Query 038064
Match_columns 103
No_of_seqs 107 out of 1203
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 07:12:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038064.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038064hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd03190 GST_C_ECM4_like GST_C 99.8 6.3E-18 1.4E-22 102.1 8.4 96 3-98 30-131 (142)
2 cd03198 GST_C_CLIC GST_C famil 99.8 3.2E-17 7E-22 98.0 10.7 89 5-93 24-132 (134)
3 cd03184 GST_C_Omega GST_C fami 99.7 1.2E-17 2.5E-22 98.7 7.8 89 6-95 28-123 (124)
4 cd03201 GST_C_DHAR GST_C famil 99.7 3.5E-17 7.6E-22 96.5 8.6 86 9-94 29-119 (121)
5 cd03185 GST_C_Tau GST_C family 99.7 1.4E-16 3.1E-21 93.9 10.7 89 7-95 32-125 (126)
6 cd03203 GST_C_Lambda GST_C fam 99.7 2.9E-16 6.2E-21 92.4 9.0 79 14-93 34-119 (120)
7 cd03186 GST_C_SspA GST_N famil 99.7 4.3E-16 9.4E-21 89.6 9.3 77 5-82 30-106 (107)
8 TIGR00862 O-ClC intracellular 99.7 9.2E-16 2E-20 99.5 10.6 90 8-97 121-232 (236)
9 PF00043 GST_C: Glutathione S- 99.7 5.9E-16 1.3E-20 87.2 8.3 70 7-77 25-95 (95)
10 cd03188 GST_C_Beta GST_C famil 99.7 6.5E-16 1.4E-20 89.4 8.6 74 8-83 41-114 (114)
11 cd03209 GST_C_Mu GST_C family, 99.7 9.5E-16 2.1E-20 90.2 9.1 79 7-86 32-110 (121)
12 cd03187 GST_C_Phi GST_C family 99.7 9.1E-16 2E-20 89.4 8.6 78 6-83 41-118 (118)
13 cd03207 GST_C_8 GST_C family, 99.7 1.2E-15 2.6E-20 87.2 8.0 75 7-84 27-101 (103)
14 KOG0406 Glutathione S-transfer 99.6 4.4E-15 9.6E-20 95.2 10.9 98 3-100 122-226 (231)
15 cd03178 GST_C_Ure2p_like GST_C 99.6 1.2E-15 2.6E-20 88.4 7.4 76 7-83 37-112 (113)
16 cd03196 GST_C_5 GST_C family, 99.6 2E-15 4.4E-20 88.2 8.4 76 7-83 38-115 (115)
17 cd03191 GST_C_Zeta GST_C famil 99.6 4.3E-15 9.3E-20 87.2 8.9 75 9-85 43-119 (121)
18 cd03210 GST_C_Pi GST_C family, 99.6 3E-15 6.5E-20 88.7 8.2 78 8-86 33-113 (126)
19 PRK09481 sspA stringent starva 99.6 6E-15 1.3E-19 94.1 10.1 82 7-89 124-206 (211)
20 cd03177 GST_C_Delta_Epsilon GS 99.6 3.6E-15 7.8E-20 87.2 7.8 76 8-84 36-111 (118)
21 cd03183 GST_C_Theta GST_C fami 99.6 7.1E-15 1.5E-19 86.8 9.0 78 5-83 40-120 (126)
22 cd03208 GST_C_Alpha GST_C fami 99.6 8.2E-15 1.8E-19 88.1 8.3 72 13-85 42-115 (137)
23 cd03182 GST_C_GTT2_like GST_C 99.6 1.1E-14 2.3E-19 84.8 7.7 73 6-79 45-117 (117)
24 cd03204 GST_C_GDAP1 GST_C fami 99.6 9E-15 1.9E-19 85.0 7.2 74 5-79 24-111 (111)
25 PF13410 GST_C_2: Glutathione 99.6 1.5E-14 3.3E-19 77.2 7.6 67 6-72 2-69 (69)
26 cd03180 GST_C_2 GST_C family, 99.6 2.1E-14 4.6E-19 82.6 7.7 70 8-79 41-110 (110)
27 PTZ00057 glutathione s-transfe 99.6 1.2E-14 2.6E-19 92.4 7.2 76 10-86 123-200 (205)
28 PRK10542 glutathionine S-trans 99.6 2.1E-14 4.5E-19 90.7 7.9 75 9-85 123-197 (201)
29 TIGR01262 maiA maleylacetoacet 99.6 4.5E-14 9.8E-19 89.7 9.0 76 9-86 128-205 (210)
30 cd03181 GST_C_EFB1gamma GST_C 99.6 3.1E-14 6.6E-19 83.6 7.7 81 6-86 36-117 (123)
31 cd03189 GST_C_GTT1_like GST_C 99.6 4E-14 8.8E-19 82.7 7.9 68 8-77 52-119 (119)
32 PRK13972 GSH-dependent disulfi 99.5 3.3E-14 7.3E-19 90.9 8.1 77 8-86 130-206 (215)
33 cd03206 GST_C_7 GST_C family, 99.5 3.9E-14 8.5E-19 80.6 7.3 70 8-79 31-100 (100)
34 PLN02473 glutathione S-transfe 99.5 5.2E-14 1.1E-18 89.8 8.1 77 8-84 133-210 (214)
35 PLN02395 glutathione S-transfe 99.5 7.5E-14 1.6E-18 89.0 8.4 78 8-85 132-210 (215)
36 cd03202 GST_C_etherase_LigE GS 99.5 1.4E-13 3E-18 81.5 7.9 69 8-76 56-124 (124)
37 PLN02817 glutathione dehydroge 99.5 2.8E-13 6E-18 89.4 9.7 82 13-94 174-260 (265)
38 cd03195 GST_C_4 GST_C family, 99.5 2.6E-13 5.6E-18 79.2 7.6 72 8-84 40-112 (114)
39 PLN02378 glutathione S-transfe 99.5 2.5E-13 5.5E-18 86.9 7.8 81 11-91 119-205 (213)
40 cd03194 GST_C_3 GST_C family, 99.5 8.6E-13 1.9E-17 77.0 9.0 71 9-84 40-113 (114)
41 PRK10357 putative glutathione 99.5 6.6E-13 1.4E-17 84.0 8.7 78 8-86 123-201 (202)
42 PRK11752 putative S-transferas 99.4 1.1E-12 2.4E-17 86.5 8.8 76 9-85 177-258 (264)
43 cd03179 GST_C_1 GST_C family, 99.4 1.1E-12 2.3E-17 74.9 7.0 68 5-74 38-105 (105)
44 cd03193 GST_C_Metaxin GST_C fa 99.4 2.8E-12 6E-17 71.4 7.5 67 8-74 17-88 (88)
45 cd00299 GST_C_family Glutathio 99.4 4.1E-12 8.9E-17 71.4 7.2 69 5-73 31-100 (100)
46 cd03192 GST_C_Sigma_like GST_C 99.4 1.8E-12 3.9E-17 74.0 5.6 69 5-73 34-104 (104)
47 PRK10387 glutaredoxin 2; Provi 99.3 3.4E-12 7.3E-17 81.1 5.5 66 10-79 142-207 (210)
48 PF14497 GST_C_3: Glutathione 99.3 3.2E-12 7E-17 72.6 4.3 65 8-75 33-99 (99)
49 COG0625 Gst Glutathione S-tran 99.3 1.9E-11 4.1E-16 77.9 8.0 74 5-80 126-199 (211)
50 PRK15113 glutathione S-transfe 99.3 1.4E-11 3.1E-16 78.7 7.2 75 8-87 135-210 (214)
51 cd03200 GST_C_JTV1 GST_C famil 99.3 2.7E-11 6E-16 68.7 7.0 58 13-75 38-95 (96)
52 cd03205 GST_C_6 GST_C family, 99.2 1.6E-10 3.5E-15 65.5 6.6 66 5-73 32-98 (98)
53 cd03211 GST_C_Metaxin2 GST_C f 99.2 8.4E-11 1.8E-15 69.8 5.4 67 8-74 55-126 (126)
54 cd03212 GST_C_Metaxin1_3 GST_C 99.2 2.3E-10 5E-15 68.8 7.3 69 7-75 61-134 (137)
55 cd03197 GST_C_mPGES2 GST_C fam 99.1 3.4E-10 7.3E-15 68.6 7.1 48 27-75 97-145 (149)
56 KOG4420 Uncharacterized conser 99.1 8.4E-10 1.8E-14 71.9 9.0 81 8-88 203-290 (325)
57 KOG1422 Intracellular Cl- chan 99.1 7E-10 1.5E-14 70.1 7.4 89 7-95 120-215 (221)
58 KOG0867 Glutathione S-transfer 99.1 1E-09 2.2E-14 71.0 8.3 82 5-86 128-210 (226)
59 TIGR02182 GRXB Glutaredoxin, G 99.1 2.4E-10 5.2E-15 73.0 4.7 66 9-79 140-206 (209)
60 COG0435 ECM4 Predicted glutath 99.1 1.7E-10 3.7E-15 75.6 3.8 95 1-95 196-296 (324)
61 KOG1695 Glutathione S-transfer 99.0 8.8E-10 1.9E-14 70.2 6.3 75 11-85 124-200 (206)
62 PLN02907 glutamate-tRNA ligase 99.0 1E-09 2.2E-14 80.8 6.7 65 14-78 94-159 (722)
63 KOG0868 Glutathione S-transfer 98.9 2.8E-09 6E-14 66.1 5.6 77 8-86 130-208 (217)
64 KOG2903 Predicted glutathione 98.8 2.5E-09 5.5E-14 69.7 2.2 94 1-94 194-297 (319)
65 PF14834 GST_C_4: Glutathione 98.7 1.6E-07 3.4E-12 54.4 7.2 72 9-85 42-114 (117)
66 KOG4244 Failed axon connection 98.2 2.7E-06 5.9E-11 55.8 4.3 67 9-75 202-272 (281)
67 KOG3027 Mitochondrial outer me 98.0 2.5E-05 5.4E-10 49.8 6.2 69 8-76 175-248 (257)
68 PF04399 Glutaredoxin2_C: Glut 98.0 5.1E-05 1.1E-09 45.4 6.9 68 8-79 57-124 (132)
69 cd03199 GST_C_GRX2 GST_C famil 97.6 0.00026 5.5E-09 42.1 5.8 65 10-78 60-124 (128)
70 KOG3028 Translocase of outer m 97.5 0.0008 1.7E-08 45.3 7.0 68 8-75 161-233 (313)
71 KOG3029 Glutathione S-transfer 97.4 0.00042 9E-09 46.3 5.3 63 14-76 292-355 (370)
72 PF11801 Tom37_C: Tom37 C-term 95.5 0.065 1.4E-06 33.4 5.5 39 14-52 112-154 (168)
73 COG2999 GrxB Glutaredoxin 2 [P 93.4 0.2 4.4E-06 31.7 4.2 67 10-80 142-208 (215)
74 KOG1147 Glutamyl-tRNA syntheta 93.2 0.11 2.5E-06 38.0 3.2 57 13-72 91-151 (712)
75 KOG1668 Elongation factor 1 be 68.5 7.3 0.00016 25.7 2.9 59 16-80 10-68 (231)
76 PF10653 Phage-A118_gp45: Prot 58.8 22 0.00048 17.7 3.1 31 71-101 23-53 (62)
77 PRK15371 effector protein YopJ 56.2 63 0.0014 22.2 5.9 63 10-74 23-87 (287)
78 PF11732 Thoc2: Transcription- 53.6 32 0.00069 18.7 3.4 35 40-74 42-76 (77)
79 cd06891 PX_Vps17p The phosphoi 39.7 33 0.00071 20.9 2.3 17 64-80 112-128 (140)
80 PF03421 YopJ: YopJ Serine/Thr 38.5 1E+02 0.0022 19.4 5.4 59 13-73 2-62 (177)
81 PF00392 GntR: Bacterial regul 34.0 57 0.0012 16.4 2.4 27 17-43 4-31 (64)
82 KOG0485 Transcription factor N 30.9 72 0.0016 21.1 2.9 18 85-102 144-161 (268)
83 PF06552 TOM20_plant: Plant sp 30.8 56 0.0012 20.9 2.3 41 61-101 23-63 (186)
84 KOG4595 Uncharacterized conser 28.0 1.5E+02 0.0032 18.1 4.2 65 37-101 52-116 (139)
85 PF10990 DUF2809: Protein of u 24.9 55 0.0012 18.2 1.4 17 30-46 71-87 (91)
86 PF06720 Phi-29_GP16_7: Bacter 24.4 75 0.0016 18.7 1.9 22 82-103 98-119 (130)
87 cd00649 catalase_peroxidase_1 24.4 1.8E+02 0.004 21.1 4.2 37 14-54 111-147 (409)
88 PHA02776 E7 protein; Provision 22.5 34 0.00073 19.6 0.3 14 32-45 1-14 (101)
89 cd07993 LPLAT_DHAPAT-like Lyso 21.8 1.4E+02 0.0031 18.8 3.1 30 20-49 12-43 (205)
90 COG4365 Uncharacterized protei 21.5 3.5E+02 0.0075 20.1 5.2 41 33-73 203-243 (537)
91 cd08200 catalase_peroxidase_2 21.4 2E+02 0.0043 20.0 3.8 38 14-51 73-112 (297)
92 PF13227 DUF4035: Protein of u 20.9 73 0.0016 16.0 1.3 12 34-45 30-41 (53)
No 1
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.76 E-value=6.3e-18 Score=102.15 Aligned_cols=96 Identities=19% Similarity=0.232 Sum_probs=79.2
Q ss_pred chHHHHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhc------CCcccccCchHHHHHHHHHcc
Q 038064 3 HKGRRAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFG------KSSIEAECPKFKAWVKRCLQR 76 (103)
Q Consensus 3 ~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~------~~~~~~~~p~l~~w~~~~~~~ 76 (103)
.+++..+.....+.+.+..||+.|++++|++|+++|+||+++++++.++.... +......||+|.+|+++|.++
T Consensus 30 ~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~ 109 (142)
T cd03190 30 TTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQN 109 (142)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhcC
Confidence 34555667788899999999999998999999999999999999986553210 111135799999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHH
Q 038064 77 ETIAKALPDEKKVLEHASGMRK 98 (103)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~~~ 98 (103)
|+++++...++.+..|+++++.
T Consensus 110 P~~k~~~~~~~~~~~~~~~~~~ 131 (142)
T cd03190 110 PGVAETTNFDHIKQHYYGSHFP 131 (142)
T ss_pred chHhhhcCHHHHHHHHHhhcCC
Confidence 9999999988889999988753
No 2
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.75 E-value=3.2e-17 Score=97.95 Aligned_cols=89 Identities=21% Similarity=0.333 Sum_probs=73.1
Q ss_pred HHHHhHHHHHHHHHHHHHHHhcCC----------------CCcccCCCCcHhHHhHHhHHHHHhHh----cCCcccccCc
Q 038064 5 GRRAGGAKKEFFEALKTLEGQLGD----------------KPFFGGDNFGYLDLSLIPFYYTYETF----GKSSIEAECP 64 (103)
Q Consensus 5 ~~~~~~~~~~~~~~l~~le~~l~~----------------~~~~~G~~~t~aD~~l~~~~~~~~~~----~~~~~~~~~p 64 (103)
++..+.....+.+.|..||..|.+ ++|++|+++|+|||+++|.+.++... .++++..++|
T Consensus 24 ~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~~P 103 (134)
T cd03198 24 PALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPADLT 103 (134)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCccccCH
Confidence 344566677899999999999986 67999999999999999998766432 2545447899
Q ss_pred hHHHHHHHHHccHHHHHhcCChHHHHHHH
Q 038064 65 KFKAWVKRCLQRETIAKALPDEKKVLEHA 93 (103)
Q Consensus 65 ~l~~w~~~~~~~p~~~~~~~~~~~~~~~~ 93 (103)
+|.+|++++.+||+|+++++..+..+..+
T Consensus 104 ~L~aw~~ri~aRPsfk~t~~~~~~i~~~~ 132 (134)
T cd03198 104 GLWRYLKNAYQREEFTNTCPADQEIELAY 132 (134)
T ss_pred HHHHHHHHHHCCHHHHHHcCCHHHHHHHh
Confidence 99999999999999999999887665543
No 3
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.74 E-value=1.2e-17 Score=98.73 Aligned_cols=89 Identities=26% Similarity=0.433 Sum_probs=75.3
Q ss_pred HHHhHHHHHHHHHHHHHHHhcCC--CCcccCCCCcHhHHhHHhHHHHHhHhcC-----CcccccCchHHHHHHHHHccHH
Q 038064 6 RRAGGAKKEFFEALKTLEGQLGD--KPFFGGDNFGYLDLSLIPFYYTYETFGK-----SSIEAECPKFKAWVKRCLQRET 78 (103)
Q Consensus 6 ~~~~~~~~~~~~~l~~le~~l~~--~~~~~G~~~t~aD~~l~~~~~~~~~~~~-----~~~~~~~p~l~~w~~~~~~~p~ 78 (103)
+..+...+.+.+.+..+|+.|++ ++|++|+++|+||++++|++.++..... .. ...+|+|++|+++|.++|+
T Consensus 28 ~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~-~~~~p~l~~w~~r~~~~p~ 106 (124)
T cd03184 28 SDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLLGYEFP-LDRFPKLKKWMDAMKEDPA 106 (124)
T ss_pred ccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhccccCC-cccChHHHHHHHHhccChH
Confidence 34556778899999999999975 7999999999999999999977654321 22 4779999999999999999
Q ss_pred HHHhcCChHHHHHHHHH
Q 038064 79 IAKALPDEKKVLEHASG 95 (103)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ 95 (103)
++.++++.+.++++++.
T Consensus 107 v~~~~~~~~~~~~~~~~ 123 (124)
T cd03184 107 VQAFYTDTEIHAEFLKS 123 (124)
T ss_pred HHHHhCCHHHHHHHHhc
Confidence 99999999999988764
No 4
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.73 E-value=3.5e-17 Score=96.54 Aligned_cols=86 Identities=26% Similarity=0.481 Sum_probs=70.5
Q ss_pred hHHHHHHHHHHHHHHHhcCC-CCcccCCCCcHhHHhHHhHHHHHhHh----cCCcccccCchHHHHHHHHHccHHHHHhc
Q 038064 9 GGAKKEFFEALKTLEGQLGD-KPFFGGDNFGYLDLSLIPFYYTYETF----GKSSIEAECPKFKAWVKRCLQRETIAKAL 83 (103)
Q Consensus 9 ~~~~~~~~~~l~~le~~l~~-~~~~~G~~~t~aD~~l~~~~~~~~~~----~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 83 (103)
++..+.+.+.+..||..|++ ++|++||++|+||++++|++.++... .++.+...+|+|.+|+++|.++|+|++++
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t~ 108 (121)
T cd03201 29 DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKTK 108 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhcC
Confidence 55667789999999999985 79999999999999999988655432 23333478999999999999999999999
Q ss_pred CChHHHHHHHH
Q 038064 84 PDEKKVLEHAS 94 (103)
Q Consensus 84 ~~~~~~~~~~~ 94 (103)
+..+++++.++
T Consensus 109 ~~~~~~~~~~~ 119 (121)
T cd03201 109 AEKEDVIAGWA 119 (121)
T ss_pred CCHHHHHHHhc
Confidence 98887665543
No 5
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.72 E-value=1.4e-16 Score=93.88 Aligned_cols=89 Identities=42% Similarity=0.760 Sum_probs=74.2
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHh---cCCcc--cccCchHHHHHHHHHccHHHHH
Q 038064 7 RAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETF---GKSSI--EAECPKFKAWVKRCLQRETIAK 81 (103)
Q Consensus 7 ~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~---~~~~~--~~~~p~l~~w~~~~~~~p~~~~ 81 (103)
..+.....+.+.++.+|+.|++++|++|+++|+||+++++++.++... .+.+. ...+|++.+|++++.++|++++
T Consensus 32 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~ 111 (126)
T cd03185 32 EREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKLLDEEKTPLLAAWAERFLELEAVKE 111 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCccccCcccCchHHHHHHHHHhccHHHH
Confidence 445567788999999999999899999999999999999998776432 23221 3679999999999999999999
Q ss_pred hcCChHHHHHHHHH
Q 038064 82 ALPDEKKVLEHASG 95 (103)
Q Consensus 82 ~~~~~~~~~~~~~~ 95 (103)
+++..+..++++++
T Consensus 112 ~~~~~~~~~~~~~~ 125 (126)
T cd03185 112 VLPDRDKLVEFAKA 125 (126)
T ss_pred hCCCHHHHHHHHHh
Confidence 99998888887654
No 6
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.69 E-value=2.9e-16 Score=92.44 Aligned_cols=79 Identities=28% Similarity=0.526 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHhcC---CCCcccCCCCcHhHHhHHhHHHHHhH----hcCCcccccCchHHHHHHHHHccHHHHHhcCCh
Q 038064 14 EFFEALKTLEGQLG---DKPFFGGDNFGYLDLSLIPFYYTYET----FGKSSIEAECPKFKAWVKRCLQRETIAKALPDE 86 (103)
Q Consensus 14 ~~~~~l~~le~~l~---~~~~~~G~~~t~aD~~l~~~~~~~~~----~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 86 (103)
.+.+.++.||+.|+ +++|++| ++|+||++++|++.++.. ..++++..++|+|.+|+++|.++|+++++.++.
T Consensus 34 ~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~~ 112 (120)
T cd03203 34 EAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQDP 112 (120)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCCH
Confidence 45677888888886 4799999 999999999999976542 235554468999999999999999999999998
Q ss_pred HHHHHHH
Q 038064 87 KKVLEHA 93 (103)
Q Consensus 87 ~~~~~~~ 93 (103)
+++++++
T Consensus 113 ~~~~~~~ 119 (120)
T cd03203 113 QELLDLA 119 (120)
T ss_pred HHHHhhh
Confidence 8888764
No 7
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.69 E-value=4.3e-16 Score=89.62 Aligned_cols=77 Identities=23% Similarity=0.487 Sum_probs=64.8
Q ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHh
Q 038064 5 GRRAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKA 82 (103)
Q Consensus 5 ~~~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 82 (103)
++..+.....+.+.+..||+.|++++|++|+++|+||+++++++.++... +.++...+|++++|.+++.++|+++++
T Consensus 30 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~-~~~~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 30 KKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPAL-GIELPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHHc-CCCCcccchHHHHHHHHHHCCHHHHHh
Confidence 34455677889999999999999999999999999999999998655433 444435799999999999999999875
No 8
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.68 E-value=9.2e-16 Score=99.51 Aligned_cols=90 Identities=22% Similarity=0.375 Sum_probs=75.9
Q ss_pred HhHHHHHHHHHHHHHHHhcC------------------CCCcccCCCCcHhHHhHHhHHHHHhH----hcCCcccccCch
Q 038064 8 AGGAKKEFFEALKTLEGQLG------------------DKPFFGGDNFGYLDLSLIPFYYTYET----FGKSSIEAECPK 65 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~------------------~~~~~~G~~~t~aD~~l~~~~~~~~~----~~~~~~~~~~p~ 65 (103)
.+.....+.+.+..||+.|. +++|+.|+++|+|||+++|++.++.. +.++++...+|+
T Consensus 121 ~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~p~ 200 (236)
T TIGR00862 121 NDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIPAEFTG 200 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCccccCch
Confidence 33445568899999999986 46999999999999999999987764 346776688999
Q ss_pred HHHHHHHHHccHHHHHhcCChHHHHHHHHHHH
Q 038064 66 FKAWVKRCLQRETIAKALPDEKKVLEHASGMR 97 (103)
Q Consensus 66 l~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 97 (103)
|.+|++++.++|+|+.+++..+..+..+....
T Consensus 201 l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~~ 232 (236)
T TIGR00862 201 VWRYLSNAYAREEFTNTCPDDKEIELAYADVA 232 (236)
T ss_pred HHHHHHHHhccchHHhhCCChHHHHHHHHHHh
Confidence 99999999999999999999988877776553
No 9
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.67 E-value=5.9e-16 Score=87.16 Aligned_cols=70 Identities=27% Similarity=0.484 Sum_probs=61.3
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCccc-ccCchHHHHHHHHHccH
Q 038064 7 RAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIE-AECPKFKAWVKRCLQRE 77 (103)
Q Consensus 7 ~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~-~~~p~l~~w~~~~~~~p 77 (103)
.++.....+.+.++.+|+.|.+++|++|+++|+||+++++++.++..... ... ..+|+|.+|.+++.++|
T Consensus 25 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~-~~~~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 25 MVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGP-DFLFEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTT-TTTHTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCC-CcccccCHHHHHHHHHHHcCC
Confidence 46777888999999999999999999999999999999999998887643 333 78999999999999998
No 10
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.67 E-value=6.5e-16 Score=89.43 Aligned_cols=74 Identities=23% Similarity=0.372 Sum_probs=63.9
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhc
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKAL 83 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 83 (103)
.+...+.+.+.+..+|+.|++++|++|+++|+||+++++.+.++... +.++ ..+|++.+|+++|.++|++++++
T Consensus 41 ~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~~-~~~~-~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 41 KAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRWAPGV-GLDL-SDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHHHhhc-CCCh-hhChHHHHHHHHHHhCHHhHhhC
Confidence 55667789999999999999889999999999999999999877543 4443 67999999999999999999863
No 11
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.67 E-value=9.5e-16 Score=90.18 Aligned_cols=79 Identities=22% Similarity=0.360 Sum_probs=67.0
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcCCh
Q 038064 7 RAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDE 86 (103)
Q Consensus 7 ~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 86 (103)
........+.+.+..||+.|++++|++|+++|+||+++++++.++....... ...||+|.+|.+++.++|++++++...
T Consensus 32 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~~~~~-~~~~P~l~~~~~rv~~~p~vk~~~~~~ 110 (121)
T cd03209 32 LKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIFEPDC-LDAFPNLKDFLERFEALPKISAYMKSD 110 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHhCccc-cccChHHHHHHHHHHHCHHHHHHHhcc
Confidence 3445667788999999999998899999999999999999998887543322 478999999999999999999987654
No 12
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.66 E-value=9.1e-16 Score=89.38 Aligned_cols=78 Identities=22% Similarity=0.349 Sum_probs=63.6
Q ss_pred HHHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhc
Q 038064 6 RRAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKAL 83 (103)
Q Consensus 6 ~~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 83 (103)
+........+.+.+..||+.|++++|++|+++|+||+++++++.++...........+|+|.+|.+++.++|++++++
T Consensus 41 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 41 AVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYLMATPFAKLFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHHHHccchhhhhcCchHHHHHHHHHhCHHHHhhC
Confidence 334556778999999999999989999999999999999999977653211111367999999999999999998763
No 13
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.65 E-value=1.2e-15 Score=87.23 Aligned_cols=75 Identities=21% Similarity=0.251 Sum_probs=65.3
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcC
Q 038064 7 RAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALP 84 (103)
Q Consensus 7 ~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 84 (103)
........+.+.+..+|+.|++++|++|+++|+||+++++++.++... +. ...+|+|++|++++.++|+++.+..
T Consensus 27 ~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~-~~--~~~~p~l~~w~~~~~~~p~~~~~~~ 101 (103)
T cd03207 27 ARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQF-GL--LPERPAFDAYIARITDRPAFQRAAA 101 (103)
T ss_pred hhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHc-CC--CCCChHHHHHHHHHHcCHHHHHHhc
Confidence 345567789999999999999899999999999999999999887654 32 3679999999999999999998864
No 14
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=4.4e-15 Score=95.24 Aligned_cols=98 Identities=39% Similarity=0.689 Sum_probs=82.9
Q ss_pred chHHHHhHHHHHHHHHHHHHHHhcC-CCCcccCCCCcHhHHhHHhHHHHHhH----hcC--CcccccCchHHHHHHHHHc
Q 038064 3 HKGRRAGGAKKEFFEALKTLEGQLG-DKPFFGGDNFGYLDLSLIPFYYTYET----FGK--SSIEAECPKFKAWVKRCLQ 75 (103)
Q Consensus 3 ~~~~~~~~~~~~~~~~l~~le~~l~-~~~~~~G~~~t~aD~~l~~~~~~~~~----~~~--~~~~~~~p~l~~w~~~~~~ 75 (103)
.+++..+...+++...+..||+.|. +++||+|++++++|++++|++..+.. ..+ +.....+|+|.+|.++|.+
T Consensus 122 ~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~ 201 (231)
T KOG0406|consen 122 KGGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKE 201 (231)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhc
Confidence 3457788888999999999999998 67999999999999999988844322 222 2224779999999999999
Q ss_pred cHHHHHhcCChHHHHHHHHHHHHhh
Q 038064 76 RETIAKALPDEKKVLEHASGMRKNL 100 (103)
Q Consensus 76 ~p~~~~~~~~~~~~~~~~~~~~~~~ 100 (103)
+|+|++++++.++++++++++++..
T Consensus 202 ~~~V~~~~p~~e~~~e~~~~~~~~~ 226 (231)
T KOG0406|consen 202 DEAVKAVLPDSEKVVEFMKKYRQGS 226 (231)
T ss_pred ChhHHhhcCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999864
No 15
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.64 E-value=1.2e-15 Score=88.41 Aligned_cols=76 Identities=18% Similarity=0.385 Sum_probs=65.1
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhc
Q 038064 7 RAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKAL 83 (103)
Q Consensus 7 ~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 83 (103)
..+.....+.+.++.+|+.|++++|++|+++|+||+++++++.+.... +.+....+|++.+|.+++.++|++++++
T Consensus 37 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~-~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 37 AIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRLEWI-GIDDLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHHHhc-cccchhhchHHHHHHHHHhhCHHHHHhc
Confidence 455677889999999999999889999999999999999999887544 3332467999999999999999999875
No 16
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.64 E-value=2e-15 Score=88.22 Aligned_cols=76 Identities=18% Similarity=0.376 Sum_probs=63.8
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhc--CCcccccCchHHHHHHHHHccHHHHHhc
Q 038064 7 RAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFG--KSSIEAECPKFKAWVKRCLQRETIAKAL 83 (103)
Q Consensus 7 ~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~--~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 83 (103)
..+.....+.+.+..+|+.|++++|++|+++|+||+++++++.++.... +.. ...+|+|.+|++++.++|++++++
T Consensus 38 ~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~~~~~~~~~~~-~~~~P~L~~w~~r~~~rpa~~~~~ 115 (115)
T cd03196 38 SEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQFAHVDPKWFD-QSPYPRLRRWLNGFLASPLFSKIM 115 (115)
T ss_pred cHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHHHHHhhhcccC-cccCHHHHHHHHHHHcChHHHhhC
Confidence 3566778899999999999999999999999999999999886654321 222 378999999999999999999863
No 17
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.63 E-value=4.3e-15 Score=87.16 Aligned_cols=75 Identities=23% Similarity=0.336 Sum_probs=63.4
Q ss_pred hHHHHHHHHHHHHHHHhcC--CCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcCC
Q 038064 9 GGAKKEFFEALKTLEGQLG--DKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPD 85 (103)
Q Consensus 9 ~~~~~~~~~~l~~le~~l~--~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 85 (103)
+...+.+.+.+..+|+.|+ .++|++|+++|+||+++++.+.++... ++++ ..+|+|.+|++++.++|+++++.+.
T Consensus 43 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~-~~~~-~~~p~l~~w~~~~~~~p~~~~~~~~ 119 (121)
T cd03191 43 AWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRF-GVDL-SPYPTIARINEACLELPAFQAAHPD 119 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHh-CCCc-ccCcHHHHHHHHHHhChhHHHhCcC
Confidence 3345668899999999997 458999999999999999999877654 4453 7799999999999999999998764
No 18
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.63 E-value=3e-15 Score=88.66 Aligned_cols=78 Identities=24% Similarity=0.330 Sum_probs=64.9
Q ss_pred HhHHHHHHHHHHHHHHHhcCC---CCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcC
Q 038064 8 AGGAKKEFFEALKTLEGQLGD---KPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALP 84 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~---~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 84 (103)
.......+.+.+..||+.|.+ ++|++|+++|+||+++++++.++....+.. ...+|+|.+|+++|.++|+|++++.
T Consensus 33 ~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~~~~~-~~~~P~l~~~~~rv~~~p~v~~~~~ 111 (126)
T cd03210 33 KDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVLAPGC-LDAFPLLKAFVERLSARPKLKAYLE 111 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHhChHh-hhcChHHHHHHHHHHhCcHHHHHHh
Confidence 445566788999999999974 589999999999999999998876543322 4789999999999999999999876
Q ss_pred Ch
Q 038064 85 DE 86 (103)
Q Consensus 85 ~~ 86 (103)
..
T Consensus 112 ~~ 113 (126)
T cd03210 112 SD 113 (126)
T ss_pred Cc
Confidence 54
No 19
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.63 E-value=6e-15 Score=94.13 Aligned_cols=82 Identities=21% Similarity=0.490 Sum_probs=68.7
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCccc-ccCchHHHHHHHHHccHHHHHhcCC
Q 038064 7 RAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIE-AECPKFKAWVKRCLQRETIAKALPD 85 (103)
Q Consensus 7 ~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~-~~~p~l~~w~~~~~~~p~~~~~~~~ 85 (103)
..+.....+.+.+..+|+.|++++|++|+++|+||+++++++.++... ++++. ..+|+|.+|++++.++|+++++++.
T Consensus 124 ~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~~-~~~~~~~~~p~l~~w~~~~~~rp~~~~~~~~ 202 (211)
T PRK09481 124 EADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPVL-GIELSGPGAKELKGYMTRVFERDSFLASLTE 202 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHhc-CCCCCCCCChhHHHHHHHHhccHHHHHHcCH
Confidence 345566778889999999999999999999999999999999777643 44542 5699999999999999999999987
Q ss_pred hHHH
Q 038064 86 EKKV 89 (103)
Q Consensus 86 ~~~~ 89 (103)
.+..
T Consensus 203 ~~~~ 206 (211)
T PRK09481 203 AERE 206 (211)
T ss_pred HHHH
Confidence 6553
No 20
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.62 E-value=3.6e-15 Score=87.24 Aligned_cols=76 Identities=25% Similarity=0.329 Sum_probs=65.1
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcC
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALP 84 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 84 (103)
.+.....+.+.+..+|+.|++++|++|+++|+||+++++++.++....+++. ..+|+|.+|+++|.++|++++...
T Consensus 36 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~~~~~~~-~~~p~l~~w~~~~~~~p~~~~~~~ 111 (118)
T cd03177 36 PEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEALLPLDL-SKYPNVRAWLERLKALPPYEEANG 111 (118)
T ss_pred CHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHHhcCCCh-hhCchHHHHHHHHHcccchHHHHH
Confidence 4456778999999999999888999999999999999999988765234443 679999999999999999998653
No 21
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.62 E-value=7.1e-15 Score=86.77 Aligned_cols=78 Identities=29% Similarity=0.385 Sum_probs=63.8
Q ss_pred HHHHhHHHHHHHHHHHHHHHh-cCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHc--cHHHHH
Q 038064 5 GRRAGGAKKEFFEALKTLEGQ-LGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQ--RETIAK 81 (103)
Q Consensus 5 ~~~~~~~~~~~~~~l~~le~~-l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~--~p~~~~ 81 (103)
++..+...+.+.+.+..+|+. +++++|++|+++|+||+++++.+.+.... +.+....+|+|.+|++++.+ +|++++
T Consensus 40 ~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~~-~~~~~~~~p~l~~w~~~~~~~~~p~~~~ 118 (126)
T cd03183 40 PEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEAA-GYDVFEGRPKLAAWRKRVKEAGNPLFDE 118 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHhc-CCcccccCchHHHHHHHHHHhcchhHHH
Confidence 344556677899999999997 55578999999999999999988776543 44434779999999999999 999998
Q ss_pred hc
Q 038064 82 AL 83 (103)
Q Consensus 82 ~~ 83 (103)
+.
T Consensus 119 ~~ 120 (126)
T cd03183 119 AH 120 (126)
T ss_pred HH
Confidence 64
No 22
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.60 E-value=8.2e-15 Score=88.09 Aligned_cols=72 Identities=22% Similarity=0.257 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHhcC--CCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcCC
Q 038064 13 KEFFEALKTLEGQLG--DKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPD 85 (103)
Q Consensus 13 ~~~~~~l~~le~~l~--~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 85 (103)
..+.+.+..||+.|. +++|++|+++|+||+++++++.++....... ...+|+|.+|++++.++|++++++..
T Consensus 42 ~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~~~~-l~~~P~l~~~~~rv~~~P~vk~~~~~ 115 (137)
T cd03208 42 KAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELDPSL-LSDFPLLQAFKTRISNLPTIKKFLQP 115 (137)
T ss_pred HHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhchhh-hccChHHHHHHHHHHcCHHHHHHHhc
Confidence 356789999999998 6789999999999999999998876543322 47899999999999999999998764
No 23
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.59 E-value=1.1e-14 Score=84.83 Aligned_cols=73 Identities=21% Similarity=0.322 Sum_probs=62.7
Q ss_pred HHHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHH
Q 038064 6 RRAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETI 79 (103)
Q Consensus 6 ~~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 79 (103)
+..+.....+.+.+..+|+.|++++|++|+++|++|+++++++.++... +.++...+|+|.+|.+++.++|++
T Consensus 45 ~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~~-~~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 45 EWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIADITAFVGLDFAKVV-KLRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHhHHHHhc-CCCCccccHHHHHHHHHHHhccCC
Confidence 3456677889999999999999889999999999999999999887654 445446799999999999999974
No 24
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.59 E-value=9e-15 Score=84.96 Aligned_cols=74 Identities=24% Similarity=0.297 Sum_probs=61.2
Q ss_pred HHHHhHHHHHHHHHHHHHHHhcCCC----------CcccCCCCcHhHHhHHhHHHHHhHhcCCcc----cccCchHHHHH
Q 038064 5 GRRAGGAKKEFFEALKTLEGQLGDK----------PFFGGDNFGYLDLSLIPFYYTYETFGKSSI----EAECPKFKAWV 70 (103)
Q Consensus 5 ~~~~~~~~~~~~~~l~~le~~l~~~----------~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~----~~~~p~l~~w~ 70 (103)
.+..+.....+...+..||+.|.++ +|++|+++|+||+++++++.++... +++. ...+|+|.+|+
T Consensus 24 ~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~-~~~~~~~~~~~~P~l~~w~ 102 (111)
T cd03204 24 VEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFL-GLSRRYWGNGKRPNLEAYF 102 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHc-CccccccccccChHHHHHH
Confidence 3445677888999999999999754 4999999999999999999888653 3332 25799999999
Q ss_pred HHHHccHHH
Q 038064 71 KRCLQRETI 79 (103)
Q Consensus 71 ~~~~~~p~~ 79 (103)
++|.++|+|
T Consensus 103 ~rv~aRpsf 111 (111)
T cd03204 103 ERVLQRESF 111 (111)
T ss_pred HHHHcCCCC
Confidence 999999975
No 25
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.58 E-value=1.5e-14 Score=77.16 Aligned_cols=67 Identities=30% Similarity=0.557 Sum_probs=56.1
Q ss_pred HHHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhc-CCcccccCchHHHHHHH
Q 038064 6 RRAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFG-KSSIEAECPKFKAWVKR 72 (103)
Q Consensus 6 ~~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~-~~~~~~~~p~l~~w~~~ 72 (103)
...+...+.+.+.++.||..|.+++|++|+++|++|++++|++.++.... ..++...+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 45677889999999999999999999999999999999999998887653 23345789999999986
No 26
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.57 E-value=2.1e-14 Score=82.57 Aligned_cols=70 Identities=20% Similarity=0.412 Sum_probs=58.4
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHH
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETI 79 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 79 (103)
.+...+.+.+.++.+|+.|++++|++|+++|+||+++++++...... +.. ...+|+|.+|.+++.++|+|
T Consensus 41 ~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~~-~~~-~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 41 IAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAYRWFEL-PIE-RPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHHHHHHc-ccc-cccCchHHHHHHHHHhCCCC
Confidence 44567789999999999999889999999999999999998433322 223 47899999999999999975
No 27
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.57 E-value=1.2e-14 Score=92.41 Aligned_cols=76 Identities=24% Similarity=0.273 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHhcCCC--CcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcCCh
Q 038064 10 GAKKEFFEALKTLEGQLGDK--PFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDE 86 (103)
Q Consensus 10 ~~~~~~~~~l~~le~~l~~~--~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 86 (103)
...+.+.+.+..+|+.|+++ +|++|+++|+||+++++++.++....+.++ ..||+|.+|.+++.++|++++++.+.
T Consensus 123 ~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~~~~~l-~~~P~l~~~~~r~~~~P~~k~y~~~~ 200 (205)
T PTZ00057 123 FLNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETKYPNSL-KNFPLLKAHNEFISNLPNIKNYISNR 200 (205)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHhChhhh-ccChhHHHHHHHHHhChHHHHHHHhC
Confidence 34567889999999999753 899999999999999999877654334443 78999999999999999999987543
No 28
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.56 E-value=2.1e-14 Score=90.71 Aligned_cols=75 Identities=17% Similarity=0.271 Sum_probs=64.7
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcCC
Q 038064 9 GGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPD 85 (103)
Q Consensus 9 ~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 85 (103)
....+.+.+.+..+|+.|++++|++|+++|+||+++++++.+.... +.++ ..+|+|.+|++++.++|++++++..
T Consensus 123 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~-~~~~-~~~p~l~~w~~~~~~~p~~k~~~~~ 197 (201)
T PRK10542 123 PTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAV-KLNL-EGLEHIAAYMQRVAERPAVAAALKA 197 (201)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhcc-CCCc-ccchHHHHHHHHHHcCHHHHHHHHH
Confidence 4456778899999999999899999999999999999999887544 4453 6799999999999999999998754
No 29
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.55 E-value=4.5e-14 Score=89.71 Aligned_cols=76 Identities=21% Similarity=0.290 Sum_probs=64.2
Q ss_pred hHHHHHHHHHHHHHHHhcCC--CCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcCCh
Q 038064 9 GGAKKEFFEALKTLEGQLGD--KPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDE 86 (103)
Q Consensus 9 ~~~~~~~~~~l~~le~~l~~--~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 86 (103)
+...+.+.+.++.+|+.|.+ ++|++|+++|+||+++++++.++..+ +.++ ..||+|++|+++|.++|+++++....
T Consensus 128 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~-~~~~-~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 128 RWYQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERF-GVDL-TPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHc-CCCc-ccchHHHHHHHHHhcCHHHHHhCccc
Confidence 33455688999999999985 46999999999999999999887644 4443 77999999999999999999998754
No 30
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.55 E-value=3.1e-14 Score=83.57 Aligned_cols=81 Identities=15% Similarity=0.246 Sum_probs=66.8
Q ss_pred HHHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhc-CCcccccCchHHHHHHHHHccHHHHHhcC
Q 038064 6 RRAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFG-KSSIEAECPKFKAWVKRCLQRETIAKALP 84 (103)
Q Consensus 6 ~~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~-~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 84 (103)
+..+.....+.+.++.+|+.|++++|+.|+++|+||+++++.+.++.... +......+|++.+|.+++.++|+|+++++
T Consensus 36 ~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 115 (123)
T cd03181 36 KSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLGFTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAVFG 115 (123)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHHHHHHcCHHHHHhChHHHHHHHHHHcCHHHHHHcC
Confidence 34566778899999999999998999999999999999999997764321 21123579999999999999999999876
Q ss_pred Ch
Q 038064 85 DE 86 (103)
Q Consensus 85 ~~ 86 (103)
..
T Consensus 116 ~~ 117 (123)
T cd03181 116 EV 117 (123)
T ss_pred CC
Confidence 54
No 31
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.55 E-value=4e-14 Score=82.67 Aligned_cols=68 Identities=24% Similarity=0.250 Sum_probs=58.3
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccH
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRE 77 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 77 (103)
.+.....+.+.+..||+.|++++|++|+++|+||+++++.+.++... +.. ...+|+|.+|++++.++|
T Consensus 52 ~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~-~~~-~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 52 AGFINPELKKHLDFLEDRLAKKGYFVGDKLTAADIMMSFPLEAALAR-GPL-LEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHHHhHHHHHHHHHHHHHHccCCCCCCCCCCHHHHHHHHHHHHHHHc-Ccc-cccCchHHHHHHHHhcCC
Confidence 44556689999999999999999999999999999999999887654 333 478999999999999986
No 32
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.55 E-value=3.3e-14 Score=90.85 Aligned_cols=77 Identities=22% Similarity=0.396 Sum_probs=62.9
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcCCh
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDE 86 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 86 (103)
.+.....+.+.+..||++|.+++|++|+++|+||+++++++...... +.+ ...||+|.+|+++|.++|+|+++....
T Consensus 130 ~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~-~~~-~~~~P~l~~w~~r~~~rp~~~~~~~~~ 206 (215)
T PRK13972 130 IERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQ-RID-LAMYPAVKNWHERIRSRPATGQALLKA 206 (215)
T ss_pred HHHHHHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhhc-CCc-chhCHHHHHHHHHHHhCHHHHHHHHHh
Confidence 34455678889999999999889999999999999999887433322 444 377999999999999999999886543
No 33
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.54 E-value=3.9e-14 Score=80.65 Aligned_cols=70 Identities=19% Similarity=0.324 Sum_probs=59.6
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHH
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETI 79 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 79 (103)
.+....++.+.+..+|+.|++++|+.|+++|+||+++++++.+... .+.. ...+|+|.+|.+++.++|++
T Consensus 31 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~-~~~~-~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 31 KETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPE-GGVD-LEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhc-cCCC-hhhCcHHHHHHHHHHhCcCC
Confidence 4556788999999999999999999999999999999999876543 2333 36799999999999999974
No 34
>PLN02473 glutathione S-transferase
Probab=99.53 E-value=5.2e-14 Score=89.79 Aligned_cols=77 Identities=21% Similarity=0.313 Sum_probs=63.3
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcC-CcccccCchHHHHHHHHHccHHHHHhcC
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGK-SSIEAECPKFKAWVKRCLQRETIAKALP 84 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~-~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 84 (103)
.+.....+.+.++.+|+.|++++|++|+++|+||+++++.+.+...... ..+...+|+|.+|++++.++|+++++..
T Consensus 133 ~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~~ 210 (214)
T PLN02473 133 VEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLME 210 (214)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhcChhhHHHHH
Confidence 3445677888999999999988999999999999999999977643212 1224679999999999999999999864
No 35
>PLN02395 glutathione S-transferase
Probab=99.53 E-value=7.5e-14 Score=89.04 Aligned_cols=78 Identities=17% Similarity=0.252 Sum_probs=63.1
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcC-CcccccCchHHHHHHHHHccHHHHHhcCC
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGK-SSIEAECPKFKAWVKRCLQRETIAKALPD 85 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~-~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 85 (103)
.....+.+.+.++.||+.|++++|++|+++|+||+++++++.++....+ ......+|+|.+|++++.++|++++++..
T Consensus 132 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~~~ 210 (215)
T PLN02395 132 IKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRPAWKEVLAK 210 (215)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHcChHHHHHHHH
Confidence 3445677889999999999988999999999999999998876632111 11136799999999999999999998643
No 36
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.51 E-value=1.4e-13 Score=81.46 Aligned_cols=69 Identities=25% Similarity=0.379 Sum_probs=58.8
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHcc
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQR 76 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~ 76 (103)
.+...+.+.+.++.+|+.|++++|+.|+++|+||+++++++.+.....+.++...+|++.+|++||.++
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~~~~~~~~~p~l~~W~~r~~~~ 124 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVSPFPLLEEDDPVYDWFERCLDL 124 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcCcccccccCChHHHHHHHHhcC
Confidence 346677899999999999999999999999999999999998887644455447899999999999763
No 37
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.50 E-value=2.8e-13 Score=89.38 Aligned_cols=82 Identities=22% Similarity=0.399 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHhcCC-CCcccCCCCcHhHHhHHhHHHHHhH----hcCCcccccCchHHHHHHHHHccHHHHHhcCChH
Q 038064 13 KEFFEALKTLEGQLGD-KPFFGGDNFGYLDLSLIPFYYTYET----FGKSSIEAECPKFKAWVKRCLQRETIAKALPDEK 87 (103)
Q Consensus 13 ~~~~~~l~~le~~l~~-~~~~~G~~~t~aD~~l~~~~~~~~~----~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 87 (103)
+.+.+.+..||+.|.+ ++|++|+++|+||++++|.+.++.. +.++++...+|+|.+|++++.++|+|+.+.+..+
T Consensus 174 ~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~~~~ 253 (265)
T PLN02817 174 QALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRALPE 253 (265)
T ss_pred HHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCCCHH
Confidence 4677889999999974 6999999999999999999876643 2234444779999999999999999999998876
Q ss_pred HHHHHHH
Q 038064 88 KVLEHAS 94 (103)
Q Consensus 88 ~~~~~~~ 94 (103)
..++-++
T Consensus 254 ~~~~~~~ 260 (265)
T PLN02817 254 DVIAGWR 260 (265)
T ss_pred HHHHHhH
Confidence 6655444
No 38
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.48 E-value=2.6e-13 Score=79.16 Aligned_cols=72 Identities=14% Similarity=0.157 Sum_probs=61.5
Q ss_pred HhHHHHHHHHHHHHHHHhcC-CCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcC
Q 038064 8 AGGAKKEFFEALKTLEGQLG-DKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALP 84 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~-~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 84 (103)
.+.....+.+.+..+|..++ +++|++| ++|+||+++++++.|+... +.++ . |++.+|.+|+.++|+|++.++
T Consensus 40 ~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~~-g~~l-~--p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 40 SEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRLVLN-GDPV-P--ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHHHHc-CCCC-C--HHHHHHHHHHHCCHHHHHHHh
Confidence 45667778899999999995 4589999 5999999999999999876 6564 3 999999999999999999764
No 39
>PLN02378 glutathione S-transferase DHAR1
Probab=99.48 E-value=2.5e-13 Score=86.89 Aligned_cols=81 Identities=27% Similarity=0.509 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHhcC--CCCcccCCCCcHhHHhHHhHHHHHhH----hcCCcccccCchHHHHHHHHHccHHHHHhcC
Q 038064 11 AKKEFFEALKTLEGQLG--DKPFFGGDNFGYLDLSLIPFYYTYET----FGKSSIEAECPKFKAWVKRCLQRETIAKALP 84 (103)
Q Consensus 11 ~~~~~~~~l~~le~~l~--~~~~~~G~~~t~aD~~l~~~~~~~~~----~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 84 (103)
....+.+.+..+|+.|. +++|++|+++|+||++++|++.++.. +..++....+|+|.+|+++|.++|+++++++
T Consensus 119 ~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~~ 198 (213)
T PLN02378 119 SEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKT 198 (213)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeecccC
Confidence 34567788999999997 46999999999999999999876542 2223334679999999999999999999998
Q ss_pred ChHHHHH
Q 038064 85 DEKKVLE 91 (103)
Q Consensus 85 ~~~~~~~ 91 (103)
.+...+.
T Consensus 199 ~~~~~~~ 205 (213)
T PLN02378 199 EEKYVIS 205 (213)
T ss_pred ChHHHHH
Confidence 8766443
No 40
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.47 E-value=8.6e-13 Score=77.01 Aligned_cols=71 Identities=18% Similarity=0.312 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHHHHHHhc---CCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcC
Q 038064 9 GGAKKEFFEALKTLEGQL---GDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALP 84 (103)
Q Consensus 9 ~~~~~~~~~~l~~le~~l---~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 84 (103)
+...+.+.+.+..+|..+ ++++|++|+ +|+||+++++++.++... +.+. .|+|++|++++.++|++++.+.
T Consensus 40 ~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~-~~~~---~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 40 EAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTY-GLPL---SPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHc-CCCC---CHHHHHHHHHHHCCHHHHHHHh
Confidence 344455556666666655 467899999 999999999999888654 4342 3999999999999999998763
No 41
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.46 E-value=6.6e-13 Score=84.02 Aligned_cols=78 Identities=18% Similarity=0.196 Sum_probs=64.0
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhc-CCcccccCchHHHHHHHHHccHHHHHhcCCh
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFG-KSSIEAECPKFKAWVKRCLQRETIAKALPDE 86 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~-~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 86 (103)
.+.....+.+.+..||++|.+++ ++|+++|+||+++++.+.++.... ...+...+|++.+|++++.++|+++++.++.
T Consensus 123 ~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp~~~~~~~~~ 201 (202)
T PRK10357 123 LLRQREKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESFARTEPPK 201 (202)
T ss_pred HHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhcccCcchhhcChHHHHHHHHHhcChhhhhcCCCC
Confidence 34566788999999999998878 999999999999999998775421 1122367999999999999999999988753
No 42
>PRK11752 putative S-transferase; Provisional
Probab=99.43 E-value=1.1e-12 Score=86.48 Aligned_cols=76 Identities=17% Similarity=0.293 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHh---c---CCcccccCchHHHHHHHHHccHHHHHh
Q 038064 9 GGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETF---G---KSSIEAECPKFKAWVKRCLQRETIAKA 82 (103)
Q Consensus 9 ~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~---~---~~~~~~~~p~l~~w~~~~~~~p~~~~~ 82 (103)
+.....+.+.++.+|+.|++++|++|+++|+||+++++++.++... . ..+ ...||+|.+|+++|.++|+++++
T Consensus 177 ~~~~~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~-~~~~P~L~~w~~rv~~rPs~k~~ 255 (264)
T PRK11752 177 NRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLD-VGSYKHVQRWAKEIAERPAVKRG 255 (264)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccC-cccCHHHHHHHHHHHhCHHHHHH
Confidence 3445567889999999999889999999999999999988665321 1 112 36799999999999999999998
Q ss_pred cCC
Q 038064 83 LPD 85 (103)
Q Consensus 83 ~~~ 85 (103)
+..
T Consensus 256 ~~~ 258 (264)
T PRK11752 256 RIV 258 (264)
T ss_pred Hhc
Confidence 654
No 43
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.42 E-value=1.1e-12 Score=74.87 Aligned_cols=68 Identities=22% Similarity=0.319 Sum_probs=57.3
Q ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHH
Q 038064 5 GRRAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCL 74 (103)
Q Consensus 5 ~~~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~ 74 (103)
++..+.....+.+.++.||..|++++|++|+++|+||+++++++.++... +.+ ...+|+|.+|.++++
T Consensus 38 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~~~~~-~~~-~~~~p~l~~~~~~~~ 105 (105)
T cd03179 38 AEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHVADEG-GFD-LADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHhcccc-CCC-hHhCccHHHHHHhhC
Confidence 34456678889999999999998889999999999999999999887643 444 367999999999873
No 44
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.39 E-value=2.8e-12 Score=71.40 Aligned_cols=67 Identities=27% Similarity=0.265 Sum_probs=54.1
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhc-CCc----ccccCchHHHHHHHHH
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFG-KSS----IEAECPKFKAWVKRCL 74 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~-~~~----~~~~~p~l~~w~~~~~ 74 (103)
.......+.+.++.+|+.|++++|++|+++|+||+++++++.++.... +.. ....+|+|++|++++.
T Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 17 TREIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 445677889999999999999999999999999999999998775421 110 1257999999999873
No 45
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.37 E-value=4.1e-12 Score=71.38 Aligned_cols=69 Identities=29% Similarity=0.546 Sum_probs=57.2
Q ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCc-ccccCchHHHHHHHH
Q 038064 5 GRRAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSS-IEAECPKFKAWVKRC 73 (103)
Q Consensus 5 ~~~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~-~~~~~p~l~~w~~~~ 73 (103)
++..+...+.+.+.++.||+.|++++|++|+++|+||+++++++.++....... ....+|++.+|++++
T Consensus 31 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 31 EAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhhhhccCccHHHHHHhC
Confidence 445667788899999999999999999999999999999999998887653211 136799999999874
No 46
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.36 E-value=1.8e-12 Score=74.04 Aligned_cols=69 Identities=22% Similarity=0.263 Sum_probs=56.5
Q ss_pred HHHHhHHHHHHHHHHHHHHHhcCC--CCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHH
Q 038064 5 GRRAGGAKKEFFEALKTLEGQLGD--KPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRC 73 (103)
Q Consensus 5 ~~~~~~~~~~~~~~l~~le~~l~~--~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~ 73 (103)
++......+.+.+.+..||+.|++ ++|++|+++|+||+++++++.++.......+...+|+|.+|.+++
T Consensus 34 ~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 34 EKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYLDPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhhCchhhHHhChhHHHHHHhC
Confidence 445666778889999999999977 799999999999999999998886553322136799999999874
No 47
>PRK10387 glutaredoxin 2; Provisional
Probab=99.32 E-value=3.4e-12 Score=81.09 Aligned_cols=66 Identities=15% Similarity=0.200 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHH
Q 038064 10 GAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETI 79 (103)
Q Consensus 10 ~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 79 (103)
...+.+.+.++.+|+.|++ +|++|+++|+||+++++++.++....+.+ .+|+|.+|++||.++|++
T Consensus 142 ~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~~~~---~~p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 142 GLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVKGIE---WPPRVADYRDNMSKKTQV 207 (210)
T ss_pred HHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeecCCC---CCHHHHHHHHHHHHHhCC
Confidence 4567889999999999987 99999999999999999998886543322 369999999999999975
No 48
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.31 E-value=3.2e-12 Score=72.65 Aligned_cols=65 Identities=23% Similarity=0.413 Sum_probs=51.0
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCC--cccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHc
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKP--FFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQ 75 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~--~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 75 (103)
.....+.+.+.+..+++.|+++. |++|+++|+||+++++.+..+.. . .++..+|+|.+|++||.+
T Consensus 33 ~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~--~-~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 33 GDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRW--A-DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHC--C-HHTTTCHHHHHHHHHHHT
T ss_pred HHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhh--c-ccccccHHHHHHHHhhcC
Confidence 45567788999999999998766 99999999999999998855542 2 322589999999999874
No 49
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.30 E-value=1.9e-11 Score=77.90 Aligned_cols=74 Identities=30% Similarity=0.562 Sum_probs=63.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHH
Q 038064 5 GRRAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIA 80 (103)
Q Consensus 5 ~~~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~ 80 (103)
.+........+.+.++.+|..|.+++|++|+++|+||+++++.+.++... +.++ ..+|++.+|++++.++|+++
T Consensus 126 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~~-~~~~-~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 126 EAALEAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLALL-GEEL-ADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhhc-Cccc-ccChHHHHHHHHHHcCCchh
Confidence 34456677889999999999999999999999999999999999886654 4443 77999999999999999965
No 50
>PRK15113 glutathione S-transferase; Provisional
Probab=99.29 E-value=1.4e-11 Score=78.75 Aligned_cols=75 Identities=13% Similarity=0.129 Sum_probs=60.8
Q ss_pred HhHHHHHHHHHHHHHHHhcCC-CCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcCCh
Q 038064 8 AGGAKKEFFEALKTLEGQLGD-KPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDE 86 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~-~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 86 (103)
.+...+.+.+.+..+|+.|++ +.|++|+ +|+||+++++++.++... +.++ .|+|.+|.+++.++|+|+++....
T Consensus 135 ~~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~~-~~~~---~p~l~~~~~r~~~rp~~~~~~~~~ 209 (214)
T PRK15113 135 SEAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVLH-GDEV---PERLADYATFQWQRASVQRWLALS 209 (214)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHHc-CCCC---CHHHHHHHHHHhcCHHHHHHHHHh
Confidence 344667788999999999975 4799996 999999999999877643 3332 299999999999999999987654
Q ss_pred H
Q 038064 87 K 87 (103)
Q Consensus 87 ~ 87 (103)
.
T Consensus 210 ~ 210 (214)
T PRK15113 210 A 210 (214)
T ss_pred h
Confidence 3
No 51
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.27 E-value=2.7e-11 Score=68.69 Aligned_cols=58 Identities=24% Similarity=0.397 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHc
Q 038064 13 KEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQ 75 (103)
Q Consensus 13 ~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 75 (103)
....+.+..+|++|++++|++|+++|+||+++++++.+. +.. ...+|++.+|+++|.+
T Consensus 38 ~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~~~----~~~-~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 38 KEKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALLQT----GLA-SAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHHHc----ccc-cccChHHHHHHHHHHh
Confidence 355678899999999999999999999999999888643 223 2679999999999975
No 52
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.17 E-value=1.6e-10 Score=65.50 Aligned_cols=66 Identities=20% Similarity=0.247 Sum_probs=53.3
Q ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHh-cCCcccccCchHHHHHHHH
Q 038064 5 GRRAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETF-GKSSIEAECPKFKAWVKRC 73 (103)
Q Consensus 5 ~~~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~-~~~~~~~~~p~l~~w~~~~ 73 (103)
++..+.....+.+.+..+|+.|++++| +++|+||+++++.+.+.... .+.+....+|+|.+|.++|
T Consensus 32 ~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 32 QPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHccCcchhhhChHHHHHHHhC
Confidence 344666778899999999999988888 89999999999999888642 2333246799999999875
No 53
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.16 E-value=8.4e-11 Score=69.77 Aligned_cols=67 Identities=21% Similarity=0.242 Sum_probs=52.9
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHh-c---CCc-ccccCchHHHHHHHHH
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETF-G---KSS-IEAECPKFKAWVKRCL 74 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~-~---~~~-~~~~~p~l~~w~~~~~ 74 (103)
.++....+.+.++.|+..|++++||+|+++|.+|+++++++.++... . +.. ....+|+|.+|++||.
T Consensus 55 ~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 55 LDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhcC
Confidence 45566778899999999999999999999999999999998655422 1 111 1367999999999973
No 54
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=99.16 E-value=2.3e-10 Score=68.82 Aligned_cols=69 Identities=22% Similarity=0.297 Sum_probs=54.7
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHh-cC-Cc---ccccCchHHHHHHHHHc
Q 038064 7 RAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETF-GK-SS---IEAECPKFKAWVKRCLQ 75 (103)
Q Consensus 7 ~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~-~~-~~---~~~~~p~l~~w~~~~~~ 75 (103)
..++......+.+..|++.|++++||+|+++|.+|+++++++..+... .+ .. ....+|+|.+|++||.+
T Consensus 61 ~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 61 VEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 355567778889999999999999999999999999999998655421 11 11 13679999999999874
No 55
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=99.13 E-value=3.4e-10 Score=68.64 Aligned_cols=48 Identities=23% Similarity=0.344 Sum_probs=42.0
Q ss_pred CCCCcccCCCCcHhHHhHHhHHHHHhHhcCC-cccccCchHHHHHHHHHc
Q 038064 27 GDKPFFGGDNFGYLDLSLIPFYYTYETFGKS-SIEAECPKFKAWVKRCLQ 75 (103)
Q Consensus 27 ~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~-~~~~~~p~l~~w~~~~~~ 75 (103)
.+++|++|+++|+||+++++++..+....++ ++ ..+|++.+|++||.+
T Consensus 97 ~~~~FlaGd~ptIADisvyg~l~s~e~~~~~~Dl-~~~p~I~~W~eRm~~ 145 (149)
T cd03197 97 KDRQFHGGSKPNLADLAVYGVLRSVEGHPAFKDM-VEETKIGEWYERMDA 145 (149)
T ss_pred CCCCccCCCCCCHHHHHHHHHHHHHHHhccccch-hhCcCHHHHHHHHHH
Confidence 4568999999999999999999888876566 64 789999999999975
No 56
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.12 E-value=8.4e-10 Score=71.89 Aligned_cols=81 Identities=20% Similarity=0.248 Sum_probs=65.1
Q ss_pred HhHHHHHHHHHHHHHHHhcCC----CCcccCCCCcHhHHhHHhHHHHHhHhcC--Ccc-cccCchHHHHHHHHHccHHHH
Q 038064 8 AGGAKKEFFEALKTLEGQLGD----KPFFGGDNFGYLDLSLIPFYYTYETFGK--SSI-EAECPKFKAWVKRCLQRETIA 80 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~----~~~~~G~~~t~aD~~l~~~~~~~~~~~~--~~~-~~~~p~l~~w~~~~~~~p~~~ 80 (103)
..+..+.+...++.+|..|.+ ..|++|+.+|+||+++++.++++...+- -.| ....|+|..|+.|+..|++|+
T Consensus 203 lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsrpnle~Yf~rvrrR~sf~ 282 (325)
T KOG4420|consen 203 LKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYWEDGSRPNLESYFERVRRRFSFR 282 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhcccCCCccHHHHHHHHHhhhHHH
Confidence 445666777888888888876 5799999999999999999998876521 111 257899999999999999999
Q ss_pred HhcCChHH
Q 038064 81 KALPDEKK 88 (103)
Q Consensus 81 ~~~~~~~~ 88 (103)
+++..--.
T Consensus 283 kvlg~~fn 290 (325)
T KOG4420|consen 283 KVLGDIFN 290 (325)
T ss_pred HhhhhHHH
Confidence 99876544
No 57
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.09 E-value=7e-10 Score=70.07 Aligned_cols=89 Identities=19% Similarity=0.368 Sum_probs=73.9
Q ss_pred HHhHHHHHHHHHHHHHHHhcCC---CCcccCCCCcHhHHhHHhHHHHH----hHhcCCcccccCchHHHHHHHHHccHHH
Q 038064 7 RAGGAKKEFFEALKTLEGQLGD---KPFFGGDNFGYLDLSLIPFYYTY----ETFGKSSIEAECPKFKAWVKRCLQRETI 79 (103)
Q Consensus 7 ~~~~~~~~~~~~l~~le~~l~~---~~~~~G~~~t~aD~~l~~~~~~~----~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 79 (103)
.-+.....+.+.+..|++.|.. ++|+.||++|.+|+.++|=++.+ .++..+++++.++++.+|+..+.++.+|
T Consensus 120 ~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~F 199 (221)
T KOG1422|consen 120 ANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDEF 199 (221)
T ss_pred ccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHHh
Confidence 3344456777888999999974 79999999999999999988654 4456778788999999999999999999
Q ss_pred HHhcCChHHHHHHHHH
Q 038064 80 AKALPDEKKVLEHASG 95 (103)
Q Consensus 80 ~~~~~~~~~~~~~~~~ 95 (103)
..+++.....+..+..
T Consensus 200 ~~tcp~d~ei~~~y~~ 215 (221)
T KOG1422|consen 200 TNTCPADQEIILAYAP 215 (221)
T ss_pred hcCCchHHHHHHhhhh
Confidence 9999998877666553
No 58
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=1e-09 Score=71.04 Aligned_cols=82 Identities=22% Similarity=0.325 Sum_probs=66.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHh-HhcCCcccccCchHHHHHHHHHccHHHHHhc
Q 038064 5 GRRAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYE-TFGKSSIEAECPKFKAWVKRCLQRETIAKAL 83 (103)
Q Consensus 5 ~~~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~-~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 83 (103)
.........++.+.++.+|.+|.++.|+.|+++|+||+.+++.+..+. ..........+|++.+|++++.++|+.++..
T Consensus 128 ~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P~~~e~~ 207 (226)
T KOG0867|consen 128 PTAVKELEAKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQKRPAYEEAN 207 (226)
T ss_pred chhhHHHHHHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhCccHHHHH
Confidence 344566778899999999999999999999999999999999997763 2221222578999999999999999988866
Q ss_pred CCh
Q 038064 84 PDE 86 (103)
Q Consensus 84 ~~~ 86 (103)
...
T Consensus 208 ~~~ 210 (226)
T KOG0867|consen 208 EKG 210 (226)
T ss_pred HHH
Confidence 543
No 59
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.06 E-value=2.4e-10 Score=73.00 Aligned_cols=66 Identities=12% Similarity=0.253 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCc-hHHHHHHHHHccHHH
Q 038064 9 GGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECP-KFKAWVKRCLQRETI 79 (103)
Q Consensus 9 ~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p-~l~~w~~~~~~~p~~ 79 (103)
+.....+.+.++.+|++|++++|++| ++|+||+++++++.++....+. ++| +|.+|++||.+++.+
T Consensus 140 ~~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~~~----~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 140 PGLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVAGI----NWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeecCC----CCChHHHHHHHHHHHHhCC
Confidence 34567788999999999999999954 6999999999999887654332 256 999999999998865
No 60
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=1.7e-10 Score=75.61 Aligned_cols=95 Identities=19% Similarity=0.292 Sum_probs=77.8
Q ss_pred CCchHHHHhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhc----CCcc--cccCchHHHHHHHHH
Q 038064 1 MDHKGRRAGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFG----KSSI--EAECPKFKAWVKRCL 74 (103)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~----~~~~--~~~~p~l~~w~~~~~ 74 (103)
|+...+..++....+...|+.||+.|+++.|++||++|-||+-+++.+-+++... .+++ ..+||+|..|+..+.
T Consensus 196 FA~tq~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LY 275 (324)
T COG0435 196 FATTQEAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLY 275 (324)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHh
Confidence 5667788888999999999999999999999999999999999999986664321 2222 467999999999999
Q ss_pred ccHHHHHhcCChHHHHHHHHH
Q 038064 75 QRETIAKALPDEKKVLEHASG 95 (103)
Q Consensus 75 ~~p~~~~~~~~~~~~~~~~~~ 95 (103)
+.|.|..+..-.+.-..|+.+
T Consensus 276 q~pg~~~T~df~hIK~hYyrS 296 (324)
T COG0435 276 QLPGFAETVDFDHIKLHYYRS 296 (324)
T ss_pred cCcccccccchhHhhhhheec
Confidence 999999998766555555443
No 61
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.03 E-value=8.8e-10 Score=70.24 Aligned_cols=75 Identities=27% Similarity=0.263 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHhcC--CCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcCC
Q 038064 11 AKKEFFEALKTLEGQLG--DKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPD 85 (103)
Q Consensus 11 ~~~~~~~~l~~le~~l~--~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 85 (103)
......+.+..+++.|. +++|++||++|+||++++..+..+...........+|+|+++.+++.++|.+++++.+
T Consensus 124 ~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~~~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~ 200 (206)
T KOG1695|consen 124 YLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEELLDPSALDHFPKLKAFKERVSSIPNIKKYLES 200 (206)
T ss_pred hccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHhcCchhhccChHHHHHHHHHhcCchHHHHHhc
Confidence 44466788889999887 4479999999999999999998887742223346789999999999999999998754
No 62
>PLN02907 glutamate-tRNA ligase
Probab=99.01 E-value=1e-09 Score=80.81 Aligned_cols=65 Identities=14% Similarity=0.222 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHh-HhcCCcccccCchHHHHHHHHHccHH
Q 038064 14 EFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYE-TFGKSSIEAECPKFKAWVKRCLQRET 78 (103)
Q Consensus 14 ~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~-~~~~~~~~~~~p~l~~w~~~~~~~p~ 78 (103)
.+.+.++.||++|.+++|++|+++|+||+++++.+.... ..........+|+|.+|+++|.++|+
T Consensus 94 ~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 94 EFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCCC
Confidence 456778999999999999999999999999998885541 11122223679999999999999999
No 63
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.93 E-value=2.8e-09 Score=66.08 Aligned_cols=77 Identities=21% Similarity=0.273 Sum_probs=66.3
Q ss_pred HhHHHHHHHHHHHHHHHhcCC--CCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcCC
Q 038064 8 AGGAKKEFFEALKTLEGQLGD--KPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPD 85 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~--~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 85 (103)
...+..-+.++|..||+.|.. |.|-+||++|+||+++.|.+.....+ ..++ ..||.+.+..+.+.++|.|+.+-+.
T Consensus 130 ~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~rf-~vdl-~PYPti~ri~e~l~elpaFq~ahP~ 207 (217)
T KOG0868|consen 130 DQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANRF-HVDL-TPYPTITRINEELAELPAFQAAHPD 207 (217)
T ss_pred hHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhhc-cccC-CcCchHHHHHHHHHhCHHHHhcCCC
Confidence 455677789999999999964 68999999999999999999877554 5675 8899999999999999999988765
Q ss_pred h
Q 038064 86 E 86 (103)
Q Consensus 86 ~ 86 (103)
.
T Consensus 208 n 208 (217)
T KOG0868|consen 208 N 208 (217)
T ss_pred C
Confidence 3
No 64
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.80 E-value=2.5e-09 Score=69.68 Aligned_cols=94 Identities=20% Similarity=0.284 Sum_probs=74.1
Q ss_pred CCchHHHHhHHHHHHHHHHHHHHHhcCCCC--cccCCCCcHhHHhHHhHHHHHhHhc----CCcc---cccCchHHHHHH
Q 038064 1 MDHKGRRAGGAKKEFFEALKTLEGQLGDKP--FFGGDNFGYLDLSLIPFYYTYETFG----KSSI---EAECPKFKAWVK 71 (103)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~l~~le~~l~~~~--~~~G~~~t~aD~~l~~~~~~~~~~~----~~~~---~~~~p~l~~w~~ 71 (103)
|+.+.+..+.....+.+.|+.+|+.|+.+. |++|+++|-||+.+++.+-+.+... .++. ...||+|..|..
T Consensus 194 FA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk 273 (319)
T KOG2903|consen 194 FAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLK 273 (319)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHHH
Confidence 456677788888999999999999998875 8999999999999999884443221 2221 358999999999
Q ss_pred HHHc-cHHHHHhcCChHHHHHHHH
Q 038064 72 RCLQ-RETIAKALPDEKKVLEHAS 94 (103)
Q Consensus 72 ~~~~-~p~~~~~~~~~~~~~~~~~ 94 (103)
.+.. .|.|..+..-.+....|++
T Consensus 274 ~iY~~~~~~~~Ttd~~hIk~~Y~~ 297 (319)
T KOG2903|consen 274 NIYWNIPGFSSTTDFNHIKLHYYR 297 (319)
T ss_pred HHHhhccchhhccchhHHhhhhcc
Confidence 9997 9999999876665555554
No 65
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.70 E-value=1.6e-07 Score=54.40 Aligned_cols=72 Identities=18% Similarity=0.247 Sum_probs=52.8
Q ss_pred hHHHHHHHHHHHHHHHhcCC-CCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcCC
Q 038064 9 GGAKKEFFEALKTLEGQLGD-KPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPD 85 (103)
Q Consensus 9 ~~~~~~~~~~l~~le~~l~~-~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 85 (103)
+.....+.+.+...+..|.+ ++|++|+ .|+||..+++++.++..+ |.++ -+.+..|.++..++|+|++.++-
T Consensus 42 ~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ml~Rl~~~-gd~v---P~~l~~Ya~~qwqrpsVQ~Wla~ 114 (117)
T PF14834_consen 42 EAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADADLALMLNRLVTY-GDPV---PERLADYAERQWQRPSVQRWLAL 114 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHHHHHHHHTT-T-------HHHHHHHHHHHT-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHHHHHHHHHc-CCCC---CHHHHHHHHHHHCCHHHHHHHHH
Confidence 34455667778888888876 5899987 999999999999999865 5343 25899999999999999987653
No 66
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=98.19 E-value=2.7e-06 Score=55.79 Aligned_cols=67 Identities=19% Similarity=0.277 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCC---cc-cccCchHHHHHHHHHc
Q 038064 9 GGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKS---SI-EAECPKFKAWVKRCLQ 75 (103)
Q Consensus 9 ~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~---~~-~~~~p~l~~w~~~~~~ 75 (103)
++..+.+.+-+..++..|++.+|++|+++|.+|+.++..+...-.-... ++ ..++|+|..|++|+.+
T Consensus 202 ~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~YP~~~~i~d~le~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 202 AEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYYPFRSHISDLLEGDFPNLLEYCERIRK 272 (281)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheeccCCCcHHHHHhhhchHHHHHHHHHHH
Confidence 4466778899999999999999999999999999998877433221111 11 4679999999999875
No 67
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.03 E-value=2.5e-05 Score=49.83 Aligned_cols=69 Identities=22% Similarity=0.319 Sum_probs=54.8
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHh--cCCcc---cccCchHHHHHHHHHcc
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETF--GKSSI---EAECPKFKAWVKRCLQR 76 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~--~~~~~---~~~~p~l~~w~~~~~~~ 76 (103)
.+...+++.+..+.|+..|+..+||.|+++|-+|..++..+..+-.. ...++ ...|++|-.++.|+++.
T Consensus 175 ~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq~ 248 (257)
T KOG3027|consen 175 MDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQQ 248 (257)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHHH
Confidence 45677788899999999999999999999999999999888655322 11122 47799999999998763
No 68
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=98.00 E-value=5.1e-05 Score=45.37 Aligned_cols=68 Identities=19% Similarity=0.244 Sum_probs=48.9
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHH
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETI 79 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 79 (103)
......++...+..|+..+.......| ++|+-|+.++|.++.+-...+..+ -|++..|+++|++.-.|
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivkgi~~---P~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIVKGIQW---PPKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCTTS------HHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhccCCcC---CHHHHHHHHHHHHHcCC
Confidence 345566788888888888875554444 899999999999999987777665 26899999999986554
No 69
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.64 E-value=0.00026 Score=42.14 Aligned_cols=65 Identities=15% Similarity=0.122 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHH
Q 038064 10 GAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRET 78 (103)
Q Consensus 10 ~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~ 78 (103)
.....+...+..++..+..... .++.+|+-|+.++|.++.+-...+..+ -|++..|+++|++.-.
T Consensus 60 ~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt~vkgi~~---P~~V~~Y~~~~s~~t~ 124 (128)
T cd03199 60 QYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLTLVKGLVF---PPKVKAYLERMSALTK 124 (128)
T ss_pred HHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhhhhcCCCC---CHHHHHHHHHHHHHhC
Confidence 4455677777888888744333 456799999999999998887777665 2689999999987644
No 70
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.48 E-value=0.0008 Score=45.33 Aligned_cols=68 Identities=25% Similarity=0.274 Sum_probs=52.7
Q ss_pred HhHHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhc-C-Ccc---cccCchHHHHHHHHHc
Q 038064 8 AGGAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFG-K-SSI---EAECPKFKAWVKRCLQ 75 (103)
Q Consensus 8 ~~~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~-~-~~~---~~~~p~l~~w~~~~~~ 75 (103)
.........+++..|...|+...||+||++|-.|+.++..+..+-... + ..+ ...+++|.++..++.+
T Consensus 161 e~~i~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 161 EDQIYKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHH
Confidence 445566778899999999999999999999999999999886643321 1 111 2348999999999876
No 71
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=97.44 E-value=0.00042 Score=46.34 Aligned_cols=63 Identities=21% Similarity=0.332 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhcC-CCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHcc
Q 038064 14 EFFEALKTLEGQLG-DKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQR 76 (103)
Q Consensus 14 ~~~~~l~~le~~l~-~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~ 76 (103)
.+.+..+..-..|+ +++|++|++|++||.+++.++..+.....++-.-...++..|+-+|+..
T Consensus 292 ~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~afkd~~q~t~I~eW~~rmeal 355 (370)
T KOG3029|consen 292 HLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQAFKDCLQNTSIGEWYYRMEAL 355 (370)
T ss_pred HHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhHHHHHHhcchHHHHHHHHHHH
Confidence 34444444444453 5699999999999999999997776543222123346899999998753
No 72
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=95.46 E-value=0.065 Score=33.37 Aligned_cols=39 Identities=28% Similarity=0.303 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHhcCCC---CcccCCC-CcHhHHhHHhHHHHHh
Q 038064 14 EFFEALKTLEGQLGDK---PFFGGDN-FGYLDLSLIPFYYTYE 52 (103)
Q Consensus 14 ~~~~~l~~le~~l~~~---~~~~G~~-~t~aD~~l~~~~~~~~ 52 (103)
...+++..|++.|++. .|++|+. +|.+||.++..+..+-
T Consensus 112 ~a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l 154 (168)
T PF11801_consen 112 LAMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLL 154 (168)
T ss_pred HHHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHh
Confidence 3557889999999887 8999988 9999999998887653
No 73
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=93.37 E-value=0.2 Score=31.68 Aligned_cols=67 Identities=7% Similarity=0.096 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHH
Q 038064 10 GAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIA 80 (103)
Q Consensus 10 ~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~ 80 (103)
....++...++.+++.+.+.. -....++.=|+.++|.++.+-...+..|+ .++..|+.+|++...+.
T Consensus 142 ~~~~~i~~dl~~l~~Li~~~s-~~n~~l~~ddi~vFplLRnlt~v~gi~wp---s~v~dy~~~msektqV~ 208 (215)
T COG2999 142 QYLKRIQADLRALDKLIVGPS-AVNGELSEDDILVFPLLRNLTLVAGIQWP---SRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHHHHHHHHHHHHHHHhcCcc-hhccccchhhhhhhHHhccceecccCCCc---HHHHHHHHHHHHhhCcc
Confidence 345667788888888876644 33456999999999999888776676653 37999999998765543
No 74
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=93.20 E-value=0.11 Score=38.02 Aligned_cols=57 Identities=16% Similarity=0.286 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHH----hHhcCCcccccCchHHHHHHH
Q 038064 13 KEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTY----ETFGKSSIEAECPKFKAWVKR 72 (103)
Q Consensus 13 ~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~----~~~~~~~~~~~~p~l~~w~~~ 72 (103)
..+...+..+++.|.-..|++|.++|.||++++..+..- ..... -..+-++.+|++-
T Consensus 91 ~~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~---~k~~~~v~Rw~~~ 151 (712)
T KOG1147|consen 91 DEISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLKA---KKDYQNVERWYDL 151 (712)
T ss_pred HHHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHHHh---hCCchhhhhhcCc
Confidence 346667777888887788999999999999999988432 11111 1235578888873
No 75
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=68.52 E-value=7.3 Score=25.68 Aligned_cols=59 Identities=15% Similarity=0.176 Sum_probs=43.0
Q ss_pred HHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHH
Q 038064 16 FEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIA 80 (103)
Q Consensus 16 ~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~ 80 (103)
..++..++..|.+..|..|.+++-.|+.++..+.-- +....+++..+|+..+.+.-...
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~e------p~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGVE------PQSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhcccC------cchhhhhHHHHHHHHHHHHHHHH
Confidence 467888999999999999999999999887554211 11245677788887777655443
No 76
>PF10653 Phage-A118_gp45: Protein gp45 of Bacteriophage A118; InterPro: IPR018915 The proteins in this entry represents Gp45 in Listeria phage A118 (Bacteriophage A118) and related proteins; Gp45 is thought to have a function in the phage tail-fibre system.
Probab=58.83 E-value=22 Score=17.74 Aligned_cols=31 Identities=10% Similarity=0.151 Sum_probs=21.1
Q ss_pred HHHHccHHHHHhcCChHHHHHHHHHHHHhhh
Q 038064 71 KRCLQRETIAKALPDEKKVLEHASGMRKNLV 101 (103)
Q Consensus 71 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 101 (103)
..|...|+|++-++-.+..-+-+..|+..++
T Consensus 23 tkmianpaf~qkiplietgcekm~dyieelk 53 (62)
T PF10653_consen 23 TKMIANPAFQQKIPLIETGCEKMTDYIEELK 53 (62)
T ss_pred HHHhcCHHHHhccchhhhhhHHHHHHHHHHh
Confidence 4577889998877766655555666665554
No 77
>PRK15371 effector protein YopJ; Provisional
Probab=56.17 E-value=63 Score=22.17 Aligned_cols=63 Identities=13% Similarity=0.200 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHh--HhcCCcccccCchHHHHHHHHH
Q 038064 10 GAKKEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYE--TFGKSSIEAECPKFKAWVKRCL 74 (103)
Q Consensus 10 ~~~~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~--~~~~~~~~~~~p~l~~w~~~~~ 74 (103)
-..+++...++.||+.+.+|.|+ -+.++..|+-+.|.+--.. .+.+.++ .-+-.-..+.+.+.
T Consensus 23 ~~~~~L~~~i~~le~~~~~G~~~-~~~~~~~Di~~lp~lv~~~N~r~P~LNL-~~f~s~~~f~~aik 87 (287)
T PRK15371 23 ISNEELKNIITQLEDDIADGSWI-HKNYARTDLEVMPALVAQANNKYPEMNL-KLVTSPLDLSIEIK 87 (287)
T ss_pred hhHHHHHHHHHHHHHHHHcCCCC-CchhHHhhHHhhHHHHHHHhccCCCCCe-eecCCHHHHHHHHH
Confidence 35677999999999999998887 4568999999999985554 2344454 22333334444443
No 78
>PF11732 Thoc2: Transcription- and export-related complex subunit; InterPro: IPR021726 The THO/TREX complex is the transcription- and export-related complex associated with spliceosomes that preferentially deal with spliced mRNAs as opposed to unspliced mRNAs. Thoc2 plays a role in RNA polymerase II (RNA pol II)-dependent transcription and is required for the stability of DNA repeats []. In humans, the TRE complex is comprised of the exon-junction-associated proteins Aly/REF and UAP56 together with the THO proteins THOC1 (hHpr1/p84), Thoc2 (hRlr1), THOC3 (hTex1), THOC5 (fSAP79), THOC6 (fSAP35), and THOC7 (fSAP24). Although much evidence indicates that the function of the TREX complex as an adaptor between the mRNA and components of the export machinery is conserved among eukaryotes, in Drosophila the majority of mRNAs can be exported from the nucleus independently of the THO complex []. This entry represents a conserved domain found towards the N terminus of these proteins.
Probab=53.57 E-value=32 Score=18.69 Aligned_cols=35 Identities=11% Similarity=0.279 Sum_probs=22.8
Q ss_pred hHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHH
Q 038064 40 LDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCL 74 (103)
Q Consensus 40 aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~ 74 (103)
-|+..++++..+.........++--++..|.+++.
T Consensus 42 ~DvL~~~ll~~L~~~~r~~~k~dg~~~s~Wlq~La 76 (77)
T PF11732_consen 42 YDVLTFCLLERLSNPGRSRLKDDGTNISQWLQSLA 76 (77)
T ss_pred HHHHHHHHHHHHhcccchhcCcCCCCHHHHHHHHh
Confidence 48888888877763322222234467899999875
No 79
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp17p forms a dimer with Vps5p, the yeast counterpart of human SNX1, and is part of the retromer complex that mediates the transport of the carboxypeptidase Y receptor Vps10p from endosomes to Golgi. Similar to Vps5p and SNX1, Vps17p harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvatur
Probab=39.70 E-value=33 Score=20.88 Aligned_cols=17 Identities=12% Similarity=0.454 Sum_probs=13.8
Q ss_pred chHHHHHHHHHccHHHH
Q 038064 64 PKFKAWVKRCLQRETIA 80 (103)
Q Consensus 64 p~l~~w~~~~~~~p~~~ 80 (103)
-.|++|++|+.++|...
T Consensus 112 ~~LqrfL~RV~~hP~L~ 128 (140)
T cd06891 112 ANLQRWFNRVCSDPILI 128 (140)
T ss_pred HHHHHHHHHHhCChhhc
Confidence 46889999999999543
No 80
>PF03421 YopJ: YopJ Serine/Threonine acetyltransferase; InterPro: IPR005083 The infection of mammalian host cells by Yersinia sp. causes a rapid induction of the mitogen-activated protein kinase (MAPK; including the ERK, JNK and p38 pathways) and nuclear factor kappaB (NF-kappaB) signalling pathways that would typically result in cytokine production and initiation of the innate immune response. However, these pathways are rapidly inhibited promoting apoptosis. YopJ has been shown to block phosphorylation of active site residues []. It has also been shown that YopJ acetyltransferase is activated by eukaryotic host cell inositol hexakisphosphate []. Serine and threonine acetylation is yet another complication to the control of signalling pathways and may be a may be a widespread mode of biochemical regulation of endogenous processes in eukaryotic cells. It has been shown that YopJ is a serine/threonine acetyltransferase []. It acetylates the serine and threonine residues in the phosphorylation sites of MAPK kinases and nuclear factor kappaB, preventing their activation by phosphorylation and the inhibition of these signalling pathways []. This entry contains YopJ and related proteins.
Probab=38.52 E-value=1e+02 Score=19.43 Aligned_cols=59 Identities=14% Similarity=0.277 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHh--HhcCCcccccCchHHHHHHHH
Q 038064 13 KEFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYE--TFGKSSIEAECPKFKAWVKRC 73 (103)
Q Consensus 13 ~~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~--~~~~~~~~~~~p~l~~w~~~~ 73 (103)
+.+..+...++..+..+.|. ...++-.|+-+.|.+-... .+++.++ .-+..-..+.+.+
T Consensus 2 ~~L~~y~~~~~~~~~~g~~~-~~~~~~~D~~~lp~lv~~~N~r~P~LnL-~~~~~~~~~~~~i 62 (177)
T PF03421_consen 2 ESLKEYIERLEDDIKNGSWP-NESYAELDIKMLPALVAAENARYPGLNL-HFFDSPEDFVQAI 62 (177)
T ss_pred hHHHHHHHHHHHHHHhCCCC-CcchhhhhHHHHHHHHHHHhhcCCCCce-EEcCCcHHHHHHH
Confidence 35677888899999988888 6779999999999985554 2344443 3333334455554
No 81
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=34.02 E-value=57 Score=16.38 Aligned_cols=27 Identities=15% Similarity=0.187 Sum_probs=14.1
Q ss_pred HHHHHHHHhcCCCCcccCCCC-cHhHHh
Q 038064 17 EALKTLEGQLGDKPFFGGDNF-GYLDLS 43 (103)
Q Consensus 17 ~~l~~le~~l~~~~~~~G~~~-t~aD~~ 43 (103)
...+.|.+.+..+.|-.|+.+ |..+++
T Consensus 4 ~i~~~l~~~I~~g~~~~g~~lps~~~la 31 (64)
T PF00392_consen 4 QIYDQLRQAILSGRLPPGDRLPSERELA 31 (64)
T ss_dssp HHHHHHHHHHHTTSS-TTSBE--HHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCEeCCHHHHH
Confidence 344455555555666666666 665554
No 82
>KOG0485 consensus Transcription factor NKX-5.1/HMX1, contains HOX domain [Transcription]
Probab=30.86 E-value=72 Score=21.13 Aligned_cols=18 Identities=17% Similarity=0.027 Sum_probs=13.4
Q ss_pred ChHHHHHHHHHHHHhhhc
Q 038064 85 DEKKVLEHASGMRKNLVL 102 (103)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~ 102 (103)
.+....-|+.++|++||+
T Consensus 144 TETQVKIWFQNRRnKwKR 161 (268)
T KOG0485|consen 144 TETQVKIWFQNRRNKWKR 161 (268)
T ss_pred hhhhhhhhhhhhhHHHHH
Confidence 344567778899999986
No 83
>PF06552 TOM20_plant: Plant specific mitochondrial import receptor subunit TOM20; InterPro: IPR010547 This family consists of several plant specific mitochondrial import receptor subunit TOM20 (translocase of outer membrane 20 kDa subunit) proteins. Most mitochondrial proteins are encoded by the nuclear genome, and are synthesised in the cytosol. TOM20 is a general import receptor that binds to mitochondrial pre-sequences in the early step of protein import into the mitochondria [].; GO: 0045040 protein import into mitochondrial outer membrane, 0005742 mitochondrial outer membrane translocase complex; PDB: 1ZU2_A.
Probab=30.77 E-value=56 Score=20.93 Aligned_cols=41 Identities=12% Similarity=0.214 Sum_probs=26.6
Q ss_pred ccCchHHHHHHHHHccHHHHHhcCChHHHHHHHHHHHHhhh
Q 038064 61 AECPKFKAWVKRCLQRETIAKALPDEKKVLEHASGMRKNLV 101 (103)
Q Consensus 61 ~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 101 (103)
.+..+|.+|...+.++..++.......-+.+.++++.+.++
T Consensus 23 ~DadnL~~WG~ALLELAqfk~g~es~~miedAisK~eeAL~ 63 (186)
T PF06552_consen 23 LDADNLTNWGGALLELAQFKQGPESKKMIEDAISKFEEALK 63 (186)
T ss_dssp T-HHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHh
Confidence 45678999999999988886654333345555666665543
No 84
>KOG4595 consensus Uncharacterized conserved protein [Function unknown]
Probab=28.03 E-value=1.5e+02 Score=18.09 Aligned_cols=65 Identities=6% Similarity=-0.018 Sum_probs=33.0
Q ss_pred CcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHHHccHHHHHhcCChHHHHHHHHHHHHhhh
Q 038064 37 FGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDEKKVLEHASGMRKNLV 101 (103)
Q Consensus 37 ~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 101 (103)
.+++-.+..+.+.|-.......+....-.+....+-+..++......+....+..+.+++|.+++
T Consensus 52 g~llG~~~Gc~~l~~~~lhs~~~~ks~~~lr~L~~~l~~l~~~~~~~~~d~~~~~~~nkir~~~~ 116 (139)
T KOG4595|consen 52 GELLGKILGCVVLWQQLLHSPKTRKSLRQLRSLISLLPMLNDPPALDETDVQLIRSKNKIRRKLK 116 (139)
T ss_pred HHHHHHHHhHHHHHHHhccCCchhcCHHHHHHHHHHHhccCCCcccchHHHHHHHHHHHHHHHHH
Confidence 34555555555544433322222122223444444444555555555556667777777776654
No 85
>PF10990 DUF2809: Protein of unknown function (DUF2809); InterPro: IPR021257 Some members in this family of proteins are annotated as yjgA however currently no function for the protein is known.
Probab=24.94 E-value=55 Score=18.25 Aligned_cols=17 Identities=24% Similarity=0.391 Sum_probs=14.3
Q ss_pred CcccCCCCcHhHHhHHh
Q 038064 30 PFFGGDNFGYLDLSLIP 46 (103)
Q Consensus 30 ~~~~G~~~t~aD~~l~~ 46 (103)
..+.|..+++.|+..|.
T Consensus 71 ~lvLG~~F~w~Dll~Y~ 87 (91)
T PF10990_consen 71 RLVLGSTFDWWDLLAYA 87 (91)
T ss_pred HhhcCCCCCHHHHHHHH
Confidence 45789999999998874
No 86
>PF06720 Phi-29_GP16_7: Bacteriophage phi-29 early protein GP16.7; InterPro: IPR009595 The early-expressed gene 16.7 is conserved in bacteriophage phi-29 and related phages. It encodes a membrane protein, GP16.7, consisting of an N-terminal transmembrane domain and a C-terminal DNA-binding and dimerisation domain. GP16.7 plays an important role in organising membrane-associated bacteriophage DNA replication [, ]. The C-terminal domain has a similar secondary structure similar to homeodomains, but forms a fundamentally different tertiary structure consisting of a six-helical dimeric fold []. Multimerisation of this dimer leads to efficient DNA binding.; PDB: 2C5R_B 2BNK_A 1ZAE_B.
Probab=24.44 E-value=75 Score=18.65 Aligned_cols=22 Identities=27% Similarity=0.332 Sum_probs=17.2
Q ss_pred hcCChHHHHHHHHHHHHhhhcC
Q 038064 82 ALPDEKKVLEHASGMRKNLVLE 103 (103)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ 103 (103)
-+..+...++|++..|.-||.|
T Consensus 98 ~L~Te~eVmnYiEnqR~~WKLE 119 (130)
T PF06720_consen 98 RLQTEQEVMNYIENQRTYWKLE 119 (130)
T ss_dssp --SSHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHhhHhHHhhh
Confidence 3567788999999999999865
No 87
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=24.42 E-value=1.8e+02 Score=21.12 Aligned_cols=37 Identities=16% Similarity=0.177 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhcCCCCcccCCCCcHhHHhHHhHHHHHhHh
Q 038064 14 EFFEALKTLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETF 54 (103)
Q Consensus 14 ~~~~~l~~le~~l~~~~~~~G~~~t~aD~~l~~~~~~~~~~ 54 (103)
.+.+.+..|+..-..- +..+|+||++.+.-...++..
T Consensus 111 gL~~a~~~L~pik~k~----~~~iS~ADL~~LaG~~AiE~~ 147 (409)
T cd00649 111 NLDKARRLLWPIKQKY----GNKISWADLMILAGNVALESM 147 (409)
T ss_pred hHHHHHHHHHHHHHHc----CCCccHHHHHHHHHHHHHHHc
Confidence 4566666666665442 356999999877655544443
No 88
>PHA02776 E7 protein; Provisional
Probab=22.53 E-value=34 Score=19.64 Aligned_cols=14 Identities=21% Similarity=0.197 Sum_probs=11.5
Q ss_pred ccCCCCcHhHHhHH
Q 038064 32 FGGDNFGYLDLSLI 45 (103)
Q Consensus 32 ~~G~~~t~aD~~l~ 45 (103)
+.|.++|+-||.+-
T Consensus 1 M~G~~pTl~DIvL~ 14 (101)
T PHA02776 1 MHGKHPTLKDIVLD 14 (101)
T ss_pred CCCCCCcHhHeeee
Confidence 46899999999873
No 89
>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins.
Probab=21.81 E-value=1.4e+02 Score=18.82 Aligned_cols=30 Identities=23% Similarity=0.414 Sum_probs=20.2
Q ss_pred HHHHHhcCC-CCc-ccCCCCcHhHHhHHhHHH
Q 038064 20 KTLEGQLGD-KPF-FGGDNFGYLDLSLIPFYY 49 (103)
Q Consensus 20 ~~le~~l~~-~~~-~~G~~~t~aD~~l~~~~~ 49 (103)
+.+.+...+ +++ ++.++.|+.|+.+...+.
T Consensus 12 ~~l~~~~~~~~~~i~v~NH~S~lD~~~l~~~~ 43 (205)
T cd07993 12 ERLRKAAQEGHPVVLLPTHRSYLDFLLLSFIL 43 (205)
T ss_pred HHHHHHhhcCCCEEEEecCcchhHHHHHHHHH
Confidence 344444444 565 468999999998887663
No 90
>COG4365 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.47 E-value=3.5e+02 Score=20.08 Aligned_cols=41 Identities=10% Similarity=0.091 Sum_probs=25.2
Q ss_pred cCCCCcHhHHhHHhHHHHHhHhcCCcccccCchHHHHHHHH
Q 038064 33 GGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRC 73 (103)
Q Consensus 33 ~G~~~t~aD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~ 73 (103)
.+..-|++|+...-+...+...+-.-+....|.|.+....|
T Consensus 203 i~e~~sytD~Fa~Llh~lf~~eGllvlds~~p~lrkLeapm 243 (537)
T COG4365 203 IAESHSYTDFFARLLHGLFAPEGLLVLDSGDPALRKLEAPM 243 (537)
T ss_pred HhhcccHHHHHHHHHHHhhhhcceEEecCCChHHHHHHHHH
Confidence 45678999998775555555442222235578887765543
No 91
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=21.45 E-value=2e+02 Score=19.97 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhcCCCC--cccCCCCcHhHHhHHhHHHHH
Q 038064 14 EFFEALKTLEGQLGDKP--FFGGDNFGYLDLSLIPFYYTY 51 (103)
Q Consensus 14 ~~~~~l~~le~~l~~~~--~~~G~~~t~aD~~l~~~~~~~ 51 (103)
.+.+.+..||..-...+ -..|.++|+||++...-...+
T Consensus 73 ~L~~~~~~Le~ik~~~~~~~~~~~~vS~ADLivLaG~vAi 112 (297)
T cd08200 73 ELAKVLAVLEGIQKEFNESQSGGKKVSLADLIVLGGCAAV 112 (297)
T ss_pred HHHHHHHHHHHHHHHhcccccCCccccHHHHHHHHhHHHH
Confidence 35556666665543211 123557999999776555333
No 92
>PF13227 DUF4035: Protein of unknown function (DUF4035)
Probab=20.89 E-value=73 Score=16.02 Aligned_cols=12 Identities=17% Similarity=0.138 Sum_probs=9.5
Q ss_pred CCCCcHhHHhHH
Q 038064 34 GDNFGYLDLSLI 45 (103)
Q Consensus 34 G~~~t~aD~~l~ 45 (103)
|.++++.|+++.
T Consensus 30 g~k~~l~D~mp~ 41 (53)
T PF13227_consen 30 GKKPKLSDFMPF 41 (53)
T ss_pred CCCCcHHHHHhh
Confidence 456999999875
Done!