Query 038044
Match_columns 203
No_of_seqs 115 out of 136
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 11:37:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038044.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/038044hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2yvxa3 f.57.1.1 (A:276-448) M 47.6 11 0.00079 28.8 4.6 31 113-143 5-35 (173)
2 d2e74e1 f.23.24.1 (E:1-32) Pet 8.0 1.8E+02 0.013 16.1 3.0 19 120-138 8-26 (32)
3 d1otsa_ f.20.1.1 (A:) Clc chlo 7.9 4.3E+02 0.031 21.1 6.8 30 106-135 4-33 (444)
4 d1erya_ a.10.1.1 (A:) ER-11 {E 7.4 52 0.0038 19.3 0.4 10 29-40 30-39 (39)
5 d1h41a2 d.92.2.2 (A:5-151) alp 7.1 82 0.006 22.3 1.5 9 187-195 117-125 (147)
6 d3b60a2 f.37.1.1 (A:10-328) Mu 5.9 3.8E+02 0.028 18.4 4.8 36 105-140 4-39 (319)
7 d1wm7a_ g.3.7.2 (A:) Neurotoxi 5.0 57 0.0042 18.1 -0.4 13 26-38 17-29 (29)
8 d1lfpa_ e.39.1.1 (A:) Hypothet 4.3 40 0.0029 26.2 -2.1 33 59-104 20-52 (243)
9 d1kona_ e.39.1.1 (A:) Hypothet 4.3 68 0.005 24.9 -0.6 34 59-105 22-55 (244)
10 d1mw7a_ e.39.1.1 (A:) Hypothet 4.1 60 0.0044 24.8 -1.0 32 61-105 4-35 (220)
No 1
>d2yvxa3 f.57.1.1 (A:276-448) Mg2+ transporter MgtE {Thermus thermophilus [TaxId: 274]}
Probab=47.57 E-value=11 Score=28.75 Aligned_cols=31 Identities=16% Similarity=0.188 Sum_probs=24.6
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHhhhhc
Q 038044 113 NIARKNLPMKIFLLLLGFYTANALATILGQT 143 (203)
Q Consensus 113 ~npWRR~Sl~lIsLL~GFflgna~sTi~Gq~ 143 (203)
+...+|++++++.++.|+..+..++.+-...
T Consensus 5 ~~~k~RlpWL~i~l~~~~~~a~ii~~Fe~~l 35 (173)
T d2yvxa3 5 ALWLARVRWLVILILTGMVTSSILQGFESVL 35 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456799999999999999999988654433
No 2
>d2e74e1 f.23.24.1 (E:1-32) PetL subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=7.98 E-value=1.8e+02 Score=16.14 Aligned_cols=19 Identities=16% Similarity=0.223 Sum_probs=12.5
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 038044 120 PMKIFLLLLGFYTANALAT 138 (203)
Q Consensus 120 Sl~lIsLL~GFflgna~sT 138 (203)
-+..|.|+||.-+|-.|+.
T Consensus 8 yivfialffgiavgiifai 26 (32)
T d2e74e1 8 YIVFIALFFGIAVGIIFAI 26 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhheeeE
Confidence 4556777777777766553
No 3
>d1otsa_ f.20.1.1 (A:) Clc chloride channel {Escherichia coli [TaxId: 562]}
Probab=7.91 E-value=4.3e+02 Score=21.15 Aligned_cols=30 Identities=13% Similarity=0.191 Sum_probs=23.2
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Q 038044 106 RQLLEKLNIARKNLPMKIFLLLLGFYTANA 135 (203)
Q Consensus 106 ~rL~~~~~npWRR~Sl~lIsLL~GFflgna 135 (203)
+.+++.++.+.+++.+.+++.+.|...|-.
T Consensus 4 ~~~~~~~~~~~~~l~~~~la~liGi~~gl~ 33 (444)
T d1otsa_ 4 QLIRQLLERDKTPLAILFMAAVVGTLVGLA 33 (444)
T ss_dssp HHHHHHTTCSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 345666677778888899999999988865
No 4
>d1erya_ a.10.1.1 (A:) ER-11 {Euplotes raikovi [TaxId: 5938]}
Probab=7.36 E-value=52 Score=19.31 Aligned_cols=10 Identities=40% Similarity=0.375 Sum_probs=6.2
Q ss_pred hcccccCCCCCc
Q 038044 29 ANQKWKNEPSTS 40 (203)
Q Consensus 29 ~~~~~~~~~~~~ 40 (203)
.||| |||.||
T Consensus 30 vmqn--ceppfs 39 (39)
T d1erya_ 30 VMQN--CEPPFS 39 (39)
T ss_dssp HHHH--SCSCC-
T ss_pred HHhc--CCCCCC
Confidence 3565 688886
No 5
>d1h41a2 d.92.2.2 (A:5-151) alpha-D-glucuronidase, N-terminal domain {Pseudomonas cellulosa [TaxId: 155077]}
Probab=7.08 E-value=82 Score=22.29 Aligned_cols=9 Identities=44% Similarity=0.763 Sum_probs=7.9
Q ss_pred HHHHHHHHH
Q 038044 187 KAGVCLGLF 195 (203)
Q Consensus 187 KIGllYGLF 195 (203)
+.|++||.|
T Consensus 117 ~rG~LYG~f 125 (147)
T d1h41a2 117 DVGVLYGSF 125 (147)
T ss_dssp HHHHHHHHH
T ss_pred CcchHhHHH
Confidence 789999987
No 6
>d3b60a2 f.37.1.1 (A:10-328) Multidrug resistance ABC transporter MsbA, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=5.91 E-value=3.8e+02 Score=18.42 Aligned_cols=36 Identities=17% Similarity=0.169 Sum_probs=18.8
Q ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhh
Q 038044 105 GRQLLEKLNIARKNLPMKIFLLLLGFYTANALATIL 140 (203)
Q Consensus 105 ~~rL~~~~~npWRR~Sl~lIsLL~GFflgna~sTi~ 140 (203)
-+|+...++.-|+.+-+.+++.++.-.+....+...
T Consensus 4 ~krl~~~~~~~k~~l~~~~i~~~~~~~~~~~~~~~~ 39 (319)
T d3b60a2 4 FRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLL 39 (319)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356777776666665555554444433334433333
No 7
>d1wm7a_ g.3.7.2 (A:) Neurotoxin bmp01 {Chinese scorpion (Buthus martensii karsch) [TaxId: 34649]}
Probab=4.96 E-value=57 Score=18.09 Aligned_cols=13 Identities=38% Similarity=0.391 Sum_probs=9.9
Q ss_pred ehhhcccccCCCC
Q 038044 26 AVSANQKWKNEPS 38 (203)
Q Consensus 26 ~~~~~~~~~~~~~ 38 (203)
|-|.+.+|-|||.
T Consensus 17 akcdndkcvcepk 29 (29)
T d1wm7a_ 17 AKCDNDKCVCEPK 29 (29)
T ss_dssp EECSSSSCEEECC
T ss_pred hhccCCceecCCC
Confidence 5677888888883
No 8
>d1lfpa_ e.39.1.1 (A:) Hypothetical protein aq1575 {Aquifex aeolicus [TaxId: 63363]}
Probab=4.27 E-value=40 Score=26.20 Aligned_cols=33 Identities=21% Similarity=0.202 Sum_probs=26.3
Q ss_pred hhhcccceeeeeeccCCCCCCCCCcccCCCCCCCCCchhHHHHHHH
Q 038044 59 LMRRHGWKIAFALDTGGISGSGGQESLNGDGPDLGGTRLGRIVSAG 104 (203)
Q Consensus 59 ~~rr~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lQ~TRL~rli~~i 104 (203)
++-|.+..|.-|.-.||++|. .|.||...++..
T Consensus 20 ~f~k~~r~I~~A~k~GG~DP~-------------~N~~L~~ai~~A 52 (243)
T d1lfpa_ 20 LFSKLIREIIVATRLGGPNPE-------------FNPRLRTAIEQA 52 (243)
T ss_dssp HHHHHHHHHHHHHHHHCSCGG-------------GCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCc-------------cCHHHHHHHHHH
Confidence 347888899999999998885 456888888765
No 9
>d1kona_ e.39.1.1 (A:) Hypothetical protein YebC {Escherichia coli [TaxId: 562]}
Probab=4.25 E-value=68 Score=24.90 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=21.9
Q ss_pred hhhcccceeeeeeccCCCCCCCCCcccCCCCCCCCCchhHHHHHHHH
Q 038044 59 LMRRHGWKIAFALDTGGISGSGGQESLNGDGPDLGGTRLGRIVSAGG 105 (203)
Q Consensus 59 ~~rr~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lQ~TRL~rli~~i~ 105 (203)
.+-|....|.-|.-.||++|. .|.||...++..-
T Consensus 22 ~f~k~~k~I~~A~k~GG~DP~-------------~N~~L~~ai~~Ak 55 (244)
T d1kona_ 22 IFTKIIRELVTAAKLGGGDPD-------------ANPRLRAAVDKAL 55 (244)
T ss_dssp HHHHHHHHHHHHHHC-----C-------------CSTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCc-------------cCHHHHHHHHHHH
Confidence 347888999999999998886 3458888877653
No 10
>d1mw7a_ e.39.1.1 (A:) Hypothetical protein HP0162 {Helicobacter pylori [TaxId: 210]}
Probab=4.14 E-value=60 Score=24.79 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=24.5
Q ss_pred hcccceeeeeeccCCCCCCCCCcccCCCCCCCCCchhHHHHHHHH
Q 038044 61 RRHGWKIAFALDTGGISGSGGQESLNGDGPDLGGTRLGRIVSAGG 105 (203)
Q Consensus 61 rr~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lQ~TRL~rli~~i~ 105 (203)
-|....|.-|.-.||++|. .|.||...++..-
T Consensus 4 ~kl~reI~vAak~GG~Dp~-------------~N~~L~~ai~~Ak 35 (220)
T d1mw7a_ 4 PKLAKAITLAAKDGGSEPD-------------TNAKLRTAILNAK 35 (220)
T ss_dssp HHHHHHHHHHHHTTCSCGG-------------GCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCcc-------------cCHHHHHHHHHHH
Confidence 5677788888889998875 3568888887654
Done!