BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038042
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LD40|CNG13_ARATH Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis
thaliana GN=CNGC13 PE=3 SV=2
Length = 696
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSF 90
+F+ +DE L+A+ D LK V YTE S + EG VE+M F++RGK+ S T T F F
Sbjct: 474 LFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGF-F 532
Query: 91 NAS--NDGHFCGEELLPRASVLQLGG-LPISTRTVIAHTPVEAFVIEADDWKQLVNSF-M 146
NA FCGE+LL A Q PISTRTV A T VEAF + ADD K + + F
Sbjct: 533 NAVYLKPSDFCGEDLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLVASQFRR 592
Query: 147 LPDDQLPYIFRL 158
L QL + FR
Sbjct: 593 LHSKQLQHTFRF 604
>sp|O65717|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana
GN=CNGC1 PE=1 SV=1
Length = 716
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSF 90
+F+++DE L+A+ D L+ V YTE S +V EG V++M FI+RGK+ + T T F
Sbjct: 486 MFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGRTGF-L 544
Query: 91 NAS--NDGHFCGEELL-----PRASVLQLGGLPISTRTVIAHTPVEAFVIEADDWKQLVN 143
N+ G FCGEELL P +S LPISTRTV A VEAF ++ADD K + +
Sbjct: 545 NSEYLGAGDFCGEELLTWALDPHSS----SNLPISTRTVRALMEVEAFALKADDLKFVAS 600
Query: 144 SF-MLPDDQLPYIFR 157
F L QL + FR
Sbjct: 601 QFRRLHSKQLRHTFR 615
>sp|Q9LNJ0|CNG10_ARATH Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis
thaliana GN=CNGC10 PE=2 SV=2
Length = 711
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 77/132 (58%), Gaps = 5/132 (3%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSF 90
+F+ +DE L+A+ D L+ V YTE S ++ EG V +M F++RG++ S T + F F
Sbjct: 473 LFEIMDEQLLDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGF-F 531
Query: 91 NASN--DGHFCGEELLPRASVLQLGG-LPISTRTVIAHTPVEAFVIEADDWKQLVNSF-M 146
NA N FCGE+LLP A Q PISTRTV A T VEAF + A+D K + + F
Sbjct: 532 NAVNLKASDFCGEDLLPWALDPQSSSHFPISTRTVQALTEVEAFALTAEDLKSVASQFRR 591
Query: 147 LPDDQLPYIFRL 158
L QL + FR
Sbjct: 592 LHSKQLQHTFRF 603
>sp|Q9M0A4|CNGC9_ARATH Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis
thaliana GN=CNGC9 PE=1 SV=1
Length = 733
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 76/132 (57%), Gaps = 5/132 (3%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSF 90
+F+ +DE L+A+ + LK YTE S LV EG V +M FI+RG++ S T + F F
Sbjct: 513 LFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGF-F 571
Query: 91 NAS--NDGHFCGEELLPRASVLQLGG-LPISTRTVIAHTPVEAFVIEADDWKQLVNSF-M 146
N S +G FCGEELL A + G LP STRT A T VEAF + AD+ K + + F
Sbjct: 572 NRSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTAKALTEVEAFALIADELKFVASQFRR 631
Query: 147 LPDDQLPYIFRL 158
L Q+ + FR
Sbjct: 632 LHSRQVQHTFRF 643
>sp|O82226|CNGC6_ARATH Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis
thaliana GN=CNGC6 PE=1 SV=2
Length = 747
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 5/132 (3%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSF 90
+F+ +DE L+A+ + LK +TE+S LV EG V +M FI+RG++ S T + F +
Sbjct: 514 LFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGF-Y 572
Query: 91 NAS--NDGHFCGEELLPRASVLQLGG-LPISTRTVIAHTPVEAFVIEADDWKQLVNSF-M 146
N S +G FCG+ELL A + G LP STRTV A T VEAF + AD+ K + + F
Sbjct: 573 NRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQFRR 632
Query: 147 LPDDQLPYIFRL 158
L Q+ + FR
Sbjct: 633 LHSRQVQHTFRF 644
>sp|Q9FXH6|CNGC8_ARATH Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis
thaliana GN=CNGC8 PE=3 SV=2
Length = 753
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTT-IRTTTFS 89
+F +DE L+A+ + LK YTE + +V EG V +M FI+RG++ S T R+ F+
Sbjct: 508 LFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFN 567
Query: 90 FNASNDGHFCGEELLPRASVLQLGG-LPISTRTVIAHTPVEAFVIEADDWKQLVNSF-ML 147
+G FCGEELL A + G LP STRTV A T VEAF +EA++ K + + F L
Sbjct: 568 RGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQFRRL 627
Query: 148 PDDQLPYIFRL 158
Q+ FR
Sbjct: 628 HSRQVQQTFRF 638
>sp|Q9S9N5|CNGC7_ARATH Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis
thaliana GN=CNGC7 PE=2 SV=1
Length = 738
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTT-IRTTTFS 89
+F +DE L+A+ + LK +TE + +V EG V +M FI+RG++ S T R+ F+
Sbjct: 502 LFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVTTDGGRSGFFN 561
Query: 90 FNASNDGHFCGEELLPRASVLQLGG-LPISTRTVIAHTPVEAFVIEADDWKQLVNSF-ML 147
+G FCGEELL A + G LP STRTV A T VEAF +EA++ K + + F L
Sbjct: 562 RGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQFRRL 621
Query: 148 PDDQLPYIFRL 158
Q+ FR
Sbjct: 622 HSRQVQQTFRF 632
>sp|Q9SL29|CNG15_ARATH Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis
thaliana GN=CNGC15 PE=3 SV=1
Length = 678
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 76/136 (55%), Gaps = 13/136 (9%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSF 90
+FD++DE L+A+ + LK TE + LV EG V +M FI+RG + S T T F F
Sbjct: 471 LFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGF-F 529
Query: 91 NAS--NDGHFCGEELL-----PRASVLQLGGLPISTRTVIAHTPVEAFVIEADDWKQLVN 143
N+ G FCGEELL PR V+ LP STRTV A VEAF ++A+D + + +
Sbjct: 530 NSCLIGPGDFCGEELLTWALDPRPVVI----LPSSTRTVKAICEVEAFALKAEDLQFVAS 585
Query: 144 SF-MLPDDQLPYIFRL 158
F L QL + FR
Sbjct: 586 QFRRLHTKQLRHKFRF 601
>sp|Q9SKD6|CNG11_ARATH Cyclic nucleotide-gated ion channel 11 OS=Arabidopsis thaliana
GN=CNGC11 PE=2 SV=2
Length = 621
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 35 IDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSFNASN 94
+D+ L+A+ LK V YTE+S +V EG VE M FI+RG + S T T F FN+ +
Sbjct: 439 MDDQLLDALCARLKTVHYTEKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGF-FNSVD 497
Query: 95 --DGHFCGEELLPRASVLQLGGLPISTRTVIAHTPVEAFVIEADDWKQLVNSF-MLPDDQ 151
G CG +LL A PIS+RTV A T VE FVI ADD K + + L Q
Sbjct: 498 LIAGDSCG-DLLTWALYSLSSQFPISSRTVQALTEVEGFVISADDLKFVATQYRRLHSKQ 556
Query: 152 LPYIFRL 158
L ++FR
Sbjct: 557 LQHMFRF 563
>sp|Q9SKD7|CNGC3_ARATH Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis
thaliana GN=CNGC3 PE=2 SV=2
Length = 706
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 32 FDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSFN 91
F +D+ L+A+ LK V YTE+S +V EG VE M FI+RG + S T T F FN
Sbjct: 478 FQAMDDRLLDALCARLKTVLYTEKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGF-FN 536
Query: 92 ASN--DGHFCGEELLPRASVLQLGGLPISTRTVIAHTPVEAFVIEADDWKQLVNSF-MLP 148
+ + G FCG +LL A PIS+RTV A T VE F++ ADD K + + L
Sbjct: 537 SVDLVAGDFCG-DLLTWALDPLSSQFPISSRTVQALTEVEGFLLSADDLKFVATQYRRLH 595
Query: 149 DDQLPYIFRL 158
QL ++FR
Sbjct: 596 SKQLRHMFRF 605
>sp|Q8RWS9|CNGC5_ARATH Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis
thaliana GN=CNGC5 PE=2 SV=1
Length = 717
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 76/132 (57%), Gaps = 5/132 (3%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSF 90
+F +D+ L+A+ LK +TE + LV EG V++M FI+RG++ S T + F F
Sbjct: 498 LFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVTTDGGRSGF-F 556
Query: 91 NAS--NDGHFCGEELLPRASVLQLG-GLPISTRTVIAHTPVEAFVIEADDWKQLVNSF-M 146
N S +G FCGEELL A + G LP STRTV A T VEAF + +++ K + + F
Sbjct: 557 NRSLLKEGEFCGEELLTWALDPKSGVNLPSSTRTVKALTEVEAFALTSEELKFVASQFRR 616
Query: 147 LPDDQLPYIFRL 158
L Q+ + FR
Sbjct: 617 LHSRQVQHTFRF 628
>sp|Q9SJA4|CNG14_ARATH Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis
thaliana GN=CNGC14 PE=2 SV=2
Length = 726
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 74/134 (55%), Gaps = 11/134 (8%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTT-IRTTTFS 89
+F ++D+ L+A+ + L T+ + +V EG V +M FI+RGK+ S T RT F+
Sbjct: 481 LFAQMDDQLLDAICERLASSLSTQGNYIVREGDPVTEMLFIIRGKLESSTTNGGRTGFFN 540
Query: 90 FNASNDGHFCGEE-----LLPRASVLQLGGLPISTRTVIAHTPVEAFVIEADDWKQLVNS 144
G FCGEE LLP+++V LP STRTV A VEAF ++A D K + N
Sbjct: 541 SITLRPGDFCGEELLAWALLPKSTV----NLPSSTRTVRALEEVEAFALQAGDLKFVANQ 596
Query: 145 F-MLPDDQLPYIFR 157
F L +L + FR
Sbjct: 597 FRRLHSKKLQHTFR 610
>sp|Q8L7Z0|CNG17_ARATH Probable cyclic nucleotide-gated ion channel 17 OS=Arabidopsis
thaliana GN=CNGC17 PE=2 SV=1
Length = 720
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 32 FDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSFN 91
F ++D+ L+A+ + L TE + LV EG + +M FI+RG++ S T T F FN
Sbjct: 482 FSQMDDQLLDAICERLVSSLCTEGTYLVREGDLISEMLFIIRGRLESSTTNGGRTGF-FN 540
Query: 92 AS--NDGHFCGEE-----LLPRASVLQLGGLPISTRTVIAHTPVEAFVIEADDWKQLVNS 144
+ G FCGEE LLP++++ LP STRTV A VEAF + A+D K + N
Sbjct: 541 SIILRPGDFCGEELLSWALLPKSTL----NLPSSTRTVRALVEVEAFALRAEDLKFVANQ 596
Query: 145 F-MLPDDQLPYIFRL 158
F L +L + FR
Sbjct: 597 FRRLHSKKLQHTFRF 611
>sp|Q9SU64|CNG16_ARATH Probable cyclic nucleotide-gated ion channel 16 OS=Arabidopsis
thaliana GN=CNGC16 PE=2 SV=1
Length = 705
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 7/131 (5%)
Query: 32 FDRIDEHFLNAMLDLLKLVPY--TERSILVHEGSGVEKMFFIVRGKIWSEPTTI-RTTTF 88
F ++D+ L+A+ + +LVP T+ + ++ EG V +M FI+RG++ S T R+ F
Sbjct: 458 FAQMDDQLLDAICE--RLVPSLNTKDTYVIREGDPVNEMLFIIRGQMESSTTDGGRSGFF 515
Query: 89 SFNASNDGHFCGEELLPRASVLQLG-GLPISTRTVIAHTPVEAFVIEADDWKQLVNSF-M 146
+ G FCGEELL A V + LP+STRTV + VEAF + A+D K + N F
Sbjct: 516 NSITLRPGDFCGEELLTWALVPNINHNLPLSTRTVRTLSEVEAFALRAEDLKFVANQFRR 575
Query: 147 LPDDQLPYIFR 157
L +L + FR
Sbjct: 576 LHSKKLQHAFR 586
>sp|Q9LEQ3|CNG18_ARATH Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis
thaliana GN=CNGC18 PE=3 SV=1
Length = 706
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 11/133 (8%)
Query: 32 FDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSFN 91
F ++D+ L+A+ L T + + EG V +M F++RG+I S T + F FN
Sbjct: 450 FSQMDDQLLDAICGCLVSSLSTAGTYIFREGDPVNEMLFVIRGQIESSTTNGGRSGF-FN 508
Query: 92 AS--NDGHFCGEELLPRA----SVLQLGGLPISTRTVIAHTPVEAFVIEADDWKQLVNSF 145
++ G FCGEELL A S L LP STR+V A + VEAF + A+D K + + F
Sbjct: 509 STTLRPGDFCGEELLTWALMPNSTLN---LPSSTRSVRALSEVEAFALSAEDLKFVAHQF 565
Query: 146 -MLPDDQLPYIFR 157
L +L + FR
Sbjct: 566 KRLQSKKLQHAFR 578
>sp|Q8GWD2|CNG12_ARATH Probable cyclic nucleotide-gated ion channel 12 OS=Arabidopsis
thaliana GN=CNGC12 PE=2 SV=2
Length = 649
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 36 DEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTT----IRTTTFSFN 91
D L A+ D +K V Y S +V EG VE+M + RGK+ S + +R
Sbjct: 441 DGWLLEAVCDRVKSVFYLANSFIVREGHPVEEMLIVTRGKLKSTTGSHEMGVRNNCCDL- 499
Query: 92 ASNDGHFCGEELLPRASVLQLGGLPISTRTVIAHTPVEAFVIEADDWKQLVNSF-MLPDD 150
DG CGE L + LP STRTV+ T VE F++ DD K + + +
Sbjct: 500 --QDGDICGELLFNGSR------LPTSTRTVMTLTEVEGFILLPDDIKFIASHLNVFQRQ 551
Query: 151 QLPYIFRL 158
+L FRL
Sbjct: 552 KLQRTFRL 559
>sp|Q9LD37|CNG20_ARATH Probable cyclic nucleotide-gated ion channel 20, chloroplastic
OS=Arabidopsis thaliana GN=CNGC20 PE=2 SV=1
Length = 764
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 22/130 (16%)
Query: 30 QVFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWS--EPTTIRTTT 87
++F +DE L+A+ + LK Y S ++H G VEKM FIVRG++ S E ++
Sbjct: 592 RIFSLMDEPILDAIRERLKQRTYIGSSTVLHRGGLVEKMVFIVRGEMESIGEDGSVLPLY 651
Query: 88 FSFNASNDGHFCGEEL----LPRASVLQLG--------GLPISTRTVIAHTPVEAFVIEA 135
+G CGEEL L R+SV G GL +S+R V T VEAF +
Sbjct: 652 -------EGDVCGEELLTWCLERSSVNPDGTRIRMPSKGL-LSSRNVRCVTNVEAFSLSV 703
Query: 136 DDWKQLVNSF 145
D + + + F
Sbjct: 704 ADLEDVTSLF 713
>sp|Q9LDR2|CNG19_ARATH Putative cyclic nucleotide-gated ion channel 19 OS=Arabidopsis
thaliana GN=CNGC19 PE=3 SV=1
Length = 729
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 16/126 (12%)
Query: 30 QVFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFS 89
++F +DE L+++ + LK Y S ++H VEKM FIVRG++ S S
Sbjct: 559 RIFSLMDESVLDSIRERLKQRTYIRSSTVLHHRGLVEKMVFIVRGEMESIGEDGSVLPLS 618
Query: 90 FNASNDGHFCGEELL--------PRASVLQL--GGLPISTRTVIAHTPVEAFVIEADDWK 139
+G CGEELL P + +++ GL +S R V T VEAF + D +
Sbjct: 619 -----EGDVCGEELLTWCLSSINPDGTRIKMPPKGL-VSNRNVRCVTNVEAFSLSVADLE 672
Query: 140 QLVNSF 145
+ + F
Sbjct: 673 DVTSLF 678
>sp|Q94AS9|CNGC4_ARATH Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana
GN=CNGC4 PE=2 SV=2
Length = 694
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSF 90
+F +D+ L + D +K + +T+ + EG V++M F+VRG + S +R S
Sbjct: 496 LFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHLQSS-QLLRDGVKSC 554
Query: 91 NASNDGHFCGEELLP---RASVLQLGGLPISTRTVIAHTPVEAFVIEADDWKQLVNSF 145
G+F G+ELL R ++ LP S+ T++ EAF ++A+D K + F
Sbjct: 555 CMLGPGNFSGDELLSWCLRRPFVER--LPPSSSTLVTLETTEAFGLDAEDVKYVTQHF 610
>sp|O65718|CNGC2_ARATH Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana
GN=CNGC2 PE=1 SV=1
Length = 726
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSF 90
+F +D+ L+ + D K +++ ++ EG V++M FI+RG++ ++ +
Sbjct: 531 LFRGMDDLILDNICDRAKPRVFSKDEKIIREGDPVQRMIFIMRGRV-KRIQSLSKGVLAT 589
Query: 91 NASNDGHFCGEELLPRASVLQ---LGGLPISTRTVIAHTPVEAFVIEADDWKQLVNSF 145
+ G + G+ELL + L+ L LP S+ T + +EAF + ++D + + + F
Sbjct: 590 STLEPGGYLGDELL--SWCLRRPFLDRLPPSSATFVCLENIEAFSLGSEDLRYITDHF 645
>sp|P00516|KGP1_BOVIN cGMP-dependent protein kinase 1 OS=Bos taurus GN=PRKG1 PE=1 SV=2
Length = 671
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 26/142 (18%)
Query: 12 NIITHANTLTPLHSLVLHQVFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFI 71
+I H + L S+ F + E L+ + D+L+ Y ++ +G+ + F I
Sbjct: 205 GLIKHTEYMEFLKSV---PTFQSLPEEILSKLADVLEETHYENGEYIIRQGARGDTFFII 261
Query: 72 VRGKI--------WSEPTTIRTTTFSFNASNDGHFCGEELLPRASVLQLGGLPISTRTVI 123
+GK+ +P +RT G + GE+ L G + T VI
Sbjct: 262 SKGKVNVTREDSPNEDPVFLRTL-------GKGDWFGEKALQ--------GEDVRTANVI 306
Query: 124 AHTPVEAFVIEADDWKQLVNSF 145
A V VI+ D +K L+
Sbjct: 307 AAEAVTCLVIDRDSFKHLIGGL 328
>sp|O77676|KGP1_RABIT cGMP-dependent protein kinase 1 OS=Oryctolagus cuniculus GN=PRKG1
PE=1 SV=3
Length = 671
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 55/142 (38%), Gaps = 26/142 (18%)
Query: 12 NIITHANTLTPLHSLVLHQVFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFI 71
+I H + L S+ F + E L+ + D+L+ Y + +G+ + F I
Sbjct: 205 GLIKHTEYMEFLKSV---PTFQSLPEEILSKLADVLEETHYENEEYSIRQGARGDTFFII 261
Query: 72 VRGKI--------WSEPTTIRTTTFSFNASNDGHFCGEELLPRASVLQLGGLPISTRTVI 123
+GK+ +P +RT G + GE+ L G + T VI
Sbjct: 262 SKGKVNVTREDSPSEDPIFLRTL-------GKGDWFGEKALQ--------GEDVRTANVI 306
Query: 124 AHTPVEAFVIEADDWKQLVNSF 145
A V VI+ D +K L+
Sbjct: 307 AAEAVTCLVIDRDSFKHLIGGL 328
>sp|P19571|AMT6_BACS7 Glucan 1,4-alpha-maltohexaosidase OS=Bacillus sp. (strain 707) PE=1
SV=1
Length = 518
Score = 33.1 bits (74), Expect = 0.70, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 51 PYTERSILVHEGSGVEKMFFIVR---GKIWSEPTTIRTTTFSFNASNDGHF 98
P + + ++ +G+G K F+ R G++WS+ T RT T + NA G+F
Sbjct: 455 PNSGLATIMSDGAGGSKWMFVGRNKAGQVWSDITGNRTGTVTINADGWGNF 505
>sp|Q2YAA3|NUOCD_NITMU NADH-quinone oxidoreductase subunit C/D OS=Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849) GN=nuoC PE=3 SV=1
Length = 608
Score = 33.1 bits (74), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Query: 3 CLFKLPCGLNIITHANTLTPLHSLVLHQVFDRIDEHFLNAMLDLLKLVPYTERSILVHEG 62
CL +P G + H T PL LH + ID HFL + ++P E + +
Sbjct: 492 CLENMPAGAHKADHPLTTPPLKKHTLHDIETLID-HFLG--VSWGPVIPPGEAFVGIEAT 548
Query: 63 SGVEKMFFIVRGKIWSEPTTIRTTTF 88
G + I G + IRT +F
Sbjct: 549 KGNNGYYLISDGNTTAYRVRIRTPSF 574
>sp|A0B5N0|NADM_METTP Nicotinamide-nucleotide adenylyltransferase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_0206 PE=3
SV=1
Length = 170
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 24 HSLVLHQVFDRIDEHFLN---AMLDLLKLVPYT--ERSILVHEG-SGVEKMFFIV----- 72
H LVL Q+ +DE + A + P+T ER +++ + + F+I+
Sbjct: 17 HHLVLEQISREVDEIIVGIGTAQISHTVTDPFTAGERIAMIYGALRELGRWFYIIPLPDI 76
Query: 73 -RGKIWSEPTTIRTTTFSFNASNDGHFCGEELLPRASVLQLGGLPISTRTVIAHTPVEAF 131
R +W T F SN+ EL A +++ P+ R V + T +
Sbjct: 77 NRNAVWVSHVKSMTPPFEVVYSNNPLVV--ELFMEAG-MEVRRPPMYRREVYSGTVIRRL 133
Query: 132 VIEADDWKQLV 142
+IE DW+QLV
Sbjct: 134 MIEGGDWRQLV 144
>sp|A9HE81|ACCD_GLUDA Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 /
DSM 5601 / PAl5) GN=accD PE=3 SV=2
Length = 300
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Query: 52 YTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSFNASNDGHFCGEELL--PRASV 109
YTER S +++ + G+I + F F A G GE L R ++
Sbjct: 92 YTERLKDERSKSQLDESMAVAHGRIGGHDAVVAVMAFEFIAGTMGAALGEAFLAAARLAI 151
Query: 110 LQLGGLPISTRTVIAHTPVEAFVIEADDWKQLVNSFMLPDDQLPYIFRLT 159
LQ L + T + A E V + V ML D LPYI LT
Sbjct: 152 LQKAPLVVFTASGGARMQ-EGMVSLMQMPRTTVAVQMLRDAGLPYIVVLT 200
>sp|O88703|HCN2_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Mus musculus GN=Hcn2 PE=1
SV=1
Length = 863
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 15/116 (12%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSF 90
+F D +F+ AML LK + ++ EG+ +KM+FI G + ++ T
Sbjct: 517 LFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVV-----SVLTKGNKE 571
Query: 91 NASNDGHFCGE-ELLPRASVLQLGGLPISTRTVIAHTPVEAFVIEADDWKQLVNSF 145
+DG + GE LL R T +V A T + + D++ +++ +
Sbjct: 572 MKLSDGSYFGEICLLTRGR---------RTASVRADTYCRLYSLSVDNFNEVLEEY 618
>sp|Q9JKA9|HCN2_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Rattus norvegicus GN=Hcn2
PE=2 SV=3
Length = 863
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 15/116 (12%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSF 90
+F D +F+ AML LK + ++ EG+ +KM+FI G + ++ T
Sbjct: 517 LFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVV-----SVLTKGNKE 571
Query: 91 NASNDGHFCGE-ELLPRASVLQLGGLPISTRTVIAHTPVEAFVIEADDWKQLVNSF 145
+DG + GE LL R T +V A T + + D++ +++ +
Sbjct: 572 MKLSDGSYFGEICLLTRGR---------RTASVRADTYCRLYSLSVDNFNEVLEEY 618
>sp|B0T695|ACCD_CAUSK Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
OS=Caulobacter sp. (strain K31) GN=accD PE=3 SV=1
Length = 308
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 1/110 (0%)
Query: 51 PYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSFNASNDGHFCGEELLPRASVL 110
PY ER + +G + I GK+ P + F+F + G GE + A
Sbjct: 112 PYKERLAAARKATGEQDAMAIGYGKVGGAPAVVLVQDFAFMGGSLGMAAGEGFIAAAEAA 171
Query: 111 QLGGLPISTRTVIAHTPVEAFVIEADDWKQLVNSF-MLPDDQLPYIFRLT 159
+P+ T ++ + + + ML D LPY+ LT
Sbjct: 172 IARQVPLVAFTAAGGARMQEGALSLMQMARTTLAINMLKDAGLPYVVVLT 221
>sp|O88705|HCN3_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Mus musculus GN=Hcn3 PE=1
SV=1
Length = 779
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 24 HSLVLHQ-VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTT 82
LV H +F D F+ A+L L+ + ++V EGS KM+FI G +
Sbjct: 419 RGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLARG 478
Query: 83 IRTTTFSFNASNDGHFCGE 101
R T + DG + GE
Sbjct: 479 ARDTRLT-----DGSYFGE 492
>sp|Q9UL51|HCN2_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Homo sapiens GN=HCN2 PE=1
SV=3
Length = 889
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 15/116 (12%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSF 90
+F D +F+ AML LK + ++ EG+ +KM+FI G + ++ T
Sbjct: 544 LFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVV-----SVLTKGNKE 598
Query: 91 NASNDGHFCGE-ELLPRASVLQLGGLPISTRTVIAHTPVEAFVIEADDWKQLVNSF 145
+DG + GE LL R T +V A T + + D++ +++ +
Sbjct: 599 MKLSDGSYFGEICLLTRGR---------RTASVRADTYCRLYSLSVDNFNEVLEEY 645
>sp|Q9P1Z3|HCN3_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Homo sapiens GN=HCN3 PE=2
SV=2
Length = 774
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 24 HSLVLHQ-VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTT 82
LV H +F D F+ A+L L+ + ++V EGS KM+FI G +
Sbjct: 420 RGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLARG 479
Query: 83 IRTTTFSFNASNDGHFCGE 101
R T + DG + GE
Sbjct: 480 ARDTRLT-----DGSYFGE 493
>sp|Q9JKA8|HCN3_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Rattus norvegicus GN=Hcn3
PE=2 SV=1
Length = 780
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 24 HSLVLHQ-VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTT 82
LV H +F D F+ A+L L+ + ++V EGS KM+FI G +
Sbjct: 419 RGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLARG 478
Query: 83 IRTTTFSFNASNDGHFCGE 101
R T + DG + GE
Sbjct: 479 ARDTRLT-----DGSYFGE 492
>sp|P0ACK1|CRP_SHIFL cAMP receptor protein OS=Shigella flexneri GN=crp PE=3 SV=1
Length = 210
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 52 YTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSFNASNDGHFCGE 101
Y +S L+H+G E +++IV+G + + N G F GE
Sbjct: 24 YPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGE 73
>sp|P0ACJ8|CRP_ECOLI cAMP receptor protein OS=Escherichia coli (strain K12) GN=crp PE=1
SV=1
Length = 210
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 52 YTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSFNASNDGHFCGE 101
Y +S L+H+G E +++IV+G + + N G F GE
Sbjct: 24 YPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGE 73
>sp|P0ACJ9|CRP_ECOL6 cAMP receptor protein OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=crp PE=3 SV=1
Length = 210
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 52 YTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSFNASNDGHFCGE 101
Y +S L+H+G E +++IV+G + + N G F GE
Sbjct: 24 YPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGE 73
>sp|P0ACK0|CRP_ECO57 cAMP receptor protein OS=Escherichia coli O157:H7 GN=crp PE=1 SV=1
Length = 210
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 52 YTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSFNASNDGHFCGE 101
Y +S L+H+G E +++IV+G + + N G F GE
Sbjct: 24 YPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGE 73
>sp|P0A2T6|CRP_SALTY cAMP receptor protein OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=crp PE=4 SV=1
Length = 210
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 52 YTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSFNASNDGHFCGE 101
Y +S L+H+G E +++IV+G + + N G F GE
Sbjct: 24 YPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGE 73
>sp|P0A2T7|CRP_ENTAE cAMP receptor protein OS=Enterobacter aerogenes GN=crp PE=4 SV=1
Length = 210
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 52 YTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSFNASNDGHFCGE 101
Y +S L+H+G E +++IV+G + + N G F GE
Sbjct: 24 YPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGE 73
>sp|O88704|HCN1_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Mus musculus GN=Hcn1 PE=1
SV=1
Length = 910
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRG 74
+F D +F+ AML L+ + ++ EG+ +KM+FI G
Sbjct: 464 LFANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHG 507
>sp|Q9MZS1|HCN1_RABIT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Oryctolagus cuniculus
GN=HCN1 PE=2 SV=2
Length = 822
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFI---VRGKIWSEPTTIRTTT 87
+F D +F+ AML L+ + ++ EG+ +KM+FI V G I ++ T
Sbjct: 411 LFANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEMKLT- 469
Query: 88 FSFNASNDGHFCGE 101
DG + GE
Sbjct: 470 -------DGSYFGE 476
>sp|Q9JKB0|HCN1_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Rattus norvegicus GN=Hcn1
PE=2 SV=1
Length = 910
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRG 74
+F D +F+ AML L+ + ++ EG+ +KM+FI G
Sbjct: 464 LFANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHG 507
>sp|O60741|HCN1_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Homo sapiens GN=HCN1 PE=2
SV=3
Length = 890
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 19/118 (16%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFI---VRGKIWSEPTTIRTTT 87
+F D +F+ AML L+ + ++ EG+ +KM+FI V G I ++ T
Sbjct: 475 LFANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEMKLT- 533
Query: 88 FSFNASNDGHFCGEELLPRASVLQLGGLPISTRTVIAHTPVEAFVIEADDWKQLVNSF 145
DG + GE L L G T +V A T + + D++ +++ +
Sbjct: 534 -------DGSYFGEICL-----LTKGR---RTASVRADTYCRLYSLSVDNFNEVLEEY 576
>sp|Q7VRV4|NUOCD_BLOFL NADH-quinone oxidoreductase subunit C/D OS=Blochmannia floridanus
GN=nuoC PE=3 SV=1
Length = 596
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Query: 3 CLFKLPCGLNIITHANTLTPLHSLVLHQVFDRIDEHFLNAMLDLLKLVPYTERSILVHEG 62
CL +P G H T P+ L + + + HFL ++P E +V
Sbjct: 480 CLKNMPTGPVKSDHPLTTPPMKKYALKHI-ETLITHFLQVSWG--PVIPPNESLQMVEAT 536
Query: 63 SGVEKMFFIVRGKIWSEPTTIRTTTF 88
G+ + I G S T IRT +F
Sbjct: 537 KGINSYYLISDGNTMSYRTRIRTPSF 562
>sp|Q0AWN7|YBEY_SYNWW Endoribonuclease YbeY OS=Syntrophomonas wolfei subsp. wolfei
(strain Goettingen) GN=ybeY PE=3 SV=1
Length = 156
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 41 NAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSFNASNDGHFCG 100
NA+ ++KL P TE S+++ + S ++++ I RG+ + PT + +F+ N
Sbjct: 27 NAVAKMVKLSPNTELSVMIVDNSYIKELNLIYRGE--NNPTDV--LSFAMN-----ELSE 77
Query: 101 EEL---LPRASVLQLGGLPISTRTVIAHTP 127
EE+ LP V LG + +S ++ +
Sbjct: 78 EEMDLDLP-GEVNVLGDIVVSLEKAVSQSE 106
>sp|C3KDV4|RSGA_PSEFS Putative ribosome biogenesis GTPase RsgA OS=Pseudomonas fluorescens
(strain SBW25) GN=rsgA PE=3 SV=1
Length = 343
Score = 30.0 bits (66), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 23 LHSLVLHQVFDRIDEH---FLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKI 76
+ L+L FD IDE LNA+L + + + Y + H G+G+E++ + G+I
Sbjct: 156 IRPLLLLNKFDLIDEQNAPALNALLAVYRTLGYPVLEVSAHHGNGMEQLQQQLDGRI 212
>sp|Q3KIZ8|RSGA_PSEPF Putative ribosome biogenesis GTPase RsgA OS=Pseudomonas fluorescens
(strain Pf0-1) GN=rsgA PE=3 SV=1
Length = 343
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 23 LHSLVLHQVFDRIDEH---FLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKI 76
+ L+L FD IDE LNA+L + + + Y + H G+G+E++ + G+I
Sbjct: 156 IRPLLLLNKFDLIDEQNAPALNALLAVYRTLGYPVLEVSAHHGNGMEQLQKQLDGRI 212
>sp|Q9Y3Q4|HCN4_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Homo sapiens GN=HCN4 PE=1
SV=1
Length = 1203
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSF 90
+F D +F+ +ML L+ + ++ EG+ +KM+FI G + ++ T
Sbjct: 595 LFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVV-----SVLTKGNKE 649
Query: 91 NASNDGHFCGE 101
DG + GE
Sbjct: 650 TKLADGSYFGE 660
>sp|Q9TV66|HCN4_RABIT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Oryctolagus cuniculus
GN=HCN4 PE=2 SV=1
Length = 1175
Score = 29.6 bits (65), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSF 90
+F D +F+ +ML L+ + ++ EG+ +KM+FI G + ++ T
Sbjct: 596 LFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVV-----SVLTKGNKE 650
Query: 91 NASNDGHFCGE 101
DG + GE
Sbjct: 651 TKLADGSYFGE 661
>sp|Q9JKA7|HCN4_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Rattus norvegicus GN=Hcn4
PE=2 SV=1
Length = 1198
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 31 VFDRIDEHFLNAMLDLLKLVPYTERSILVHEGSGVEKMFFIVRGKIWSEPTTIRTTTFSF 90
+F D +F+ +ML L+ + ++ EG+ +KM+FI G + ++ T
Sbjct: 595 LFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVV-----SVLTKGNKE 649
Query: 91 NASNDGHFCGE 101
DG + GE
Sbjct: 650 TKLADGSYFGE 660
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.141 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,228,567
Number of Sequences: 539616
Number of extensions: 2334199
Number of successful extensions: 6117
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 6056
Number of HSP's gapped (non-prelim): 54
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)