q + + F D D R VR G+D+A+I S
Sbjct: 27 IVGLASVCFRWT----SRQFYSQESINPFTDSDVESRTSITAVR------GLDEAIINSF 76
Query: 101 PLFRFASLRGSK---EGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLEGHASCPL 157
P F ++ ++ + G+ECAV + +FED E LRL+P+C H FH C+ WL H++CPL
Sbjct: 77 PTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPL 136
Query: 158 CRYKF 162
CR
Sbjct: 137 CRVDL 141
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 90 SGIDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWL 149
+G+D +I S P+F ++S G ECA+ LS+F D + +RL+ CRH FH +CID W
Sbjct: 76 TGLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWF 135
Query: 150 EGHASCPLCRYKFDGRDRGS 169
E H +CP+CR + D GS
Sbjct: 136 ELHKTCPVCRCELDPGMIGS 155
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 90 SGIDKAVIESLPLFRFASLRGSKE-GLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQW 148
SG+D+ I++LP+F + ++ S E +CAV L++F DT+ LRLLP C HAFH+ CID W
Sbjct: 179 SGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTW 238
Query: 149 LEGHASCPLCR 159
L +++CPLCR
Sbjct: 239 LLSNSTCPLCR 249
>sp|O49691|ATL29_ARATH RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=3
SV=1
Length = 289
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 12/148 (8%)
Query: 26 SEPDSLHPLHPNIAVVIGVLSIAFSLLFLVLAYAKFCQSNHSNFAD-------GDPHHRN 78
+P H + P + V++ V+ + F + Y FC+ GD N
Sbjct: 11 PQPPQQHYVTPPLTVILTVILLVFFFIGFFTLY--FCKCFLDTMVQAWRLHHGGDTVSDN 68
Query: 79 LQELVRSRSRFSGIDKAVIESLPLFRFAS---LRGSKEGLECAVYLSKFEDTEILRLLPK 135
+ + G++ +I S P F ++S LR K GLECA+ L +F+ +LRLL
Sbjct: 69 PLQQPEAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTT 128
Query: 136 CRHAFHMSCIDQWLEGHASCPLCRYKFD 163
C H FH CID W E H +CP+CR D
Sbjct: 129 CYHVFHQECIDLWFESHRTCPVCRRDLD 156
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 9/132 (6%)
Query: 36 PNIAVVIGVLSIAFSLLFLVLAYAKFC---QSNHSNFADGDPHHRNLQELVRSRSRF--- 89
P + + I +LSI F + L+ KF Q+ + DG + R ++RF
Sbjct: 34 PIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITESSTALQ-GRYQTRFNLH 92
Query: 90 -SGIDKAVIESLPLFRFASLRGSKEGL-ECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQ 147
+ ID++ I++LPL + ++ G + L +CAV L +F + LRLLPKC HAFH+ CID
Sbjct: 93 DAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDT 152
Query: 148 WLEGHASCPLCR 159
WL +++CPLCR
Sbjct: 153 WLLTNSTCPLCR 164
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%)
Query: 91 GIDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLE 150
G+ ++ I S+ + F G +G EC+V L++FE+ E LRLLPKC HAFH++CID WL
Sbjct: 109 GLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLL 168
Query: 151 GHASCPLCR 159
H +CPLCR
Sbjct: 169 SHKNCPLCR 177
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 91 GIDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLE 150
G++ ++I+SLP+F F+++ + +EC+V LS+F+D E R++P C+H FH+ CID W
Sbjct: 51 GLNPSIIKSLPIFTFSAVT-ALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFH 109
Query: 151 GHASCPLCRYKFD 163
H+SCPLCR + +
Sbjct: 110 SHSSCPLCRSQIE 122
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 4 FCVLIVIFFCFFFHVKAQE---TSNSEPDSLHPL-HPNIAVVIGVLSIAFSLLFLVLAYA 59
C + +C+F S DS P+ P + +IGVL+ AF L+ +
Sbjct: 21 LCSMYCPQWCYFIFPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFIS 80
Query: 60 KFCQSNHS------------NFADGDPHHRNLQELVRSRSR-------FSGIDKAVIESL 100
K+C + S G +SRS SG+D+ +I +
Sbjct: 81 KYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPPSGLDETLINKI 140
Query: 101 PLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLEGHASCPLCR 159
+ ++ G +C+V L +F D E LRLLP+C HAFH CID WL+ H++CPLCR
Sbjct: 141 TVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCR 199
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 58 YAKFCQSNHSNFADGDPHHRNLQELVRSRSRFSGIDKAVIESLPLFRFASLRGSKEGLEC 117
YAKF S F D L V S+ G+D VI SLP F ++ G EC
Sbjct: 49 YAKFVLHRRSAFQD-------LSFSVVSQPPKRGLDSLVIASLPTF-VVGIKNDVAGTEC 100
Query: 118 AVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLEGHASCPLCR 159
AV LS E+ + R+LP C+H FH+SC+D WL ++CP+CR
Sbjct: 101 AVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCR 142
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 79.7 bits (195), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 91 GIDKAVIESLPLFRFASLRGSKEG---LECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQ 147
G+D I+S P F + RG + G LEC V L++F+D E LRL+P C H FH C+D
Sbjct: 56 GLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDI 115
Query: 148 WLEGHASCPLCRYK 161
WL ++CP+CR K
Sbjct: 116 WLSHSSTCPICRAK 129
>sp|Q9LQM2|ATL81_ARATH RING-H2 finger protein ATL81 OS=Arabidopsis thaliana GN=ATL81 PE=2
SV=1
Length = 332
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 91 GIDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLE 150
G+D +IES P + ++ + +C++ L++F D + +RL+ C H+FH CID W E
Sbjct: 130 GLDSKIIESFPEYPYSVKDHGTD--QCSICLTEFMDDDTIRLISTCNHSFHTICIDLWFE 187
Query: 151 GHASCPLCRYKFDGRDRGSF 170
GH +CP+CR + D DR S
Sbjct: 188 GHKTCPVCRRELDVEDRTSL 207
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 90 SGIDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWL 149
+G+D +++S+ + F K+GLECAV LS D + R+LP+C H FH+ CID W
Sbjct: 94 AGLDSKILQSIHVVVFK-CTDFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWF 152
Query: 150 EGHASCPLCR 159
+ H++CPLCR
Sbjct: 153 QSHSTCPLCR 162
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 95 AVIESLPLFRFASLR---GSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLEG 151
+V++SLP+F+F+S+ S +CAV LSKFE + LRLLP C HAFH CID WL
Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVS 151
Query: 152 HASCPLCR 159
+ +CPLCR
Sbjct: 152 NQTCPLCR 159
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 10/84 (11%)
Query: 91 GIDKAVIESLPLFRFASLRGSKEGL----------ECAVYLSKFEDTEILRLLPKCRHAF 140
G+D +VI++LPLF +++ + + +CAV L +FE+ + +R LP C HAF
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 141 HMSCIDQWLEGHASCPLCRYKFDG 164
H+ CID+WL H +CPLCR G
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAILG 203
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 90 SGIDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWL 149
+G+ + SLP+ F K+GLEC++ LS+ + RLLPKC H+FH+ CID W
Sbjct: 101 TGLTSFELSSLPIVFFRQ-DSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWF 159
Query: 150 EGHASCPLCRYKFDGRDRGSFSYSNSLRFLRIPSN 184
+ H++CP+CR G ++ S S R ++P N
Sbjct: 160 QSHSTCPICRNTVLGPEQAS-----SKRVEQVPDN 189
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 36 PNIAVVIGVLSIAFSLLFLVLAYAKFCQSNHSNFADGDPH--------HRNLQELVRSRS 87
P VV+ L AF LL + C A P H+ + +
Sbjct: 45 PTTVVVLVALITAFVLLTVFSVLINRCAQ-----ARAPPRRAFRSTASHQPVGGAAAASR 99
Query: 88 RFSGIDKAVIESLPLFRFASLRG---SKEG-LECAVYLSKFEDTEILRLLPKCRHAFHMS 143
G+DK V+E+ P + ++ +K G LECAV L++F D++ LR+LP C H FH
Sbjct: 100 ASRGLDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPD 159
Query: 144 CIDQWLEGHASCPLCR 159
CID WL +CPLCR
Sbjct: 160 CIDPWLAAAVTCPLCR 175
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 90 SGIDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWL 149
+G+ K ++ P+ + S ECA+ L +F D E +R+LP C H+FHMSCID WL
Sbjct: 78 AGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWL 137
Query: 150 EGHASCPLCRYKF 162
H+SCP CR+
Sbjct: 138 VSHSSCPNCRHSL 150
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 17/153 (11%)
Query: 14 FFFHVKAQETSNSEPDSLHPLHPNIAVVIGVLSIAFSLLFLVLAYAK------FCQSNHS 67
F + + S S ++ P + ++ +++ VL A + + ++A ++ N S
Sbjct: 4 LLFRLLQEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRS 63
Query: 68 NFADGDPHHRNLQELVRSRSRFSGIDKAVIESLPLFRFASLRGSKEGL-ECAVYLSKFED 126
+ P V + ++ G+ K V+ SLP ++ E L ECA+ L++F
Sbjct: 64 DQTHPPP--------VAAANK--GLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAA 113
Query: 127 TEILRLLPKCRHAFHMSCIDQWLEGHASCPLCR 159
+ LR+LP+C H FH+SCID WL H+SCP CR
Sbjct: 114 GDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCR 146
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 38 IAVVIGVLSIAFSLLFLVLAYAKFCQSNHSNFADGDPH-HRNLQELVRSRSRFSGIDKAV 96
+A + GV+ I F+L YA+F G P R+ E+ + G++ V
Sbjct: 36 VASLSGVILIVFALHL----YARFVLRRRREAFRGLPVIFRHPFEMPKR-----GLNPTV 86
Query: 97 IESLPLFRFASLRG-SKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLEGHASC 155
I SLP F + G + ECAV LS ++ + R LP C+H FH+ C+D WL ++C
Sbjct: 87 IASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTC 146
Query: 156 PLCRYKFDGRDR 167
P+CR + + R R
Sbjct: 147 PVCRTEVEPRPR 158
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 91 GIDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLE 150
G+D + SLP++R+ + +C + LS FE+ E ++++P C H FH+ C+D WL
Sbjct: 115 GLDSQAVRSLPVYRYTKA-AKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLS 173
Query: 151 GHASCPLCRYK--FDGRDRG 168
+ +CPLCR F +D G
Sbjct: 174 SYVTCPLCRSNQLFSDKDLG 193
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 92 IDKAVIESLPLFRFA----------SLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFH 141
+D V+ SLP+ ++ +G+ECAV L++ ED E R LP+C H FH
Sbjct: 99 VDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFH 158
Query: 142 MSCIDQWLEGHASCPLCR 159
C+D WL H++CPLCR
Sbjct: 159 AECVDMWLGSHSTCPLCR 176
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 91 GIDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLE 150
G+ KA IE LP +RF E C V + FE ++LR+LP C H FH C+D+WL+
Sbjct: 440 GLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLK 498
Query: 151 GHASCPLCR 159
G+ +CP+CR
Sbjct: 499 GNRTCPICR 507
>sp|Q9C7E9|ATL20_ARATH RING-H2 finger protein ATL20 OS=Arabidopsis thaliana GN=ATL20 PE=2
SV=2
Length = 299
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 31 LHPLHPNIAVVIGVLSIAFSLLFLVLAYAKFCQSNHSNFADGDPHHRNLQELVRSRSRFS 90
L PL + ++ G+ + + + + +F N A RN + R +
Sbjct: 169 LRPLIITLCIIGGITATCIAAI-RIYNSERFVNQRRQNAAI---TARNTTQQPRGVVVTT 224
Query: 91 GIDKAVIESLPLFRFASLR--GSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQW 148
G+D++ IES R G+ C + LS++ E +R +P+C H FH+ CID+W
Sbjct: 225 GLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEW 284
Query: 149 LEGHASCPLCR 159
L+ H+SCP+CR
Sbjct: 285 LKIHSSCPVCR 295
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 91 GIDKAVIESLPLFRFASLRGSKEGL-ECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWL 149
G+ K V++SLP F+ E ECA+ L++F + LR+LP+C H FH++CID WL
Sbjct: 84 GLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWL 143
Query: 150 EGHASCPLCR 159
H+SCP CR
Sbjct: 144 GSHSSCPSCR 153
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 92 IDKAVIESLPLFRFASLRGSKEGLECAVYLSKFEDTEILRLLPKCRHAFHMSCIDQWLEG 151
+D V+E +P+F ++ EC+V LS+FE+ + R+LPKC H FH+ CID W
Sbjct: 88 LDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRS 147
Query: 152 HASCPLCR 159
+SCPLCR
Sbjct: 148 RSSCPLCR 155
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 149,348,069
Number of Sequences: 539616
Number of extensions: 6057373
Number of successful extensions: 17911
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 17451
Number of HSP's gapped (non-prelim): 503
length of query: 422
length of database: 191,569,459
effective HSP length: 120
effective length of query: 302
effective length of database: 126,815,539
effective search space: 38298292778
effective search space used: 38298292778
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)