Your job contains 1 sequence.
>038067
AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVKVEEIMGGFIRKDGESNGIESESETENG
NRNRNSEGNIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYK
RIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLA
KTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKI
VKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICG
GAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPE
FIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAM
AKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGAKILHGD
GELERVLHETKSAHENDSEVLLKSPGACDE
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038067
(510 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2155446 - symbol:AT5G49840 species:3702 "Arabi... 1304 4.7e-159 2
TAIR|locus:2006942 - symbol:AT1G33360 species:3702 "Arabi... 1287 5.4e-155 3
TAIR|locus:2154257 - symbol:CLPX "CLP protease regulatory... 1313 5.9e-148 2
TIGR_CMR|SO_1795 - symbol:SO_1795 "ATP-dependent Clp prot... 857 4.3e-94 2
UNIPROTKB|P0CAU2 - symbol:clpX "ATP-dependent Clp proteas... 843 3.0e-93 2
TIGR_CMR|SPO_1004 - symbol:SPO_1004 "ATP-dependent Clp pr... 849 3.4e-92 2
TIGR_CMR|CPS_3784 - symbol:CPS_3784 "ATP-dependent Clp pr... 843 1.5e-91 2
UNIPROTKB|Q9KQS7 - symbol:clpX "ATP-dependent Clp proteas... 836 4.9e-91 2
TIGR_CMR|VC_1921 - symbol:VC_1921 "ATP-dependent Clp prot... 836 4.9e-91 2
UNIPROTKB|P0A6H1 - symbol:clpX "ClpX" species:83333 "Esch... 831 6.2e-91 2
TIGR_CMR|CHY_0326 - symbol:CHY_0326 "ATP-dependent Clp pr... 832 3.4e-90 2
TIGR_CMR|ECH_0900 - symbol:ECH_0900 "ATP-dependent Clp pr... 819 3.9e-89 2
TIGR_CMR|CBU_0739 - symbol:CBU_0739 "ATP-dependent Clp pr... 810 1.7e-88 2
TIGR_CMR|BA_4704 - symbol:BA_4704 "ATP-dependent Clp prot... 807 3.5e-88 2
TIGR_CMR|APH_0969 - symbol:APH_0969 "ATP-dependent Clp pr... 813 5.6e-88 2
TIGR_CMR|GSU_1791 - symbol:GSU_1791 "ATP-dependent Clp pr... 810 7.2e-88 2
TIGR_CMR|CJE_0324 - symbol:CJE_0324 "ATP-dependent Clp pr... 774 1.2e-85 2
UNIPROTKB|P0A528 - symbol:clpX "ATP-dependent Clp proteas... 791 2.8e-84 2
TIGR_CMR|NSE_0753 - symbol:NSE_0753 "ATP-dependent Clp pr... 790 4.0e-83 2
UNIPROTKB|F1N155 - symbol:CLPX "Uncharacterized protein" ... 759 5.8e-82 2
UNIPROTKB|E2QSS3 - symbol:CLPX "Uncharacterized protein" ... 759 5.8e-82 2
UNIPROTKB|O76031 - symbol:CLPX "ATP-dependent Clp proteas... 759 5.8e-82 2
RGD|1304883 - symbol:Clpx "ClpX caseinolytic peptidase X ... 759 5.8e-82 2
UNIPROTKB|Q5U2U0 - symbol:Clpx "ATP-dependent Clp proteas... 759 5.8e-82 2
MGI|MGI:1346017 - symbol:Clpx "caseinolytic peptidase X (... 758 7.4e-82 2
UNIPROTKB|F1NA92 - symbol:CLPX "Uncharacterized protein" ... 758 1.9e-81 2
UNIPROTKB|E1BX77 - symbol:CLPX "Uncharacterized protein" ... 749 1.7e-80 2
FB|FBgn0038745 - symbol:CG4538 species:7227 "Drosophila m... 735 3.2e-79 2
UNIPROTKB|F1SJL5 - symbol:CLPX "Uncharacterized protein" ... 763 1.0e-75 1
ZFIN|ZDB-GENE-040912-143 - symbol:clpx "ClpX caseinolytic... 753 1.2e-74 1
WB|WBGene00008412 - symbol:D2030.2 species:6239 "Caenorha... 694 2.9e-74 2
SGD|S000000431 - symbol:MCX1 "Mitochondrial matrix protei... 446 6.8e-65 2
ASPGD|ASPL0000057717 - symbol:AN0349 species:162425 "Emer... 372 9.6e-65 3
WB|WBGene00019461 - symbol:K07A3.3 species:6239 "Caenorha... 599 2.5e-58 1
TIGR_CMR|CBU_2012 - symbol:CBU_2012 "heat shock protein H... 182 5.8e-32 4
TIGR_CMR|CHY_1790 - symbol:CHY_1790 "heat shock protein H... 174 1.8e-30 4
UNIPROTKB|P0A6H5 - symbol:hslU species:83333 "Escherichia... 152 3.4e-30 4
TIGR_CMR|SO_4163 - symbol:SO_4163 "heat shock protein Hsl... 148 2.7e-28 4
TIGR_CMR|NSE_0177 - symbol:NSE_0177 "heat shock protein H... 167 4.1e-28 4
TIGR_CMR|SPO_3882 - symbol:SPO_3882 "heat shock protein H... 162 1.2e-23 3
TIGR_CMR|CJE_0764 - symbol:CJE_0764 "heat shock protein H... 176 2.0e-23 3
UNIPROTKB|Q9KNQ7 - symbol:hslU "ATP-dependent protease AT... 159 4.0e-22 3
TIGR_CMR|VC_2674 - symbol:VC_2674 "protease HslVU, ATPase... 159 4.0e-22 3
UNIPROTKB|P43773 - symbol:hslU "ATP-dependent protease AT... 161 1.2e-21 3
DICTYBASE|DDB_G0288593 - symbol:DDB_G0288593 "ATP-depende... 157 4.7e-21 3
TIGR_CMR|CPS_4370 - symbol:CPS_4370 "heat shock protein H... 161 2.1e-20 3
TIGR_CMR|ECH_0997 - symbol:ECH_0997 "heat shock protein H... 162 3.4e-20 3
TIGR_CMR|APH_1074 - symbol:APH_1074 "ATP-dependent Hsl pr... 147 7.7e-20 3
UNIPROTKB|I3LI39 - symbol:I3LI39 "Uncharacterized protein... 130 1.2e-07 1
TIGR_CMR|CHY_2164 - symbol:CHY_2164 "ATPase, AAA family" ... 146 4.7e-07 1
FB|FBgn0031519 - symbol:CG3326 species:7227 "Drosophila m... 133 1.9e-05 1
UNIPROTKB|F1S3Z2 - symbol:SPAST "Spastin" species:9823 "S... 130 3.5e-05 1
UNIPROTKB|Q719N1 - symbol:SPAST "Spastin" species:9823 "S... 130 5.1e-05 1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 131 6.4e-05 1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 131 6.4e-05 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 115 7.3e-05 2
RGD|1308494 - symbol:Spast "spastin" species:10116 "Rattu... 128 7.8e-05 1
UNIPROTKB|F1M9D2 - symbol:Spast "Spastin" species:10116 "... 128 7.8e-05 1
UNIPROTKB|E1C6S3 - symbol:SPAST "Spastin" species:9031 "G... 128 8.0e-05 1
UNIPROTKB|F1NCJ3 - symbol:SPAST "Spastin" species:9031 "G... 128 8.2e-05 1
UNIPROTKB|Q5ZK92 - symbol:SPAST "Spastin" species:9031 "G... 128 8.4e-05 1
UNIPROTKB|D4A0I3 - symbol:Spast "Spastin" species:10116 "... 128 8.4e-05 1
UNIPROTKB|A2VDN5 - symbol:SPAST "Spastin" species:9913 "B... 128 8.4e-05 1
MGI|MGI:1858896 - symbol:Spast "spastin" species:10090 "M... 128 8.4e-05 1
UNIPROTKB|Q9UBP0 - symbol:SPAST "Spastin" species:9606 "H... 128 8.5e-05 1
UNIPROTKB|F1PR99 - symbol:SPAST "Uncharacterized protein"... 128 8.6e-05 1
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 126 0.00012 1
UNIPROTKB|F1MNE5 - symbol:FIGNL1 "Uncharacterized protein... 127 0.00013 1
ZFIN|ZDB-GENE-040426-2331 - symbol:spast "spastin" specie... 126 0.00013 1
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 122 0.00013 2
UNIPROTKB|G4MRG5 - symbol:MGG_02418 "Vesicular-fusion pro... 125 0.00014 3
UNIPROTKB|B7PXE3 - symbol:spas "Spastin" species:6945 "Ix... 126 0.00015 1
UNIPROTKB|Q60HE0 - symbol:PEX6 "Peroxin Pex6p" species:95... 125 0.00016 1
TAIR|locus:2174819 - symbol:EMB3144 "EMBRYO DEFECTIVE 314... 127 0.00017 1
UNIPROTKB|Q6AZT2 - symbol:spast "Spastin" species:8355 "X... 125 0.00017 1
UNIPROTKB|Q05AS3 - symbol:spast "Spastin" species:8364 "X... 125 0.00018 1
DICTYBASE|DDB_G0276153 - symbol:nsfA "N-ethylmaleimide-se... 126 0.00018 1
UNIPROTKB|E2RDF7 - symbol:PEX6 "Uncharacterized protein" ... 127 0.00020 1
UNIPROTKB|Q6PIW4 - symbol:FIGNL1 "Fidgetin-like protein 1... 125 0.00020 1
UNIPROTKB|I3LS61 - symbol:FIGNL1 "Uncharacterized protein... 125 0.00020 1
UNIPROTKB|J9P4P7 - symbol:FIGNL1 "Uncharacterized protein... 125 0.00020 1
UNIPROTKB|D2H7A7 - symbol:FIGNL1 "Uncharacterized protein... 125 0.00020 1
RGD|1307112 - symbol:Fignl1 "fidgetin-like 1" species:101... 125 0.00020 1
MGI|MGI:1890648 - symbol:Fignl1 "fidgetin-like 1" species... 125 0.00021 1
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 121 0.00026 1
UNIPROTKB|Q7QBW0 - symbol:spas "Spastin" species:7165 "An... 125 0.00027 1
CGD|CAL0005827 - symbol:RPT4 species:5476 "Candida albica... 121 0.00029 1
UNIPROTKB|B4K799 - symbol:spas "Spastin" species:7230 "Dr... 124 0.00031 1
UNIPROTKB|B4M0H8 - symbol:spas "Spastin" species:7244 "Dr... 124 0.00031 1
UNIPROTKB|B3M301 - symbol:spas "Spastin" species:7217 "Dr... 124 0.00031 1
UNIPROTKB|B4NBP4 - symbol:spas "Spastin" species:7260 "Dr... 124 0.00031 1
UNIPROTKB|B4JII0 - symbol:spas "Spastin" species:7222 "Dr... 124 0.00032 1
UNIPROTKB|A5GFQ7 - symbol:PEX6 "Peroxisomal biogenesis fa... 125 0.00032 1
RGD|621637 - symbol:Pex6 "peroxisomal biogenesis factor 6... 125 0.00033 1
UNIPROTKB|P54777 - symbol:Pex6 "Peroxisome assembly facto... 125 0.00033 1
UNIPROTKB|Q13608 - symbol:PEX6 "Peroxisome assembly facto... 125 0.00033 1
MGI|MGI:2385054 - symbol:Pex6 "peroxisomal biogenesis fac... 125 0.00033 1
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 117 0.00033 2
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 117 0.00033 2
UNIPROTKB|E2RM61 - symbol:PSMC5 "Uncharacterized protein"... 116 0.00035 1
WARNING: Descriptions of 28 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2155446 [details] [associations]
symbol:AT5G49840 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0006457 GO:GO:0006508 GO:GO:0017111
GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 IPI:IPI00522644
RefSeq:NP_568714.4 UniGene:At.49150 ProteinModelPortal:F4K7F6
SMR:F4K7F6 PRIDE:F4K7F6 EnsemblPlants:AT5G49840.1 GeneID:835047
KEGG:ath:AT5G49840 OMA:ASESYNI Uniprot:F4K7F6
Length = 608
Score = 1304 (464.1 bits), Expect = 4.7e-159, Sum P(2) = 4.7e-159
Identities = 267/390 (68%), Positives = 319/390 (81%)
Query: 114 AVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEI--VELEKSNVLLMGP 171
AVYNHYKRIYH+S +K GS +S N ++E+D I VEL+KSNVLL+GP
Sbjct: 224 AVYNHYKRIYHASRKK-------------GSASESYNIDMEDDNIDHVELDKSNVLLLGP 270
Query: 172 TGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGI 231
TGSGKTLLAKTLARIVNVPF I DAT+LTQA YVGED ES+LYKL A +VE AQRGI
Sbjct: 271 TGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKLYVEAGCNVEEAQRGI 330
Query: 232 VYIDEVDKI-VKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPI 290
VYIDEVDK+ +K+ S N GRDVSGEGVQQ+LLK+LEGTVV+VPIP+ G R+ PRGD+I +
Sbjct: 331 VYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPEKGLRRDPRGDSIQM 390
Query: 291 DTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSG 350
DTKDILFICGGAF+ LEKT+SER+ D+SIGFGA VR NM T GL+ A VTSSLLES+ S
Sbjct: 391 DTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSSAAVTSSLLESLQSE 450
Query: 351 DLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDD 410
DLVAYGLIPEF+GR PILVSLSALNEDQLVQVL EPK+ALG+QYKK+F MNNV+L FT+
Sbjct: 451 DLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRMNNVQLQFTEG 510
Query: 411 ALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKI-GTSSVNAVLVDKEAVGSVDA 469
A RLIA+KAM+KNTGARGLR++LE+ILTEAMFE+P++ G+ S+ AVLVD+EAVGSV +
Sbjct: 511 ATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSIKAVLVDEEAVGSVGS 570
Query: 470 PGCGAKILHGDGELERVLHETKSAHENDSE 499
PGCGAKIL GD L++ + E +S ++ +
Sbjct: 571 PGCGAKILKGDNVLQQFVEEAESKEKSKED 600
Score = 267 (99.0 bits), Expect = 4.7e-159, Sum P(2) = 4.7e-159
Identities = 70/154 (45%), Positives = 83/154 (53%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVKV--------EEIMGGFIR-------KD 45
AVNFC +CKTAFYFRPFKL+PL+GSFIELGKVK ++ F R +
Sbjct: 111 AVNFCSQCKTAFYFRPFKLSPLQGSFIELGKVKGTDDDHDDDDDDQKSFPRNWKIQGLRS 170
Query: 46 GESNGIXXXXXXXXXXXXXXXXXXIDLPTPKEICKGLDEFVIGQERAKKSHIFCILVDML 105
E I LPTPKEIC+GLDEFVIGQE+AKK
Sbjct: 171 DEDGEDADEEEDESNGGDKEKQSVIKLPTPKEICQGLDEFVIGQEKAKK----------- 219
Query: 106 VYVIGACCAVYNHYKRIYHSSLQKELVSDHLYVD 139
V+ AVYNHYKRIYH+S +K S+ +D
Sbjct: 220 --VLSV--AVYNHYKRIYHASRKKGSASESYNID 249
>TAIR|locus:2006942 [details] [associations]
symbol:AT1G33360 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006457 "protein folding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006457 GO:GO:0006508
GO:GO:0017111 GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:BT015363
EMBL:BT015893 IPI:IPI00536875 RefSeq:NP_564423.3 UniGene:At.39953
ProteinModelPortal:Q66GN9 SMR:Q66GN9 STRING:Q66GN9 PaxDb:Q66GN9
PRIDE:Q66GN9 EnsemblPlants:AT1G33360.1 GeneID:840230
KEGG:ath:AT1G33360 TAIR:At1g33360 InParanoid:Q66GN9 OMA:KEICKWL
PhylomeDB:Q66GN9 ProtClustDB:CLSN2690007 Genevestigator:Q66GN9
Uniprot:Q66GN9
Length = 656
Score = 1287 (458.1 bits), Expect = 5.4e-155, Sum P(3) = 5.4e-155
Identities = 263/378 (69%), Positives = 309/378 (81%)
Query: 120 KRIYHSSLQKELVSDHLY--VDSILGSGVKSGNCN--VENDEIVELEKSNVLLMGPTGSG 175
K + S K+++S +Y I + +K G+ +++D+ VEL+KSNVLLMGPTGSG
Sbjct: 261 KFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGSAAQPIDDDDNVELDKSNVLLMGPTGSG 320
Query: 176 KTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYID 235
KTLLAKTLAR+VNVPF I DAT LTQAGYVG+D ES+L+KLL A+F+V+AAQ+GIVYID
Sbjct: 321 KTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQGIVYID 380
Query: 236 EVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKD 294
EVDKI K AES N RDVSGEGVQQALLK+LEGT+VNVP G RKHPRGD+I IDTKD
Sbjct: 381 EVDKITKKAESLNISRDVSGEGVQQALLKLLEGTIVNVP--GKGARKHPRGDHIQIDTKD 438
Query: 295 ILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDLVA 354
ILFICGGAFV LEKTI +RRQDSSIGFGAPVRANM T G+T +TSSLLESV+S DL A
Sbjct: 439 ILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVESADLTA 498
Query: 355 YGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRL 414
YGLIPEF+GRFPILVSLSAL EDQL++VL+EPKNALG+QYKK+FSMNNVKLHFT+ AL +
Sbjct: 499 YGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEI 558
Query: 415 IAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGCGA 474
I+K+AM KNTGARGLRALLE+ILTEAMFEIP+ K G ++AV+VD+E+ S + GC A
Sbjct: 559 ISKQAMVKNTGARGLRALLESILTEAMFEIPDDKKGDERIDAVIVDEESTSSEASRGCTA 618
Query: 475 KILHGDGELERVLHETKS 492
KIL GDG ER L E KS
Sbjct: 619 KILRGDGAFERYLSENKS 636
Score = 146 (56.5 bits), Expect = 5.4e-155, Sum P(3) = 5.4e-155
Identities = 34/59 (57%), Positives = 39/59 (66%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK 129
D PTPKEICK LD+FVIGQ RAKK V+ AVYNHYKRIYH+S++K
Sbjct: 248 DFPTPKEICKWLDKFVIGQSRAKK-------------VLSV--AVYNHYKRIYHTSMKK 291
Score = 115 (45.5 bits), Expect = 5.4e-155, Sum P(3) = 5.4e-155
Identities = 19/33 (57%), Positives = 28/33 (84%)
Query: 1 AVNFCPKCKTAFYFRPFKLTPLEGSFIELGKVK 33
+VNFCP CKTA+ F P ++PL+G+FIE+G+V+
Sbjct: 113 SVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQ 145
>TAIR|locus:2154257 [details] [associations]
symbol:CLPX "CLP protease regulatory subunit X"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IDA] [GO:0015996 "chlorophyll
catabolic process" evidence=RCA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002688 GO:GO:0006457
GO:GO:0006508 GO:GO:0017111 EMBL:AB013388 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 HSSP:O25926
ProtClustDB:CLSN2690007 EMBL:AY035103 EMBL:AY142561 IPI:IPI00536799
RefSeq:NP_568792.1 UniGene:At.21717 ProteinModelPortal:Q9FK07
SMR:Q9FK07 STRING:Q9FK07 PRIDE:Q9FK07 EnsemblPlants:AT5G53350.1
GeneID:835416 KEGG:ath:AT5G53350 TAIR:At5g53350 InParanoid:Q9FK07
OMA:NCRSAYF PhylomeDB:Q9FK07 ArrayExpress:Q9FK07
Genevestigator:Q9FK07 Uniprot:Q9FK07
Length = 579
Score = 1313 (467.3 bits), Expect = 5.9e-148, Sum P(2) = 5.9e-148
Identities = 269/380 (70%), Positives = 308/380 (81%)
Query: 114 AVYNHYKRIYHSSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTG 173
AVYNHYKRIYH S QK + DS + K + D++VELEKSN+LLMGPTG
Sbjct: 185 AVYNHYKRIYHESSQKRSAGE---TDS---TAAKPAD-----DDMVELEKSNILLMGPTG 233
Query: 174 SGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVY 233
SGKTLLAKTLAR VNVPF I DAT LTQAGYVGED ES+LYKLL AD++V AAQ+GIVY
Sbjct: 234 SGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVY 293
Query: 234 IDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDT 292
IDEVDKI K AES N RDVSGEGVQQALLKMLEGT+VNVP + G RKHPRGDNI IDT
Sbjct: 294 IDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP--EKGARKHPRGDNIQIDT 351
Query: 293 KDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVDSGDL 352
KDILFICGGAFV +EKTISERR DSSIGFGAPVRANMR GG+T+A V S+L+E+V+S DL
Sbjct: 352 KDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVESSDL 411
Query: 353 VAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDAL 412
+AYGLIPEF+GRFP+LVSLSAL E+QL+QVL EPKNALG+QYKKM+ MN+VKLHFT+ AL
Sbjct: 412 IAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTESAL 471
Query: 413 RLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPGC 472
RLIA+KA+ KNTGARGLRALLE+IL ++M+EIP+ G+ + AV+VD+EAV G
Sbjct: 472 RLIARKAITKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEGRRGS 531
Query: 473 GAKILHGDGELERVLHETKS 492
GAKIL G G L R L ET S
Sbjct: 532 GAKILRGKGALARYLSETNS 551
Score = 153 (58.9 bits), Expect = 5.9e-148, Sum P(2) = 5.9e-148
Identities = 36/59 (61%), Positives = 39/59 (66%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK 129
D PTPKEICKGL++FVIGQERAKK V+ AVYNHYKRIYH S QK
Sbjct: 157 DFPTPKEICKGLNKFVIGQERAKK-------------VLSV--AVYNHYKRIYHESSQK 200
>TIGR_CMR|SO_1795 [details] [associations]
symbol:SO_1795 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:211586 "Shewanella oneidensis MR-1"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_717404.1
ProteinModelPortal:Q8EG18 SMR:Q8EG18 PRIDE:Q8EG18 GeneID:1169568
KEGG:son:SO_1795 PATRIC:23523213 OMA:MEMRESA Uniprot:Q8EG18
Length = 426
Score = 857 (306.7 bits), Expect = 4.3e-94, Sum P(2) = 4.3e-94
Identities = 182/314 (57%), Positives = 227/314 (72%)
Query: 159 VELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLA 218
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFT+ DAT LT+AGYVGED E+++ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 219 AADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDN 277
D+DVE AQRGIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV VP P
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVP-PQG 227
Query: 278 GPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQ-DSSIGFGAPVRANMRTGGLTD 336
G RKHP+ + + +DT ILFICGGAF GLEK I +R S IGFGA V+ G D
Sbjct: 228 G-RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK------GEKD 280
Query: 337 ALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKK 396
S L V+ GDLV YGLIPEFIGR P++ +L+ L+E+ LVQ+L EPKNAL +QY
Sbjct: 281 KATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNA 340
Query: 397 MFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNA 456
+F M V+L F +DAL+ IA KAM++ TGARGLR+++E IL + M++IP G V A
Sbjct: 341 LFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDIPSID-GV--VKA 397
Query: 457 VLVDKEAVGSVDAP 470
V VD+ V AP
Sbjct: 398 V-VDESVVNGESAP 410
Score = 99 (39.9 bits), Expect = 4.3e-94, Sum P(2) = 4.3e-94
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK-- 129
LPTP E+ LD++VIGQ+RAKK V+ AVYNHYKR+ +SS +
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKK-------------VLSV--AVYNHYKRLKNSSPKDGV 109
Query: 130 ELVSDHLYVDSILGSG 145
EL ++ + GSG
Sbjct: 110 ELGKSNILLIGPTGSG 125
>UNIPROTKB|P0CAU2 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:190650 "Caulobacter crescentus CB15" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AE005673 PIR:D87492
RefSeq:NP_420768.1 ProteinModelPortal:P0CAU2 SMR:P0CAU2
IntAct:P0CAU2 PRIDE:P0CAU2 GeneID:942736 GenomeReviews:AE005673_GR
KEGG:ccr:CC_1961 PATRIC:21300930 Uniprot:P0CAU2
Length = 420
Score = 843 (301.8 bits), Expect = 3.0e-93, Sum P(2) = 3.0e-93
Identities = 181/314 (57%), Positives = 232/314 (73%)
Query: 155 NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLY 214
ND VEL KSN+LL+GPTG+GKTLLA+TLARI++VPFT+ DAT LT+AGYVGED E+++
Sbjct: 105 ND--VELAKSNILLVGPTGTGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIVL 162
Query: 215 KLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVP 273
KLL AAD++VE AQRGIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV +VP
Sbjct: 163 KLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP 222
Query: 274 IPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVR--ANMRT 331
P G RKHP+ + + +DT +ILFICGGAF GLEK IS R SIGFGA V RT
Sbjct: 223 -PQGG-RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGAAKSIGFGAKVTDPEERRT 280
Query: 332 GGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALG 391
G +L +V+ DL +GLIPEFIGR P++ +L L+E LV++L EPKNA
Sbjct: 281 G---------EILRNVEPDDLQRFGLIPEFIGRLPVVATLEDLDEAALVKILTEPKNAFV 331
Query: 392 RQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGT 451
+QY+++F M N+ L FT+DAL +AKKA+A+ TGARGLR+++E IL E MFE+P T G
Sbjct: 332 KQYQRLFEMENIGLTFTEDALHQVAKKAIARKTGARGLRSIMEGILLETMFELP-TYEGV 390
Query: 452 SSV--NAVLVDKEA 463
V NA +V+ A
Sbjct: 391 EEVVVNAEVVEGRA 404
Score = 105 (42.0 bits), Expect = 3.0e-93, Sum P(2) = 3.0e-93
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK-- 129
+PTP+EIC+ LD++VIGQ AKK + + AV+NHYKR+ H+S
Sbjct: 63 VPTPREICEVLDDYVIGQGHAKK--VLAV-------------AVHNHYKRLNHASKNNDV 107
Query: 130 ELVSDHLYVDSILGSG 145
EL ++ + G+G
Sbjct: 108 ELAKSNILLVGPTGTG 123
>TIGR_CMR|SPO_1004 [details] [associations]
symbol:SPO_1004 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005524
"ATP binding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_166256.1
HSSP:P0A6H1 ProteinModelPortal:Q5LUP9 SMR:Q5LUP9 GeneID:3195507
KEGG:sil:SPO1004 PATRIC:23375301 OMA:YVIGQQQ Uniprot:Q5LUP9
Length = 424
Score = 849 (303.9 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 173/312 (55%), Positives = 238/312 (76%)
Query: 159 VELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLA 218
+EL KSN+LL+GPTG GKTLLA+TLARI++VPFT+ DAT LT+AGYVGED E+++ KLL
Sbjct: 110 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 219 AADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDN 277
A++++VE AQRGIVYIDEVDKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P
Sbjct: 170 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVP-PQG 228
Query: 278 GPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDA 337
G RKHP+ + + +DT +ILFICGGAF GL+K I++R + S++GFGA VRA+ G
Sbjct: 229 G-RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRASDERG----- 282
Query: 338 LVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKM 397
L ++ DL+ +GLIPEF+GR P+L +L L+ED LV +L +PKNAL +QY+++
Sbjct: 283 --VGELFTELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRL 340
Query: 398 FSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAV 457
F + + +L FTDDAL+ IAK+A+ + TGARGLR+++E+IL + MF++P +V V
Sbjct: 341 FELEDTELDFTDDALKAIAKRAIERKTGARGLRSIMEDILLDTMFDLPSM----DNVTKV 396
Query: 458 LVDKEAVGSVDA 469
+V++EAV S DA
Sbjct: 397 VVNEEAVTS-DA 407
Score = 89 (36.4 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
+PTP++IC LD++VIGQ AK+ V+ AV+NHYKR+ H+
Sbjct: 65 VPTPRDICDVLDDYVIGQSTAKR-------------VLSV--AVHNHYKRLNHA 103
>TIGR_CMR|CPS_3784 [details] [associations]
symbol:CPS_3784 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:167879 "Colwellia psychrerythraea 34H"
[GO:0005524 "ATP binding" evidence=ISS] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0008270 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_270451.1
HSSP:P0A6H5 ProteinModelPortal:Q47XL9 SMR:Q47XL9 STRING:Q47XL9
PRIDE:Q47XL9 GeneID:3521714 KEGG:cps:CPS_3784 PATRIC:21470481
BioCyc:CPSY167879:GI48-3806-MONOMER Uniprot:Q47XL9
Length = 424
Score = 843 (301.8 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 173/321 (53%), Positives = 230/321 (71%)
Query: 152 NVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAES 211
N +N +EL KSN+LL+GPTGSGKTLLA+TLAR+++VPFT+ DAT LT+AGYVGED E+
Sbjct: 102 NGDNHNGIELGKSNILLIGPTGSGKTLLAQTLARLLDVPFTMADATTLTEAGYVGEDVEN 161
Query: 212 VLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVV 270
++ KLL D+DVE AQRGIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV
Sbjct: 162 IIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 221
Query: 271 NVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSS-IGFGAPVRANM 329
+VP P G RKHP+ + + +DT ILFICGGAF GL+K + +R + IGFGA VR
Sbjct: 222 SVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVVEQRNHTGTGIGFGAEVRGKD 279
Query: 330 RTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNA 389
+ LTD L V+ DLV YGLIPEFIGR P+L +L L+E L+Q+L EPKNA
Sbjct: 280 QEISLTDRLA------DVEPQDLVKYGLIPEFIGRLPVLATLRELDEAALIQILQEPKNA 333
Query: 390 LGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKI 449
L +Q+ +F M NV+L F DAL IA+KAM + TGARGLR+++E +L + M+E+P +
Sbjct: 334 LTKQFTALFDMENVELEFRSDALHAIARKAMDRKTGARGLRSIVEAVLLDTMYELPSME- 392
Query: 450 GTSSVNAVLVDKEAVGSVDAP 470
+V+ ++VD+ + P
Sbjct: 393 ---NVSKIVVDENTIKGESKP 410
Score = 89 (36.4 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 28/76 (36%), Positives = 39/76 (51%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK-- 129
LP+P EI + LDE+VIGQ+ AKK + + AVYNHYKR+ +
Sbjct: 65 LPSPIEIRESLDEYVIGQDHAKK--VLAV-------------AVYNHYKRLRNGDNHNGI 109
Query: 130 ELVSDHLYVDSILGSG 145
EL ++ + GSG
Sbjct: 110 ELGKSNILLIGPTGSG 125
>UNIPROTKB|Q9KQS7 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
Length = 426
Score = 836 (299.3 bits), Expect = 4.9e-91, Sum P(2) = 4.9e-91
Identities = 174/316 (55%), Positives = 227/316 (71%)
Query: 157 EIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKL 216
E VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPFT+ DAT LT+AGYVGED E+++ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 217 LAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIP 275
L D+DV A+RGIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-P 226
Query: 276 DNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGL 334
G RKHP+ + + +DT ILFICGGAF GL+K I +R + IGFGA VR+ + L
Sbjct: 227 QGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTL 285
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
S L V+ DLV YGLIPEFIGR P+ +L+ L+E L+Q+L EPKNAL +QY
Sbjct: 286 ------SELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQY 339
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSV 454
+F + NV L F +DAL+ IA KAM + TGARGLR++LE +L E M+E+P + V
Sbjct: 340 AALFELENVDLEFREDALKAIAAKAMKRKTGARGLRSILEAVLLETMYELPSME----EV 395
Query: 455 NAVLVDKEAVGSVDAP 470
+ V++D+ + AP
Sbjct: 396 SKVVIDESVINGESAP 411
Score = 91 (37.1 bits), Expect = 4.9e-91, Sum P(2) = 4.9e-91
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
LPTP++I + LD++VIGQE AKK + + AVYNHYKR+ + E
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKK--VLAV-------------AVYNHYKRLRNGDTTSE 108
>TIGR_CMR|VC_1921 [details] [associations]
symbol:VC_1921 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
Length = 426
Score = 836 (299.3 bits), Expect = 4.9e-91, Sum P(2) = 4.9e-91
Identities = 174/316 (55%), Positives = 227/316 (71%)
Query: 157 EIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKL 216
E VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPFT+ DAT LT+AGYVGED E+++ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 217 LAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIP 275
L D+DV A+RGIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVP-P 226
Query: 276 DNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGL 334
G RKHP+ + + +DT ILFICGGAF GL+K I +R + IGFGA VR+ + L
Sbjct: 227 QGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTL 285
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
S L V+ DLV YGLIPEFIGR P+ +L+ L+E L+Q+L EPKNAL +QY
Sbjct: 286 ------SELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQY 339
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSV 454
+F + NV L F +DAL+ IA KAM + TGARGLR++LE +L E M+E+P + V
Sbjct: 340 AALFELENVDLEFREDALKAIAAKAMKRKTGARGLRSILEAVLLETMYELPSME----EV 395
Query: 455 NAVLVDKEAVGSVDAP 470
+ V++D+ + AP
Sbjct: 396 SKVVIDESVINGESAP 411
Score = 91 (37.1 bits), Expect = 4.9e-91, Sum P(2) = 4.9e-91
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
LPTP++I + LD++VIGQE AKK + + AVYNHYKR+ + E
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKK--VLAV-------------AVYNHYKRLRNGDTTSE 108
>UNIPROTKB|P0A6H1 [details] [associations]
symbol:clpX "ClpX" species:83333 "Escherichia coli K-12"
[GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;IDA] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0006950 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0008270 EMBL:U82664 GO:GO:0017111 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 EMBL:L18867 EMBL:Z23278 PIR:A48709
RefSeq:NP_414972.1 RefSeq:YP_488730.1 PDB:1OVX PDB:2DS5 PDB:2DS6
PDB:2DS7 PDB:2DS8 PDB:3HTE PDB:3HWS PDBsum:1OVX PDBsum:2DS5
PDBsum:2DS6 PDBsum:2DS7 PDBsum:2DS8 PDBsum:3HTE PDBsum:3HWS
ProteinModelPortal:P0A6H1 SMR:P0A6H1 DIP:DIP-35907N IntAct:P0A6H1
PaxDb:P0A6H1 PRIDE:P0A6H1 EnsemblBacteria:EBESCT00000004587
EnsemblBacteria:EBESCT00000004721 EnsemblBacteria:EBESCT00000004722
EnsemblBacteria:EBESCT00000015548 GeneID:12931741 GeneID:945083
KEGG:ecj:Y75_p0426 KEGG:eco:b0438 PATRIC:32116029 EchoBASE:EB0157
EcoGene:EG10159 BioCyc:EcoCyc:EG10159-MONOMER
BioCyc:ECOL316407:JW0428-MONOMER BioCyc:MetaCyc:EG10159-MONOMER
EvolutionaryTrace:P0A6H1 Genevestigator:P0A6H1 Uniprot:P0A6H1
Length = 424
Score = 831 (297.6 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 171/321 (53%), Positives = 230/321 (71%)
Query: 152 NVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAES 211
N + VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPFT+ DAT LT+AGYVGED E+
Sbjct: 101 NGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN 160
Query: 212 VLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVV 270
++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV
Sbjct: 161 IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 220
Query: 271 NVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSS-IGFGAPVRANM 329
VP P G RKHP+ + + +DT ILFICGGAF GL+K IS R + S IGFGA V+A
Sbjct: 221 AVP-PQGG-RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK- 277
Query: 330 RTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNA 389
+D LL V+ DL+ +GLIPEFIGR P++ +L+ L+E+ L+Q+L EPKNA
Sbjct: 278 -----SDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNA 332
Query: 390 LGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKI 449
L +QY+ +F++ V L F D+AL IAKKAMA+ TGARGLR+++E L + M+++P +
Sbjct: 333 LTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSME- 391
Query: 450 GTSSVNAVLVDKEAVGSVDAP 470
V V++D+ + P
Sbjct: 392 ---DVEKVVIDESVIDGQSKP 409
Score = 95 (38.5 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 29/76 (38%), Positives = 39/76 (51%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK-- 129
LPTP EI LD++VIGQE+AKK + + AVYNHYKR+ +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKK--VLAV-------------AVYNHYKRLRNGDTSNGV 108
Query: 130 ELVSDHLYVDSILGSG 145
EL ++ + GSG
Sbjct: 109 ELGKSNILLIGPTGSG 124
>TIGR_CMR|CHY_0326 [details] [associations]
symbol:CHY_0326 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368
"endopeptidase Clp complex" evidence=ISS] [GO:0051082 "unfolded
protein binding" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_359189.1
ProteinModelPortal:Q3AF95 SMR:Q3AF95 STRING:Q3AF95 GeneID:3726618
KEGG:chy:CHY_0326 PATRIC:21273823
BioCyc:CHYD246194:GJCN-327-MONOMER Uniprot:Q3AF95
Length = 418
Score = 832 (297.9 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 167/291 (57%), Positives = 218/291 (74%)
Query: 159 VELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLA 218
VEL KSN+L++GPTGSGKTLLA+TLAR +NVPF I DATALT+AGYVGED E++L KL+
Sbjct: 101 VELSKSNILMLGPTGSGKTLLAQTLARFLNVPFAIADATALTEAGYVGEDVENILLKLIQ 160
Query: 219 AADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDN 277
AD+D+E A++GIVYIDE+DKI K+E+ + RDVSGEGVQQALLK+LEGT+ +VP P
Sbjct: 161 NADYDIERAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVP-PQG 219
Query: 278 GPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDA 337
G RKHP + I IDT +ILFI GGAF G+EK I R +GFGA ++
Sbjct: 220 G-RKHPHQEFIQIDTTNILFIVGGAFEGIEKIIQNRIGKKGLGFGAEIKPKREQN----- 273
Query: 338 LVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKM 397
+L+ + DL+ +GLIPEF+GR PI+V+L AL+ED LV++L EPKNAL +QY+K+
Sbjct: 274 --VGEILKHIMPEDLLKFGLIPEFVGRLPIIVTLDALDEDALVRILTEPKNALIKQYQKL 331
Query: 398 FSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETK 448
F ++ V L F +DALR IA+KA+ +NTGARGLRA+LE ++ + M+EIP K
Sbjct: 332 FELDGVTLEFEEDALRAIAQKAIKRNTGARGLRAILEEVMLDVMYEIPSRK 382
Score = 87 (35.7 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRI 122
+LP P+EI LD++VIGQE AKK + + AVYNHYKRI
Sbjct: 56 ELPKPQEIKAYLDQYVIGQEEAKK--VLAV-------------AVYNHYKRI 92
>TIGR_CMR|ECH_0900 [details] [associations]
symbol:ECH_0900 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0008270 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 RefSeq:YP_507694.1 ProteinModelPortal:Q2GFT9
SMR:Q2GFT9 STRING:Q2GFT9 PRIDE:Q2GFT9 GeneID:3927295
KEGG:ech:ECH_0900 PATRIC:20577200
BioCyc:ECHA205920:GJNR-903-MONOMER Uniprot:Q2GFT9
Length = 406
Score = 819 (293.4 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 174/307 (56%), Positives = 224/307 (72%)
Query: 159 VELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLA 218
VE+ KSNVLL+GPTGSGKTLLA+TLAR++ VPF + DAT LT+AGYVGED E++L KLL
Sbjct: 102 VEISKSNVLLIGPTGSGKTLLARTLARVLQVPFAMADATTLTEAGYVGEDVENILLKLLQ 161
Query: 219 AADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDN 277
AA+F+V+AAQRGI+YIDEVDKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P
Sbjct: 162 AANFNVDAAQRGIIYIDEVDKISRKSENTSITRDVSGEGVQQALLKVIEGTVSSVP-PQG 220
Query: 278 GPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDA 337
G RKHP + I I+T +ILFI GGAF GL+K I R + SS+GF A V+ +
Sbjct: 221 G-RKHPHQEFIQINTDNILFIFGGAFDGLDKIIESRHRGSSMGFEANVQKVSKN------ 273
Query: 338 LVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKM 397
+ + DLV +GLIPEF+GR P++ SL L+E L ++L+EPKN+L +QYKK+
Sbjct: 274 ---KDIFCYTEPEDLVKFGLIPEFVGRIPVITSLGELDESTLCRILVEPKNSLVKQYKKL 330
Query: 398 FSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAV 457
F M+N+ L F D AL +IAKKA + TGARGLRA+LE +L + MFE P G+S VN V
Sbjct: 331 FEMDNINLQFDDSALSVIAKKAAVRKTGARGLRAILEALLLDLMFESP----GSSDVNQV 386
Query: 458 LVDKEAV 464
++ KE V
Sbjct: 387 VISKEMV 393
Score = 90 (36.7 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 29/73 (39%), Positives = 40/73 (54%)
Query: 75 PKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSL--QKELV 132
PKEI K LDE+VIGQE +KK V+ AVYNHYKR+ + S+ + E+
Sbjct: 61 PKEIKKVLDEYVIGQEHSKK-------------VLSV--AVYNHYKRLSNLSVISEVEIS 105
Query: 133 SDHLYVDSILGSG 145
++ + GSG
Sbjct: 106 KSNVLLIGPTGSG 118
>TIGR_CMR|CBU_0739 [details] [associations]
symbol:CBU_0739 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:227377 "Coxiella burnetii RSA 493"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH
ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
RefSeq:NP_819765.1 ProteinModelPortal:Q83DJ1 SMR:Q83DJ1
PRIDE:Q83DJ1 GeneID:1208630 KEGG:cbu:CBU_0739 PATRIC:17930169
BioCyc:CBUR227377:GJ7S-736-MONOMER Uniprot:Q83DJ1
Length = 422
Score = 810 (290.2 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
Identities = 162/320 (50%), Positives = 225/320 (70%)
Query: 152 NVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAES 211
N + VE+ KSN+LL+GPTGSGKTLLA+TLA+I++VPF I DAT LT+AGYVGED E+
Sbjct: 97 NQTKKDSVEISKSNILLIGPTGSGKTLLAQTLAKILDVPFAIADATTLTEAGYVGEDVEN 156
Query: 212 VLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVV 270
++ KLL ++DVE A+ GI+YIDE+DKI K +S + RDVSGEGVQQALLK++EGTV
Sbjct: 157 IIQKLLQKCNYDVEKAKTGIIYIDEIDKIARKTDSPSLTRDVSGEGVQQALLKLIEGTVA 216
Query: 271 NVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMR 330
++P P G RKHP+ + + +DT +ILFICGGAF L K I R S IGF A VR +
Sbjct: 217 SIP-PQGG-RKHPQQEYLQVDTSNILFICGGAFADLHKIIQRRTDKSGIGFAAEVRP--K 272
Query: 331 TGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNAL 390
+A S L++ + GDL+ YGLIPEF+GR PI+ +L L+ED L+++L EPKNAL
Sbjct: 273 EDFSREA---SKLIKQTEPGDLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEPKNAL 329
Query: 391 GRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIG 450
+QY+K+F V++ F +DAL+ IAK+A+ + TGARGLR+++E+ L + M+++P G
Sbjct: 330 VKQYRKLFEFEGVEIDFREDALKAIAKRAIQQKTGARGLRSIVEHTLLDLMYDLPGVAAG 389
Query: 451 TSSVNAVLVDKEAVGSVDAP 470
+ V++D + P
Sbjct: 390 ---LRKVVIDSGVIDQASPP 406
Score = 93 (37.8 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK-- 129
LPTP EI + LDE+VIGQE AKK V+ AVYNHYKR+ + + +
Sbjct: 60 LPTPPEIHRMLDEYVIGQEFAKK-------------VLSV--AVYNHYKRLGNQTKKDSV 104
Query: 130 ELVSDHLYVDSILGSG 145
E+ ++ + GSG
Sbjct: 105 EISKSNILLIGPTGSG 120
>TIGR_CMR|BA_4704 [details] [associations]
symbol:BA_4704 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:198094 "Bacillus anthracis str. Ames"
[GO:0006508 "proteolysis" evidence=ISS] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_846917.1
RefSeq:YP_021352.1 RefSeq:YP_030616.1 ProteinModelPortal:Q81LB9
SMR:Q81LB9 PRIDE:Q81LB9 DNASU:1083685
EnsemblBacteria:EBBACT00000013271 EnsemblBacteria:EBBACT00000014313
EnsemblBacteria:EBBACT00000019954 GeneID:1083685 GeneID:2816065
GeneID:2851842 KEGG:ban:BA_4704 KEGG:bar:GBAA_4704 KEGG:bat:BAS4369
OMA:IMFEVPS BioCyc:BANT260799:GJAJ-4424-MONOMER
BioCyc:BANT261594:GJ7F-4572-MONOMER Uniprot:Q81LB9
Length = 419
Score = 807 (289.1 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 170/322 (52%), Positives = 229/322 (71%)
Query: 150 NCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDA 209
N N + D+ VEL KSN+ L+GPTGSGKTLLA+TLARI+NVPF I DAT+LT+AGYVGED
Sbjct: 97 NSNSKIDD-VELAKSNIALIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDV 155
Query: 210 ESVLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGT 268
E++L KL+ AAD+DVE A++GI+YIDE+DK+ K+E+ + RDVSGEGVQQALLK+LEGT
Sbjct: 156 ENILLKLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGT 215
Query: 269 VVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRAN 328
V +VP P G RKHP + I IDT +ILFICGGAF G+E I R + IGFG+
Sbjct: 216 VASVP-PQGG-RKHPHQEFIQIDTTNILFICGGAFDGIEPIIKRRLGEKVIGFGS----E 269
Query: 329 MRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKN 388
+ + + V S +L DL+ +GLIPEFIGR P++ +L L+ED LV +L +PKN
Sbjct: 270 KKNADVNEKHVLSHVLPE----DLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKN 325
Query: 389 ALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETK 448
AL +Q++K+ +++V+L F + AL IAKKA+ + TGARGLR+++E ++ E MFE+P K
Sbjct: 326 ALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRK 385
Query: 449 IGTSSVNAVLVDKEAVGSVDAP 470
+ ++ KE V AP
Sbjct: 386 ----DIEKCILTKETVADNAAP 403
Score = 93 (37.8 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 30/77 (38%), Positives = 39/77 (50%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSL--Q 128
D+P P EI + LDE+VIGQ+ AKK+ AVYNHYKRI +S
Sbjct: 60 DVPKPVEIREILDEYVIGQDNAKKA---------------LAVAVYNHYKRINSNSKIDD 104
Query: 129 KELVSDHLYVDSILGSG 145
EL ++ + GSG
Sbjct: 105 VELAKSNIALIGPTGSG 121
>TIGR_CMR|APH_0969 [details] [associations]
symbol:APH_0969 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006457 "protein
folding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
evidence=ISS] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
RefSeq:YP_505536.1 ProteinModelPortal:Q2GJB5 SMR:Q2GJB5
STRING:Q2GJB5 PRIDE:Q2GJB5 GeneID:3930607 KEGG:aph:APH_0969
PATRIC:20950654 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 BioCyc:APHA212042:GHPM-981-MONOMER
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 Uniprot:Q2GJB5
Length = 415
Score = 813 (291.2 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 175/307 (57%), Positives = 227/307 (73%)
Query: 159 VELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLA 218
VE+ KSNVLL+GPTGSGKTLLA+TLAR++ VPF + DAT LT+AGYVGED E++L KLL
Sbjct: 101 VEISKSNVLLIGPTGSGKTLLARTLARVLQVPFAMADATTLTEAGYVGEDVENILLKLLQ 160
Query: 219 AADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDN 277
AA+F+VEAAQRGI+YIDEVDKI K+E+ + RDVSGEGVQQALLK++EGTV +VP P
Sbjct: 161 AANFNVEAAQRGIIYIDEVDKISRKSENASITRDVSGEGVQQALLKVIEGTVSSVP-PQG 219
Query: 278 GPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDA 337
G RKHP + I I T +ILFI GGAF GLEK I R + SS+GF A V++ +
Sbjct: 220 G-RKHPHQEFIQISTDNILFIFGGAFDGLEKIIEARNRGSSMGFEANVQSMVSP------ 272
Query: 338 LVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKM 397
T +L + DLV +GLIPEFIGR P++ SL L+E+ L +VL+EPKN+L +QY K+
Sbjct: 273 --TKDVLSYAEPEDLVKFGLIPEFIGRIPVITSLGKLDENTLFRVLVEPKNSLVKQYAKL 330
Query: 398 FSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAV 457
F M+N++L F DDAL IA+KA+ +NTGARGLRA++E++L + MF+ P+ G + V
Sbjct: 331 FEMDNLELKFDDDALMAIARKAVDRNTGARGLRAIMESLLLDFMFD-PQ---GCAHEGKV 386
Query: 458 LVDKEAV 464
+ KE V
Sbjct: 387 SISKEMV 393
Score = 85 (35.0 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 75 PKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSL--QKELV 132
P+EI + LDE+VIGQE +KK V+ AVYNHYKR+ +S + + E+
Sbjct: 60 PREIKEVLDEYVIGQEHSKK-------------VLSV--AVYNHYKRLRNSGVISEVEIS 104
Query: 133 SDHLYVDSILGSG 145
++ + GSG
Sbjct: 105 KSNVLLIGPTGSG 117
>TIGR_CMR|GSU_1791 [details] [associations]
symbol:GSU_1791 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:243231 "Geobacter sulfurreducens PCA"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 OMA:IMFEVPS RefSeq:NP_952841.1
ProteinModelPortal:Q74C83 SMR:Q74C83 PRIDE:Q74C83 GeneID:2686411
KEGG:gsu:GSU1791 PATRIC:22026429
BioCyc:GSUL243231:GH27-1811-MONOMER Uniprot:Q74C83
Length = 417
Score = 810 (290.2 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
Identities = 166/307 (54%), Positives = 225/307 (73%)
Query: 159 VELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLA 218
VE++KSN+LL+GPTGSGKTLLA+TLARI+ VPF + DAT LT+AGYVGED E+++ LL
Sbjct: 107 VEMQKSNILLLGPTGSGKTLLAQTLARILKVPFAMADATNLTEAGYVGEDVENIILNLLQ 166
Query: 219 AADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDN 277
AAD+DVE AQ+GI+YIDE+DKI K++S + RDVSGEGVQQALLK++EGTV +VP P
Sbjct: 167 AADYDVERAQKGIIYIDEIDKIARKSDSPSITRDVSGEGVQQALLKIIEGTVASVP-PKG 225
Query: 278 GPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDA 337
G RKHP+ + + +DT +ILFICGGAF GL+ I +R +GFGA V++ +
Sbjct: 226 G-RKHPQQEFLKVDTTNILFICGGAFAGLDSIIQQRIGVKKLGFGADVKSKVEKRA---- 280
Query: 338 LVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKM 397
LL V DL+ +G IPEFIGR P+L +L L+E +VQ+L EPKNAL +QY+K+
Sbjct: 281 ---GELLTEVTPEDLLKFGFIPEFIGRLPVLATLRELDETAMVQILKEPKNALIKQYQKL 337
Query: 398 FSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIP-ETKIGTSSVNA 456
F M +VKL FTD +L I+++A+ + TGARGLR++LEN + + M+EIP +T + +N
Sbjct: 338 FEMEHVKLKFTDGSLVAISREALKRKTGARGLRSILENAMLDIMYEIPSQTMVKEVVINE 397
Query: 457 -VLVDKE 462
V+ +KE
Sbjct: 398 DVIYNKE 404
Score = 87 (35.7 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
Identities = 24/51 (47%), Positives = 30/51 (58%)
Query: 72 LPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRI 122
LP P+EI LDE+VIGQ++AKK + + AVYNHYKRI
Sbjct: 63 LPKPREIKDVLDEYVIGQDQAKK--VLAV-------------AVYNHYKRI 98
>TIGR_CMR|CJE_0324 [details] [associations]
symbol:CJE_0324 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:195099 "Campylobacter jejuni RM1221"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0017111 GO:GO:0008233
InterPro:IPR025943 PROSITE:PS00676 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 RefSeq:YP_178344.1 ProteinModelPortal:Q5HWJ1
SMR:Q5HWJ1 STRING:Q5HWJ1 GeneID:3231086 KEGG:cjr:CJE0324
PATRIC:20042350 BioCyc:CJEJ195099:GJC0-329-MONOMER Uniprot:Q5HWJ1
Length = 407
Score = 774 (277.5 bits), Expect = 1.2e-85, Sum P(2) = 1.2e-85
Identities = 156/294 (53%), Positives = 218/294 (74%)
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
D+ EL KSN+LL+GPTGSGKTLLA+TLA+ ++VP I DAT+LT+AGYVGED E++L +
Sbjct: 102 DDDTELFKSNILLVGPTGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILTR 161
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIVK-AESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
LL AAD DV+ AQ+GIV+IDE+DKI + +E+R+ RDVSGEGVQQALLK++EG++VN+P
Sbjct: 162 LLQAADGDVQRAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSLVNIP- 220
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGL 334
P G RKHP + I IDT +ILF+CGGAF GLE + + D +GF + +
Sbjct: 221 PKGG-RKHPNQEFIQIDTSNILFVCGGAFDGLETILKRKLGDKVVGFFDDAKEENK---- 275
Query: 335 TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQY 394
+LLE ++ DLV +GLIPE IGR ++ SL+ LNE+ +V++L EPKNA+ +QY
Sbjct: 276 -------ALLEKIEPDDLVHFGLIPELIGRLHVIASLNELNEEDMVRILTEPKNAIIKQY 328
Query: 395 KKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETK 448
+K+F+++ V L F +DALR IA+ A+ + TGARGLR+++E ++ + MFE+PE K
Sbjct: 329 QKLFAIDGVNLKFEEDALRAIAQLALERKTGARGLRSIIEEMMVDLMFELPEYK 382
Score = 102 (41.0 bits), Expect = 1.2e-85, Sum P(2) = 1.2e-85
Identities = 30/75 (40%), Positives = 41/75 (54%)
Query: 74 TPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK---E 130
TPKE+ LD +VIGQ+RAKK V+ +G VYNHYKR++ + LQ E
Sbjct: 62 TPKELKAYLDRYVIGQDRAKK-----------VFSVG----VYNHYKRLFKAELQDDDTE 106
Query: 131 LVSDHLYVDSILGSG 145
L ++ + GSG
Sbjct: 107 LFKSNILLVGPTGSG 121
>UNIPROTKB|P0A528 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:1773 "Mycobacterium tuberculosis" [GO:0005515
"protein binding" evidence=IPI] [GO:0005618 "cell wall"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0040007 GO:GO:0005618
GO:GO:0006457 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0008270 EMBL:BX842579
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:IMFEVPS PIR:H70864
RefSeq:NP_216973.1 RefSeq:NP_337018.1 RefSeq:YP_006515894.1
ProteinModelPortal:P0A528 SMR:P0A528 PRIDE:P0A528
EnsemblBacteria:EBMYCT00000001091 EnsemblBacteria:EBMYCT00000069736
GeneID:13319167 GeneID:888167 GeneID:925794 KEGG:mtc:MT2532
KEGG:mtu:Rv2457c KEGG:mtv:RVBD_2457c PATRIC:18127322
TubercuList:Rv2457c Uniprot:P0A528
Length = 426
Score = 791 (283.5 bits), Expect = 2.8e-84, Sum P(2) = 2.8e-84
Identities = 168/309 (54%), Positives = 220/309 (71%)
Query: 157 EIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKL 216
E VEL KSN+L++GPTG GKT LA+TLA+++NVPF I DATALT+AGYVGED E++L KL
Sbjct: 108 EPVELTKSNILMLGPTGCGKTYLAQTLAKMLNVPFAIADATALTEAGYVGEDVENILLKL 167
Query: 217 LAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIP 275
+ AAD+DV+ A+ GI+YIDEVDKI K+E+ + RDVSGEGVQQALLK+LEGT +VP P
Sbjct: 168 IQAADYDVKRAETGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTQASVP-P 226
Query: 276 DNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLT 335
G RKHP + I IDT ++LFI GAF GLEK I ER +GFGA VR+
Sbjct: 227 QGG-RKHPHQEFIQIDTTNVLFIVAGAFAGLEKIIYERVGKRGLGFGAEVRSKAE----- 280
Query: 336 DALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYK 395
+ T+ V DL+ +GLIPEFIGR P++ S++ L+++ LV++L EPKNAL +QY
Sbjct: 281 --IDTTDHFADVMPEDLIKFGLIPEFIGRLPVVASVTNLDKESLVKILSEPKNALVKQYI 338
Query: 396 KMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVN 455
++F M+ V+L FTDDAL IA +A+ + TGARGLRA++E +L M++IP V
Sbjct: 339 RLFEMDGVELEFTDDALEAIADQAIHRGTGARGLRAIMEEVLLPVMYDIPSR----DDVA 394
Query: 456 AVLVDKEAV 464
V+V KE V
Sbjct: 395 KVVVTKETV 403
Score = 72 (30.4 bits), Expect = 2.8e-84, Sum P(2) = 2.8e-84
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRI 122
+LP P EI + L+ +VIGQ+ AK++ AVYNHYKRI
Sbjct: 60 ELPKPAEIREFLEGYVIGQDTAKRT---------------LAVAVYNHYKRI 96
>TIGR_CMR|NSE_0753 [details] [associations]
symbol:NSE_0753 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] [GO:0051082 "unfolded protein binding"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 GO:GO:0017111 EMBL:CP000237
GenomeReviews:CP000237_GR InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
OMA:IMFEVPS RefSeq:YP_506628.1 ProteinModelPortal:Q2GD18
STRING:Q2GD18 PRIDE:Q2GD18 GeneID:3931978 KEGG:nse:NSE_0753
PATRIC:22681511 BioCyc:NSEN222891:GHFU-764-MONOMER Uniprot:Q2GD18
Length = 400
Score = 790 (283.2 bits), Expect = 4.0e-83, Sum P(2) = 4.0e-83
Identities = 156/295 (52%), Positives = 221/295 (74%)
Query: 155 NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLY 214
N + VE+ KSN+L++GPTG GKTL AKTLAR +NVPF I DAT++T+AGYVG+D E++L
Sbjct: 98 NSKDVEITKSNILIIGPTGCGKTLFAKTLARFLNVPFAICDATSITEAGYVGDDVENILR 157
Query: 215 KLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVP 273
LL +AD++VEAAQ+GIVYIDE+DKI K++S + RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 158 MLLQSADYNVEAAQKGIVYIDEIDKISRKSDSPSITRDVSGEGVQQALLKIMEGTIASVP 217
Query: 274 IPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGG 333
P G RKHP + I IDT +ILFICGGAFVGL+ I+ R+ +++GF + +++
Sbjct: 218 -PQGG-RKHPNQETIQIDTTNILFICGGAFVGLDNIIANRQSINTMGFKSELQSKE---- 271
Query: 334 LTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQ 393
V+ ++L+ V+ DLV +G+IPEF+GR P++ L L ED LV++L PKNAL +Q
Sbjct: 272 -----VSPTILKKVEPEDLVKFGMIPEFVGRLPVIGVLDELTEDNLVEILSVPKNALVKQ 326
Query: 394 YKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETK 448
Y +F M+N++L F+D+AL+ +A+ A+ + GARGLRA++E++L MFE+P K
Sbjct: 327 YVCLFGMDNIQLSFSDEALKTVARAAIKRKVGARGLRAIMESVLRNYMFELPSNK 381
Score = 62 (26.9 bits), Expect = 4.0e-83, Sum P(2) = 4.0e-83
Identities = 24/75 (32%), Positives = 32/75 (42%)
Query: 74 TPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQK---E 130
TPK+I K D F+ QE AKK I + AVYNHYK + L E
Sbjct: 59 TPKDIKKYFDSFITAQEDAKK--ILSV-------------AVYNHYKCFVGNRLNSKDVE 103
Query: 131 LVSDHLYVDSILGSG 145
+ ++ + G G
Sbjct: 104 ITKSNILIIGPTGCG 118
>UNIPROTKB|F1N155 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:DAAA02027858
EMBL:DAAA02027859 EMBL:DAAA02027860 IPI:IPI00696713
Ensembl:ENSBTAT00000011038 Uniprot:F1N155
Length = 607
Score = 759 (272.2 bits), Expect = 5.8e-82, Sum P(2) = 5.8e-82
Identities = 164/332 (49%), Positives = 224/332 (67%)
Query: 155 NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLY 214
+D+I +LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D T LTQAGYVGED ESV+
Sbjct: 253 HDDI-KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIA 311
Query: 215 KLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
KLL A+++VE AQ+GIV++DEVDKI + RDV GEGVQQ LLK+LEGT+VNVP
Sbjct: 312 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVP- 370
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAP--VRANMRTG 332
+ RK RG+ + +DT +ILF+ GAF GL++ IS R+ + +GFG P + R
Sbjct: 371 -EKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTPSNLGKGRRAA 428
Query: 333 GLTDALVTSS-------------LLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQL 379
D S LL V++ DL+ +G+IPEF+GR P++V L +L+E L
Sbjct: 429 AAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVPLHSLDEKTL 488
Query: 380 VQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTE 439
VQ+L EP+NA+ QY+ +FSM+ +L+ T+DAL+ IA+ A+ + TGARGLR+++E +L E
Sbjct: 489 VQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLRSIMEKLLLE 548
Query: 440 AMFEIPETKIGTSSVNAVLVDKEAVGSVDAPG 471
MFE+P S + V VDKE V PG
Sbjct: 549 PMFEVPN-----SDIVCVEVDKEVVEGKKEPG 575
Score = 82 (33.9 bits), Expect = 5.8e-82, Sum P(2) = 5.8e-82
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 73 PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
P PK+I LD++V+GQ AKK V+ AVYNHYKRIY++
Sbjct: 141 PPPKKIYNYLDKYVVGQSFAKK-------------VLSV--AVYNHYKRIYNN 178
>UNIPROTKB|E2QSS3 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AAEX03016215
RefSeq:XP_852508.1 Ensembl:ENSCAFT00000027135 GeneID:609344
KEGG:cfa:609344 NextBio:20894946 Uniprot:E2QSS3
Length = 633
Score = 759 (272.2 bits), Expect = 5.8e-82, Sum P(2) = 5.8e-82
Identities = 164/332 (49%), Positives = 224/332 (67%)
Query: 155 NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLY 214
+D+I +LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D T LTQAGYVGED ESV+
Sbjct: 279 HDDI-KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIA 337
Query: 215 KLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
KLL A+++VE AQ+GIV++DEVDKI + RDV GEGVQQ LLK+LEGT+VNVP
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVP- 396
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAP--VRANMRTG 332
+ RK RG+ + +DT +ILF+ GAF GL++ IS R+ + +GFG P + R
Sbjct: 397 -EKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTPSNLGKGRRAA 454
Query: 333 GLTDALVTSS-------------LLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQL 379
D S LL V++ DL+ +G+IPEF+GR P++V L +L+E L
Sbjct: 455 AAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVPLHSLDEKTL 514
Query: 380 VQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTE 439
VQ+L EP+NA+ QY+ +FSM+ +L+ T+DAL+ IA+ A+ + TGARGLR+++E +L E
Sbjct: 515 VQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLRSIMEKLLLE 574
Query: 440 AMFEIPETKIGTSSVNAVLVDKEAVGSVDAPG 471
MFE+P S + V VDKE V PG
Sbjct: 575 PMFEVPN-----SDIVCVEVDKEVVEGKKEPG 601
Score = 82 (33.9 bits), Expect = 5.8e-82, Sum P(2) = 5.8e-82
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 73 PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
P PK+I LD++V+GQ AKK V+ AVYNHYKRIY++
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKK-------------VLSV--AVYNHYKRIYNN 204
>UNIPROTKB|O76031 [details] [associations]
symbol:CLPX "ATP-dependent Clp protease ATP-binding subunit
clpX-like, mitochondrial" species:9606 "Homo sapiens" [GO:0006457
"protein folding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IDA] [GO:0016504 "peptidase activator activity"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=NAS;IDA]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IDA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IDA] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] [GO:0010952 "positive regulation of peptidase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
GO:GO:0046872 GO:GO:0016504 GO:GO:0016887 GO:GO:0042645
EMBL:CH471082 GO:GO:0051603 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AJ006267
EMBL:AJ276980 EMBL:AJ276981 EMBL:AJ276966 EMBL:AJ276967
EMBL:AJ276968 EMBL:AJ276969 EMBL:AJ276970 EMBL:AJ276971
EMBL:AJ276972 EMBL:AJ276973 EMBL:AJ276974 EMBL:AJ276975
EMBL:AJ276976 EMBL:AJ276977 EMBL:AK292316 EMBL:BC130373
EMBL:BC136487 IPI:IPI00008728 RefSeq:NP_006651.2 UniGene:Hs.113823
ProteinModelPortal:O76031 SMR:O76031 IntAct:O76031
MINT:MINT-3002168 STRING:O76031 PhosphoSite:O76031 PaxDb:O76031
PeptideAtlas:O76031 PRIDE:O76031 Ensembl:ENST00000300107
GeneID:10845 KEGG:hsa:10845 UCSC:uc002aom.3 CTD:10845
GeneCards:GC15M065440 HGNC:HGNC:2088 HPA:HPA040262
neXtProt:NX_O76031 PharmGKB:PA26614 HOVERGEN:HBG004940
InParanoid:O76031 OMA:KSIIKEP OrthoDB:EOG46DM2G PhylomeDB:O76031
GenomeRNAi:10845 NextBio:41174 ArrayExpress:O76031 Bgee:O76031
CleanEx:HS_CLPX Genevestigator:O76031 GermOnline:ENSG00000166855
GO:GO:0009841 Uniprot:O76031
Length = 633
Score = 759 (272.2 bits), Expect = 5.8e-82, Sum P(2) = 5.8e-82
Identities = 164/332 (49%), Positives = 224/332 (67%)
Query: 155 NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLY 214
+D+I +LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D T LTQAGYVGED ESV+
Sbjct: 279 HDDI-KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIA 337
Query: 215 KLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
KLL A+++VE AQ+GIV++DEVDKI + RDV GEGVQQ LLK+LEGT+VNVP
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVP- 396
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAP--VRANMRTG 332
+ RK RG+ + +DT +ILF+ GAF GL++ IS R+ + +GFG P + R
Sbjct: 397 -EKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTPSNLGKGRRAA 454
Query: 333 GLTDALVTSS-------------LLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQL 379
D S LL V++ DL+ +G+IPEF+GR P++V L +L+E L
Sbjct: 455 AAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVPLHSLDEKTL 514
Query: 380 VQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTE 439
VQ+L EP+NA+ QY+ +FSM+ +L+ T+DAL+ IA+ A+ + TGARGLR+++E +L E
Sbjct: 515 VQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLRSIMEKLLLE 574
Query: 440 AMFEIPETKIGTSSVNAVLVDKEAVGSVDAPG 471
MFE+P S + V VDKE V PG
Sbjct: 575 PMFEVPN-----SDIVCVEVDKEVVEGKKEPG 601
Score = 82 (33.9 bits), Expect = 5.8e-82, Sum P(2) = 5.8e-82
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 73 PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
P PK+I LD++V+GQ AKK V+ AVYNHYKRIY++
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKK-------------VLSV--AVYNHYKRIYNN 204
>RGD|1304883 [details] [associations]
symbol:Clpx "ClpX caseinolytic peptidase X homolog (E. coli)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006457
"protein folding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA;ISO] [GO:0010952 "positive regulation of peptidase
activity" evidence=ISO] [GO:0016504 "peptidase activator activity"
evidence=IEA;ISO] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA;ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 RGD:1304883
GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
GO:GO:0046872 GO:GO:0016504 GO:GO:0042645 GO:GO:0051603
GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 CTD:10845 HOVERGEN:HBG004940 OMA:KSIIKEP
OrthoDB:EOG46DM2G GO:GO:0009841 GeneTree:ENSGT00390000017625
EMBL:BC085867 IPI:IPI00196478 RefSeq:NP_001007804.1
UniGene:Rn.203913 HSSP:O25926 ProteinModelPortal:Q5U2U0 SMR:Q5U2U0
STRING:Q5U2U0 PhosphoSite:Q5U2U0 PRIDE:Q5U2U0
Ensembl:ENSRNOT00000048302 GeneID:300786 KEGG:rno:300786
UCSC:RGD:1304883 InParanoid:Q5U2U0 NextBio:647505
ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0 Uniprot:Q5U2U0
Length = 633
Score = 759 (272.2 bits), Expect = 5.8e-82, Sum P(2) = 5.8e-82
Identities = 164/332 (49%), Positives = 224/332 (67%)
Query: 155 NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLY 214
+D+I +LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D T LTQAGYVGED ESV+
Sbjct: 279 HDDI-KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIA 337
Query: 215 KLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
KLL A+++VE AQ+GIV++DEVDKI + RDV GEGVQQ LLK+LEGT+VNVP
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVP- 396
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAP--VRANMRTG 332
+ RK RG+ + +DT +ILF+ GAF GL++ IS R+ + +GFG P + R
Sbjct: 397 -EKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTPSNLGKGRRAA 454
Query: 333 GLTDALVTSS-------------LLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQL 379
D S LL V++ DL+ +G+IPEF+GR P++V L +L+E L
Sbjct: 455 AAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVPLHSLDEKTL 514
Query: 380 VQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTE 439
VQ+L EP+NA+ QY+ +FSM+ +L+ T+DAL+ IA+ A+ + TGARGLR+++E +L E
Sbjct: 515 VQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLRSIMEKLLLE 574
Query: 440 AMFEIPETKIGTSSVNAVLVDKEAVGSVDAPG 471
MFE+P S + V VDKE V PG
Sbjct: 575 PMFEVPN-----SDIVCVEVDKEVVEGKKEPG 601
Score = 82 (33.9 bits), Expect = 5.8e-82, Sum P(2) = 5.8e-82
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 73 PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
P PK+I LD++V+GQ AKK V+ AVYNHYKRIY++
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKK-------------VLSV--AVYNHYKRIYNN 204
>UNIPROTKB|Q5U2U0 [details] [associations]
symbol:Clpx "ATP-dependent Clp protease ATP-binding subunit
clpX-like, mitochondrial" species:10116 "Rattus norvegicus"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0009841 "mitochondrial endopeptidase Clp complex" evidence=IEA]
[GO:0016504 "peptidase activator activity" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 RGD:1304883 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0046872 GO:GO:0016504
GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
GeneTree:ENSGT00390000017625 EMBL:BC085867 IPI:IPI00196478
RefSeq:NP_001007804.1 UniGene:Rn.203913 HSSP:O25926
ProteinModelPortal:Q5U2U0 SMR:Q5U2U0 STRING:Q5U2U0
PhosphoSite:Q5U2U0 PRIDE:Q5U2U0 Ensembl:ENSRNOT00000048302
GeneID:300786 KEGG:rno:300786 UCSC:RGD:1304883 InParanoid:Q5U2U0
NextBio:647505 ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0
Uniprot:Q5U2U0
Length = 633
Score = 759 (272.2 bits), Expect = 5.8e-82, Sum P(2) = 5.8e-82
Identities = 164/332 (49%), Positives = 224/332 (67%)
Query: 155 NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLY 214
+D+I +LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D T LTQAGYVGED ESV+
Sbjct: 279 HDDI-KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIA 337
Query: 215 KLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
KLL A+++VE AQ+GIV++DEVDKI + RDV GEGVQQ LLK+LEGT+VNVP
Sbjct: 338 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVP- 396
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAP--VRANMRTG 332
+ RK RG+ + +DT +ILF+ GAF GL++ IS R+ + +GFG P + R
Sbjct: 397 -EKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTPSNLGKGRRAA 454
Query: 333 GLTDALVTSS-------------LLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQL 379
D S LL V++ DL+ +G+IPEF+GR P++V L +L+E L
Sbjct: 455 AAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVPLHSLDEKTL 514
Query: 380 VQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTE 439
VQ+L EP+NA+ QY+ +FSM+ +L+ T+DAL+ IA+ A+ + TGARGLR+++E +L E
Sbjct: 515 VQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLRSIMEKLLLE 574
Query: 440 AMFEIPETKIGTSSVNAVLVDKEAVGSVDAPG 471
MFE+P S + V VDKE V PG
Sbjct: 575 PMFEVPN-----SDIVCVEVDKEVVEGKKEPG 601
Score = 82 (33.9 bits), Expect = 5.8e-82, Sum P(2) = 5.8e-82
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 73 PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
P PK+I LD++V+GQ AKK V+ AVYNHYKRIY++
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKK-------------VLSV--AVYNHYKRIYNN 204
>MGI|MGI:1346017 [details] [associations]
symbol:Clpx "caseinolytic peptidase X (E.coli)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006457 "protein folding" evidence=IEA] [GO:0009841
"mitochondrial endopeptidase Clp complex" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=ISO]
[GO:0016504 "peptidase activator activity" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=ISO] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
MGI:MGI:1346017 GO:GO:0005524 GO:GO:0005634 GO:GO:0006457
GO:GO:0005743 GO:GO:0046872 GO:GO:0016504 GO:GO:0016887
GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
EMBL:AJ276991 EMBL:AF134983 EMBL:AC110235 IPI:IPI00119808
RefSeq:NP_035932.2 UniGene:Mm.30088 ProteinModelPortal:Q9JHS4
SMR:Q9JHS4 STRING:Q9JHS4 PhosphoSite:Q9JHS4 PaxDb:Q9JHS4
PRIDE:Q9JHS4 Ensembl:ENSMUST00000015501 GeneID:270166
KEGG:mmu:270166 UCSC:uc009qdb.1 GeneTree:ENSGT00390000017625
InParanoid:Q9JHS4 ChiTaRS:CLPX NextBio:393279 Bgee:Q9JHS4
CleanEx:MM_CLPX Genevestigator:Q9JHS4 GermOnline:ENSMUSG00000015357
Uniprot:Q9JHS4
Length = 634
Score = 758 (271.9 bits), Expect = 7.4e-82, Sum P(2) = 7.4e-82
Identities = 162/340 (47%), Positives = 225/340 (66%)
Query: 147 KSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVG 206
+ G + + ++LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D T LTQAGYVG
Sbjct: 271 RGGEVLDSSQDDIKLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVG 330
Query: 207 EDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLE 266
ED ESV+ KLL A+++VE AQ+GIV++DEVDKI + RDV GEGVQQ LLK+LE
Sbjct: 331 EDIESVIAKLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLE 390
Query: 267 GTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAP-- 324
GT+VNVP + RK RG+ + +DT ++LF+ GAF GL++ IS R+ + +GFG P
Sbjct: 391 GTIVNVP--EKNSRKL-RGETVQVDTTNVLFVASGAFNGLDRIISRRKNEKYLGFGTPSN 447
Query: 325 VRANMRTGGLTDALVTSS-------------LLESVDSGDLVAYGLIPEFIGRFPILVSL 371
+ R D S LL V++ DL+ +G+IPEF+GR P++V L
Sbjct: 448 LGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVPL 507
Query: 372 SALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRA 431
+L+E LVQ+L EP+NA+ QY+ +FSM+ +L+ T+DAL+ IA+ A+ + TGARGLR+
Sbjct: 508 HSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLRS 567
Query: 432 LLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSVDAPG 471
++E +L E MFE+P S + V VDKE V PG
Sbjct: 568 IMEKLLLEPMFEVPN-----SDIVCVEVDKEVVEGKKEPG 602
Score = 82 (33.9 bits), Expect = 7.4e-82, Sum P(2) = 7.4e-82
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 73 PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
P PK+I LD++V+GQ AKK V+ AVYNHYKRIY++
Sbjct: 168 PPPKKIYNYLDKYVVGQSFAKK-------------VLSV--AVYNHYKRIYNN 205
>UNIPROTKB|F1NA92 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0009841
"mitochondrial endopeptidase Clp complex" evidence=IEA] [GO:0016504
"peptidase activator activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AADN02038940
IPI:IPI00651275 Ensembl:ENSGALT00000011804 ArrayExpress:F1NA92
Uniprot:F1NA92
Length = 630
Score = 758 (271.9 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 164/334 (49%), Positives = 229/334 (68%)
Query: 155 NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLY 214
ND+I +LEKSN+LL+GPTGSGKTLLA+TLA+ ++VPF I D T LTQAGYVGED ESV+
Sbjct: 276 NDDI-KLEKSNILLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIA 334
Query: 215 KLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
KLL A+++VE AQ+GIV++DEVDKI + RDV GEGVQQ LLK+LEGT+VNVP
Sbjct: 335 KLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVP- 393
Query: 275 PDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANM----R 330
+ RK RG+ + +DT +ILF+ GAF GL++ IS R+ + +GFG P +NM R
Sbjct: 394 -EKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTP--SNMGKGRR 449
Query: 331 TGGLTDALVTSS-------------LLESVDSGDLVAYGLIPEFIGRFPILVSLSALNED 377
D S LL V++ DL+ +G+IPEF+GR P++V L +L+E
Sbjct: 450 AAAAADLANISGESNTHEDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVPLHSLDEK 509
Query: 378 QLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENIL 437
LV++L EP+NA+ QY+ +FSM+ +L+ T+DAL+ IA+ A+ + TGARGLR+++E +L
Sbjct: 510 TLVRILTEPRNAVVPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLRSIMEKLL 569
Query: 438 TEAMFEIPETKIGTSSVNAVLVD-KEAVGSVDAP 470
E MFE+P + I V+ +V+ K+ G + AP
Sbjct: 570 LEPMFEVPNSDIVCVEVDKDVVEGKKEPGYIRAP 603
Score = 78 (32.5 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 73 PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
P PK+I LD++V+GQ AKK V+ AVYNHYKRIY++
Sbjct: 164 PPPKKIYNYLDKYVVGQCFAKK-------------VLSV--AVYNHYKRIYNN 201
>UNIPROTKB|E1BX77 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
GO:GO:0006457 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625
EMBL:AADN02038940 IPI:IPI00820856 Ensembl:ENSGALT00000038419
ArrayExpress:E1BX77 Uniprot:E1BX77
Length = 617
Score = 749 (268.7 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 164/335 (48%), Positives = 229/335 (68%)
Query: 155 NDEIVELEKSNVLLMGPTGS-GKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVL 213
ND+I +LEKSN+LL+GPTGS GKTLLA+TLA+ ++VPF I D T LTQAGYVGED ESV+
Sbjct: 262 NDDI-KLEKSNILLLGPTGSAGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVI 320
Query: 214 YKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVP 273
KLL A+++VE AQ+GIV++DEVDKI + RDV GEGVQQ LLK+LEGT+VNVP
Sbjct: 321 AKLLQDANYNVEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVP 380
Query: 274 IPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANM---- 329
+ RK RG+ + +DT +ILF+ GAF GL++ IS R+ + +GFG P +NM
Sbjct: 381 --EKNSRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTP--SNMGKGR 435
Query: 330 RTGGLTDALVTSS-------------LLESVDSGDLVAYGLIPEFIGRFPILVSLSALNE 376
R D S LL V++ DL+ +G+IPEF+GR P++V L +L+E
Sbjct: 436 RAAAAADLANISGESNTHEDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPVVVPLHSLDE 495
Query: 377 DQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENI 436
LV++L EP+NA+ QY+ +FSM+ +L+ T+DAL+ IA+ A+ + TGARGLR+++E +
Sbjct: 496 KTLVRILTEPRNAVVPQYQALFSMDKCELNVTEDALKAIARLALERKTGARGLRSIMEKL 555
Query: 437 LTEAMFEIPETKIGTSSVNAVLVD-KEAVGSVDAP 470
L E MFE+P + I V+ +V+ K+ G + AP
Sbjct: 556 LLEPMFEVPNSDIVCVEVDKDVVEGKKEPGYIRAP 590
Score = 78 (32.5 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 73 PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
P PK+I LD++V+GQ AKK V+ AVYNHYKRIY++
Sbjct: 164 PPPKKIYNYLDKYVVGQCFAKK-------------VLSV--AVYNHYKRIYNN 201
>FB|FBgn0038745 [details] [associations]
symbol:CG4538 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0009368
"endopeptidase Clp complex" evidence=ISS] [GO:0004252 "serine-type
endopeptidase activity" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0006457 "protein folding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051082 "unfolded
protein binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
GeneTree:ENSGT00390000017625 HSSP:O25926 RefSeq:NP_732463.1
UniGene:Dm.2399 ProteinModelPortal:Q8IN64 SMR:Q8IN64 STRING:Q8IN64
PaxDb:Q8IN64 PRIDE:Q8IN64 EnsemblMetazoa:FBtr0083856 GeneID:42369
KEGG:dme:Dmel_CG4538 UCSC:CG4538-RB FlyBase:FBgn0038745
InParanoid:Q8IN64 OrthoDB:EOG4RBP0W GenomeRNAi:42369 NextBio:828465
ArrayExpress:Q8IN64 Bgee:Q8IN64 Uniprot:Q8IN64
Length = 673
Score = 735 (263.8 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
Identities = 165/372 (44%), Positives = 231/372 (62%)
Query: 143 GSGVKSGNCNVENDEI-VELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQ 201
G +SG+ ++ V+LEKSN++++GPTGSGKTL+A+T+A+ ++VPF I D T LTQ
Sbjct: 306 GGDNRSGSEILDRQSTDVKLEKSNIIMLGPTGSGKTLIAQTIAKCLDVPFAICDCTTLTQ 365
Query: 202 AGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQAL 261
AGYVGED ESV+ KLL A+++VE AQ GIV++DEVDKI + RDV GEGVQQ +
Sbjct: 366 AGYVGEDIESVISKLLQDANYNVERAQTGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGM 425
Query: 262 LKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGF 321
LKMLEGTVVNVP N PRK RG+ + +DT +ILF+ GA+ GL++ I+ R + +GF
Sbjct: 426 LKMLEGTVVNVP-ERNSPRKL-RGETVQVDTTNILFVASGAYTGLDRLIARRLNEKYLGF 483
Query: 322 GAPV------RANMRTGGL--TDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSA 373
G P RA D L V + DLV +G+IPEF+GRFP++V +
Sbjct: 484 GMPSTSGSGRRAAQSAASPMDNDQEERDKCLTKVQARDLVEFGMIPEFVGRFPVIVPFHS 543
Query: 374 LNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALL 433
LN LV++L EP+NAL QYK + ++ V L FT+DA++ IA+ AM ++TGARGLR+++
Sbjct: 544 LNVSMLVRILTEPRNALVPQYKALLGLDEVDLTFTEDAVKSIAQLAMERHTGARGLRSIM 603
Query: 434 ENILTEAMFEIPETKIGTSSVNAVLVDKEAVG--SVDAPGCGAKILHGDGELERVLHETK 491
E +L + MF +P + I + A V A S DA + + D + +
Sbjct: 604 EQLLLDPMFIVPGSDIRGVHITADYVKGSATPEYSRDADAAASGTVATDSDTTT---DND 660
Query: 492 SAHENDSEVLLK 503
EN +V LK
Sbjct: 661 KNFENSEKVRLK 672
Score = 80 (33.2 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 73 PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
P P++I + LD+ V+GQ+ AKK V+ AVYNHYKRI+H+
Sbjct: 190 PPPQKIMEYLDKHVVGQDFAKK-------------VLAV--AVYNHYKRIHHN 227
>UNIPROTKB|F1SJL5 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0051082 "unfolded protein binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:CU856492
Ensembl:ENSSSCT00000005437 Uniprot:F1SJL5
Length = 619
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 183/430 (42%), Positives = 259/430 (60%)
Query: 73 PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIY-HSSLQ-KE 130
P PK+I LD++V+GQ AKK + + + + A + +SL +E
Sbjct: 167 PPPKKIYNYLDKYVVGQSFAKKV-LSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPRE 225
Query: 131 L-----VSDH---------LYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGK 176
L +S H V+ + + G + + ++LEKSN+LL+GPTGSGK
Sbjct: 226 LLQIAGISPHGNALGASMQQQVNQQIPQEKRGGEVLDSSHDDIKLEKSNILLLGPTGSGK 285
Query: 177 TLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDE 236
TLLA+TLA+ ++VPF I D T LTQAGYVGED ESV+ KLL A+++VE AQ+GIV++DE
Sbjct: 286 TLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLDE 345
Query: 237 VDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDIL 296
VDKI + RDV GEGVQQ LLK+LEGT+VNVP + RK RG+ + +DT +IL
Sbjct: 346 VDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVP--EKNSRKL-RGETVQVDTTNIL 402
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAP--VRANMRTGGLTDALVTSS------------ 342
F+ GAF GL++ IS R+ + +GFG P + R D S
Sbjct: 403 FVASGAFNGLDRIISRRKNEKYLGFGTPSNLGKGRRAAAAADLANRSGESNTHQDIEEKD 462
Query: 343 -LLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMN 401
LL V++ DL+ +G+IPEF+GR P++V L +L+E LVQ+L EP+NA+ QY+ +FSM+
Sbjct: 463 RLLRHVEARDLIEFGMIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMD 522
Query: 402 NVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDK 461
+L+ T+DAL+ IA+ A+ + TGARGLR+++E +L E MFE+P S + V VDK
Sbjct: 523 KCELNVTEDALKAIARLALERKTGARGLRSIMEKLLLEPMFEVPN-----SDIVCVEVDK 577
Query: 462 EAVGSVDAPG 471
E V PG
Sbjct: 578 EVVEGKKEPG 587
>ZFIN|ZDB-GENE-040912-143 [details] [associations]
symbol:clpx "ClpX caseinolytic peptidase X homolog
(E. coli)" species:7955 "Danio rerio" [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
ZFIN:ZDB-GENE-040912-143 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845
HOVERGEN:HBG004940 OrthoDB:EOG46DM2G EMBL:BC081643 IPI:IPI00494396
RefSeq:NP_001004581.1 UniGene:Dr.4306 ProteinModelPortal:Q66HW5
STRING:Q66HW5 GeneID:447842 KEGG:dre:447842 NextBio:20832363
ArrayExpress:Q66HW5 Bgee:Q66HW5 Uniprot:Q66HW5
Length = 610
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 157/321 (48%), Positives = 225/321 (70%)
Query: 159 VELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLA 218
++LEKSN++L+GPTGSGKTLLA+TLA+ ++VPF I D T LTQAGYVGED ESV+ KLL
Sbjct: 258 IKLEKSNIVLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQ 317
Query: 219 AADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNG 278
A++ +E AQ+GIV++DEVDKI + RDV GEGVQQ LLK+LEGT+VNVP +
Sbjct: 318 DANYVIEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVP--EKN 375
Query: 279 PRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAP----------VRAN 328
RK RG+ + +DT +ILF+ GAF GL++ IS R+ + +GFG P A+
Sbjct: 376 TRKL-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTPSNMGKGRRAAAAAD 434
Query: 329 MR--TGGLTDALVT----SSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQV 382
+ TGG DA+ LL+ V++ DL+ +G+IPEF+GR P++V L +L+E+ LV++
Sbjct: 435 LANTTGGEVDAVAEIEEKDRLLKHVEARDLIEFGMIPEFVGRLPVVVPLHSLDEETLVRI 494
Query: 383 LMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMF 442
L EP+NA+ QY+ +FSM+ +L+ T DALR IA+ A+ + TGARGLR+++E +L + MF
Sbjct: 495 LTEPRNAVVPQYQALFSMDKCELNMTPDALRAIARLALERKTGARGLRSIMEKLLLDPMF 554
Query: 443 EIPETKIGTSSVNAVLVDKEA 463
E+P + I + V+ +V +A
Sbjct: 555 EVPHSDIVSVDVSKDVVQGKA 575
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 130/291 (44%), Positives = 179/291 (61%)
Query: 73 PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS----SLQ 128
P PK+I LD++V+GQ+ AKK V+ AVYNHYKRIY++ S Q
Sbjct: 156 PPPKKIFAYLDKYVVGQDHAKK-------------VLSV--AVYNHYKRIYNNMPAGSRQ 200
Query: 129 KELVSDH---------LYVDSI------LGSGV-----------KSGNCNVENDEI-VEL 161
+++ + L + I LG+ + K G +++ ++L
Sbjct: 201 QQVEVEKQASLTPRELLQIAGISPHGNALGASMQQQLNQQTPPEKRGGEVLDSTHTDIKL 260
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
EKSN++L+GPTGSGKTLLA+TLA+ ++VPF I D T LTQAGYVGED ESV+ KLL A+
Sbjct: 261 EKSNIVLLGPTGSGKTLLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDAN 320
Query: 222 FDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRK 281
+ +E AQ+GIV++DEVDKI + RDV GEGVQQ LLK+LEGT+VNVP + RK
Sbjct: 321 YVIEKAQQGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVP--EKNTRK 378
Query: 282 HPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTG 332
RG+ + +DT +ILF+ GAF GL++ IS R+ + +GFG P +NM G
Sbjct: 379 L-RGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFGTP--SNMGKG 426
>WB|WBGene00008412 [details] [associations]
symbol:D2030.2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006457
"protein folding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
GeneTree:ENSGT00390000017625 HSSP:O25926 EMBL:Z73906 OMA:QMASSEL
PIR:T20353 RefSeq:NP_001021076.1 ProteinModelPortal:P90788
SMR:P90788 STRING:P90788 PaxDb:P90788 PRIDE:P90788
EnsemblMetazoa:D2030.2a.1 EnsemblMetazoa:D2030.2a.2
EnsemblMetazoa:D2030.2a.3 GeneID:172511 KEGG:cel:CELE_D2030.2
UCSC:D2030.2a.1 CTD:172511 WormBase:D2030.2a InParanoid:P90788
NextBio:875833 ArrayExpress:P90788 Uniprot:P90788
Length = 586
Score = 694 (249.4 bits), Expect = 2.9e-74, Sum P(2) = 2.9e-74
Identities = 150/317 (47%), Positives = 211/317 (66%)
Query: 154 ENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVL 213
E ++ V LEKSNVLL+GP+G GKT L +TLAR+++VP + D T++TQAGYVGED ESV+
Sbjct: 248 EKEQSVRLEKSNVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVI 307
Query: 214 YKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNG--RDVSGEGVQQALLKMLEGTVVN 271
KL+ AA +VE AQ+GIV++DEVDKI A ++ RDVSGEGVQ ALLK++EGTVVN
Sbjct: 308 QKLVQAAGGNVEKAQQGIVFLDEVDKIAAAHEGHSAAYRDVSGEGVQHALLKLVEGTVVN 367
Query: 272 VPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMR- 330
V G D + IDT DILFI GAF L+K + R ++GFG N+R
Sbjct: 368 VKSGKKGMGSQQ--DQVQIDTTDILFIASGAFSNLDKIVGRRLDKKALGFGTS-SGNVRI 424
Query: 331 TGGLTDALVT---SSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPK 387
+G +++ V LL D GDL+++G++PE +GRFP+LV + ++ LV+V+ EP+
Sbjct: 425 SGDDSNSEVMRKRDELLSKADQGDLISFGMVPELVGRFPVLVPFHSFDKQMLVRVMTEPQ 484
Query: 388 NALGRQYKKMFSMNNVKLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPET 447
N+L Q K F ++NV L F+ +AL +A+ A+ + TGAR LR++LE L EA F +P +
Sbjct: 485 NSLLAQLKLQFGIDNVDLSFSAEALEQVAQLALDRKTGARALRSILEAALLEAKFTVPGS 544
Query: 448 KIGTSSVN--AVLVDKE 462
I + V+ A+L +KE
Sbjct: 545 DIESVHVSREAILGEKE 561
Score = 74 (31.1 bits), Expect = 2.9e-74, Sum P(2) = 2.9e-74
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 73 PTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHS 125
P P +I + LD+FV+GQ++AKK+ +G VY HY+R+ H+
Sbjct: 128 PYPTQIAEYLDKFVVGQKKAKKT-----------LAVG----VYQHYRRLEHN 165
>SGD|S000000431 [details] [associations]
symbol:MCX1 "Mitochondrial matrix protein" species:4932
"Saccharomyces cerevisiae" [GO:0005759 "mitochondrial matrix"
evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0042026 "protein refolding" evidence=IMP]
[GO:0006457 "protein folding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
SGD:S000000431 GO:GO:0005524 GO:GO:0005759 EMBL:BK006936
GO:GO:0017111 GO:GO:0042026 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625 EMBL:Z36096
PIR:S46103 RefSeq:NP_009786.1 ProteinModelPortal:P38323 SMR:P38323
DIP:DIP-6422N IntAct:P38323 MINT:MINT-4477678 STRING:P38323
PaxDb:P38323 EnsemblFungi:YBR227C GeneID:852528 KEGG:sce:YBR227C
CYGD:YBR227c OMA:QMASSEL OrthoDB:EOG4FXVH6 NextBio:971574
Genevestigator:P38323 GermOnline:YBR227C Uniprot:P38323
Length = 520
Score = 446 (162.1 bits), Expect = 6.8e-65, Sum P(2) = 6.8e-65
Identities = 119/278 (42%), Positives = 163/278 (58%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSL--- 127
++PTPK + K LDE+++GQE KK V+ AVYNHY RI
Sbjct: 35 NIPTPKALKKFLDEYIVGQEIGKK-------------VLSV--AVYNHYLRINDKQKKGE 79
Query: 128 ---QKELVSDHLYVDSI---LGSG---VKSGNCNVEN---------DEIVELEKSNVLLM 169
Q+EL+ D + SG K+G N++ DE +EL KSNVL++
Sbjct: 80 LQRQRELMEREKIADDRDEPIFSGNSESKAGWRNLQRQFNLAGREVDEDLELSKSNVLVV 139
Query: 170 GPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQR 229
GP+GSGKTLLA TLA+I+NVP ITD T LTQAGY+GED E + +LL A+FDV A++
Sbjct: 140 GPSGSGKTLLATTLAKILNVPIAITDCTQLTQAGYIGEDVEVCIERLLVNAEFDVARAEK 199
Query: 230 GIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHP------ 283
GI+ +DE+DK+ K + +DVSGEGVQQ+LLK++EG V + + P KH
Sbjct: 200 GIIVLDEIDKLAKPAASIGTKDVSGEGVQQSLLKIIEGHKVEITV--KRPVKHDIDGQKN 257
Query: 284 ----RGDNI-PIDTKDILFICGGAFVGLEKTISERRQD 316
+ D + +DT +ILF+ GAFVGL+K I +R +D
Sbjct: 258 QTTTKKDEVFVVDTSNILFMIMGAFVGLDKHIVKRIED 295
Score = 233 (87.1 bits), Expect = 6.8e-65, Sum P(2) = 6.8e-65
Identities = 57/158 (36%), Positives = 86/158 (54%)
Query: 351 DLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDD 410
DLV++GLIPE IGR PI+ +L L D L +L EPKNAL QY+ +F V+L T
Sbjct: 349 DLVSFGLIPELIGRVPIITALQPLQRDDLFHILKEPKNALLDQYEYIFKQFGVRLCVTQK 408
Query: 411 ALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVD--KEAVGSVD 468
AL+ +A+ A+ + TGARGLR ++E +L ++ P + I ++ VD +E S+
Sbjct: 409 ALKKVAQFALKEGTGARGLRGIMERLLLNVNYDCPGSNIAYVLIDEATVDSLQETEHSL- 467
Query: 469 APGCGAKILHGDGELERVLHETKSAHENDSEVLLKSPG 506
A K GD E + ++ + + +L K G
Sbjct: 468 ASQVDVKYYSGD-EKDSLIRDVSEEDKKLGVMLEKELG 504
>ASPGD|ASPL0000057717 [details] [associations]
symbol:AN0349 species:162425 "Emericella nidulans"
[GO:0042026 "protein refolding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
GO:GO:0006457 EMBL:BN001308 GO:GO:0006508 GO:GO:0017111
GO:GO:0008233 EMBL:AACD01000006 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 OrthoDB:EOG4FXVH6 RefSeq:XP_657953.1
ProteinModelPortal:Q5BGI1 STRING:Q5BGI1
EnsemblFungi:CADANIAT00002357 GeneID:2876125 KEGG:ani:AN0349.2
OMA:DAMFETP Uniprot:Q5BGI1
Length = 630
Score = 372 (136.0 bits), Expect = 9.6e-65, Sum P(3) = 9.6e-65
Identities = 71/135 (52%), Positives = 103/135 (76%)
Query: 150 NCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDA 209
N ++ +++EKSNVLL+GP+G GKTL+ ++LAR+++VPF+I+D T TQAGY+G+DA
Sbjct: 187 NAEIDESSQLQIEKSNVLLLGPSGVGKTLMCRSLARVLSVPFSISDCTPFTQAGYIGDDA 246
Query: 210 ESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTV 269
E +++LLAAA++DVE A+RGI+ +DE+DKI A+ ++GRDV G GVQ++LLK+LEGT
Sbjct: 247 EVCVHRLLAAANYDVEQAERGIIVLDEIDKIAAAKV-SHGRDVGGSGVQESLLKLLEGTT 305
Query: 270 VNVPIPDNGPRKHPR 284
V V R PR
Sbjct: 306 VQVQAKQE--RSAPR 318
Score = 251 (93.4 bits), Expect = 9.6e-65, Sum P(3) = 9.6e-65
Identities = 62/153 (40%), Positives = 88/153 (57%)
Query: 344 LESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNV 403
L+ ++ DL YG IPE +GR P+ +LSAL++ LV++L EP+N+L QY +FS++ +
Sbjct: 449 LDLINQTDLQNYGFIPELVGRIPVNAALSALSQPLLVRILTEPRNSLVAQYTTLFSLSGI 508
Query: 404 KLHFTDDALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEA 463
+L FT AL IA A TGAR LR +E IL++AMFE P G SSV VLV +
Sbjct: 509 ELRFTTPALHKIAANAFTMGTGARALRTEMETILSDAMFETP----G-SSVKFVLVTENV 563
Query: 464 VGSVDAPGCGAKILHGDGELERVLHETKSAHEN 496
+ P + G G+ R H +A E+
Sbjct: 564 AERKEKP-----VYLGRGQGSR-FHSMIAAEED 590
Score = 125 (49.1 bits), Expect = 1.8e-31, Sum P(3) = 1.8e-31
Identities = 34/90 (37%), Positives = 44/90 (48%)
Query: 249 GRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKH-----PRGDNIP-------IDTKDIL 296
G V + Q+ L GT + P NGP + P G N+P + T +IL
Sbjct: 303 GTTVQVQAKQERSAPRLSGTTSS-SYPPNGPLGNTPFTPPGGGNVPHKGEVYNVRTDNIL 361
Query: 297 FICGGAFVGLEKTISERRQDSSIGFGAPVR 326
FIC GAF GL K + +R S+GFG PVR
Sbjct: 362 FICSGAFAGLHKVVMDRISRGSMGFGQPVR 391
Score = 83 (34.3 bits), Expect = 9.6e-65, Sum P(3) = 9.6e-65
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 74 TPKEICKGLDEFVIGQERAKKSHIFCILVDMLVYVIGACCAVYNHYKRIYHSSLQKE 130
TPK + + LD+FV+GQERAKK I + AVYNHY+R+ ++E
Sbjct: 80 TPKSLKQYLDQFVVGQERAKK--ILSV-------------AVYNHYQRVQELQRRQE 121
>WB|WBGene00019461 [details] [associations]
symbol:K07A3.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 PANTHER:PTHR11262:SF4
GeneTree:ENSGT00390000017625 EMBL:FO080962 GeneID:171817
KEGG:cel:CELE_K07A3.3 CTD:171817 RefSeq:NP_001021562.1
ProteinModelPortal:Q65XY4 SMR:Q65XY4 STRING:Q65XY4 PRIDE:Q65XY4
EnsemblMetazoa:K07A3.3b UCSC:K07A3.3b WormBase:K07A3.3b
InParanoid:Q65XY4 OMA:PFHCLDK NextBio:872825 ArrayExpress:Q65XY4
Uniprot:Q65XY4
Length = 518
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 145/399 (36%), Positives = 234/399 (58%)
Query: 75 PKEICKGLDEFVIGQERAKK-------SHIFCILVDMLV---YVIGACCAVYNHYKRIYH 124
PKEI + L+++V+GQE AKK H + ++ V +++ A K++
Sbjct: 101 PKEIVEHLNKYVVGQEEAKKYLAVAVYQHYRRVENNLRVTEQWMLSEAVAAAKERKKMRK 160
Query: 125 SSLQKELVSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTLA 184
+ ++E YV +K ++E + + L+KSN++L+G +G+GKT + + LA
Sbjct: 161 QNPEEEEYYPE-YVQKSQRQILK----DLEKRQDMILDKSNMILLGASGTGKTFMTQKLA 215
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAE 244
+++VP I D T LTQAGYVG+D ++V+ KLLA A D+E QRGIV++DE DKI +
Sbjct: 216 EVLDVPIVICDCTTLTQAGYVGDDVDTVIQKLLAEAMGDIEKCQRGIVFLDEFDKIYTSS 275
Query: 245 S---RNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGG 301
+ RDVSG+GVQQALLK++EG++V V P P + IDT +ILFI G
Sbjct: 276 DPLHTSGNRDVSGKGVQQALLKLVEGSLVKVRDP-LAPNS-----KVTIDTSNILFIASG 329
Query: 302 AFVGLEKTISERRQDSSIGF---GAPVRANMR--TGGLTDA---LVTSS---LLESVDSG 350
AF +E ++ R S+GF +P + + T L D+ +V+ + +++ D G
Sbjct: 330 AFSNIEHIVARRMDKRSLGFLSATSPHKLGDQDTTEKLRDSDEEIVSKARNEMIKQCDQG 389
Query: 351 DLVAYGLIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDD 410
DL+++G+IPE +GRFP++V L++ L+ VL EP+ +L Q KK F NV+L F+
Sbjct: 390 DLISFGMIPELVGRFPVIVPFHCLDKTHLMSVLTEPRGSLIAQTKKFFENENVELRFSPA 449
Query: 411 ALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPETKI 449
A+ IA+ A+ + TGAR L++++E + A +E+P + +
Sbjct: 450 AIEAIAEMAVKRKTGARALKSIVEKAVMNAKYEVPGSDV 488
>TIGR_CMR|CBU_2012 [details] [associations]
symbol:CBU_2012 "heat shock protein HslVU, ATPase subunit
HslU" species:227377 "Coxiella burnetii RSA 493" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
GO:GO:0016887 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:NP_820987.2 ProteinModelPortal:Q83A94
SMR:Q83A94 PRIDE:Q83A94 GeneID:1209925 KEGG:cbu:CBU_2012
PATRIC:17932769 BioCyc:CBUR227377:GJ7S-1986-MONOMER Uniprot:Q83A94
Length = 447
Score = 182 (69.1 bits), Expect = 5.8e-32, Sum P(4) = 5.8e-32
Identities = 41/111 (36%), Positives = 64/111 (57%)
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
L+PE GRFPI V L AL D V++L EPK +L QY ++ N L FT D ++ +A
Sbjct: 322 LVPELQGRFPIRVELKALTADDFVRILTEPKASLTEQYTELLKTENFGLSFTKDGIKRLA 381
Query: 417 KKAM-----AKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKE 462
+ A ++N GAR L ++E +L E FE + + + +++A V+K+
Sbjct: 382 EIAYQVNDRSENIGARRLHTIMERLLEEVSFEATDKQGESITIDADYVNKQ 432
Score = 138 (53.6 bits), Expect = 5.8e-32, Sum P(4) = 5.8e-32
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 160 ELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAA 219
E+ N+L++GPTG GKT +A+ L+ + PF +AT T+ GYVG D ES++ L+
Sbjct: 46 EIFPKNILMIGPTGVGKTEIARRLSDLAGAPFLKIEATKFTEVGYVGRDVESIIRDLVDV 105
Query: 220 A 220
A
Sbjct: 106 A 106
Score = 117 (46.2 bits), Expect = 5.8e-32, Sum P(4) = 5.8e-32
Identities = 26/43 (60%), Positives = 32/43 (74%)
Query: 228 QRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVV 270
Q GIV+IDE+DKIVK E G DVS EGVQ+ LL ++EG+ V
Sbjct: 253 QNGIVFIDEIDKIVKREGAV-GADVSREGVQRDLLPLVEGSTV 294
Score = 64 (27.6 bits), Expect = 5.8e-32, Sum P(4) = 5.8e-32
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 74 TPKEICKGLDEFVIGQERAKKS 95
TP+EI LD+F+IGQ AK++
Sbjct: 4 TPREIVAELDKFIIGQNDAKRA 25
>TIGR_CMR|CHY_1790 [details] [associations]
symbol:CHY_1790 "heat shock protein HslVU, ATPase subunit
HslU" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_00249
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004491
InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006950 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006200 GO:GO:0016887 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667
OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:YP_360610.1
ProteinModelPortal:Q3AB74 SMR:Q3AB74 STRING:Q3AB74 GeneID:3728442
KEGG:chy:CHY_1790 PATRIC:21276691
BioCyc:CHYD246194:GJCN-1789-MONOMER Uniprot:Q3AB74
Length = 461
Score = 174 (66.3 bits), Expect = 1.8e-30, Sum P(4) = 1.8e-30
Identities = 40/95 (42%), Positives = 55/95 (57%)
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPE GRFPI V L +L + ++L P+NAL +QY ++ + V L FT+D+L IA
Sbjct: 336 LIPELQGRFPIRVELKSLTVEDFKKILTVPENALTKQYVELLATEGVNLKFTEDSLEEIA 395
Query: 417 KKAMA-----KNTGARGLRALLENILTEAMFEIPE 446
K A +N GAR L +LE +L + F PE
Sbjct: 396 KMAYTVNERNENIGARRLITILEKVLEDLSFNAPE 430
Score = 143 (55.4 bits), Expect = 1.8e-30, Sum P(4) = 1.8e-30
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
DEI+ N+L++GPTG GKT +A+ LA+++ PF +AT T+ GYVG D E ++
Sbjct: 46 DEIIP---KNILMIGPTGVGKTEIARRLAKLIKAPFVKVEATKFTEVGYVGRDVEGMIRD 102
Query: 216 LL 217
L+
Sbjct: 103 LV 104
Score = 104 (41.7 bits), Expect = 1.8e-30, Sum P(4) = 1.8e-30
Identities = 31/78 (39%), Positives = 42/78 (53%)
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRG 285
A + GIV++DE+DKI +G DVS GVQ+ +L ++EG+ V + GP K
Sbjct: 265 AEEDGIVFLDEIDKIAST-GNTHGPDVSRGGVQRDILPIVEGSTV---LTKYGPVK---- 316
Query: 286 DNIPIDTKDILFICGGAF 303
T ILFI GAF
Sbjct: 317 ------TDHILFIAAGAF 328
Score = 68 (29.0 bits), Expect = 1.8e-30, Sum P(4) = 1.8e-30
Identities = 12/22 (54%), Positives = 19/22 (86%)
Query: 74 TPKEICKGLDEFVIGQERAKKS 95
TP++I + LD+++IGQE AKK+
Sbjct: 5 TPRQIVEYLDKYIIGQEAAKKA 26
>UNIPROTKB|P0A6H5 [details] [associations]
symbol:hslU species:83333 "Escherichia coli K-12"
[GO:0009408 "response to heat" evidence=IEP] [GO:0070011 "peptidase
activity, acting on L-amino acid peptides" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009376 "HslUV
protease complex" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006200 GO:GO:0016887 GO:GO:0009408
EMBL:L19201 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT
ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 PIR:JT0761
RefSeq:NP_418366.1 RefSeq:YP_491520.1 PDB:1DO0 PDB:1DO2 PDB:1E94
PDB:1G4A PDB:1G4B PDB:1HQY PDB:1HT1 PDB:1HT2 PDB:1YYF PDBsum:1DO0
PDBsum:1DO2 PDBsum:1E94 PDBsum:1G4A PDBsum:1G4B PDBsum:1HQY
PDBsum:1HT1 PDBsum:1HT2 PDBsum:1YYF ProteinModelPortal:P0A6H5
SMR:P0A6H5 DIP:DIP-31855N IntAct:P0A6H5 SWISS-2DPAGE:P0A6H5
PaxDb:P0A6H5 PRIDE:P0A6H5 EnsemblBacteria:EBESCT00000003987
EnsemblBacteria:EBESCT00000018172 GeneID:12932793 GeneID:948430
KEGG:ecj:Y75_p3256 KEGG:eco:b3931 PATRIC:32123377 EchoBASE:EB1827
EcoGene:EG11881 BioCyc:EcoCyc:EG11881-MONOMER
BioCyc:ECOL316407:JW3902-MONOMER EvolutionaryTrace:P0A6H5
Genevestigator:P0A6H5 Uniprot:P0A6H5
Length = 443
Score = 152 (58.6 bits), Expect = 3.4e-30, Sum P(4) = 3.4e-30
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 155 NDEIV-ELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVL 213
N+E+ E+ N+L++GPTG GKT +A+ LA++ N PF +AT T+ GYVG++ +S++
Sbjct: 41 NEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSII 100
Query: 214 YKLLAAA 220
L AA
Sbjct: 101 RDLTDAA 107
Score = 151 (58.2 bits), Expect = 3.4e-30, Sum P(4) = 3.4e-30
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPE GR PI V L AL ++L EP ++ QYK + + V + FTD ++ IA
Sbjct: 318 LIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIA 377
Query: 417 KKAM-----AKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDK 461
+ A +N GAR L +LE ++ E ++ + +++A V K
Sbjct: 378 EAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADYVSK 427
Score = 121 (47.7 bits), Expect = 3.4e-30, Sum P(4) = 3.4e-30
Identities = 34/76 (44%), Positives = 43/76 (56%)
Query: 228 QRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
Q GIV+IDE+DKI K ++G DVS EGVQ+ LL ++EG V+ KH
Sbjct: 249 QHGIVFIDEIDKICK-RGESSGPDVSREGVQRDLLPLVEGCTVST--------KHGM--- 296
Query: 288 IPIDTKDILFICGGAF 303
+ T ILFI GAF
Sbjct: 297 --VKTDHILFIASGAF 310
Score = 65 (27.9 bits), Expect = 3.4e-30, Sum P(4) = 3.4e-30
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 74 TPKEICKGLDEFVIGQERAKKS 95
TP+EI LD+ +IGQ+ AK+S
Sbjct: 5 TPREIVSELDKHIIGQDNAKRS 26
>TIGR_CMR|SO_4163 [details] [associations]
symbol:SO_4163 "heat shock protein HslVU, ATPase subunit
HslU" species:211586 "Shewanella oneidensis MR-1" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0009376 "HslUV protease complex"
evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:NP_719692.1 ProteinModelPortal:Q8E9U9 SMR:Q8E9U9
GeneID:1171770 KEGG:son:SO_4163 PATRIC:23527956 Uniprot:Q8E9U9
Length = 440
Score = 148 (57.2 bits), Expect = 2.7e-28, Sum P(4) = 2.7e-28
Identities = 37/103 (35%), Positives = 54/103 (52%)
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPE GR PI V L AL D ++L EP +L QY + + V + FT+ + IA
Sbjct: 315 LIPELQGRLPIRVELDALTADDFKRILTEPHASLTEQYIALMATEGVIIEFTESGIESIA 374
Query: 417 KKAM-----AKNTGARGLRALLENILTEAMFEIPETKIGTSSV 454
K A +N GAR L ++E ++ + +E + K G+S V
Sbjct: 375 KAAWQVNERTENIGARRLHTVMEKLMEDISYEASD-KSGSSFV 416
Score = 143 (55.4 bits), Expect = 2.7e-28, Sum P(4) = 2.7e-28
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 160 ELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKL 216
E+ N+L++GPTG GKT +A+ LA++ N PF +AT T+ GYVG++ E ++ L
Sbjct: 47 EVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVEQIIRDL 103
Score = 117 (46.2 bits), Expect = 2.7e-28, Sum P(4) = 2.7e-28
Identities = 33/76 (43%), Positives = 41/76 (53%)
Query: 228 QRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
Q GIV++DE+DKI K +G DVS EGVQ+ LL ++EG V KH
Sbjct: 246 QNGIVFLDEIDKICK-RGETSGPDVSREGVQRDLLPLVEGCTVTT--------KHGM--- 293
Query: 288 IPIDTKDILFICGGAF 303
+ T ILFI GAF
Sbjct: 294 --VKTDHILFIASGAF 307
Score = 63 (27.2 bits), Expect = 2.7e-28, Sum P(4) = 2.7e-28
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 74 TPKEICKGLDEFVIGQERAKKS 95
TP+EI LD +IGQ++AK+S
Sbjct: 5 TPREIVHELDAHIIGQKKAKRS 26
>TIGR_CMR|NSE_0177 [details] [associations]
symbol:NSE_0177 "heat shock protein HslVU, ATPase subunit
HslU" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0009376 "HslUV protease
complex" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004491
InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006950 GO:GO:0006200 GO:GO:0016887
EMBL:CP000237 GenomeReviews:CP000237_GR InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:YP_506072.1 ProteinModelPortal:Q2GEM4 SMR:Q2GEM4
STRING:Q2GEM4 GeneID:3931406 KEGG:nse:NSE_0177 PATRIC:22680453
BioCyc:NSEN222891:GHFU-208-MONOMER Uniprot:Q2GEM4
Length = 472
Score = 167 (63.8 bits), Expect = 4.1e-28, Sum P(4) = 4.1e-28
Identities = 39/110 (35%), Positives = 62/110 (56%)
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
L+PE GR PI V L +L+ + ++++L E +++L +QY + V L FT D +R IA
Sbjct: 347 LLPELQGRLPIRVELDSLDVEDMIRILTETESSLLKQYCALLETEGVSLEFTKDGVRAIA 406
Query: 417 KKAMA-----KNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDK 461
+ A+ +N GAR L ++E +L E FE + T S++ VDK
Sbjct: 407 EAAITVNNEVENIGARRLHTIMETLLEEINFEANDNVGKTFSIDREYVDK 456
Score = 147 (56.8 bits), Expect = 4.1e-28, Sum P(4) = 4.1e-28
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 155 NDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLY 214
+DEI+ N+L++GPTG GKT +A+ +A++ PF +AT T+ GYVG D ES++
Sbjct: 68 HDEIIP---KNILMIGPTGVGKTEIARRVAKLSGAPFIKVEATKFTEVGYVGRDVESIIR 124
Query: 215 KLLAAADFDVEAAQR 229
L+ +A V+ +R
Sbjct: 125 DLVDSAVAQVKDQKR 139
Score = 98 (39.6 bits), Expect = 4.1e-28, Sum P(4) = 4.1e-28
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 229 RGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVV 270
RG+V+IDE+DKI A + G +V+ EGVQ+ LL +LEGT V
Sbjct: 280 RGMVFIDEIDKIC-ARTEVRG-EVNREGVQRDLLPLLEGTTV 319
Score = 56 (24.8 bits), Expect = 4.1e-28, Sum P(4) = 4.1e-28
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 75 PKEICKGLDEFVIGQERAKK 94
PK + LD FV+GQ+ AKK
Sbjct: 29 PKALVSYLDRFVVGQKLAKK 48
Score = 37 (18.1 bits), Expect = 8.4e-15, Sum P(3) = 8.4e-15
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 205 VGEDAESVLYKLLAAA 220
VG+DAE +L +AA
Sbjct: 13 VGQDAEHILEDAYSAA 28
>TIGR_CMR|SPO_3882 [details] [associations]
symbol:SPO_3882 "heat shock protein HslVU, ATPase subunit
HslU" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006200 GO:GO:0016887
InterPro:IPR019489 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_169070.1 ProteinModelPortal:Q5LLP0
SMR:Q5LLP0 GeneID:3196200 KEGG:sil:SPO3882 PATRIC:23381271
Uniprot:Q5LLP0
Length = 435
Score = 162 (62.1 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 61/207 (29%), Positives = 95/207 (45%)
Query: 160 ELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAA 219
E+ N+L++GPTG GKT +++ LA++ PF +AT T+ GYVG D E ++ L A
Sbjct: 47 EVYPKNILMIGPTGVGKTEISRRLAKLARAPFIKVEATKFTEVGYVGRDVEQIIRDLADA 106
Query: 220 ADFDVEAAQRGIV----YIDEVDKIVKAESRNNGRDVSGEGVQQALLK-MLEGTVVNVPI 274
A R V + D+++ A + + R+ + E ++ L L+ TV+ + +
Sbjct: 107 AIVQTRDYMRDEVRARAHKAAEDRVITAIAGEDAREGTREMFRKKLKSGELDDTVIELEV 166
Query: 275 PDNGPRKHPR-------GDNIPIDTKDILFICGGAFVGLEKTISERRQDS-SIGFGAPVR 326
D G P G N+ + LF G AF G R DS I G
Sbjct: 167 AD-GANPMPMFEIPGQPGGNMGMMNLGDLF--GKAFAGRTTRKKLRVADSYEILIGE--E 221
Query: 327 ANMRTGGLTDALVTSSLLESVDSGDLV 353
A+ L D LV + LE+V+ +V
Sbjct: 222 ADKL---LDDELVNKTALEAVEQNGIV 245
Score = 159 (61.0 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 40/109 (36%), Positives = 55/109 (50%)
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
L+PE GR PI V L AL E+ V++L E NAL QY + NV + FT D + +A
Sbjct: 310 LLPELQGRLPIRVELRALTEEDFVRILTETDNALTLQYTALMGTENVAVTFTPDGIAALA 369
Query: 417 KKAM-----AKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVD 460
A +N GAR L ++E + E F P+ +V+A VD
Sbjct: 370 HIAAEVNQSVENIGARRLYTVMERVFEELSFTAPDRSGEAVTVDAGFVD 418
Score = 137 (53.3 bits), Expect = 4.9e-21, Sum P(3) = 4.9e-21
Identities = 41/99 (41%), Positives = 54/99 (54%)
Query: 205 VGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKM 264
+GE+A+ +L L Q GIV++DE+DK+ A S G DVS EGVQ+ LL +
Sbjct: 218 IGEEADKLLDDELVNKTALEAVEQNGIVFLDEIDKVC-ARSDARGADVSREGVQRDLLPL 276
Query: 265 LEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
+EGT V+ K+ G PI T ILFI GAF
Sbjct: 277 IEGTTVST--------KY--G---PIKTDHILFIASGAF 302
Score = 66 (28.3 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKS 95
DL TP+EI LD F+IGQ+ AK++
Sbjct: 3 DL-TPREIVSELDRFIIGQKDAKRA 26
>TIGR_CMR|CJE_0764 [details] [associations]
symbol:CJE_0764 "heat shock protein HslVU, ATPase subunit
HslU" species:195099 "Campylobacter jejuni RM1221" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006200 GO:GO:0016887 EMBL:CP000025
GenomeReviews:CP000025_GR InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 RefSeq:YP_178773.1 ProteinModelPortal:Q5HVB2
SMR:Q5HVB2 STRING:Q5HVB2 GeneID:3230716 KEGG:cjr:CJE0764
PATRIC:20043261 eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667
OMA:KYGMIKT ProtClustDB:PRK05201 BioCyc:CJEJ195099:GJC0-780-MONOMER
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 Uniprot:Q5HVB2
Length = 439
Score = 176 (67.0 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 42/116 (36%), Positives = 66/116 (56%)
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPE GRFP+ V L +L++ L ++L PKN+L +QY ++ N++L F D+A++ IA
Sbjct: 314 LIPELQGRFPLRVELDSLDDKALYEILTRPKNSLLKQYSQLLKTENLELEFNDEAIKEIA 373
Query: 417 KKAMAKNT-----GARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSV 467
K A N GAR L ++E +L + FE E V+ +V+ E +G +
Sbjct: 374 KIASRANEEMQDIGARRLHTVIEKLLEDLSFEADEYAGKKFVVDKKMVE-EKLGDI 428
Score = 129 (50.5 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 32/87 (36%), Positives = 53/87 (60%)
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
D+IV N+L++G TG GKT +A+ LA+++ PF +A+ T+ G+VG D ES++
Sbjct: 45 DDIVP---KNILMIGSTGVGKTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMVRD 101
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIVK 242
L AA V+ QR D++D+ ++
Sbjct: 102 LANAALNLVKNEQRE-KNKDKIDEFIE 127
Score = 118 (46.6 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 54/177 (30%), Positives = 82/177 (46%)
Query: 137 YVDSILGSGVKSGNCNVENDEIVELEKS-NVLLMGPTGSGKTLLAKTLARIVNV------ 189
Y +S+ K N N++ + +E+E S N+ P + + + +++ V
Sbjct: 150 YKNSLEKMRTKLRNGNLD-ESTIEIEISQNMFDTNPNLPPEMGAMQDIVKVIGVGSKKVK 208
Query: 190 -PFTITDA-TAL-TQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESR 246
I DA AL +AG D ES+ + L A+ GI++IDE+DKI +
Sbjct: 209 KEMKIKDAKNALKNEAGEKILDQESIKSEALKRAE------NEGIIFIDEIDKIAVSSGN 262
Query: 247 NNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
+N +D S EGVQ+ LL ++EG+ V I G K T ILFI GAF
Sbjct: 263 SNRQDPSKEGVQRDLLPIVEGSNVQTKI---GTLK----------TDHILFIAAGAF 306
Score = 78 (32.5 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 15/21 (71%), Positives = 19/21 (90%)
Query: 74 TPKEICKGLDEFVIGQERAKK 94
TPKEI K LD++VIGQ++AKK
Sbjct: 4 TPKEIVKFLDDYVIGQKKAKK 24
Score = 47 (21.6 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 21/103 (20%), Positives = 48/103 (46%)
Query: 306 LEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESV-DSGDLVAYGLIPEFIGR 364
L K IS+ +Q+ +R +R G L ++ + + +++ D+ L PE +G
Sbjct: 138 LPKGISDEKQEEYKNSLEKMRTKLRNGNLDESTIEIEISQNMFDTNP----NLPPE-MGA 192
Query: 365 FPILVSLSALNEDQLVQVLM--EPKNALGRQY-KKMFSMNNVK 404
+V + + ++ + + + KNAL + +K+ ++K
Sbjct: 193 MQDIVKVIGVGSKKVKKEMKIKDAKNALKNEAGEKILDQESIK 235
Score = 42 (19.8 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 223 DVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKML 265
DVE+ R + + +VK E R +D E ++ +L+ L
Sbjct: 94 DVESMVRDLA--NAALNLVKNEQREKNKDKIDEFIENKILEKL 134
>UNIPROTKB|Q9KNQ7 [details] [associations]
symbol:hslU "ATP-dependent protease ATPase subunit HslU"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006200 GO:GO:0006508 GO:GO:0016887
GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 PIR:E82046 RefSeq:NP_232302.1
ProteinModelPortal:Q9KNQ7 SMR:Q9KNQ7 DNASU:2615502 GeneID:2615502
KEGG:vch:VC2674 PATRIC:20084366 Uniprot:Q9KNQ7
Length = 443
Score = 159 (61.0 bits), Expect = 4.0e-22, Sum P(3) = 4.0e-22
Identities = 41/116 (35%), Positives = 59/116 (50%)
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPE GR PI V L AL+ + ++L EPK +L QY + V + FT+D ++ IA
Sbjct: 318 LIPELQGRLPIRVELEALSSNDFKRILTEPKASLTEQYVALMKTEQVDVQFTEDGIKQIA 377
Query: 417 KKAM-----AKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSV 467
A +N GAR L +LE ++ E F+ E K G + V K +G +
Sbjct: 378 DAAWQVNETTENIGARRLHTVLERLMDEISFDATE-KAGQAFVIDAAYVKARLGEL 432
Score = 156 (60.0 bits), Expect = 4.0e-22, Sum P(3) = 4.0e-22
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 159 VELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLA 218
VE+ N+L++GPTG GKT +A+ LA++ NVPF +AT T+ GYVG++ ES++ L
Sbjct: 46 VEVTPKNILMIGPTGVGKTEIARRLAKLANVPFIKVEATKFTEVGYVGKEVESIIRDLTD 105
Query: 219 AA 220
A
Sbjct: 106 VA 107
Score = 120 (47.3 bits), Expect = 2.0e-18, Sum P(3) = 2.0e-18
Identities = 56/184 (30%), Positives = 83/184 (45%)
Query: 128 QKELVSDHLYVDSILGSGVKSGNCNVENDEI-VELEKSNVLLMGPTGSGKTL-----LAK 181
Q E ++ + ++ G N + EI V + + V +M P G + L +
Sbjct: 145 QAEQKEENSSTRQVFRKKLREGQLNDKEIEINVAVPQMGVEIMAPPGMEEMTNQLQGLFQ 204
Query: 182 TLARIVNVPFTITDATALTQAGYVGEDAESVLYK--LLAAADFDVEAAQRGIVYIDEVDK 239
LA + AL V E+A ++ + L A ++VE GIV+IDE+DK
Sbjct: 205 NLAGDTKKKRKMKIKDALK--ALVEEEAAKLVNQEELKEQAIYNVE--NNGIVFIDEIDK 260
Query: 240 IVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
I K +G DVS EGVQ+ LL ++EG+ V+ KH + T ILFI
Sbjct: 261 ICK-RGEVSGPDVSREGVQRDLLPLIEGSTVST--------KHGM-----VRTDHILFIA 306
Query: 300 GGAF 303
GAF
Sbjct: 307 SGAF 310
Score = 58 (25.5 bits), Expect = 4.0e-22, Sum P(3) = 4.0e-22
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 74 TPKEICKGLDEFVIGQERAKKS 95
TP+EI L+ +IGQ++AK++
Sbjct: 5 TPREIVSELNRHIIGQDKAKRA 26
>TIGR_CMR|VC_2674 [details] [associations]
symbol:VC_2674 "protease HslVU, ATPase subunit HslU"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006200 GO:GO:0006508 GO:GO:0016887 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 PIR:E82046
RefSeq:NP_232302.1 ProteinModelPortal:Q9KNQ7 SMR:Q9KNQ7
DNASU:2615502 GeneID:2615502 KEGG:vch:VC2674 PATRIC:20084366
Uniprot:Q9KNQ7
Length = 443
Score = 159 (61.0 bits), Expect = 4.0e-22, Sum P(3) = 4.0e-22
Identities = 41/116 (35%), Positives = 59/116 (50%)
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPE GR PI V L AL+ + ++L EPK +L QY + V + FT+D ++ IA
Sbjct: 318 LIPELQGRLPIRVELEALSSNDFKRILTEPKASLTEQYVALMKTEQVDVQFTEDGIKQIA 377
Query: 417 KKAM-----AKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSV 467
A +N GAR L +LE ++ E F+ E K G + V K +G +
Sbjct: 378 DAAWQVNETTENIGARRLHTVLERLMDEISFDATE-KAGQAFVIDAAYVKARLGEL 432
Score = 156 (60.0 bits), Expect = 4.0e-22, Sum P(3) = 4.0e-22
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 159 VELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLA 218
VE+ N+L++GPTG GKT +A+ LA++ NVPF +AT T+ GYVG++ ES++ L
Sbjct: 46 VEVTPKNILMIGPTGVGKTEIARRLAKLANVPFIKVEATKFTEVGYVGKEVESIIRDLTD 105
Query: 219 AA 220
A
Sbjct: 106 VA 107
Score = 120 (47.3 bits), Expect = 2.0e-18, Sum P(3) = 2.0e-18
Identities = 56/184 (30%), Positives = 83/184 (45%)
Query: 128 QKELVSDHLYVDSILGSGVKSGNCNVENDEI-VELEKSNVLLMGPTGSGKTL-----LAK 181
Q E ++ + ++ G N + EI V + + V +M P G + L +
Sbjct: 145 QAEQKEENSSTRQVFRKKLREGQLNDKEIEINVAVPQMGVEIMAPPGMEEMTNQLQGLFQ 204
Query: 182 TLARIVNVPFTITDATALTQAGYVGEDAESVLYK--LLAAADFDVEAAQRGIVYIDEVDK 239
LA + AL V E+A ++ + L A ++VE GIV+IDE+DK
Sbjct: 205 NLAGDTKKKRKMKIKDALK--ALVEEEAAKLVNQEELKEQAIYNVE--NNGIVFIDEIDK 260
Query: 240 IVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFIC 299
I K +G DVS EGVQ+ LL ++EG+ V+ KH + T ILFI
Sbjct: 261 ICK-RGEVSGPDVSREGVQRDLLPLIEGSTVST--------KHGM-----VRTDHILFIA 306
Query: 300 GGAF 303
GAF
Sbjct: 307 SGAF 310
Score = 58 (25.5 bits), Expect = 4.0e-22, Sum P(3) = 4.0e-22
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 74 TPKEICKGLDEFVIGQERAKKS 95
TP+EI L+ +IGQ++AK++
Sbjct: 5 TPREIVSELNRHIIGQDKAKRA 26
>UNIPROTKB|P43773 [details] [associations]
symbol:hslU "ATP-dependent protease ATPase subunit HslU"
species:71421 "Haemophilus influenzae Rd KW20" [GO:0005515 "protein
binding" evidence=IPI] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
GO:GO:0016887 EMBL:L42023 GenomeReviews:L42023_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:NP_438655.1 PDB:1G3I PDB:1G41 PDB:1IM2 PDB:1KYI PDB:1OFH
PDB:1OFI PDBsum:1G3I PDBsum:1G41 PDBsum:1IM2 PDBsum:1KYI
PDBsum:1OFH PDBsum:1OFI ProteinModelPortal:P43773 SMR:P43773
DIP:DIP-6175N IntAct:P43773 GeneID:950614 KEGG:hin:HI0497
PATRIC:20189545 EvolutionaryTrace:P43773 Uniprot:P43773
Length = 444
Score = 161 (61.7 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 40/116 (34%), Positives = 63/116 (54%)
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPE GR PI V L+AL+ ++L EP +L QYK + + V + FT DA++ IA
Sbjct: 319 LIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIA 378
Query: 417 KKAM-----AKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKEAVGSV 467
+ A +N GAR L ++E ++ + F + T +++A V +A+G V
Sbjct: 379 EAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYV-ADALGEV 433
Score = 149 (57.5 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 36/103 (34%), Positives = 60/103 (58%)
Query: 160 ELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAA 219
E+ N+L++GPTG GKT +A+ LA++ N PF +AT T+ GYVG++ +S++ L
Sbjct: 47 EVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDL--- 103
Query: 220 ADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALL 262
++A + +V E+ A++R DV+ E + ALL
Sbjct: 104 ----TDSAMK-LVRQQEI-----AKNRARAEDVAEERILDALL 136
Score = 122 (48.0 bits), Expect = 7.3e-19, Sum P(3) = 7.3e-19
Identities = 34/76 (44%), Positives = 44/76 (57%)
Query: 228 QRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
Q GIV+IDE+DKI K + +G DVS EGVQ+ LL ++EG+ V+ KH
Sbjct: 250 QNGIVFIDEIDKICK-KGEYSGADVSREGVQRDLLPLVEGSTVST--------KHGM--- 297
Query: 288 IPIDTKDILFICGGAF 303
+ T ILFI GAF
Sbjct: 298 --VKTDHILFIASGAF 311
Score = 58 (25.5 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 74 TPKEICKGLDEFVIGQERAKKS 95
TP+EI LD+ +IGQ AK++
Sbjct: 5 TPREIVSELDQHIIGQADAKRA 26
>DICTYBASE|DDB_G0288593 [details] [associations]
symbol:DDB_G0288593 "ATP-dependent hsl protease
ATP-binding subunit hslU" species:44689 "Dictyostelium discoideum"
[GO:0070011 "peptidase activity, acting on L-amino acid peptides"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0009376 "HslUV protease complex" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
dictyBase:DDB_G0288593 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
EMBL:AAFI02000117 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 KO:K03667 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:XP_636662.1
ProteinModelPortal:Q54IQ2 SMR:Q54IQ2 STRING:Q54IQ2
EnsemblProtists:DDB0188012 GeneID:8626708 KEGG:ddi:DDB_G0288593
InParanoid:Q54IQ2 OMA:IAFEANA Uniprot:Q54IQ2
Length = 694
Score = 157 (60.3 bits), Expect = 4.7e-21, Sum P(3) = 4.7e-21
Identities = 38/113 (33%), Positives = 66/113 (58%)
Query: 165 NVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDV 224
N+L++GPTG GKT LA+ LA+I+N PF +AT T+ G+ G D ++++ L+ A+ ++
Sbjct: 316 NILMIGPTGVGKTELARRLAKIINAPFVKVEATKYTEVGFHGPDVDTIIRDLIEASISNI 375
Query: 225 EA--AQRGIVYID-EVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
+ A I+ +V+K V + D+S +++ L K EG + +V I
Sbjct: 376 KTKIANSHKASIEADVEKNVISSLIGLQNDLSAITIEELLKKYREGQLDSVEI 428
Score = 148 (57.2 bits), Expect = 4.7e-21, Sum P(3) = 4.7e-21
Identities = 35/91 (38%), Positives = 49/91 (53%)
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LI E GR PI V L L + ++L EPKN +Q K + +++L FTDDAL +A
Sbjct: 569 LISELQGRLPIRVELKPLEQKDFYKILTEPKNNQIQQQKALLKTEDIQLEFTDDALLEVA 628
Query: 417 K-----KAMAKNTGARGLRALLENILTEAMF 442
K A +N GAR L ++E I+ + F
Sbjct: 629 KIAFEANAQVQNLGARRLHGIIERIVEDISF 659
Score = 134 (52.2 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 46/128 (35%), Positives = 67/128 (52%)
Query: 179 LAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLA-AADFDVEAA-QRGIVYIDE 236
+AK L+ I P I T + +A + E LY + +++A Q GIV++DE
Sbjct: 448 IAKLLSAIDKQPSKIKKVT-IAEAKEIFEKQYRDLYTVSQDVTKLAIQSAEQNGIVFLDE 506
Query: 237 VDKIVKA-ESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDI 295
+DKI + ES NG D S +GVQ+ LL ++EG +V+ K+ + IDT I
Sbjct: 507 IDKICTSRESIKNGGDASTDGVQRDLLPIVEGCMVST--------KYGQ-----IDTSRI 553
Query: 296 LFICGGAF 303
LFI GAF
Sbjct: 554 LFIASGAF 561
Score = 67 (28.6 bits), Expect = 4.7e-21, Sum P(3) = 4.7e-21
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 75 PKEICKGLDEFVIGQERAKKS 95
P++I GLDE+VIGQ AK++
Sbjct: 270 PRDIVSGLDEYVIGQSDAKRA 290
>TIGR_CMR|CPS_4370 [details] [associations]
symbol:CPS_4370 "heat shock protein HslVU, ATPase subunit
HslU" species:167879 "Colwellia psychrerythraea 34H" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
GO:GO:0006200 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:P0A6H5
eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT
ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:YP_271019.1
ProteinModelPortal:Q47W03 SMR:Q47W03 STRING:Q47W03 GeneID:3518888
KEGG:cps:CPS_4370 PATRIC:21471585
BioCyc:CPSY167879:GI48-4379-MONOMER Uniprot:Q47W03
Length = 443
Score = 161 (61.7 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 39/110 (35%), Positives = 56/110 (50%)
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
LIPE GR PI V L AL D V++L EP +L QY + + V + FTDD ++ IA
Sbjct: 318 LIPELQGRLPIRVELQALTADDFVRILTEPFASLTEQYIALLATEGVSVTFTDDGIKAIA 377
Query: 417 KKAM-----AKNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDK 461
A +N GAR L ++E ++ + F + T S++ V K
Sbjct: 378 DSAWQVNETTENIGARRLHTMMERLVEDLSFNADQRSGETISIDQAYVTK 427
Score = 140 (54.3 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 160 ELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAA 219
E+ N+L++GPTG GKT +A+ LA++ + PF +AT T+ GYVG++ E+++ L
Sbjct: 47 EVTPKNILMIGPTGVGKTEIARRLAKLAHAPFIKVEATKFTEVGYVGKEVETIIRDL--- 103
Query: 220 ADFDVEAAQRGIVYIDEVDKIVK--AESR 246
AD ++ + +D V + + AE R
Sbjct: 104 ADMAIKMVKES--EMDRVKHLAEEAAEER 130
Score = 129 (50.5 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
Identities = 35/76 (46%), Positives = 43/76 (56%)
Query: 228 QRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDN 287
Q GIV+IDE+DKI K + G DVS EGVQ+ LL ++EG+ V+ KH
Sbjct: 248 QNGIVFIDEIDKICKRADSSGGGDVSREGVQRDLLPLVEGSTVST--------KHGM--- 296
Query: 288 IPIDTKDILFICGGAF 303
I T ILFI GAF
Sbjct: 297 --IKTDHILFIASGAF 310
Score = 55 (24.4 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 74 TPKEICKGLDEFVIGQERAKKS 95
TP+EI LD ++GQ AK++
Sbjct: 5 TPREIVHELDSHIVGQSDAKRA 26
>TIGR_CMR|ECH_0997 [details] [associations]
symbol:ECH_0997 "heat shock protein HslVU, ATPase subunit
HslU" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006200 GO:GO:0016887
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_507784.1 ProteinModelPortal:Q2GFJ9
SMR:Q2GFJ9 STRING:Q2GFJ9 GeneID:3927521 KEGG:ech:ECH_0997
PATRIC:20577368 BioCyc:ECHA205920:GJNR-1000-MONOMER Uniprot:Q2GFJ9
Length = 487
Score = 162 (62.1 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
L+PE GR PI V L L++D LV++L EP+++L +QY + N+ + FTD+ + IA
Sbjct: 362 LLPELQGRLPIRVELKPLSKDDLVRILTEPESSLLKQYCALMKTENITIDFTDEGVSTIA 421
Query: 417 KKAMA-----KNTGARGLRALLENILTEAMFEIPETKIGTSSVNAVLVDKE 462
+ A +N GAR L +LE ++ + + E T +++ V K+
Sbjct: 422 EIASTVNREVENIGARRLHTILEKLMEDISYTATENSGRTYVIDSEYVKKK 472
Score = 134 (52.2 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 160 ELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLL-A 218
E+ N+L++G TG GKT +A+ LA++ PF +AT T+ GYVG D +S++ L+
Sbjct: 98 EIIPKNILMIGHTGIGKTEIARRLAKLAKAPFIKVEATKFTEIGYVGRDVDSIIRDLVDV 157
Query: 219 AADFDVEAAQR 229
A + + E +++
Sbjct: 158 AINLEKEKSRK 168
Score = 108 (43.1 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 40/119 (33%), Positives = 62/119 (52%)
Query: 185 RIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAE 244
++ + T+ +A L + E++E ++ + D + A+ GIV++DE+DKI A
Sbjct: 255 QLKTIKVTVKEARELL----INEESEKLMDEDKIIKDALLLASNDGIVFLDEIDKIA-AR 309
Query: 245 SRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAF 303
+ G +V+ EGVQ+ LL +LEGT V K+ G I T ILFI GAF
Sbjct: 310 TEIRG-EVNREGVQRDLLPLLEGTSVTT--------KY--GT---ITTDHILFIASGAF 354
Score = 60 (26.2 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 74 TPKEICKGLDEFVIGQERAKKS 95
TP++I + LD F+IGQ AK++
Sbjct: 56 TPQQITQELDRFIIGQADAKRA 77
>TIGR_CMR|APH_1074 [details] [associations]
symbol:APH_1074 "ATP-dependent Hsl protease, ATP-binding
subunit HslU" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 GO:GO:0006200 GO:GO:0006508
GO:GO:0016887 EMBL:CP000235 GenomeReviews:CP000235_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_505627.1 ProteinModelPortal:Q2GJ24
SMR:Q2GJ24 STRING:Q2GJ24 GeneID:3931122 KEGG:aph:APH_1074
PATRIC:20950902 BioCyc:APHA212042:GHPM-1080-MONOMER Uniprot:Q2GJ24
Length = 437
Score = 147 (56.8 bits), Expect = 7.7e-20, Sum P(3) = 7.7e-20
Identities = 33/95 (34%), Positives = 52/95 (54%)
Query: 357 LIPEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIA 416
L+PE GR PI V L L+ D LV++L EP+ L +QY+ + V + FT+D + IA
Sbjct: 312 LLPELQGRLPIRVELQPLSRDDLVRILTEPEANLLKQYRALLETEGVTVEFTEDGIFAIA 371
Query: 417 KKAMA-----KNTGARGLRALLENILTEAMFEIPE 446
+ A +N GAR L ++E ++ + + E
Sbjct: 372 EIASTVNREVENIGARRLHTIMEKLMEDISYNASE 406
Score = 139 (54.0 bits), Expect = 7.7e-20, Sum P(3) = 7.7e-20
Identities = 33/97 (34%), Positives = 54/97 (55%)
Query: 156 DEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYK 215
DEI+ N+L++G TG GKT +A+ LA++ PF +AT T+ GYVG D +S++
Sbjct: 46 DEIIP---KNILMIGHTGVGKTEIARRLAKLAQAPFIKVEATKFTEIGYVGRDVDSIMRD 102
Query: 216 LLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDV 252
L+ A V+ R K+V+ ++R + D+
Sbjct: 103 LVDRAVLLVKEKYR---------KVVRKQARKSAEDI 130
Score = 102 (41.0 bits), Expect = 4.7e-16, Sum P(3) = 4.7e-16
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRG 285
A+ GIV++DE+DKI A + G +V+ EGVQ+ LL +LEGT V+ K+ G
Sbjct: 242 ASNEGIVFLDEIDKIA-ARTEVRG-EVNREGVQRDLLPLLEGTSVST--------KY--G 289
Query: 286 DNIPIDTKDILFICGGAF 303
+ T +LFI GAF
Sbjct: 290 T---VTTDHVLFIASGAF 304
Score = 66 (28.3 bits), Expect = 7.7e-20, Sum P(3) = 7.7e-20
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 71 DLPTPKEICKGLDEFVIGQERAKKS 95
DL +PK+I K LD F++GQ AK++
Sbjct: 3 DL-SPKQITKELDRFIVGQTEAKRA 26
>UNIPROTKB|I3LI39 [details] [associations]
symbol:I3LI39 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00570000078874
Ensembl:ENSSSCT00000029727 OMA:QARECAP Uniprot:I3LI39
Length = 160
Score = 130 (50.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/88 (40%), Positives = 48/88 (54%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 50 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGE-GEKLVRALFAVA----R 103
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD +++ E R D S
Sbjct: 104 ELQPSIIFIDEVDSLLR-ERREGEHDAS 130
>TIGR_CMR|CHY_2164 [details] [associations]
symbol:CHY_2164 "ATPase, AAA family" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0019538 "protein metabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0464 GO:GO:0017111 RefSeq:YP_360978.1
ProteinModelPortal:Q3AA56 STRING:Q3AA56 GeneID:3726841
KEGG:chy:CHY_2164 PATRIC:21277395
BioCyc:CHYD246194:GJCN-2163-MONOMER Uniprot:Q3AA56
Length = 411
Score = 146 (56.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 33/91 (36%), Positives = 55/91 (60%)
Query: 165 NVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDV 224
N++L GP G+GKT A+T+A+ +PF + +A+A+ +G + AE L +L A A
Sbjct: 195 NIILYGPPGNGKTNFARTVAQAYGLPFFVVNASAIISSGQLVGAAEKTLLELFANA---- 250
Query: 225 EAAQRGIVYIDEVDKIVK---AESRNNGRDV 252
+A + I++ DE+D I K AE+ N+ D+
Sbjct: 251 KALRPAIIFFDEIDAIAKKRRAETLNSASDI 281
>FB|FBgn0031519 [details] [associations]
symbol:CG3326 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0036078 "minus-end specific microtubule depolymerization"
evidence=IMP] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IMP] [GO:0005694 "chromosome" evidence=IDA] [GO:0051013
"microtubule severing" evidence=IMP] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IMP] [GO:0000091 "mitotic anaphase
A" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005813 GO:GO:0005694 EMBL:AE014134
GO:GO:0000287 GO:GO:0000070 eggNOG:COG0464 GO:GO:0008568
GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 HSSP:P43773
GeneTree:ENSGT00570000078874 EMBL:AY058790 RefSeq:NP_608763.2
ProteinModelPortal:Q9VQN8 SMR:Q9VQN8 PaxDb:Q9VQN8 PRIDE:Q9VQN8
EnsemblMetazoa:FBtr0077603 EnsemblMetazoa:FBtr0331372 GeneID:33544
KEGG:dme:Dmel_CG3326 UCSC:CG3326-RA FlyBase:FBgn0031519
InParanoid:Q9VQN8 OMA:AWNEIYG OrthoDB:EOG41RN95 PhylomeDB:Q9VQN8
GenomeRNAi:33544 NextBio:784133 Bgee:Q9VQN8 GO:GO:0036078
GO:GO:0000091 Uniprot:Q9VQN8
Length = 523
Score = 133 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 40/109 (36%), Positives = 57/109 (52%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
VLL GP G+GKTL+AK++A F + ++LT +VG DAE ++ L A A
Sbjct: 286 VLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSK-WVG-DAEKLVKTLFAVA----A 339
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPI 274
A Q I++IDEVD ++ S N S ++ L L+G N I
Sbjct: 340 AHQPAIIFIDEVDSLLSKRSANENE--STLRLKNEFLIHLDGAASNEEI 386
>UNIPROTKB|F1S3Z2 [details] [associations]
symbol:SPAST "Spastin" species:9823 "Sus scrofa"
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051013
"microtubule severing" evidence=IEA] [GO:0048487 "beta-tubulin
binding" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0030496
"midbody" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0007109 "cytokinesis, completion of separation"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0015630
GO:GO:0005768 GO:GO:0051260 Pfam:PF04212 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 OMA:HKSTPKT EMBL:FP583344
EMBL:CU694619 Ensembl:ENSSSCT00000009321 Uniprot:F1S3Z2
Length = 479
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 36/88 (40%), Positives = 48/88 (54%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 292 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGE-GEKLVRALFAVA----R 345
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD +++ E R D S
Sbjct: 346 ELQPSIIFIDEVDSLLR-ERREGEHDAS 372
>UNIPROTKB|Q719N1 [details] [associations]
symbol:SPAST "Spastin" species:9823 "Sus scrofa"
[GO:0015630 "microtubule cytoskeleton" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0005783 "endoplasmic
reticulum" evidence=ISS] [GO:0007109 "cytokinesis, completion of
separation" evidence=ISS] [GO:0001578 "microtubule bundle
formation" evidence=ISS] [GO:0051260 "protein homooligomerization"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0034214 "protein hexamerization" evidence=ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=ISS] [GO:0048487
"beta-tubulin binding" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0016021 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0005819 GO:GO:0005768
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0007109 GO:GO:0048487
GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0043014 SMART:SM00745 GO:GO:0034214
HOGENOM:HOG000225146 KO:K13254 HAMAP:MF_03021 CTD:6683
HOVERGEN:HBG108502 OrthoDB:EOG4NZTTF EMBL:AF540879
RefSeq:NP_998914.1 UniGene:Ssc.19685 STRING:Q719N1 GeneID:396584
KEGG:ssc:396584 Uniprot:Q719N1
Length = 613
Score = 130 (50.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 36/88 (40%), Positives = 48/88 (54%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 375 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGE-GEKLVRALFAVA----R 428
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD +++ E R D S
Sbjct: 429 ELQPSIIFIDEVDSLLR-ERREGEHDAS 455
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 131 (51.2 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 47/138 (34%), Positives = 68/138 (49%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
VLL+GP GSGKT+LA+ +A NVP+ T + YVG+ A+ + +L A A
Sbjct: 185 VLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEI-YVGQGAKRIR-QLFAHA----R 238
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRG 285
+ IV+IDE+D I R++G V+G G Q+ + L +V + N G
Sbjct: 239 SVAPSIVFIDEIDAI--GGKRSSG-SVNGAG-QREHDQTLNQLLVEMDGFSNTVHIMVIG 294
Query: 286 DNIPIDTKDILFICGGAF 303
IDT D + G F
Sbjct: 295 ATNRIDTLDSALLRPGRF 312
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 131 (51.2 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 47/138 (34%), Positives = 68/138 (49%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
VLL+GP GSGKT+LA+ +A NVP+ T + YVG+ A+ + +L A A
Sbjct: 185 VLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEI-YVGQGAKRIR-QLFAHA----R 238
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRG 285
+ IV+IDE+D I R++G V+G G Q+ + L +V + N G
Sbjct: 239 SVAPSIVFIDEIDAI--GGKRSSG-SVNGAG-QREHDQTLNQLLVEMDGFSNTVHIMVIG 294
Query: 286 DNIPIDTKDILFICGGAF 303
IDT D + G F
Sbjct: 295 ATNRIDTLDSALLRPGRF 312
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 115 (45.5 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 34/104 (32%), Positives = 51/104 (49%)
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
+ V+L GP G+GKTLLA+ +A F + L Q Y+GE + V + A
Sbjct: 177 QPKGVILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQK-YIGEGSRMVRELFVMAR- 234
Query: 222 FDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKML 265
E A I+++DE+D I SR G VQ+ +L++L
Sbjct: 235 ---EHAP-SIIFMDEIDSI--GSSRVEGSSGGDSEVQRTMLELL 272
Score = 54 (24.1 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 397 MFSMNNVKLHFTDDALRLIAKKAMAKNT-GARGLRALLE 434
M+++ ++H T + L K M+KN GA L+ L +
Sbjct: 363 MYALRERRIHVTQEDFELAVAKVMSKNDDGAVSLQKLFK 401
>RGD|1308494 [details] [associations]
symbol:Spast "spastin" species:10116 "Rattus norvegicus"
[GO:0001578 "microtubule bundle formation" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
"endosome" evidence=ISO;ISS] [GO:0005783 "endoplasmic reticulum"
evidence=ISO;ISS] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA;ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO;ISS] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007109 "cytokinesis, completion of
separation" evidence=ISO;ISS] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=ISO;ISS] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA;ISO;ISS] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO;ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030496 "midbody" evidence=ISO;ISS] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA;ISO] [GO:0034214 "protein hexamerization"
evidence=ISO;ISS] [GO:0043014 "alpha-tubulin binding"
evidence=ISO;ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048487 "beta-tubulin binding" evidence=ISO;ISS]
[GO:0051013 "microtubule severing" evidence=ISO;ISS] [GO:0051260
"protein homooligomerization" evidence=ISO;ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 RGD:1308494 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0005768 GO:GO:0051260 GO:GO:0005815
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0006888
GO:GO:0007109 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0043014
SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:BC166846
IPI:IPI00365573 RefSeq:NP_001102172.2 UniGene:Rn.41645
ProteinModelPortal:B2RYN7 SMR:B2RYN7 STRING:B2RYN7 PRIDE:B2RYN7
GeneID:362700 KEGG:rno:362700 UCSC:RGD:1308494 NextBio:680920
ArrayExpress:B2RYN7 Genevestigator:B2RYN7 Uniprot:B2RYN7
Length = 581
Score = 128 (50.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 343 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGE-GEKLVRALFAVA----R 396
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD ++ E R D S
Sbjct: 397 ELQPSIIFIDEVDSLL-CERREGEHDAS 423
>UNIPROTKB|F1M9D2 [details] [associations]
symbol:Spast "Spastin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 RGD:1308494 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
SMART:SM00745 GeneTree:ENSGT00570000078874 IPI:IPI00365573
Ensembl:ENSRNOT00000039375 ArrayExpress:F1M9D2 Uniprot:F1M9D2
Length = 581
Score = 128 (50.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 343 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGE-GEKLVRALFAVA----R 396
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD ++ E R D S
Sbjct: 397 ELQPSIIFIDEVDSLL-CERREGEHDAS 423
>UNIPROTKB|E1C6S3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
GeneTree:ENSGT00570000078874 IPI:IPI00599182 EMBL:AADN02011792
EMBL:AADN02011793 Ensembl:ENSGALT00000017279 ArrayExpress:E1C6S3
Uniprot:E1C6S3
Length = 592
Score = 128 (50.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 354 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGE-GEKLVRALFAVA----R 407
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD ++ E R D S
Sbjct: 408 ELQPSIIFIDEVDSLL-CERREGEHDAS 434
>UNIPROTKB|F1NCJ3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001578 "microtubule
bundle formation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0007109 "cytokinesis, completion of separation" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0030496
"midbody" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0005768
GO:GO:0051260 Pfam:PF04212 GO:GO:0006888 GO:GO:0030496
GO:GO:0007109 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0034214 GeneTree:ENSGT00570000078874
OMA:HKSTPKT EMBL:AADN02011792 EMBL:AADN02011793 IPI:IPI00821045
Ensembl:ENSGALT00000037930 ArrayExpress:F1NCJ3 Uniprot:F1NCJ3
Length = 600
Score = 128 (50.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 362 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGE-GEKLVRALFAVA----R 415
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD ++ E R D S
Sbjct: 416 ELQPSIIFIDEVDSLL-CERREGEHDAS 442
>UNIPROTKB|Q5ZK92 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0015630 "microtubule cytoskeleton" evidence=ISS] [GO:0043014
"alpha-tubulin binding" evidence=ISS] [GO:0048487 "beta-tubulin
binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0001578
"microtubule bundle formation" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 HSSP:O75351
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
OrthoDB:EOG4NZTTF EMBL:EU849599 EMBL:EU849600 EMBL:AJ720192
IPI:IPI00599182 IPI:IPI00923811 RefSeq:NP_001026232.1
UniGene:Gga.21964 ProteinModelPortal:Q5ZK92 SMR:Q5ZK92
STRING:Q5ZK92 GeneID:421481 KEGG:gga:421481 InParanoid:Q5ZK92
NextBio:20824244 Uniprot:Q5ZK92
Length = 613
Score = 128 (50.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 375 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGE-GEKLVRALFAVA----R 428
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD ++ E R D S
Sbjct: 429 ELQPSIIFIDEVDSLL-CERREGEHDAS 455
>UNIPROTKB|D4A0I3 [details] [associations]
symbol:Spast "Spastin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
RGD:1308494 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005768 GO:GO:0051260 Pfam:PF04212 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 SMART:SM00745 GO:GO:0034214
OrthoDB:EOG4NZTTF IPI:IPI00947816 Ensembl:ENSRNOT00000068220
ArrayExpress:D4A0I3 Uniprot:D4A0I3
Length = 613
Score = 128 (50.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 375 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGE-GEKLVRALFAVA----R 428
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD ++ E R D S
Sbjct: 429 ELQPSIIFIDEVDSLL-CERREGEHDAS 455
>UNIPROTKB|A2VDN5 [details] [associations]
symbol:SPAST "Spastin" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0007109
"cytokinesis, completion of separation" evidence=ISS] [GO:0001578
"microtubule bundle formation" evidence=ISS] [GO:0051260 "protein
homooligomerization" evidence=ISS] [GO:0051013 "microtubule
severing" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
[GO:0043014 "alpha-tubulin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005768 "endosome" evidence=ISS]
[GO:0030496 "midbody" evidence=ISS] [GO:0015630 "microtubule
cytoskeleton" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0016021 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0005819 GO:GO:0005768
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0030496 GO:GO:0007109
GO:GO:0048487 GO:GO:0008017 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
GO:GO:0034214 GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146
KO:K13254 HAMAP:MF_03021 EMBL:BC133327 IPI:IPI00840116
RefSeq:NP_001075060.1 UniGene:Bt.46123 ProteinModelPortal:A2VDN5
SMR:A2VDN5 STRING:A2VDN5 Ensembl:ENSBTAT00000046919 GeneID:521442
KEGG:bta:521442 CTD:6683 HOVERGEN:HBG108502 InParanoid:A2VDN5
OMA:HKSTPKT OrthoDB:EOG4NZTTF NextBio:20873307 ArrayExpress:A2VDN5
Uniprot:A2VDN5
Length = 614
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.4e-05
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 376 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGE-GEKLVRALFAVA----R 429
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD ++ E R D S
Sbjct: 430 ELQPSIIFIDEVDSLL-CERREGEHDAS 456
>MGI|MGI:1858896 [details] [associations]
symbol:Spast "spastin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768 "endosome"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007109
"cytokinesis, completion of separation" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008017 "microtubule
binding" evidence=ISO] [GO:0008568 "microtubule-severing ATPase
activity" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=ISO] [GO:0034214 "protein hexamerization"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=ISO] [GO:0051013
"microtubule severing" evidence=ISO;IGI;IMP;IDA] [GO:0051260
"protein homooligomerization" evidence=ISO] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1858896 GO:GO:0005783 GO:GO:0016021 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0005768 GO:GO:0051260 GO:GO:0005815
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0048487 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
OrthoDB:EOG4NZTTF EMBL:AK129282 EMBL:BC046286 EMBL:AK007793
EMBL:AJ246002 IPI:IPI00420580 RefSeq:NP_001156342.1
RefSeq:NP_058658.2 UniGene:Mm.19804 ProteinModelPortal:Q9QYY8
SMR:Q9QYY8 STRING:Q9QYY8 PhosphoSite:Q9QYY8 PaxDb:Q9QYY8
PRIDE:Q9QYY8 Ensembl:ENSMUST00000024869 GeneID:50850 KEGG:mmu:50850
UCSC:uc008dnz.2 InParanoid:Q9QYY8 NextBio:307827 Bgee:Q9QYY8
CleanEx:MM_SPAST Genevestigator:Q9QYY8
GermOnline:ENSMUSG00000024068 Uniprot:Q9QYY8
Length = 614
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.4e-05
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 376 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGE-GEKLVRALFAVA----R 429
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD ++ E R D S
Sbjct: 430 ELQPSIIFIDEVDSLL-CERREGEHDAS 456
>UNIPROTKB|Q9UBP0 [details] [associations]
symbol:SPAST "Spastin" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IPI] [GO:0008568
"microtubule-severing ATPase activity" evidence=IDA] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0043014 "alpha-tubulin
binding" evidence=IPI] [GO:0051013 "microtubule severing"
evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0034214 "protein hexamerization" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0007109 "cytokinesis,
completion of separation" evidence=IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0001578 "microtubule
bundle formation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030496 "midbody" evidence=IDA] [GO:0031410 "cytoplasmic
vesicle" evidence=IDA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 EMBL:CH471053 GO:GO:0007399 GO:GO:0030154
GO:GO:0005819 GO:GO:0008219 GO:GO:0005768 GO:GO:0051260
GO:GO:0031410 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0007109 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
SMART:SM00745 PDB:3EAB PDBsum:3EAB GO:GO:0034214
HOGENOM:HOG000225146 KO:K13254 HAMAP:MF_03021 CTD:6683
HOVERGEN:HBG108502 OMA:HKSTPKT OrthoDB:EOG4NZTTF EMBL:AJ246001
EMBL:AJ246003 EMBL:AB029006 EMBL:BC150260 IPI:IPI00002707
IPI:IPI00219816 IPI:IPI00923524 IPI:IPI00923553 RefSeq:NP_055761.2
RefSeq:NP_955468.1 UniGene:Hs.468091 PDB:3VFD PDBsum:3VFD
ProteinModelPortal:Q9UBP0 SMR:Q9UBP0 IntAct:Q9UBP0 STRING:Q9UBP0
PhosphoSite:Q9UBP0 DMDM:12230611 PaxDb:Q9UBP0 PeptideAtlas:Q9UBP0
PRIDE:Q9UBP0 Ensembl:ENST00000315285 Ensembl:ENST00000345662
GeneID:6683 KEGG:hsa:6683 UCSC:uc002roc.3 GeneCards:GC02P032288
HGNC:HGNC:11233 HPA:HPA017311 MIM:182601 MIM:604277
neXtProt:NX_Q9UBP0 Orphanet:100985 PharmGKB:PA36063
InParanoid:Q9UBP0 PhylomeDB:Q9UBP0 ChiTaRS:SPAST
EvolutionaryTrace:Q9UBP0 GenomeRNAi:6683 NextBio:26047
ArrayExpress:Q9UBP0 Bgee:Q9UBP0 CleanEx:HS_SPAST
Genevestigator:Q9UBP0 Uniprot:Q9UBP0
Length = 616
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 378 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGE-GEKLVRALFAVA----R 431
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD ++ E R D S
Sbjct: 432 ELQPSIIFIDEVDSLL-CERREGEHDAS 458
>UNIPROTKB|F1PR99 [details] [associations]
symbol:SPAST "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0043014
"alpha-tubulin binding" evidence=IEA] [GO:0034214 "protein
hexamerization" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0007109 "cytokinesis,
completion of separation" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001578 "microtubule bundle formation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 GO:GO:0005634 GO:GO:0005768 GO:GO:0051260
Pfam:PF04212 GO:GO:0006888 GO:GO:0030496 GO:GO:0007109
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
SMART:SM00745 GO:GO:0034214 GeneTree:ENSGT00570000078874 KO:K13254
CTD:6683 OMA:HKSTPKT EMBL:AAEX03010834 RefSeq:XP_850973.1
Ensembl:ENSCAFT00000009227 GeneID:608582 KEGG:cfa:608582
Uniprot:F1PR99
Length = 624
Score = 128 (50.1 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 386 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGE-GEKLVRALFAVA----R 439
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD ++ E R D S
Sbjct: 440 ELQPSIIFIDEVDSLL-CERREGEHDAS 466
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 75/255 (29%), Positives = 116/255 (45%)
Query: 159 VELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLA 218
V++ K VL++GP G GKTL+AK +A VPF ++ + YVG A+ V +L +
Sbjct: 182 VKMPKG-VLMVGPPGVGKTLIAKAVAGEAGVPFFYQSGSSFVEI-YVGMGAKRVR-ELFS 238
Query: 219 AADFDVEAAQRGIVYIDEVDKIVKA--ESRNNGRDVSGEGVQQALLKM--LE---GTVV- 270
A + IV+IDE+D + KA E N RD + + Q L +M E G +V
Sbjct: 239 KAKMMAPS----IVFIDEIDAVGKARGEMSNVERDST---LNQLLTQMDGFEDNSGVIVI 291
Query: 271 ----NVPIPDNGPRKHPRGD-----NIPIDTKDILFICGGAFVGLEKTISERR-QDSSIG 320
+ + D + R D ++P D KD L I I+ + +S+G
Sbjct: 292 AATNKIELMDPALLRSGRFDRRIFLSLP-DFKDRLKILEIYMKDKNNNINLNKIAKASVG 350
Query: 321 F-GAPVRANMRTGGLTDALVTSSLLESVDSGDLVAYGLIPEFIGRFPILVSLSALNEDQL 379
F GA + + + +AL +S L V+ D A L +G+ IL S NE++
Sbjct: 351 FSGAGLETLVNEAAI-NALRRNSAL--VEESDFYAV-LNKVLLGKKKIL---SFNNEEKK 403
Query: 380 VQVLMEPKNALGRQY 394
+Q + AL Y
Sbjct: 404 IQATYQAAKALSAYY 418
>UNIPROTKB|F1MNE5 [details] [associations]
symbol:FIGNL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0033687 "osteoblast proliferation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0051726
GO:GO:0017111 GO:GO:0001649 InterPro:IPR015415 Pfam:PF09336
GeneTree:ENSGT00570000078874 OMA:QILRIQY GO:GO:0033687
EMBL:DAAA02009676 IPI:IPI00906035 Ensembl:ENSBTAT00000001962
Uniprot:F1MNE5
Length = 683
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTL+ K +A F A++LT +VGE E ++ L A A
Sbjct: 446 ILLFGPPGTGKTLIGKCIASQAGATFFSISASSLTSK-WVGE-GEKMVRALFAVA----R 499
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVN 271
Q +++IDE+D ++ R +G S ++ L L+G +
Sbjct: 500 CQQPAVIFIDEIDSLLS--QRGDGEHESSRRIKTEFLVQLDGAATS 543
>ZFIN|ZDB-GENE-040426-2331 [details] [associations]
symbol:spast "spastin" species:7955 "Danio rerio"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA;ISS] [GO:0048675 "axon extension"
evidence=IGI;IMP] [GO:0031122 "cytoplasmic microtubule
organization" evidence=IMP] [GO:0015630 "microtubule cytoskeleton"
evidence=ISS] [GO:0048487 "beta-tubulin binding" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0051013 "microtubule severing"
evidence=ISS] [GO:0051260 "protein homooligomerization"
evidence=ISS] [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IMP]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=IMP] [GO:0007416 "synapse assembly"
evidence=IMP] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2331 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0043066 GO:GO:0051301 GO:GO:0051260
GO:GO:0005815 GO:GO:0007049 Pfam:PF04212 GO:GO:0045773 HSSP:Q01853
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 GO:GO:0005874 GO:GO:0031122
GO:GO:0021955 GO:GO:0043014 GO:GO:0048676 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 GO:GO:0031117
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 OMA:HKSTPKT
OrthoDB:EOG4NZTTF EMBL:AY304504 EMBL:CU651563 EMBL:BC067715
IPI:IPI00497843 RefSeq:NP_998080.1 UniGene:Dr.30307
ProteinModelPortal:Q6NW58 SMR:Q6NW58 STRING:Q6NW58
Ensembl:ENSDART00000035150 GeneID:405851 KEGG:dre:405851
NextBio:20817813 Bgee:Q6NW58 Uniprot:Q6NW58
Length = 570
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 35/88 (39%), Positives = 46/88 (52%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A LT YVGE E ++ L A A
Sbjct: 331 LLLFGPPGNGKTMLAKAVAMESNATFFNISAATLTSK-YVGE-GEKLVRALFAVA----R 384
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDE+D ++ E R D S
Sbjct: 385 ELQPSIIFIDEIDSLL-CERREGEHDAS 411
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 122 (48.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 34/104 (32%), Positives = 55/104 (52%)
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
+ +LL GP G+GKTLLA+ +A + F + L Q Y+GE + V + A
Sbjct: 178 QPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQK-YIGEGSRMVRELFVMAR- 235
Query: 222 FDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKML 265
E A I+++DE+D I + S ++G E VQ+ +L++L
Sbjct: 236 ---EHAP-SIIFMDEIDSIGSSRSDSSGGSGDSE-VQRTMLELL 274
Score = 44 (20.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 397 MFSMNNVKLHFTDDALRLIAKKAMAK-NTGARGLRALLE 434
MF++ ++H T + L K + K ++G L+ L +
Sbjct: 365 MFALRERRVHVTQEDFELAVAKVLNKGDSGEMSLQKLFK 403
>UNIPROTKB|G4MRG5 [details] [associations]
symbol:MGG_02418 "Vesicular-fusion protein SEC18"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:CM001231 KO:K06027 RefSeq:XP_003709204.1
ProteinModelPortal:G4MRG5 EnsemblFungi:MGG_02418T0 GeneID:2681515
KEGG:mgr:MGG_02418 Uniprot:G4MRG5
Length = 835
Score = 125 (49.1 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 36/111 (32%), Positives = 58/111 (52%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNV--PFTITDATALTQAGYVGEDAESVLYKLLAAADFD 223
+LL GP G+GKTL+A+ + +++N P I L + YVG+ E++ K+ A D +
Sbjct: 345 ILLFGPPGTGKTLIARQIGKMLNAREPKIINGPEVLNK--YVGQSEENIR-KMFA--DAE 399
Query: 224 VEAAQRG------IVYIDEVDKIVKAESRNNGRDVS-GEGVQQALLKMLEG 267
E A++G I+ DE+D + K +G G+ V LL L+G
Sbjct: 400 KEYAEKGDESGLHIIIFDELDAVCKQRGSGSGGGTGVGDSVVNQLLSKLDG 450
Score = 46 (21.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 374 LNEDQLVQVLMEPKNALGRQYKKMFSM-NNVKLHFTDDALRLIAKKAMAKNTGARGLRAL 432
+N D + L E K A G K+ ++ + +HF+ A+ I + M R L L
Sbjct: 564 VNRDDFLHALGEVKPAFGMDEDKLGAVIRHGIIHFSP-AIDSILRDGMINVDAVRDLEQL 622
Query: 433 LENILTEAMFEIPE 446
N+L+ + PE
Sbjct: 623 --NLLS-VLLHGPE 633
Score = 44 (20.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 449 IGTSSVNAVLVDKEAVGSVDAPGCGAKILHGDGELERVLHETKSAHENDSEVLLKSPG 506
+ T+SV +VL + + + +A + EL RVL E+ D V++ + G
Sbjct: 732 LATTSVRSVLQQLDMMKAFNAE-IAIPAIKNLQELSRVLGESAMFESQDLNVIVNTIG 788
>UNIPROTKB|B7PXE3 [details] [associations]
symbol:spas "Spastin" species:6945 "Ixodes scapularis"
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005737
GO:GO:0005815 Pfam:PF04212 eggNOG:COG0464 GO:GO:0008017
GO:GO:0008568 GO:GO:0051013 GO:GO:0005874 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 OMA:FLNISAA EMBL:DS813618
RefSeq:XP_002400359.1 EnsemblMetazoa:ISCW020482-RA GeneID:8032764
KEGG:isc:IscW_ISCW020482 VectorBase:ISCW020482 CTD:8032764
PhylomeDB:B7PXE3 Uniprot:B7PXE3
Length = 648
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 34/88 (38%), Positives = 50/88 (56%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L A A
Sbjct: 410 LLLFGPPGNGKTMLAKAVAHESNSTFLNISAASLTSK-YVGE-GEKLVRALFAVA----R 463
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD ++ +E ++N + +
Sbjct: 464 ELQPSIIFIDEVDSLL-SERKDNEHEAT 490
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 42/119 (35%), Positives = 62/119 (52%)
Query: 153 VENDEIVEL--EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAE 210
+E+ E++ L +S +LL GP G+GKTLLAK +A ++ F L YVG+ E
Sbjct: 315 LEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINM-YVGQSEE 373
Query: 211 SVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSG--EGVQQALLKMLEG 267
+V ++ A A AA I++ DE+D + A SR D G + V LL L+G
Sbjct: 374 NVR-EVFARA----RAAAPCIIFFDELDSL--APSRGRSGDSGGVMDRVVSQLLAELDG 425
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 39/102 (38%), Positives = 55/102 (53%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
VLL GP G+GKTLLAK +A +PF + T + +VG A V K L A+
Sbjct: 352 VLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEM-FVGVAASRV--KDLFASS---R 405
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQ--QALLKML 265
+ I++IDE+D I S+ G D+ G G + Q LL++L
Sbjct: 406 SYAPSIIFIDEIDAI---GSKRGGPDIGGGGAEREQGLLQIL 444
>UNIPROTKB|Q6AZT2 [details] [associations]
symbol:spast "Spastin" species:8355 "Xenopus laevis"
[GO:0001578 "microtubule bundle formation" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
GO:GO:0048487 GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 GO:GO:0005874 GO:GO:0043014 SMART:SM00745
GO:GO:0034214 KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
EMBL:BC077358 RefSeq:NP_001086725.1 UniGene:Xl.32426
ProteinModelPortal:Q6AZT2 SMR:Q6AZT2 GeneID:446560 KEGG:xla:446560
Xenbase:XB-GENE-947846 Uniprot:Q6AZT2
Length = 600
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 35/88 (39%), Positives = 47/88 (53%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L + A
Sbjct: 362 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGE-GEKLVRALFSVA----R 415
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD ++ E R D S
Sbjct: 416 ELQPSIIFIDEVDSLL-CERREGEHDAS 442
>UNIPROTKB|Q05AS3 [details] [associations]
symbol:spast "Spastin" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0001578 "microtubule bundle formation"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0034214
"protein hexamerization" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0048487 "beta-tubulin binding"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0015630
"microtubule cytoskeleton" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0007399 GO:GO:0030154
GO:GO:0051301 GO:GO:0051260 GO:GO:0005815 GO:GO:0007049
Pfam:PF04212 eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 HOGENOM:HOG000225146 KO:K13254
HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502 EMBL:CR760974
EMBL:BC123973 RefSeq:NP_001016453.1 UniGene:Str.10574
ProteinModelPortal:Q05AS3 SMR:Q05AS3 STRING:Q05AS3
Ensembl:ENSXETT00000057121 GeneID:549207 KEGG:xtr:549207
Xenbase:XB-GENE-947839 Bgee:Q05AS3 Uniprot:Q05AS3
Length = 603
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 35/88 (39%), Positives = 47/88 (53%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LAK +A N F A +LT YVGE E ++ L + A
Sbjct: 365 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK-YVGE-GEKLVRALFSVA----R 418
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVS 253
Q I++IDEVD ++ E R D S
Sbjct: 419 ELQPSIIFIDEVDSLL-CERREGEHDAS 445
>DICTYBASE|DDB_G0276153 [details] [associations]
symbol:nsfA "N-ethylmaleimide-sensitive fusion
protein" species:44689 "Dictyostelium discoideum" [GO:0006928
"cellular component movement" evidence=IMP] [GO:0006897
"endocytosis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0276153 GO:GO:0005524 GO:GO:0016020
GO:GO:0046872 GO:GO:0015031 GO:GO:0006909 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0006928 GO:GO:0010008 GO:GO:0006935
GO:GO:0030659 HSSP:Q01853 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 KO:K06027 OMA:MTSGQRV
EMBL:AF006826 RefSeq:XP_643273.1 ProteinModelPortal:Q75JI3
IntAct:Q75JI3 STRING:Q75JI3 EnsemblProtists:DDB0185052
GeneID:8620316 KEGG:ddi:DDB_G0276153 Uniprot:Q75JI3
Length = 738
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 34/110 (30%), Positives = 60/110 (54%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVN--VPFTITDATALTQAGYVGEDAESVLYKLLAAADFD 223
+LL GP G+GKTL+A+ + +++N P ++ + L + YVG+ E++ ++L D +
Sbjct: 260 MLLYGPPGTGKTLIARQIGKMLNGREPKVVSGPSILNK--YVGQSEENI--RMLFR-DAE 314
Query: 224 VEAAQRG------IVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEG 267
+E +G I+ DE+D I K+ G G+ V LL M++G
Sbjct: 315 IEQKAKGDDSGLHIIIFDELDAICKSRGSRQGDSGVGDSVVNQLLAMIDG 364
>UNIPROTKB|E2RDF7 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
NextBio:20856540 Uniprot:E2RDF7
Length = 980
Score = 127 (49.8 bits), Expect = 0.00020, P = 0.00020
Identities = 39/117 (33%), Positives = 60/117 (51%)
Query: 153 VENDEIVEL--EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAE 210
+E+ E++ L +S +LL GP G+GKTLLAK +A ++ F L YVG+ E
Sbjct: 725 LEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINM-YVGQSEE 783
Query: 211 SVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEG 267
+V ++ A A AA I++ DE+D + + RN + V LL L+G
Sbjct: 784 NVR-EVFARA----RAAAPCIIFFDELDSLAPSRGRNGDSGGVMDRVVSQLLAELDG 835
>UNIPROTKB|Q6PIW4 [details] [associations]
symbol:FIGNL1 "Fidgetin-like protein 1" species:9606 "Homo
sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=ISS] [GO:0046034 "ATP metabolic process"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0033687 "osteoblast proliferation" evidence=ISS]
[GO:0001649 "osteoblast differentiation" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0000287
GO:GO:0016787 GO:GO:0051726 EMBL:CH471128 eggNOG:COG0464
GO:GO:0017111 GO:GO:0001649 InterPro:IPR015415 Pfam:PF09336
GO:GO:0046034 EMBL:CH236955 EMBL:AC018705 EMBL:AK023142
EMBL:AK023411 EMBL:AL834387 EMBL:BC051867 IPI:IPI00335421
IPI:IPI00855706 RefSeq:NP_001036227.1 RefSeq:NP_071399.2
UniGene:Hs.137516 PDB:3D8B PDBsum:3D8B ProteinModelPortal:Q6PIW4
SMR:Q6PIW4 MINT:MINT-4908266 PhosphoSite:Q6PIW4 DMDM:158563967
PaxDb:Q6PIW4 PRIDE:Q6PIW4 DNASU:63979 Ensembl:ENST00000356889
Ensembl:ENST00000395556 Ensembl:ENST00000419119
Ensembl:ENST00000433017 GeneID:63979 KEGG:hsa:63979 UCSC:uc003tpb.3
CTD:63979 GeneCards:GC07M050479 HGNC:HGNC:13286 neXtProt:NX_Q6PIW4
PharmGKB:PA28148 HOGENOM:HOG000225145 HOVERGEN:HBG061204
InParanoid:Q6PIW4 OMA:QILRIQY OrthoDB:EOG4BZN21
EvolutionaryTrace:Q6PIW4 GenomeRNAi:63979 NextBio:65794
ArrayExpress:Q6PIW4 Bgee:Q6PIW4 CleanEx:HS_FIGNL1
Genevestigator:Q6PIW4 GO:GO:0033687 Uniprot:Q6PIW4
Length = 674
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTL+ K +A F A++LT +VGE E ++ L A A
Sbjct: 437 ILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSK-WVGE-GEKMVRALFAVA----R 490
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVN 271
Q +++IDE+D ++ R +G S ++ L L+G +
Sbjct: 491 CQQPAVIFIDEIDSLLS--QRGDGEHESSRRIKTEFLVQLDGATTS 534
>UNIPROTKB|I3LS61 [details] [associations]
symbol:FIGNL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0033687 "osteoblast proliferation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0051726
GO:GO:0017111 GO:GO:0001649 InterPro:IPR015415 Pfam:PF09336
GeneTree:ENSGT00570000078874 OMA:QILRIQY GO:GO:0033687
EMBL:FP565462 RefSeq:XP_003357655.1 Ensembl:ENSSSCT00000024930
GeneID:100625562 KEGG:ssc:100625562 Uniprot:I3LS61
Length = 675
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTL+ K +A F A++LT +VGE E ++ L A A
Sbjct: 438 ILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSK-WVGE-GEKMVRALFAVA----R 491
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVN 271
Q +++IDE+D ++ R +G S ++ L L+G +
Sbjct: 492 CQQPAVIFIDEIDSLLS--QRGDGEHESSRRIKTEFLVQLDGAATS 535
>UNIPROTKB|J9P4P7 [details] [associations]
symbol:FIGNL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
GeneTree:ENSGT00570000078874 CTD:63979 OMA:QILRIQY
EMBL:AAEX03011113 RefSeq:XP_540351.3 Ensembl:ENSCAFT00000005420
GeneID:483232 KEGG:cfa:483232 Uniprot:J9P4P7
Length = 676
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTL+ K +A F A++LT +VGE E ++ L A A
Sbjct: 439 ILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSK-WVGE-GEKMVRALFAVA----R 492
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVN 271
Q +++IDE+D ++ R +G S ++ L L+G +
Sbjct: 493 CQQPAVIFIDEIDSLLS--QRGDGEHESSRRIKTEFLVQLDGATTS 536
>UNIPROTKB|D2H7A7 [details] [associations]
symbol:FIGNL1 "Uncharacterized protein" species:9646
"Ailuropoda melanoleuca" [GO:0001649 "osteoblast differentiation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0033687 "osteoblast proliferation"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043066
GO:GO:0051726 GO:GO:0017111 GO:GO:0001649 InterPro:IPR015415
Pfam:PF09336 GeneTree:ENSGT00570000078874 CTD:63979
HOGENOM:HOG000225145 OMA:QILRIQY GO:GO:0033687 EMBL:ACTA01008538
EMBL:GL192551 RefSeq:XP_002917669.1 Ensembl:ENSAMET00000021115
GeneID:100475633 KEGG:aml:100475633 Uniprot:D2H7A7
Length = 676
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTL+ K +A F A++LT +VGE E ++ L A A
Sbjct: 439 ILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSK-WVGE-GEKMVRALFAVA----R 492
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVN 271
Q +++IDE+D ++ R +G S ++ L L+G +
Sbjct: 493 CQQPAVIFIDEIDSLLS--QRGDGEHESSRRIKTEFLVQLDGATTS 536
>RGD|1307112 [details] [associations]
symbol:Fignl1 "fidgetin-like 1" species:10116 "Rattus
norvegicus" [GO:0000287 "magnesium ion binding" evidence=ISS]
[GO:0001649 "osteoblast differentiation" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0016787 "hydrolase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0033687
"osteoblast proliferation" evidence=ISO;ISS] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO;ISS] [GO:0046034 "ATP
metabolic process" evidence=ISS] [GO:0051726 "regulation of cell
cycle" evidence=ISO;ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1307112 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043066
GO:GO:0000287 GO:GO:0016787 GO:GO:0051726 eggNOG:COG0464
GO:GO:0017111 GO:GO:0001649 HSSP:O75351 InterPro:IPR015415
Pfam:PF09336 GO:GO:0046034 GeneTree:ENSGT00570000078874 CTD:63979
HOGENOM:HOG000225145 HOVERGEN:HBG061204 OMA:QILRIQY
OrthoDB:EOG4BZN21 GO:GO:0033687 EMBL:AY623031 EMBL:AY623032
IPI:IPI00209030 RefSeq:NP_001011913.1 UniGene:Rn.211783
ProteinModelPortal:Q6GX84 PRIDE:Q6GX84 Ensembl:ENSRNOT00000005857
GeneID:289777 KEGG:rno:289777 UCSC:RGD:1307112 InParanoid:Q6GX84
NextBio:630320 Genevestigator:Q6GX84 Uniprot:Q6GX84
Length = 677
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00020
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTL+ K +A F A++LT +VGE E ++ L A A
Sbjct: 440 ILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSK-WVGE-GEKMVRALFAVA----R 493
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVN 271
Q +++IDE+D ++ R +G S ++ L L+G +
Sbjct: 494 CQQPAVIFIDEIDSLLS--QRGDGEHESSRRIKTEFLVQLDGATTS 537
>MGI|MGI:1890648 [details] [associations]
symbol:Fignl1 "fidgetin-like 1" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IMP] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0033687 "osteoblast proliferation"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1890648
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043066
GO:GO:0000287 GO:GO:0016787 GO:GO:0051726 eggNOG:COG0464
GO:GO:0017111 GO:GO:0001649 HSSP:O75351 InterPro:IPR015415
Pfam:PF09336 GO:GO:0046034 GeneTree:ENSGT00570000078874 CTD:63979
HOGENOM:HOG000225145 HOVERGEN:HBG061204 OMA:QILRIQY
OrthoDB:EOG4BZN21 GO:GO:0033687 EMBL:AF263914 EMBL:AK088574
EMBL:AK051874 EMBL:AK143850 EMBL:AK148994 EMBL:AL596450
EMBL:BC051942 EMBL:BC052415 IPI:IPI00331030 RefSeq:NP_001156831.1
RefSeq:NP_001156832.1 RefSeq:NP_068691.2 UniGene:Mm.236114
ProteinModelPortal:Q8BPY9 SMR:Q8BPY9 STRING:Q8BPY9
PhosphoSite:Q8BPY9 PRIDE:Q8BPY9 Ensembl:ENSMUST00000047689
Ensembl:ENSMUST00000109664 Ensembl:ENSMUST00000171080
Ensembl:ENSMUST00000171938 GeneID:60530 KEGG:mmu:60530
UCSC:uc007ias.2 InParanoid:Q8BPY9 NextBio:314957 Bgee:Q8BPY9
CleanEx:MM_FIGNL1 Genevestigator:Q8BPY9 Uniprot:Q8BPY9
Length = 683
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTL+ K +A F A++LT +VGE E ++ L A A
Sbjct: 446 ILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSK-WVGE-GEKMVRALFAVA----R 499
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVN 271
Q +++IDE+D ++ R +G S ++ L L+G +
Sbjct: 500 CQQPAVIFIDEIDSLLS--QRGDGEHESSRRIKTEFLVQLDGATTS 543
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 36/108 (33%), Positives = 53/108 (49%)
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
+ VLL GP G+GKTLLA+ +A + F + L Q Y+GE + V + A
Sbjct: 178 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEGSRMVRELFIMAR- 235
Query: 222 FDVEAAQRGIVYIDEVDKI--VKAESRNNGRDVSGEGVQQALLKMLEG 267
E A I+++DE+D I + ES + G D + LL L+G
Sbjct: 236 ---EHAP-SIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDG 279
>UNIPROTKB|Q7QBW0 [details] [associations]
symbol:spas "Spastin" species:7165 "Anopheles gambiae"
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005815 Pfam:PF04212
eggNOG:COG0464 GO:GO:0008017 HSSP:O75351 GO:GO:0008568
GO:GO:0051013 GO:GO:0005874 SMART:SM00745 EMBL:AAAB01008859
RefSeq:XP_312634.5 GeneID:1273633 KEGG:aga:AgaP_AGAP002334
VectorBase:AGAP002334 CTD:1273633 KO:K13254 OrthoDB:EOG44XGXW
PhylomeDB:Q7QBW0 HAMAP:MF_03021 Uniprot:Q7QBW0
Length = 827
Score = 125 (49.1 bits), Expect = 0.00027, P = 0.00027
Identities = 33/82 (40%), Positives = 44/82 (53%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTLLA+ +A + F A LT YVG D E ++ L A A
Sbjct: 588 LLLFGPPGNGKTLLARAVATECSATFFSISAATLTSK-YVG-DGEKLVRALFAVA----R 641
Query: 226 AAQRGIVYIDEVDKIVKAESRN 247
Q I++IDEVD ++ S N
Sbjct: 642 ELQPSIIFIDEVDSVLSERSSN 663
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 35/100 (35%), Positives = 56/100 (56%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
VLL GP G+GKTLLAK +A + F + A+A+ Y+GE A ++ ++ A A + E
Sbjct: 209 VLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVDK-YIGESAR-LIREMFAYAK-EHE 265
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKML 265
I+++DEVD I + G E +Q+ L+++L
Sbjct: 266 PC---IIFMDEVDAI-GGRRFSEGTSADRE-IQRTLMELL 300
>UNIPROTKB|B4K799 [details] [associations]
symbol:spas "Spastin" species:7230 "Drosophila mojavensis"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 GO:GO:0008017 GO:GO:0008568 GO:GO:0051013
GO:GO:0005874 EMBL:CH933806 SMART:SM00745 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 RefSeq:XP_001998762.1
EnsemblMetazoa:FBtr0174870 GeneID:6572656 KEGG:dmo:Dmoj_GI24145
FlyBase:FBgn0146868 InParanoid:B4K799 Uniprot:B4K799
Length = 765
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 33/82 (40%), Positives = 45/82 (54%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTLLA+ +A + F A +LT YVG D E ++ L A A
Sbjct: 526 LLLFGPPGNGKTLLARAVATECSATFLNISAASLTSK-YVG-DGEKLVRALFAVA----R 579
Query: 226 AAQRGIVYIDEVDKIVKAESRN 247
Q I++IDEVD ++ S N
Sbjct: 580 HLQPSIIFIDEVDSLLSERSSN 601
>UNIPROTKB|B4M0H8 [details] [associations]
symbol:spas "Spastin" species:7244 "Drosophila virilis"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 eggNOG:COG0464 GO:GO:0008017 GO:GO:0008568
GO:GO:0051013 GO:GO:0005874 EMBL:CH940650 SMART:SM00745 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 OMA:FLNISAA RefSeq:XP_002054837.1
EnsemblMetazoa:FBtr0240585 GeneID:6631192 KEGG:dvi:Dvir_GJ24660
FlyBase:FBgn0211737 InParanoid:B4M0H8 Uniprot:B4M0H8
Length = 769
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 33/82 (40%), Positives = 45/82 (54%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTLLA+ +A + F A +LT YVG D E ++ L A A
Sbjct: 530 LLLFGPPGNGKTLLARAVATECSATFLNISAASLTSK-YVG-DGEKLVRALFAVA----R 583
Query: 226 AAQRGIVYIDEVDKIVKAESRN 247
Q I++IDEVD ++ S N
Sbjct: 584 HMQPSIIFIDEVDSLLSERSSN 605
>UNIPROTKB|B3M301 [details] [associations]
symbol:spas "Spastin" species:7217 "Drosophila ananassae"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 eggNOG:COG0464 GO:GO:0008017 GO:GO:0008568
GO:GO:0051013 GO:GO:0005874 EMBL:CH902617 SMART:SM00745 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 RefSeq:XP_001953840.1
EnsemblMetazoa:FBtr0121734 GeneID:6499823 KEGG:dan:Dana_GF17034
FlyBase:FBgn0094053 InParanoid:B3M301 Uniprot:B3M301
Length = 770
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 33/82 (40%), Positives = 45/82 (54%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTLLA+ +A + F A +LT YVG D E ++ L A A
Sbjct: 531 LLLFGPPGNGKTLLARAVATECSATFLNISAASLTSK-YVG-DGEKLVRALFAVA----R 584
Query: 226 AAQRGIVYIDEVDKIVKAESRN 247
Q I++IDEVD ++ S N
Sbjct: 585 HMQPSIIFIDEVDSLLSERSSN 606
>UNIPROTKB|B4NBP4 [details] [associations]
symbol:spas "Spastin" species:7260 "Drosophila willistoni"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 eggNOG:COG0464 GO:GO:0008017 GO:GO:0008568
GO:GO:0051013 GO:GO:0005874 SMART:SM00745 EMBL:CH964232 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 OMA:FLNISAA RefSeq:XP_002070222.1
EnsemblMetazoa:FBtr0241799 GeneID:6648037 KEGG:dwi:Dwil_GK11148
FlyBase:FBgn0213159 InParanoid:B4NBP4 Uniprot:B4NBP4
Length = 777
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 33/82 (40%), Positives = 45/82 (54%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTLLA+ +A + F A +LT YVG D E ++ L A A
Sbjct: 538 LLLFGPPGNGKTLLARAVATECSATFLNISAASLTSK-YVG-DGEKLVRALFAVA----R 591
Query: 226 AAQRGIVYIDEVDKIVKAESRN 247
Q I++IDEVD ++ S N
Sbjct: 592 HMQPSIIFIDEVDSLLSERSSN 613
>UNIPROTKB|B4JII0 [details] [associations]
symbol:spas "Spastin" species:7222 "Drosophila grimshawi"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 eggNOG:COG0464 GO:GO:0008017 GO:GO:0008568
GO:GO:0051013 GO:GO:0005874 EMBL:CH916369 SMART:SM00745 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 RefSeq:XP_001989999.1
EnsemblMetazoa:FBtr0153898 GeneID:6563377 KEGG:dgr:Dgri_GH18484
FlyBase:FBgn0125951 InParanoid:B4JII0 OMA:FLNISAA Uniprot:B4JII0
Length = 782
Score = 124 (48.7 bits), Expect = 0.00032, P = 0.00032
Identities = 33/82 (40%), Positives = 45/82 (54%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTLLA+ +A + F A +LT YVG D E ++ L A A
Sbjct: 543 LLLFGPPGNGKTLLARAVATECSATFLNISAASLTSK-YVG-DGEKLVRALFAVA----R 596
Query: 226 AAQRGIVYIDEVDKIVKAESRN 247
Q I++IDEVD ++ S N
Sbjct: 597 HMQPSIIFIDEVDSLLSERSSN 618
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 125 (49.1 bits), Expect = 0.00032, P = 0.00032
Identities = 42/119 (35%), Positives = 62/119 (52%)
Query: 153 VENDEIVEL--EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAE 210
+E+ E++ L +S +LL GP G+GKTLLAK +A ++ F L YVG+ E
Sbjct: 714 LEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINM-YVGQSEE 772
Query: 211 SVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSG--EGVQQALLKMLEG 267
+V ++ A A AA I++ DE+D + A SR D G + V LL L+G
Sbjct: 773 NVR-EVFARA----RAAAPCIIFFDELDSL--APSRGRSGDSGGVMDRVVSQLLAELDG 824
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 42/119 (35%), Positives = 62/119 (52%)
Query: 153 VENDEIVEL--EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAE 210
+E+ E++ L +S +LL GP G+GKTLLAK +A ++ F L YVG+ E
Sbjct: 723 LEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINM-YVGQSEE 781
Query: 211 SVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSG--EGVQQALLKMLEG 267
+V ++ A A AA I++ DE+D + A SR D G + V LL L+G
Sbjct: 782 NVR-EVFARA----RAAAPCIIFFDELDSL--APSRGRSGDSGGVMDRVVSQLLAELDG 833
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 42/119 (35%), Positives = 62/119 (52%)
Query: 153 VENDEIVEL--EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAE 210
+E+ E++ L +S +LL GP G+GKTLLAK +A ++ F L YVG+ E
Sbjct: 723 LEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINM-YVGQSEE 781
Query: 211 SVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSG--EGVQQALLKMLEG 267
+V ++ A A AA I++ DE+D + A SR D G + V LL L+G
Sbjct: 782 NVR-EVFARA----RAAAPCIIFFDELDSL--APSRGRSGDSGGVMDRVVSQLLAELDG 833
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 42/119 (35%), Positives = 62/119 (52%)
Query: 153 VENDEIVEL--EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAE 210
+E+ E++ L +S +LL GP G+GKTLLAK +A ++ F L YVG+ E
Sbjct: 725 LEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINM-YVGQSEE 783
Query: 211 SVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSG--EGVQQALLKMLEG 267
+V ++ A A AA I++ DE+D + A SR D G + V LL L+G
Sbjct: 784 NVR-EVFARA----RAAAPCIIFFDELDSL--APSRGRSGDSGGVMDRVVSQLLAELDG 835
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 42/119 (35%), Positives = 62/119 (52%)
Query: 153 VENDEIVEL--EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAE 210
+E+ E++ L +S +LL GP G+GKTLLAK +A ++ F L YVG+ E
Sbjct: 726 LEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINM-YVGQSEE 784
Query: 211 SVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSG--EGVQQALLKMLEG 267
+V ++ A A AA I++ DE+D + A SR D G + V LL L+G
Sbjct: 785 NVR-EVFARA----RAAAPCIIFFDELDSL--APSRGRSGDSGGVMDRVVSQLLAELDG 836
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 117 (46.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 34/104 (32%), Positives = 53/104 (50%)
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
+ VLL GP G+GKTLLA+ +A + F + L Q Y+GE + V + A
Sbjct: 194 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEGSRMVRELFVMAR- 251
Query: 222 FDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKML 265
E A I+++DE+D I A + + E VQ+ +L++L
Sbjct: 252 ---EHAP-SIIFMDEIDSIGSARMESGSGNGDSE-VQRTMLELL 290
Score = 46 (21.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 397 MFSMNNVKLHFTDDALRLIAKKAMAKNT 424
MF++ ++H T + + K M K+T
Sbjct: 381 MFALRERRVHVTQEDFEMAVAKVMKKDT 408
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 117 (46.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 34/104 (32%), Positives = 53/104 (50%)
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
+ VLL GP G+GKTLLA+ +A + F + L Q Y+GE + V + A
Sbjct: 194 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIGEGSRMVRELFVMAR- 251
Query: 222 FDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKML 265
E A I+++DE+D I A + + E VQ+ +L++L
Sbjct: 252 ---EHAP-SIIFMDEIDSIGSARMESGSGNGDSE-VQRTMLELL 290
Score = 46 (21.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 397 MFSMNNVKLHFTDDALRLIAKKAMAKNT 424
MF++ ++H T + + K M K+T
Sbjct: 381 MFALRERRVHVTQEDFEMAVAKVMKKDT 408
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
Identities = 35/104 (33%), Positives = 52/104 (50%)
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
+ VLL GP G+GKTLLA+ +A + F + L Q ++GE A V + A
Sbjct: 133 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVRELFVMAR- 190
Query: 222 FDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKML 265
E A I+++DE+D I SR G VQ+ +L++L
Sbjct: 191 ---EHAP-SIIFMDEIDSI--GSSRLEGGSGGDSEVQRTMLELL 228
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 116 (45.9 bits), Expect = 0.00040, P = 0.00040
Identities = 35/104 (33%), Positives = 52/104 (50%)
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
+ VLL GP G+GKTLLA+ +A + F + L Q ++GE A V + A
Sbjct: 163 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-FIGEGARMVRELFVMAR- 220
Query: 222 FDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKML 265
E A I+++DE+D I SR G VQ+ +L++L
Sbjct: 221 ---EHAP-SIIFMDEIDSI--GSSRLEGGSGGDSEVQRTMLELL 258
>UNIPROTKB|B4G437 [details] [associations]
symbol:spas "Spastin" species:7234 "Drosophila persimilis"
[GO:0005813 "centrosome" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0008017 "microtubule binding"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051013 "microtubule severing" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0005694
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Pfam:PF04212 GO:GO:0008017 GO:GO:0008568 GO:GO:0051013
GO:GO:0005874 SMART:SM00745 EMBL:CH479179 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 RefSeq:XP_002013462.1
EnsemblMetazoa:FBtr0189009 GeneID:6588451 KEGG:dpe:Dper_GL23394
FlyBase:FBgn0160984 Uniprot:B4G437
Length = 788
Score = 123 (48.4 bits), Expect = 0.00041, P = 0.00041
Identities = 40/115 (34%), Positives = 58/115 (50%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTLLA+ +A + F A +LT YVG D E ++ L A A
Sbjct: 549 LLLFGPPGNGKTLLARAVATECSATFLNISAASLTSK-YVG-DGEKLVRALFAVA----R 602
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPR 280
Q I++IDEVD ++ R++G + ++ L +G N PD G R
Sbjct: 603 HLQPSIIFIDEVDSLLS--ERSSGEHEASRRLKTEFLVEFDGLPGN---PD-GDR 651
>UNIPROTKB|Q298L4 [details] [associations]
symbol:spas "Spastin" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0005813 "centrosome" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0008568
"microtubule-severing ATPase activity" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0051013 "microtubule severing"
evidence=ISS] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005737
GO:GO:0005813 GO:GO:0005694 GO:GO:0007399 GO:GO:0030154
GO:GO:0051301 GO:GO:0007067 EMBL:CM000070 Pfam:PF04212
eggNOG:COG0464 GO:GO:0008017 GO:GO:0008568 GO:GO:0051013
GO:GO:0005874 GenomeReviews:CM000070_GR SMART:SM00745 KO:K13254
OrthoDB:EOG44XGXW HAMAP:MF_03021 OMA:FLNISAA RefSeq:XP_001358798.1
ProteinModelPortal:Q298L4 SMR:Q298L4 GeneID:4801757
KEGG:dpo:Dpse_GA19274 FlyBase:FBgn0079271 InParanoid:Q298L4
Uniprot:Q298L4
Length = 788
Score = 123 (48.4 bits), Expect = 0.00041, P = 0.00041
Identities = 40/115 (34%), Positives = 58/115 (50%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTLLA+ +A + F A +LT YVG D E ++ L A A
Sbjct: 549 LLLFGPPGNGKTLLARAVATECSATFLNISAASLTSK-YVG-DGEKLVRALFAVA----R 602
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPR 280
Q I++IDEVD ++ R++G + ++ L +G N PD G R
Sbjct: 603 HLQPSIIFIDEVDSLLS--ERSSGEHEASRRLKTEFLVEFDGLPGN---PD-GDR 651
>UNIPROTKB|Q81VV9 [details] [associations]
symbol:BAS0081 "Negative regulator of genetic competence
ClpC/MecB" species:1392 "Bacillus anthracis" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0017111 GO:GO:0019538
Gene3D:1.10.1780.10 InterPro:IPR023150 HOGENOM:HOG000218210
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:P03815 KO:K03696
OMA:FHQLTRD RefSeq:NP_842649.1 RefSeq:YP_016685.1
RefSeq:YP_026367.1 ProteinModelPortal:Q81VV9 SMR:Q81VV9
IntAct:Q81VV9 DNASU:1085707 EnsemblBacteria:EBBACT00000012597
EnsemblBacteria:EBBACT00000016887 EnsemblBacteria:EBBACT00000023132
GeneID:1085707 GeneID:2814931 GeneID:2851161 KEGG:ban:BA_0080
KEGG:bar:GBAA_0080 KEGG:bat:BAS0081 ProtClustDB:CLSK872619
BioCyc:BANT260799:GJAJ-92-MONOMER BioCyc:BANT261594:GJ7F-94-MONOMER
Uniprot:Q81VV9
Length = 811
Score = 87 (35.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 45/141 (31%), Positives = 70/141 (49%)
Query: 126 SLQKEL--VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
SL ++L V+ +D ++G G K +E + K+N +L+G G GKT +A+ L
Sbjct: 166 SLARDLTVVARENRLDPVIGRG-KEIQRVIE--VLSRRTKNNPVLIGEPGVGKTAIAEGL 222
Query: 184 AR-IVN--VPFTITDATALTQ------AG--YVGEDAESVLYKLLAAADFDVEAAQRGIV 232
A+ IVN VP T+ D +T AG Y GE E L K++ D ++ A I+
Sbjct: 223 AQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGE-FEDRLKKVM---D-EIRQAGNIIL 277
Query: 233 YIDEVDKIVKAESRNNGRDVS 253
+IDE+ ++ A D S
Sbjct: 278 FIDELHTLIGAGGAEGAIDAS 298
Score = 84 (34.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 21/85 (24%), Positives = 41/85 (48%)
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEF+ R ++ L + + +++ N L + K+ ++LH T+ A+ IA K
Sbjct: 700 PEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNRLKEQ----EIELHLTEGAISAIADK 755
Query: 419 AMAKNTGARGLRALLENILTEAMFE 443
+ GAR LR ++ + + + E
Sbjct: 756 GFDREYGARPLRRAIQKHVEDRLSE 780
>TIGR_CMR|BA_0080 [details] [associations]
symbol:BA_0080 "negative regulator of genetic competence
ClpC/MecB" species:198094 "Bacillus anthracis str. Ames"
[GO:0003674 "molecular_function" evidence=ND] [GO:0009294 "DNA
mediated transformation" evidence=ISS] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0017111 GO:GO:0019538
Gene3D:1.10.1780.10 InterPro:IPR023150 HOGENOM:HOG000218210
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:P03815 KO:K03696
OMA:FHQLTRD RefSeq:NP_842649.1 RefSeq:YP_016685.1
RefSeq:YP_026367.1 ProteinModelPortal:Q81VV9 SMR:Q81VV9
IntAct:Q81VV9 DNASU:1085707 EnsemblBacteria:EBBACT00000012597
EnsemblBacteria:EBBACT00000016887 EnsemblBacteria:EBBACT00000023132
GeneID:1085707 GeneID:2814931 GeneID:2851161 KEGG:ban:BA_0080
KEGG:bar:GBAA_0080 KEGG:bat:BAS0081 ProtClustDB:CLSK872619
BioCyc:BANT260799:GJAJ-92-MONOMER BioCyc:BANT261594:GJ7F-94-MONOMER
Uniprot:Q81VV9
Length = 811
Score = 87 (35.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 45/141 (31%), Positives = 70/141 (49%)
Query: 126 SLQKEL--VSDHLYVDSILGSGVKSGNCNVENDEIVELEKSNVLLMGPTGSGKTLLAKTL 183
SL ++L V+ +D ++G G K +E + K+N +L+G G GKT +A+ L
Sbjct: 166 SLARDLTVVARENRLDPVIGRG-KEIQRVIE--VLSRRTKNNPVLIGEPGVGKTAIAEGL 222
Query: 184 AR-IVN--VPFTITDATALTQ------AG--YVGEDAESVLYKLLAAADFDVEAAQRGIV 232
A+ IVN VP T+ D +T AG Y GE E L K++ D ++ A I+
Sbjct: 223 AQQIVNNEVPETLRDKRVMTLDMGTVVAGTKYRGE-FEDRLKKVM---D-EIRQAGNIIL 277
Query: 233 YIDEVDKIVKAESRNNGRDVS 253
+IDE+ ++ A D S
Sbjct: 278 FIDELHTLIGAGGAEGAIDAS 298
Score = 84 (34.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 21/85 (24%), Positives = 41/85 (48%)
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEF+ R ++ L + + +++ N L + K+ ++LH T+ A+ IA K
Sbjct: 700 PEFLNRIDEIIVFHMLEKKHIQEIVTLMVNQLVNRLKEQ----EIELHLTEGAISAIADK 755
Query: 419 AMAKNTGARGLRALLENILTEAMFE 443
+ GAR LR ++ + + + E
Sbjct: 756 GFDREYGARPLRRAIQKHVEDRLSE 780
>DICTYBASE|DDB_G0287165 [details] [associations]
symbol:DDB_G0287165 "spastin-like protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0287165 GO:GO:0016021 GO:GO:0005524 GO:GO:0005737
Pfam:PF04212 eggNOG:COG0464 HSSP:O75351 GO:GO:0008568 GO:GO:0005874
EMBL:AAFI02000098 KO:K13254 HAMAP:MF_03021 RefSeq:XP_637373.1
ProteinModelPortal:Q54KQ7 SMR:Q54KQ7 EnsemblProtists:DDB0231319
GeneID:8625995 KEGG:ddi:DDB_G0287165 InParanoid:Q54KQ7 OMA:TERSSNE
ProtClustDB:CLSZ2729356 Uniprot:Q54KQ7
Length = 655
Score = 122 (48.0 bits), Expect = 0.00042, P = 0.00042
Identities = 34/106 (32%), Positives = 54/106 (50%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT++AK +A V F +++LT YVG D E ++ L A A
Sbjct: 420 LLLFGPPGNGKTMIAKAVAYESKVTFFSISSSSLTSK-YVG-DGEKLVRALFAVATH--- 474
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVN 271
Q I++IDE+D ++ S N + ++ +L +G N
Sbjct: 475 -FQPSIIFIDEIDSLLTERSSNESE--ASRRLKTEILVQFDGARTN 517
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 125 (49.1 bits), Expect = 0.00042, P = 0.00042
Identities = 37/108 (34%), Positives = 57/108 (52%)
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
++S +LL GP G+GKTLLAK +A ++ F L Y+GE +E + ++ A
Sbjct: 951 KRSGILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINM-YIGE-SEKNIREIFNKA- 1007
Query: 222 FDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSG--EGVQQALLKMLEG 267
A+ +++ DE+D + A SR NG D G + V LL L+G
Sbjct: 1008 ---RQAKPCVIFFDELDSL--APSRGNGADSGGVMDRVVSQLLAELDG 1050
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 34/100 (34%), Positives = 55/100 (55%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
VLL GP G+GKTLLAK +A + F + A+ + Y+GE A ++ ++ A A + E
Sbjct: 218 VLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDK-YIGESAR-IIREMFAYAK-EHE 274
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKML 265
I+++DEVD I + G E +Q+ L+++L
Sbjct: 275 PC---IIFMDEVDAI-GGRRFSEGTSADRE-IQRTLMELL 309
>UNIPROTKB|F1NT80 [details] [associations]
symbol:ATAD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0002092
"positive regulation of receptor internalization" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0007612 "learning" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0051967 GO:GO:0045211
GO:GO:0016887 GO:GO:0005778 GO:GO:0002092 OMA:KNENXDR
GeneTree:ENSGT00550000074823 EMBL:AADN02035172 IPI:IPI00593427
Ensembl:ENSGALT00000005787 Uniprot:F1NT80
Length = 363
Score = 117 (46.2 bits), Expect = 0.00060, P = 0.00060
Identities = 34/96 (35%), Positives = 50/96 (52%)
Query: 154 ENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVL 213
EN +++ K VLL GP G GKTL+AK A+ F + LT Y GE +
Sbjct: 119 ENSRLLQPPKG-VLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWY-GESQK--- 173
Query: 214 YKLLAAADFDVEAA-QRGIVYIDEVDKIVKAESRNN 248
LAAA F + Q I++IDE+D +++ S ++
Sbjct: 174 ---LAAAVFSLAIKLQPSIIFIDEIDSFLRSRSSSD 206
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 39/118 (33%), Positives = 54/118 (45%)
Query: 160 ELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAA 219
++ K +L GP G+GKTLLAK A NVPF + + +VG V L A
Sbjct: 130 KIPKKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM-FVGVGPARVR-DLFAL 187
Query: 220 ADFDVEAAQRGIVYIDEVDKIVKAESRNN-GRDVSGEGVQQALLKMLEG--TVVNVPI 274
A + I++IDE+D + + R N G E LL ++G T NV I
Sbjct: 188 ARKNAPC----ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVI 241
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 117 (46.2 bits), Expect = 0.00061, P = 0.00061
Identities = 37/103 (35%), Positives = 53/103 (51%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
V+L GP G+GKTLLAK +A + F + L Q Y+G D ++ +L A+ E
Sbjct: 149 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 203
Query: 226 AAQRGIVYIDEVDKI-VKAESRNNGRDVSGEGVQQALLKMLEG 267
A IV+IDE+D I K N+G + + LL L+G
Sbjct: 204 HAP-SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 245
>UNIPROTKB|E1B8F6 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
NextBio:20876581 Uniprot:E1B8F6
Length = 980
Score = 122 (48.0 bits), Expect = 0.00069, P = 0.00069
Identities = 41/119 (34%), Positives = 62/119 (52%)
Query: 153 VENDEIVEL--EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAE 210
+E+ E++ L +S +LL GP G+GKTLLAK +A ++ F L YVG+ E
Sbjct: 725 LEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINM-YVGQSEE 783
Query: 211 SVLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSG--EGVQQALLKMLEG 267
+V ++ A A AA I++ DE+D + A +R D G + V LL L+G
Sbjct: 784 NVR-EVFARA----RAAAPCIIFFDELDSL--APNRGRSGDSGGVMDRVVSQLLAELDG 835
>ZFIN|ZDB-GENE-030131-1862 [details] [associations]
symbol:fignl1 "fidgetin-like 1" species:7955
"Danio rerio" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-1862 GO:GO:0005524
eggNOG:COG0464 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
GeneTree:ENSGT00570000078874 CTD:63979 HOGENOM:HOG000225145
HOVERGEN:HBG061204 OMA:QILRIQY OrthoDB:EOG4BZN21 EMBL:BX890571
EMBL:BC162519 IPI:IPI00496465 RefSeq:NP_001122223.1
UniGene:Dr.77563 Ensembl:ENSDART00000016294
Ensembl:ENSDART00000131390 GeneID:569539 KEGG:dre:569539
NextBio:20889728 Uniprot:B3DGU1
Length = 661
Score = 120 (47.3 bits), Expect = 0.00070, P = 0.00070
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKTL+ K +A F A++LT +VGE E ++ L A A
Sbjct: 424 ILLFGPPGTGKTLIGKCIACQSGATFFSISASSLTSK-WVGE-GEKMVRALFAIA----R 477
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVN 271
Q +++IDE+D ++ R +G S ++ L L+G +
Sbjct: 478 CHQPAVIFIDEIDSLLS--QRTDGEHDSSRRIKTEFLVQLDGAATS 521
>UNIPROTKB|B4E2J1 [details] [associations]
symbol:ATAD1 "ATPase family AAA domain-containing protein
1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
HOGENOM:HOG000225141 EMBL:AL133327 EMBL:AC022016 UniGene:Hs.435948
HGNC:HGNC:25903 HOVERGEN:HBG057074 ChiTaRS:ATAD1 EMBL:AK304297
IPI:IPI00910210 SMR:B4E2J1 STRING:B4E2J1 Ensembl:ENST00000400215
UCSC:uc010qmr.1 Uniprot:B4E2J1
Length = 273
Score = 114 (45.2 bits), Expect = 0.00073, P = 0.00073
Identities = 34/96 (35%), Positives = 49/96 (51%)
Query: 154 ENDEIVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVL 213
EN +++ K VLL GP G GKTL+AK A+ F + LT Y GE +
Sbjct: 60 ENSRLLQPPKG-VLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWY-GESQK--- 114
Query: 214 YKLLAAADFDVEAA-QRGIVYIDEVDKIVKAESRNN 248
LAAA F + Q I++IDE+D ++ S ++
Sbjct: 115 ---LAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSD 147
>UNIPROTKB|Q3A9N1 [details] [associations]
symbol:CHY_2348 "Negative regulator of genetic competence
clpC/mecB" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0003674 "molecular_function" evidence=ND] [GO:0009294
"DNA mediated transformation" evidence=ISS] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0017111
GO:GO:0009294 GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 HOGENOM:HOG000218210 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 KO:K03696 OMA:QTIHYTP RefSeq:YP_361153.1
ProteinModelPortal:Q3A9N1 SMR:Q3A9N1 STRING:Q3A9N1 GeneID:3726501
KEGG:chy:CHY_2348 PATRIC:21277763
BioCyc:CHYD246194:GJCN-2347-MONOMER Uniprot:Q3A9N1
Length = 811
Score = 90 (36.7 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 21/85 (24%), Positives = 44/85 (51%)
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEF+ R ++ +L E+ L Q++ +G++ ++ +K+ F D + +I K+
Sbjct: 704 PEFLNRIDEIIVFHSLTEEHLKQIVRLMLKEVGKRLEEQ----EMKVEFDDSLIEVILKE 759
Query: 419 AMAKNTGARGLRALLENILTEAMFE 443
+ GAR LR ++ I+ + + E
Sbjct: 760 GYDEAFGARPLRRAIQKIVEDKLSE 784
Score = 78 (32.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 34/102 (33%), Positives = 51/102 (50%)
Query: 163 KSNVLLMGPTGSGKTLLAKTLA-RIVN--VPFTITDATALTQ------AG--YVGEDAES 211
K+N +L+G G GKT + + LA RIV VP + D +T AG Y GE E
Sbjct: 206 KNNPVLIGEPGVGKTAIVEGLAQRIVQKKVPEILIDKRVVTLDLASMVAGTKYRGEFEER 265
Query: 212 VLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVS 253
L K+L +++ A IV+IDE+ ++ A + D +
Sbjct: 266 -LKKVLE----EIKNAGNVIVFIDEIHTLIGAGAAEGAIDAA 302
>TIGR_CMR|CHY_2348 [details] [associations]
symbol:CHY_2348 "negative regulator of genetic competence
clpC/mecB" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0003674 "molecular_function" evidence=ND] [GO:0009294
"DNA mediated transformation" evidence=ISS] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0017111
GO:GO:0009294 GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 HOGENOM:HOG000218210 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 KO:K03696 OMA:QTIHYTP RefSeq:YP_361153.1
ProteinModelPortal:Q3A9N1 SMR:Q3A9N1 STRING:Q3A9N1 GeneID:3726501
KEGG:chy:CHY_2348 PATRIC:21277763
BioCyc:CHYD246194:GJCN-2347-MONOMER Uniprot:Q3A9N1
Length = 811
Score = 90 (36.7 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 21/85 (24%), Positives = 44/85 (51%)
Query: 359 PEFIGRFPILVSLSALNEDQLVQVLMEPKNALGRQYKKMFSMNNVKLHFTDDALRLIAKK 418
PEF+ R ++ +L E+ L Q++ +G++ ++ +K+ F D + +I K+
Sbjct: 704 PEFLNRIDEIIVFHSLTEEHLKQIVRLMLKEVGKRLEEQ----EMKVEFDDSLIEVILKE 759
Query: 419 AMAKNTGARGLRALLENILTEAMFE 443
+ GAR LR ++ I+ + + E
Sbjct: 760 GYDEAFGARPLRRAIQKIVEDKLSE 784
Score = 78 (32.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 34/102 (33%), Positives = 51/102 (50%)
Query: 163 KSNVLLMGPTGSGKTLLAKTLA-RIVN--VPFTITDATALTQ------AG--YVGEDAES 211
K+N +L+G G GKT + + LA RIV VP + D +T AG Y GE E
Sbjct: 206 KNNPVLIGEPGVGKTAIVEGLAQRIVQKKVPEILIDKRVVTLDLASMVAGTKYRGEFEER 265
Query: 212 VLYKLLAAADFDVEAAQRGIVYIDEVDKIVKAESRNNGRDVS 253
L K+L +++ A IV+IDE+ ++ A + D +
Sbjct: 266 -LKKVLE----EIKNAGNVIVFIDEIHTLIGAGAAEGAIDAA 302
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 117 (46.2 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 35/104 (33%), Positives = 51/104 (49%)
Query: 162 EKSNVLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAAD 221
+ VLL GP G+GKTLLA+ +A F + L Q ++GE A V + A
Sbjct: 192 QPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK-FIGEGARMVRELFVMAR- 249
Query: 222 FDVEAAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKML 265
E A I+++DE+D I SR G VQ+ +L++L
Sbjct: 250 ---EHAP-SIIFMDEIDSI--GSSRVEGSSGGDSEVQRTMLELL 287
Score = 42 (19.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 397 MFSMNNVKLHFTDDALRLIAKKAMAKNT 424
MF++ ++H T + + K M K++
Sbjct: 378 MFALRERRIHVTQEDFEMAVGKVMQKDS 405
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 117 (46.2 bits), Expect = 0.00082, P = 0.00082
Identities = 37/103 (35%), Positives = 53/103 (51%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
V+L GP G+GKTLLAK +A + F + L Q Y+G D ++ +L A+ E
Sbjct: 220 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 274
Query: 226 AAQRGIVYIDEVDKI-VKAESRNNGRDVSGEGVQQALLKMLEG 267
A IV+IDE+D I K N+G + + LL L+G
Sbjct: 275 HAP-SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 316
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 117 (46.2 bits), Expect = 0.00082, P = 0.00082
Identities = 37/103 (35%), Positives = 53/103 (51%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
V+L GP G+GKTLLAK +A + F + L Q Y+G D ++ +L A+ E
Sbjct: 221 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 275
Query: 226 AAQRGIVYIDEVDKI-VKAESRNNGRDVSGEGVQQALLKMLEG 267
A IV+IDE+D I K N+G + + LL L+G
Sbjct: 276 HAP-SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 317
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 37/103 (35%), Positives = 53/103 (51%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
V+L GP G+GKTLLAK +A + F + L Q Y+G D ++ +L A+ E
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 276
Query: 226 AAQRGIVYIDEVDKI-VKAESRNNGRDVSGEGVQQALLKMLEG 267
A IV+IDE+D I K N+G + + LL L+G
Sbjct: 277 HAP-SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 318
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 37/103 (35%), Positives = 53/103 (51%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
V+L GP G+GKTLLAK +A + F + L Q Y+G D ++ +L A+ E
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 276
Query: 226 AAQRGIVYIDEVDKI-VKAESRNNGRDVSGEGVQQALLKMLEG 267
A IV+IDE+D I K N+G + + LL L+G
Sbjct: 277 HAP-SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 318
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 37/103 (35%), Positives = 53/103 (51%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
V+L GP G+GKTLLAK +A + F + L Q Y+G D ++ +L A+ E
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 276
Query: 226 AAQRGIVYIDEVDKI-VKAESRNNGRDVSGEGVQQALLKMLEG 267
A IV+IDE+D I K N+G + + LL L+G
Sbjct: 277 HAP-SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 318
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 37/103 (35%), Positives = 53/103 (51%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
V+L GP G+GKTLLAK +A + F + L Q Y+G D ++ +L A+ E
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 276
Query: 226 AAQRGIVYIDEVDKI-VKAESRNNGRDVSGEGVQQALLKMLEG 267
A IV+IDE+D I K N+G + + LL L+G
Sbjct: 277 HAP-SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 318
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 37/103 (35%), Positives = 53/103 (51%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
V+L GP G+GKTLLAK +A + F + L Q Y+G D ++ +L A+ E
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 276
Query: 226 AAQRGIVYIDEVDKI-VKAESRNNGRDVSGEGVQQALLKMLEG 267
A IV+IDE+D I K N+G + + LL L+G
Sbjct: 277 HAP-SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 318
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 37/103 (35%), Positives = 53/103 (51%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
V+L GP G+GKTLLAK +A + F + L Q Y+G D ++ +L A+ E
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK-YLG-DGPKLVRELFRVAE---E 276
Query: 226 AAQRGIVYIDEVDKI-VKAESRNNGRDVSGEGVQQALLKMLEG 267
A IV+IDE+D I K N+G + + LL L+G
Sbjct: 277 HAP-SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 318
>POMBASE|SPAC1834.11c [details] [associations]
symbol:sec18 "secretory pathway protein Sec18
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 PomBase:SPAC1834.11c Pfam:PF02359 GO:GO:0005524
GO:GO:0005737 GO:GO:0006886 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 eggNOG:COG0464 GO:GO:0006888 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042144 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 PIR:T50122 RefSeq:NP_594690.1
ProteinModelPortal:Q9P7Q4 STRING:Q9P7Q4 EnsemblFungi:SPAC1834.11c.1
GeneID:2542410 KEGG:spo:SPAC1834.11c OrthoDB:EOG4PVS6W
NextBio:20803469 Uniprot:Q9P7Q4
Length = 792
Score = 120 (47.3 bits), Expect = 0.00088, P = 0.00088
Identities = 35/108 (32%), Positives = 56/108 (51%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNV--PFTITDATALTQAGYVGEDAESVLYKLLAAADFD 223
+LL GP G+GKTL+A+ + +++N P + L + YVG+ E+V KL A A+ +
Sbjct: 307 ILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNK--YVGQSEENVR-KLFADAERE 363
Query: 224 VE--AAQRG--IVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEG 267
+ G I+ DE+D I K + G G+ V LL ++G
Sbjct: 364 YRDRGEESGLHIIIFDELDAICKKRGSSGGDTGVGDQVVNQLLAKMDG 411
>POMBASE|SPBC947.01 [details] [associations]
symbol:alf1 "ATP-dependent microtubule severing protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0001578
"microtubule bundle formation" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISM] [GO:0032153 "cell
division site" evidence=IDA] [GO:0051013 "microtubule severing"
evidence=ISS] [GO:0051286 "cell tip" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC947.01
GO:GO:0005524 GO:GO:0005634 GO:GO:0032153 GO:GO:0051286
EMBL:CU329671 GenomeReviews:CU329671_GR eggNOG:COG0464 PIR:T40781
RefSeq:NP_595275.1 HSSP:O75351 ProteinModelPortal:O43078 SMR:O43078
EnsemblFungi:SPBC947.01.1 GeneID:2541249 KEGG:spo:SPBC947.01
OrthoDB:EOG44TSHD NextBio:20802361 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 Uniprot:O43078
Length = 660
Score = 119 (46.9 bits), Expect = 0.00089, P = 0.00089
Identities = 36/120 (30%), Positives = 61/120 (50%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
+LL GP G+GKT+LA+ +A F A++LT Y+G D+E KL+ A F+V
Sbjct: 415 MLLFGPPGTGKTMLARAVATEAKATFFSISASSLTSK-YLG-DSE----KLVRAL-FEVA 467
Query: 226 AAQR-GIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPR 284
Q ++++DE+D I+ A + + S ++ L ++ + + PD PR
Sbjct: 468 KRQTCSVIFVDEIDSILSARNDSGNEHESSRRLKTEFL--IQWSSLTNAAPDKQTGHSPR 525
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 119 (46.9 bits), Expect = 0.00098, P = 0.00098
Identities = 37/100 (37%), Positives = 56/100 (56%)
Query: 166 VLLMGPTGSGKTLLAKTLARIVNVPFTITDATALTQAGYVGEDAESVLYKLLAAADFDVE 225
VLL GP G+GKT+LA+ +A NVPF + + YVG A+ V +L AAA
Sbjct: 303 VLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEM-YVGVGAKRVR-ELFAAARKQAP 360
Query: 226 AAQRGIVYIDEVDKIVKAESRNNGRDVSGEGVQQALLKML 265
+ I++IDE+D I + + N RD + ++Q L ++L
Sbjct: 361 S----IIFIDELDAIGQ---KRNARDAAH--MRQTLNQLL 391
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.137 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 510 492 0.00082 119 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 128
No. of states in DFA: 601 (64 KB)
Total size of DFA: 244 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.65u 0.14s 40.79t Elapsed: 00:00:02
Total cpu time: 40.67u 0.14s 40.81t Elapsed: 00:00:02
Start: Fri May 10 13:05:15 2013 End: Fri May 10 13:05:17 2013
WARNINGS ISSUED: 1