BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038044
MGALPLHSSLLILERDVFESSYIRLAVSANQKWKNEPSTSGQTSKIGSKSACFLGKSFLM
RRHGWKIAFALDTGGISGSGGQESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIARKNLP
MKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPPSSTGRLQSFV
VMMNYWKAGVCLGLFVDAFKLGS

High Scoring Gene Products

Symbol, full name Information P value
NPQ7
AT1G65420 		protein from Arabidopsis thaliana 2.2e-50
AT3G56830 protein from Arabidopsis thaliana 6.3e-21

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038044
        (203 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2206305 - symbol:NPQ7 "AT1G65420" species:3702...   524  2.2e-50   1
TAIR|locus:2103645 - symbol:AT3G56830 "AT3G56830" species...   246  6.3e-21   1


>TAIR|locus:2206305 [details] [associations]
            symbol:NPQ7 "AT1G65420" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0010196 "nonphotochemical
            quenching" evidence=IMP] GO:GO:0016021 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009507 EMBL:AC004512
            UniGene:At.28694 UniGene:At.66795 GO:GO:0010196 EMBL:BT025776
            EMBL:AY088215 IPI:IPI00544455 PIR:T02365 RefSeq:NP_564851.1
            STRING:O80813 EnsemblPlants:AT1G65420.1 GeneID:842853
            KEGG:ath:AT1G65420 TAIR:At1g65420 eggNOG:NOG240593
            HOGENOM:HOG000155497 InParanoid:O80813 OMA:IGMLMYK PhylomeDB:O80813
            ProtClustDB:CLSN2689032 Genevestigator:O80813 GermOnline:AT1G65420
            InterPro:IPR007572 Pfam:PF04483 Uniprot:O80813
        Length = 197

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 109/152 (71%), Positives = 118/152 (77%)

Query:    56 KSFLMRRHGWKIAFALDTGG-ISGSGGQ-ESLNGDGPDLGGTRLGRIVSAGGRQLLEKLN 113
             KSF +RR   KIAFALDTG  I G  G+ + +NGD   LG TRLGRI  AGG+QLL K+N
Sbjct:    46 KSFQIRRPNRKIAFALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGRIAIAGGKQLLGKIN 105

Query:   114 IARKNLPMKIFLLLLGFYTANALATILGQTGDWDXXXXXXXXXXIEGIGMLMYKKPPSS- 172
              ARKN PMKIFLLLLGFYTANALATILGQTGDWD          IEGIGMLMYKKP SS 
Sbjct:   106 SARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYKKPSSSM 165

Query:   173 -TGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS 203
              +G+LQSFVV MN+WKAGVCLGLFVDAFKLGS
Sbjct:   166 FSGKLQSFVVFMNFWKAGVCLGLFVDAFKLGS 197


>TAIR|locus:2103645 [details] [associations]
            symbol:AT3G56830 "AT3G56830" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009507 "chloroplast" evidence=IDA] GO:GO:0009507
            EMBL:CP002686 InterPro:IPR007572 Pfam:PF04483 IPI:IPI00539968
            RefSeq:NP_191242.2 UniGene:At.75281 UniGene:At.9843
            EnsemblPlants:AT3G56830.1 GeneID:824850 KEGG:ath:AT3G56830
            OMA:ECIGALM PhylomeDB:F4J0S9 Uniprot:F4J0S9
        Length = 230

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 54/142 (38%), Positives = 75/142 (52%)

Query:    61 RRHGWKIAFALDTGG--ISGSGGQESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIARKN 118
             RR  W        GG     + G  S N       G RL + +     +LL K+   +K+
Sbjct:    51 RRMSWT-TIKSSVGGDRFDPASGSSSNNSSR----GLRLIKAIQVLRSKLLVKIQEIKKD 105

Query:   119 LPMKIFLLLLGFYTANALATILGQTGDWDXXXXXXXXXXIEGIGMLMYKKPPSSTGRLQS 178
             LP K+F LL+GFY+A A +T +GQTGDWD          +E IG LMY+       +++S
Sbjct:   106 LPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYRASIPLINKMRS 165

Query:   179 FVVMMNYWKAGVCLGLFVDAFK 200
              + M NYWK G+ LGLF+D+FK
Sbjct:   166 TITMFNYWKTGLALGLFLDSFK 187


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.138   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      203       193   0.00098  110 3  11 22  0.46    32
                                                     31  0.43    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  157 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.82u 0.13s 16.95t   Elapsed:  00:00:00
  Total cpu time:  16.82u 0.13s 16.95t   Elapsed:  00:00:00
  Start:  Fri May 10 12:06:11 2013   End:  Fri May 10 12:06:11 2013

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